Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 688:b58f639aee60
added tests for limit=0
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 11 Sep 2024 21:20:48 +0200 |
| parents | edf6ce075823 |
| children | 870fcd19560f |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2023 Osimis S.A., Belgium |
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9 # Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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10 # Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 11 # |
| 12 # This program is free software: you can redistribute it and/or | |
| 13 # modify it under the terms of the GNU General Public License as | |
| 14 # published by the Free Software Foundation, either version 3 of the | |
| 15 # License, or (at your option) any later version. | |
| 16 # | |
| 17 # This program is distributed in the hope that it will be useful, but | |
| 18 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 19 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 20 # General Public License for more details. | |
| 21 # | |
| 22 # You should have received a copy of the GNU General Public License | |
| 23 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 24 | |
| 25 | |
|
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26 import base64 |
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27 import bz2 |
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28 import copy |
| 440 | 29 import io |
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30 import numpy |
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31 import pprint |
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32 import shutil |
| 14 | 33 import tempfile |
| 3 | 34 import unittest |
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35 import time |
| 529 | 36 import os |
| 3 | 37 |
| 11 | 38 from PIL import ImageChops |
| 3 | 39 from Toolbox import * |
| 13 | 40 from xml.dom import minidom |
| 312 | 41 from datetime import datetime |
| 3 | 42 |
| 43 _LOCAL = None | |
| 44 _REMOTE = None | |
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45 _DOCKER = False |
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46 |
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47 |
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48 def SetOrthancParameters(local, remote, withinDocker): |
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49 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 50 _LOCAL = local |
| 51 _REMOTE = remote | |
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52 _DOCKER = withinDocker |
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53 |
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54 |
| 14 | 55 def ExtractDicomTags(rawDicom, tags): |
| 56 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 57 f.write(rawDicom) | |
| 58 f.flush() | |
| 45 | 59 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 60 |
| 61 result = [] | |
| 62 for tag in tags: | |
| 63 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 64 if match == None: | |
| 65 result.append('') | |
| 66 else: | |
| 67 result.append(match.group(1)) | |
| 68 | |
| 69 return result | |
| 70 | |
| 71 | |
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72 def CompareLists(a, b): |
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73 if len(a) != len(b): |
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74 return False |
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75 |
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76 for i in range(len(a)): |
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77 d = a[i] - b[i] |
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78 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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79 return False |
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80 |
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81 return True |
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82 |
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83 |
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84 def CompareTags(a, b, tagsToIgnore): |
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85 for i in tagsToIgnore: |
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86 if i in a: |
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87 del a[i] |
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88 if i in b: |
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89 del b[i] |
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90 |
| 123 | 91 if a.keys() == b.keys(): |
| 92 return True | |
| 93 else: | |
| 94 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 95 return False | |
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96 |
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97 |
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98 def CallFindScu(args): |
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99 p = subprocess.Popen([ FindExecutable('findscu'), |
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100 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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101 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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102 stderr=subprocess.PIPE) |
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103 return p.communicate()[1] |
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104 |
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105 |
| 142 | 106 def GetMoveScuCommand(): |
| 107 return [ | |
| 108 FindExecutable('movescu'), | |
| 109 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 110 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 111 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 112 _REMOTE['Server'], | |
| 113 str(_REMOTE['DicomPort']) | |
| 114 ] | |
| 115 | |
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116 |
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117 def IsDicomUntilPixelDataStored(orthanc): |
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118 # This function detects whether the "StorageCompression" option is |
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119 # "true", OR the storage area does not support read-range |
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120 |
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121 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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122 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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123 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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124 if a != 0x03a0: |
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125 raise Exception('Internal error') |
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126 |
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127 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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128 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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129 raise Exception('Internal error') |
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130 |
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131 DoDelete(orthanc, '/instances/%s' % i) |
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132 |
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133 if len(a) == 1: |
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134 return False |
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135 elif 'dicom-until-pixel-data' in a: |
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136 return True |
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137 else: |
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138 raise Exception('Internal error') |
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139 |
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140 else: |
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141 return False |
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142 |
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143 |
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144 def CallMoveScu(args): |
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145 try: |
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146 subprocess.check_call(GetMoveScuCommand() + args, |
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147 stderr = subprocess.PIPE) |
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148 except subprocess.CalledProcessError as e: |
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149 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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150 # that has been introduced in DCMTK 3.6.2. This error code is |
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151 # expected by some tests that try and C-MOVE non-existing |
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152 # DICOM instances. |
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153 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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154 if e.returncode != 69: |
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155 raise e |
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156 |
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157 |
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158 def GenerateTestSequence(): |
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159 return [ |
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160 { |
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161 'StudyDescription': 'Hello^', |
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162 'ReferencedStudySequence' : [ |
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163 { |
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164 'StudyDescription': 'Toto', |
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165 }, |
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166 { |
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167 'StudyDescription': 'Tata', |
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168 }, |
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169 ] |
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170 }, |
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171 { |
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172 'StudyDescription': 'Sébastien^', |
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173 'StudyDate' : '19700202', |
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174 } |
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175 ] |
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176 |
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177 |
| 3 | 178 class Orthanc(unittest.TestCase): |
| 179 def setUp(self): | |
| 83 | 180 if (sys.version_info >= (3, 0)): |
| 181 # Remove annoying warnings about unclosed socket in Python 3 | |
| 182 import warnings | |
| 183 warnings.simplefilter("ignore", ResourceWarning) | |
| 184 | |
| 508 | 185 print('running : %s' % self.id()) |
| 186 | |
| 3 | 187 DropOrthanc(_LOCAL) |
| 188 DropOrthanc(_REMOTE) | |
| 174 | 189 UninstallLuaCallbacks(_REMOTE) |
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190 |
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191 # Reset stuff possibly set by some integration tests |
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192 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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193 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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194 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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195 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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196 |
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197 for i in [ 'toto', 'tata' ]: |
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198 if i in DoGet(_REMOTE, '/modalities'): |
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199 DoDelete(_REMOTE, '/modalities/%s' % i) |
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200 if i in DoGet(_REMOTE, '/peers'): |
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201 DoDelete(_REMOTE, '/peers/%s' % i) |
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202 |
| 312 | 203 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
|
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204 |
|
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205 def AssertSameImages(self, truth, url): |
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206 im = GetImage(_REMOTE, url) |
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207 self.assertTrue(CompareLists(truth, im.getdata())) |
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208 |
| 3 | 209 |
| 210 def test_system(self): | |
| 177 | 211 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 212 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 213 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 214 | |
| 512 | 215 systemInfo = DoGet(_REMOTE, '/system') |
| 216 | |
| 471 | 217 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 512 | 218 self.assertIn("MainDicomTags", systemInfo) |
| 219 self.assertIn("Patient", systemInfo["MainDicomTags"]) | |
| 220 self.assertIn("Study", systemInfo["MainDicomTags"]) | |
| 221 self.assertIn("Series", systemInfo["MainDicomTags"]) | |
| 222 self.assertIn("Instance", systemInfo["MainDicomTags"]) | |
| 223 | |
| 224 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 225 self.assertIn("UserMetadata", systemInfo) | |
| 226 self.assertEqual(1098, systemInfo['UserMetadata']['my-metadata'] ) | |
| 227 | |
| 177 | 228 if systemInfo["Version"] == "mainline": |
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229 print("Skipping version checks since you're currently in mainline") |
| 177 | 230 return |
| 231 | |
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232 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 7): |
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233 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
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234 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) |
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235 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) |
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236 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) |
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237 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) |
| 3 | 238 |
| 456 | 239 |
| 512 | 240 |
| 3 | 241 def test_upload(self): |
| 173 | 242 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 243 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 244 | |
| 245 sizeDummyCT = 2472 | |
| 246 sizeOverwrite = 2476 | |
| 247 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 248 | |
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249 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 250 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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251 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 252 self.assertEqual(instance, u['ID']) |
| 3 | 253 self.assertEqual('Success', u['Status']) |
| 173 | 254 |
| 183 | 255 if True: |
| 256 # New test for Orthanc 1.4.3 | |
| 257 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 258 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 259 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 260 | |
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261 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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262 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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263 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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264 j = 0 |
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265 else: |
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266 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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267 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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268 |
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269 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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270 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 271 |
| 272 if isCompressed: | |
| 273 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 274 else: | |
| 275 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 276 | |
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277 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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278 self.assertIn('Uuid', attachmentInfo) |
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279 self.assertEqual(1, attachmentInfo['ContentType']) |
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280 |
| 173 | 281 s = sizeDummyCT + j |
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282 |
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283 if isCompressed: |
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284 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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285 else: |
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286 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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287 |
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288 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 289 |
| 3 | 290 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 291 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 292 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 293 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 294 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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295 |
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296 if isCompressed: |
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297 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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298 else: |
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299 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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300 |
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301 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 302 |
| 303 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 304 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 305 self.assertEqual('KNIX', i['PatientName']) |
| 306 | |
| 307 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 308 # Overwriting | |
| 309 self.assertEqual('Success', u['Status']) | |
| 310 else: | |
| 311 self.assertEqual('AlreadyStored', u['Status']) | |
| 312 | |
| 313 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 314 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 315 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 316 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 317 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 318 | |
| 319 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 320 # Overwriting | |
| 321 self.assertEqual('Success', u['Status']) | |
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322 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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323 j2 = 0 |
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324 else: |
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325 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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326 self.assertNotEqual(j, j2) |
| 173 | 327 s2 = sizeOverwrite + j2 |
| 328 self.assertNotEqual(s, s2) | |
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329 if isCompressed: |
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330 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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331 else: |
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332 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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333 |
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334 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 335 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 336 self.assertEqual('ANOTHER', i['PatientName']) | |
| 337 else: | |
| 338 self.assertEqual('AlreadyStored', u['Status']) | |
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339 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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340 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 341 |
| 5 | 342 def test_upload_2(self): |
| 3 | 343 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 344 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 345 self.assertEqual(i, instance['ID']) | |
| 346 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 347 instance['MainDicomTags']['SOPInstanceUID']) | |
| 348 | |
| 349 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 350 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 351 series['MainDicomTags']['SeriesInstanceUID']) | |
| 352 | |
| 353 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 354 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 355 study['MainDicomTags']['StudyInstanceUID']) | |
| 356 | |
| 357 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 358 self.assertEqual('ozp00SjY2xG', | |
| 359 patient['MainDicomTags']['PatientID']) | |
| 360 | |
| 361 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 362 self.assertEqual(2472, len(dicom)) | |
| 363 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 364 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 365 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 366 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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367 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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368 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 369 |
| 370 | |
| 5 | 371 def test_images(self): |
| 372 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 373 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 374 |
| 5 | 375 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 376 self.assertEqual("L", im.mode) | |
| 377 self.assertEqual(512, im.size[0]) | |
| 378 self.assertEqual(358, im.size[1]) | |
| 379 | |
| 380 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 381 self.assertEqual("L", im.mode) | |
| 382 self.assertEqual(512, im.size[0]) | |
| 383 self.assertEqual(358, im.size[1]) | |
| 384 | |
| 385 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 386 self.assertEqual(512, im.size[0]) | |
| 387 self.assertEqual(358, im.size[1]) | |
| 388 | |
| 389 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 390 self.assertEqual("L", im.mode) | |
| 391 self.assertEqual(512, im.size[0]) | |
| 392 self.assertEqual(358, im.size[1]) | |
| 393 | |
| 394 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 395 self.assertEqual("L", im.mode) | |
| 396 self.assertEqual(512, im.size[0]) | |
| 397 self.assertEqual(358, im.size[1]) | |
| 398 | |
| 399 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 400 self.assertEqual(512, im.size[0]) | |
| 401 self.assertEqual(358, im.size[1]) | |
| 64 | 402 |
| 403 # This is Little Endian Explicit | |
| 404 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 405 | |
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406 def test_images_implicit_vr(self): |
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407 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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408 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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409 |
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410 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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411 self.assertEqual("RGB", im.mode) |
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412 self.assertEqual(800, im.size[0]) |
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413 self.assertEqual(600, im.size[1]) |
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414 |
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415 |
| 6 | 416 def test_hierarchy(self): |
| 417 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 418 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 419 UploadFolder(_REMOTE, 'Knee/T1') | |
| 420 UploadFolder(_REMOTE, 'Knee/T2') | |
| 421 | |
| 422 p = DoGet(_REMOTE, '/patients') | |
| 423 s = DoGet(_REMOTE, '/studies') | |
| 424 t = DoGet(_REMOTE, '/series') | |
| 425 self.assertEqual(2, len(p)) | |
| 426 self.assertEqual(2, len(s)) | |
| 427 self.assertEqual(4, len(t)) | |
| 428 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 429 | |
| 430 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 431 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 432 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 433 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 434 | |
| 435 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 436 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 437 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 438 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 439 | |
| 440 self.assertTrue(brainixPatient in p) | |
| 441 self.assertTrue(kneePatient in p) | |
| 442 self.assertTrue(brainixStudy in s) | |
| 443 self.assertTrue(kneeStudy in s) | |
| 444 self.assertTrue(brainixEpi in t) | |
| 445 self.assertTrue(brainixFlair in t) | |
| 446 self.assertTrue(kneeT1 in t) | |
| 447 self.assertTrue(kneeT2 in t) | |
| 448 | |
| 449 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 450 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 451 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 452 | |
| 453 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 454 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 455 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 456 | |
| 457 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 458 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 459 | |
| 460 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 461 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 462 | |
| 463 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 464 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 465 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 466 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 467 | |
| 468 for patient in p: | |
| 469 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 470 self.assertEqual(patient, study['ParentPatient']) | |
| 471 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 472 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 473 self.assertEqual('Unknown', series['Status']) |
| 6 | 474 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 475 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 476 | |
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477 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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478 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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479 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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480 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 481 |
| 482 | |
| 483 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 484 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 485 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 486 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 487 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 488 self.assertEqual(None, r) | |
| 489 | |
| 490 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 491 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 492 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 493 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 494 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 495 self.assertEqual('Study', r['Type']) | |
| 496 self.assertEqual(kneeStudy, r['ID']) | |
| 497 | |
| 498 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 499 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 500 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 501 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 502 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 503 self.assertEqual('Series', r['Type']) | |
| 504 self.assertEqual(kneeT1, r['ID']) | |
| 505 | |
| 506 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 507 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 508 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 509 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 510 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 511 self.assertEqual(None, r) | |
| 512 | |
| 513 DropOrthanc(_REMOTE) | |
| 514 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 515 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 516 |
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517 def test_delete_cascade(self): |
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518 # make sure deleting the last instance of a study deletes the series, study and patient |
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519 |
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520 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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521 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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522 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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523 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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524 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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525 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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526 |
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527 DoDelete(_REMOTE, '/instances/%s' % a) |
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528 |
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529 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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530 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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531 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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532 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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533 |
| 7 | 534 |
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535 def test_multiframe(self): |
| 7 | 536 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 537 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 538 | |
| 539 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 540 self.assertEqual("L", im.mode) | |
| 541 self.assertEqual(512, im.size[0]) | |
| 542 self.assertEqual(512, im.size[1]) | |
| 543 | |
| 544 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 545 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 546 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 547 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 548 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 549 | |
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550 |
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551 def test_changes(self): |
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552 # Check emptiness |
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553 c = DoGet(_REMOTE, '/changes') |
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554 self.assertEqual(0, len(c['Changes'])) |
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555 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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556 self.assertTrue(c['Done']) |
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557 c = DoGet(_REMOTE, '/changes?last') |
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558 self.assertEqual(0, len(c['Changes'])) |
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559 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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560 self.assertTrue(c['Done']) |
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561 |
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562 # Add 1 instance |
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563 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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564 c = DoGet(_REMOTE, '/changes') |
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565 begin = c['Last'] |
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566 self.assertEqual(4, len(c['Changes'])) |
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567 self.assertTrue(c['Done']) |
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568 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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569 |
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570 # Check the order in which the creation events are reported |
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571 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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572 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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573 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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574 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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575 |
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576 c = DoGet(_REMOTE, '/changes?last') |
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577 self.assertEqual(1, len(c['Changes'])) |
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578 self.assertEqual(begin, c['Last']) |
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579 self.assertTrue(c['Done']) |
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580 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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581 self.assertEqual(1, len(c['Changes'])) |
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582 self.assertEqual(begin, c['Last']) |
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583 self.assertTrue(c['Done']) |
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584 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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585 self.assertEqual(1, len(c['Changes'])) |
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586 self.assertEqual(begin - 1, c['Last']) |
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587 self.assertFalse(c['Done']) |
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588 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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589 self.assertEqual(1, len(c['Changes'])) |
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590 self.assertEqual(begin - 2, c['Last']) |
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591 self.assertFalse(c['Done']) |
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592 |
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593 UploadFolder(_REMOTE, 'Knee/T1') |
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594 UploadFolder(_REMOTE, 'Knee/T2') |
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595 since = begin |
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596 countPatients = 0 |
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597 countStudies = 0 |
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598 countSeries = 0 |
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599 countInstances = 0 |
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600 completed = 0 |
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601 while True: |
| 530 | 602 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 1000 }) |
|
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603 since = c['Last'] |
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604 for i in c['Changes']: |
| 530 | 605 # We have set StableAge to 1 -> we might have StabeStudy but this is not sure -> detect only the 'New' events |
| 606 | |
| 607 if i['ResourceType'] == 'Instance' and i['ChangeType'] == 'NewInstance': | |
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608 countInstances += 1 |
| 530 | 609 if i['ResourceType'] == 'Patient' and i['ChangeType'] == 'NewPatient': |
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610 countPatients += 1 |
| 530 | 611 if i['ResourceType'] == 'Study' and i['ChangeType'] == 'NewStudy': |
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612 countStudies += 1 |
| 530 | 613 if i['ResourceType'] == 'Series' and i['ChangeType'] == 'NewSeries': |
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614 countSeries += 1 |
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615 if i['ChangeType'] == 'CompletedSeries': |
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616 completed += 1 |
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617 self.assertTrue('ID' in i) |
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618 self.assertTrue('Path' in i) |
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619 self.assertTrue('Seq' in i) |
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620 if c['Done']: |
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621 break |
| 530 | 622 # we count only the events since before the upload of 2 Knee series ! |
| 623 self.assertEqual(50, countInstances) | |
| 624 self.assertEqual(1, countPatients) | |
| 625 self.assertEqual(1, countStudies) | |
| 626 self.assertEqual(2, countSeries) | |
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627 self.assertEqual(0, completed) |
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628 |
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629 |
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630 def test_changes_extended(self): |
| 681 | 631 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5) and DoGet(_REMOTE, '/system').get("Capabilities") and DoGet(_REMOTE, '/system').get("Capabilities").get("HasExtendedChanges"): |
|
644
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632 # Check emptiness |
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633 c = DoGet(_REMOTE, '/changes') |
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634 self.assertEqual(0, len(c['Changes'])) |
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635 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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636 self.assertTrue(c['Done']) |
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637 c = DoGet(_REMOTE, '/changes?last') |
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638 self.assertEqual(0, len(c['Changes'])) |
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639 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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640 self.assertTrue(c['Done']) |
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641 |
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642 # Add 1 instance |
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643 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
677
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644 c = DoGet(_REMOTE, '/changes') |
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645 begin = c['Last'] |
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646 self.assertEqual(4, len(c['Changes'])) |
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647 self.assertTrue(c['Done']) |
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648 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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649 |
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650 # Check the order in which the creation events are reported |
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651 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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652 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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653 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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654 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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655 |
|
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656 c = DoGet(_REMOTE, '/changes?type=NewInstance') |
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657 self.assertEqual(1, len(c['Changes'])) |
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658 self.assertEqual(begin-3, c['Last']) |
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659 |
|
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660 c = DoGet(_REMOTE, '/changes?type=NewPatient') |
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661 self.assertEqual(1, len(c['Changes'])) |
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662 self.assertEqual(begin, c['Last']) |
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663 |
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664 UploadFolder(_REMOTE, 'Knee/T1') |
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665 UploadFolder(_REMOTE, 'Knee/T2') |
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666 |
|
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667 # Request the 1000 first NewInstance changes -> all 50 shall be reported |
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668 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'limit' : 1000 }) |
|
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669 self.assertEqual(50, len(c['Changes'])) |
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670 self.assertLess(begin, c['Changes'][0]['Seq']) |
|
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671 self.assertTrue(c['Done']) #w e have got them all so it's DONE |
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672 lastFrom1000NewInstances = c['Last'] |
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673 firstFrom1000NewInstances = c['First'] |
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674 self.assertLess(firstFrom1000NewInstances, lastFrom1000NewInstances) |
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675 |
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676 # Only the 10 first NewInstance changes -> only 10 shall be reported |
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677 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'limit' : 10 }) |
|
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678 self.assertEqual(10, len(c['Changes'])) |
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679 self.assertFalse(c['Done']) |
|
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680 lastFrom10firstNewInstances = c['Last'] |
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681 firstFrom10firstNewInstances = c['First'] |
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682 self.assertLess(firstFrom10firstNewInstances, lastFrom10firstNewInstances) |
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683 self.assertLess(lastFrom10firstNewInstances, lastFrom1000NewInstances) |
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684 self.assertEqual(firstFrom10firstNewInstances, firstFrom1000NewInstances) |
|
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|
685 |
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686 # between begin and begin+10 with a max of 10 and a filter -> less than 10 NewInstance since there are other changes in this range |
|
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687 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'to': begin+10, 'limit' : 10 }) |
|
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688 self.assertLess(len(c['Changes']), 10) |
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689 self.assertTrue(c['Done']) # we have received ALL NewInstance that are between since and to so we consider it's done |
|
677
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690 lastFrom10SubsetNewInstances = c['Last'] |
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691 firstFrom10SubsetNewInstances = c['First'] |
|
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692 self.assertLess(firstFrom10SubsetNewInstances, lastFrom10SubsetNewInstances) |
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693 self.assertLess(lastFrom10SubsetNewInstances, lastFrom10firstNewInstances) |
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694 self.assertEqual(firstFrom10SubsetNewInstances, firstFrom1000NewInstances) |
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|
695 |
|
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|
696 # test with only 'to' -> all 50 NewInstance shall be reported |
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697 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'to': lastFrom1000NewInstances, 'limit' : 50 }) |
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698 self.assertEqual(lastFrom1000NewInstances, c['Changes'][-1]['Seq']) |
|
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|
699 self.assertEqual(50, len(c['Changes'])) |
|
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700 self.assertFalse(c['Done']) # Done can not be used when working in reverse direction |
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|
701 lastFrom50Reverse = c['Last'] |
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|
702 firstFrom50Reverse = c['First'] |
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|
703 self.assertLess(firstFrom50Reverse, lastFrom50Reverse) |
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704 self.assertEqual(lastFrom50Reverse, lastFrom1000NewInstances) |
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705 self.assertEqual(firstFrom50Reverse, firstFrom1000NewInstances) |
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|
706 |
|
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|
707 # test with only 'to' and limit to 10 NewInstance changes |
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|
708 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'to': lastFrom1000NewInstances, 'limit' : 10 }) |
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709 self.assertEqual(lastFrom1000NewInstances, c['Changes'][-1]['Seq']) |
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710 self.assertEqual(10, len(c['Changes'])) |
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|
711 self.assertFalse(c['Done']) # Done can not be used when working in reverse direction |
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|
712 lastFrom10Reverse = c['Last'] |
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|
713 firstFrom10Reverse = c['First'] |
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|
714 self.assertLess(firstFrom10Reverse, lastFrom10Reverse) |
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715 self.assertEqual(lastFrom10Reverse, lastFrom1000NewInstances) |
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716 self.assertLessEqual(firstFrom50Reverse, firstFrom10Reverse) |
|
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717 |
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|
718 |
|
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|
719 def test_archive(self): |
|
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720 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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721 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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722 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
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723 kneeStudy = DoGet(_REMOTE, '/studies')[0] |
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724 kneeSeries = DoGet(_REMOTE, '/series')[0] |
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|
725 |
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|
726 z = GetArchive(_REMOTE, '/patients/%s/archive' % kneePatient) |
|
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727 self.assertEqual(2, len(z.namelist())) |
|
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728 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
729 |
|
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|
730 z = GetArchive(_REMOTE, '/studies/%s/archive' % kneeStudy) |
|
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|
731 self.assertEqual(2, len(z.namelist())) |
|
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732 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
733 |
|
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|
734 z = GetArchive(_REMOTE, '/series/%s/archive' % kneeSeries) |
|
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|
735 self.assertEqual(1, len(z.namelist())) |
|
583
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|
736 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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|
737 |
|
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|
738 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
739 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
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|
740 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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|
741 |
|
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|
742 z = GetArchive(_REMOTE, '/patients/%s/archive' % kneePatient) |
|
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|
743 self.assertEqual(2, len(z.namelist())) |
| 192 | 744 |
|
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|
745 # archive with 2 patients |
| 192 | 746 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
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|
747 'Resources' : [ brainixPatient, kneePatient ] |
| 192 | 748 }) |
| 749 self.assertEqual(3, len(z.namelist())) | |
|
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|
750 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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|
751 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
752 |
|
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changeset
|
753 z = PostArchive(_REMOTE, '/patients/%s/archive' % kneePatient, { |
|
403
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|
754 'Synchronous' : True |
|
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|
755 }) |
|
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changeset
|
756 self.assertEqual(2, len(z.namelist())) |
|
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changeset
|
757 |
|
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changeset
|
758 # archive with 2 studies |
|
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|
759 z = PostArchive(_REMOTE, '/tools/create-archive', { |
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|
760 'Resources' : [ brainixStudy, kneeStudy ] |
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|
761 }) |
|
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changeset
|
762 self.assertEqual(3, len(z.namelist())) |
|
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|
763 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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changeset
|
764 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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changeset
|
765 |
|
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|
766 # archive with 1 patient & 1 study |
|
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|
767 z = PostArchive(_REMOTE, '/tools/create-archive', { |
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changeset
|
768 'Resources' : [ brainixPatient, kneeStudy ] |
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|
769 }) |
|
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|
770 self.assertEqual(3, len(z.namelist())) |
|
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|
771 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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changeset
|
772 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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diff
changeset
|
773 |
|
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parents:
573
diff
changeset
|
774 |
|
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changeset
|
775 def test_archive_with_patient_ids_collision(self): |
|
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|
776 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
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|
777 # one PatientID: COMMON |
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|
778 # 2 PatientName: HELLO & WORLD |
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changeset
|
779 |
|
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|
780 hello = UploadInstance(_REMOTE, 'PatientIdsCollision/Image1.dcm') |
|
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|
781 world = UploadInstance(_REMOTE, 'PatientIdsCollision/Image2.dcm') |
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|
782 helloStudy = hello['ParentStudy'] |
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|
783 worldStudy = world['ParentStudy'] |
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|
784 helloPatient = hello['ParentPatient'] |
|
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|
785 worldPatient = world['ParentPatient'] |
|
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changeset
|
786 |
|
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changeset
|
787 self.assertEqual(helloPatient, worldPatient) |
|
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diff
changeset
|
788 |
|
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changeset
|
789 # when downloading the Patient, we do not really know what PatientName we will get in the zip |
|
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|
790 z = GetArchive(_REMOTE, '/patients/%s/archive' % helloPatient) |
|
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changeset
|
791 self.assertEqual(2, len(z.namelist())) |
|
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diff
changeset
|
792 |
|
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diff
changeset
|
793 # when downloading studies individually, we want to have the PatientName that appears in the study |
|
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changeset
|
794 z = GetArchive(_REMOTE, '/studies/%s/archive' % helloStudy) |
|
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changeset
|
795 self.assertEqual(1, len(z.namelist())) |
|
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|
796 self.assertIn('COMMON HELLO/HELLO SERIES/Unknown Series/00000000.dcm', z.namelist()) |
|
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changeset
|
797 |
|
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diff
changeset
|
798 z = GetArchive(_REMOTE, '/studies/%s/archive' % worldStudy) |
|
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changeset
|
799 self.assertEqual(1, len(z.namelist())) |
|
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|
800 self.assertIn('COMMON WORLD/WORLD SERIES/Unknown Series/00000000.dcm', z.namelist()) |
|
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diff
changeset
|
801 |
|
615201c822d8
new test for PatientName used when exporting an archive
Alain Mazy <am@osimis.io>
parents:
573
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changeset
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802 |
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8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
803 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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804 def test_media_archive(self): |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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805 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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806 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
807 |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
808 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
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809 self.assertEqual(3, len(z.namelist())) |
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parents:
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diff
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810 self.assertTrue('IMAGES/IM0' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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811 self.assertTrue('IMAGES/IM1' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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812 self.assertTrue('DICOMDIR' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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813 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
814 try: |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
815 os.remove('/tmp/DICOMDIR') |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
816 except: |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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changeset
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817 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
818 pass |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
819 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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820 z.extract('DICOMDIR', '/tmp') |
| 45 | 821 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
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8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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822 stderr = subprocess.STDOUT).split('\n') |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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823 self.assertEqual(3, len(a)) |
|
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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824 self.assertTrue(a[0].startswith('Warning')) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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825 self.assertEqual('BasicDirectory', a[1]) |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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|
826 self.assertEqual('', a[2]) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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827 |
| 45 | 828 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
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8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
829 stderr = subprocess.STDOUT).split('\n') |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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830 self.assertEqual(1, len(a)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
831 self.assertEqual('', a[0]) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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832 |
| 45 | 833 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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834 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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835 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
836 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
837 os.remove('/tmp/DICOMDIR') |
| 10 | 838 |
| 839 | |
| 840 def test_protection(self): | |
| 841 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 842 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 843 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 844 a = DoGet(_REMOTE, '/patients')[0] | |
| 845 b = DoGet(_REMOTE, '/patients')[1] | |
| 846 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 847 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 848 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 849 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 850 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 851 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 852 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 853 | |
| 854 | |
| 12 | 855 def test_raw_tags(self): |
| 10 | 856 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 857 | |
| 858 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 859 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 860 | |
| 861 s = '/instances/%s/content/' % i | |
| 862 | |
| 863 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 864 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 865 | |
| 866 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 867 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 868 | |
| 869 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 870 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 871 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 872 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 873 | |
| 874 for i in DoGet(_REMOTE, '/instances'): | |
| 875 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 876 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 877 | |
| 878 | |
| 879 def test_raw_tags_mdn(self): | |
| 880 # Bug reported by Cyril Paulus | |
| 881 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 882 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 883 | |
| 884 | |
| 885 def test_modify_instance(self): | |
| 886 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 887 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 888 json.dumps({ | |
| 889 "Replace" : { | |
| 890 "PatientName" : "hello", | |
| 891 #"PatientID" : "world" | |
| 892 }, | |
| 893 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
894 "RemovePrivateTags" : True |
| 10 | 895 }), |
| 896 'application/json') | |
| 897 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 898 | |
| 899 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 900 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 901 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 902 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 903 | |
| 904 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 905 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 906 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 907 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 908 | |
| 909 | |
| 910 def test_modify_series(self): | |
| 911 # Upload 4 images from the same series | |
| 912 for i in range(4): | |
| 913 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 914 | |
| 915 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 916 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 917 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 918 'application/json')['ID'] | |
| 919 | |
| 920 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 921 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 922 self.assertEqual(4, len(instances)) | |
| 923 for i in instances: | |
| 924 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 925 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 926 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 927 | |
| 928 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 929 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 930 | |
| 931 | |
| 932 def test_modify_study(self): | |
| 933 # Upload 4 images from the 2 series of the same study | |
| 934 for i in range(4): | |
| 935 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 936 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 937 | |
| 938 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 939 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 940 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 941 'application/json')['ID'] | |
| 942 | |
| 943 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 944 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 945 self.assertEqual(2, len(series)) | |
| 946 for s in series: | |
| 947 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 948 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 949 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 950 | |
| 951 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 952 for i in instances: | |
| 953 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 954 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 955 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 956 | |
| 957 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 958 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 959 | |
| 960 | |
| 961 def test_anonymize_series(self): | |
| 962 # Upload 4 images from the same series | |
| 963 for i in range(4): | |
| 964 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 965 | |
| 966 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 967 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 968 '{}', | |
| 969 'application/json')['ID'] | |
| 970 | |
| 971 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 972 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 973 self.assertEqual(4, len(instances)) | |
| 974 for i in instances: | |
| 975 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 976 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 977 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 978 | |
| 979 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 980 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 981 | |
| 982 | |
| 983 def test_anonymize_study(self): | |
| 984 # Upload 4 images from the 2 series of the same study | |
| 985 for i in range(4): | |
| 986 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 987 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 988 | |
| 989 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 990 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 991 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 992 'application/json')['ID'] | |
| 993 | |
| 994 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 995 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 996 self.assertEqual(2, len(series)) | |
| 997 for s in series: | |
| 998 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 999 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 1000 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 1001 | |
| 1002 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 1003 for i in instances: | |
| 1004 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 1005 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 1006 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 1007 | |
| 1008 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 1009 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 1010 |
| 1011 | |
| 1012 | |
| 1013 def test_storescu(self): | |
| 1014 # Check emptiness | |
| 1015 e = DoGet(_REMOTE, '/exports') | |
| 1016 self.assertEqual(0, len(e['Exports'])) | |
| 1017 self.assertEqual(0, e['Last']) | |
| 1018 self.assertTrue(e['Done']) | |
| 1019 e = DoGet(_REMOTE, '/exports?last') | |
| 1020 self.assertEqual(0, len(e['Exports'])) | |
| 1021 self.assertEqual(0, e['Last']) | |
| 1022 self.assertTrue(e['Done']) | |
| 1023 | |
| 1024 # Add 1 instance | |
| 1025 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1026 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1027 | |
| 1028 # Export the instance | |
| 1029 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 1030 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1031 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 1032 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 1033 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 1034 | |
| 1035 e = DoGet(_REMOTE, '/exports') | |
| 1036 self.assertEqual(1, len(e['Exports'])) | |
| 1037 self.assertTrue(e['Done']) | |
| 1038 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1039 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 1040 self.assertEqual(1, len(e['Exports'])) | |
| 1041 self.assertTrue(e['Done']) | |
| 1042 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1043 e = DoGet(_REMOTE, '/exports?last') | |
| 1044 self.assertEqual(1, len(e['Exports'])) | |
| 1045 self.assertTrue(e['Done']) | |
| 1046 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1047 seqInstance = e['Last'] | |
| 1048 | |
| 1049 # Export the series | |
| 1050 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 1051 | |
| 1052 e = DoGet(_REMOTE, '/exports') | |
| 1053 self.assertEqual(2, len(e['Exports'])) | |
| 1054 self.assertTrue(e['Done']) | |
| 1055 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1056 seqSeries = e['Last'] | |
| 1057 self.assertNotEqual(seqInstance, seqSeries) | |
| 1058 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 1059 self.assertEqual(1, len(e['Exports'])) | |
| 1060 self.assertFalse(e['Done']) | |
| 1061 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 1062 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 1063 self.assertEqual(1, len(e['Exports'])) | |
| 1064 self.assertTrue(e['Done']) | |
| 1065 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1066 e = DoGet(_REMOTE, '/exports?last') | |
| 1067 self.assertEqual(1, len(e['Exports'])) | |
| 1068 self.assertTrue(e['Done']) | |
| 1069 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1070 | |
| 1071 # Export the study | |
| 1072 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 1073 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 1074 | |
| 1075 # Export the patient | |
| 1076 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 1077 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1078 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 1079 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 1080 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 1081 | |
| 1082 e = DoGet(_REMOTE, '/exports') | |
| 1083 self.assertEqual(4, len(e['Exports'])) | |
| 1084 self.assertTrue(e['Done']) | |
| 1085 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1086 seqPatient = e['Last'] | |
| 1087 self.assertNotEqual(seqInstance, seqSeries) | |
| 1088 self.assertNotEqual(seqSeries, seqStudy) | |
| 1089 self.assertNotEqual(seqStudy, seqPatient) | |
| 1090 self.assertTrue(seqInstance < seqSeries) | |
| 1091 self.assertTrue(seqSeries < seqStudy) | |
| 1092 self.assertTrue(seqStudy < seqPatient) | |
| 1093 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 1094 self.assertEqual(1, len(e['Exports'])) | |
| 1095 self.assertFalse(e['Done']) | |
| 1096 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 1097 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 1098 self.assertEqual(1, len(e['Exports'])) | |
| 1099 self.assertFalse(e['Done']) | |
| 1100 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1101 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 1102 self.assertEqual(1, len(e['Exports'])) | |
| 1103 self.assertFalse(e['Done']) | |
| 1104 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 1105 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 1106 self.assertEqual(1, len(e['Exports'])) | |
| 1107 self.assertTrue(e['Done']) | |
| 1108 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 1109 e = DoGet(_REMOTE, '/exports?last') | |
| 1110 self.assertEqual(1, len(e['Exports'])) | |
| 1111 self.assertTrue(e['Done']) | |
| 1112 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 1113 | |
| 1114 | |
| 1115 # Check the content of the logged information | |
| 1116 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 1117 | |
| 1118 if 'PatientID' in e[0]: | |
| 1119 # Since Orthanc 0.8.6 | |
| 1120 patient = 'PatientID' | |
| 1121 study = 'StudyInstanceUID' | |
| 1122 series = 'SeriesInstanceUID' | |
| 1123 instance = 'SOPInstanceUID' | |
| 1124 else: | |
| 1125 # Up to Orthanc 0.8.5 | |
| 1126 patient = 'PatientId' | |
| 1127 study = 'StudyInstanceUid' | |
| 1128 series = 'SeriesInstanceUid' | |
| 1129 instance = 'SopInstanceUid' | |
| 1130 | |
| 1131 for k in range(4): | |
| 1132 self.assertTrue('Date' in e[k]) | |
| 1133 self.assertTrue('Seq' in e[k]) | |
| 1134 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 1135 | |
| 1136 self.assertEqual(10, len(e[0])) | |
| 1137 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 1138 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 1139 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 1140 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 1141 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 1142 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 1143 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 1144 | |
| 1145 self.assertEqual(9, len(e[1])) | |
| 1146 self.assertEqual('Series', e[1]['ResourceType']) | |
| 1147 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 1148 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 1149 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 1150 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 1151 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 1152 | |
| 1153 self.assertEqual(8, len(e[2])) | |
| 1154 self.assertEqual('Study', e[2]['ResourceType']) | |
| 1155 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 1156 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 1157 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1158 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1159 | |
| 1160 self.assertEqual(7, len(e[3])) | |
| 1161 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1162 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1163 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1164 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1165 | |
| 1166 DropOrthanc(_REMOTE) | |
| 1167 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1168 | |
| 1169 | |
| 1170 def test_store_peer(self): | |
| 1171 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1172 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1173 | |
| 1174 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1175 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1176 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1177 | |
| 1178 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1179 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1180 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1181 | |
| 1182 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1183 | |
| 1184 DropOrthanc(_REMOTE) | |
| 1185 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1186 | |
| 1187 | |
| 1188 def test_bulk_storescu(self): | |
| 1189 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1190 | |
| 1191 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1192 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1193 | |
| 1194 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1195 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1196 | |
| 1197 DropOrthanc(_LOCAL) | |
| 1198 | |
| 1199 # Send using patient's UUID | |
| 1200 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1201 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1202 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1203 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1204 | |
| 1205 | |
| 1206 def test_color(self): | |
| 1207 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1208 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1209 self.assertEqual("RGB", im.mode) | |
| 1210 self.assertEqual(41, im.size[0]) | |
| 1211 self.assertEqual(41, im.size[1]) | |
| 1212 | |
| 1213 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1214 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1215 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1216 | |
| 1217 | |
| 12 | 1218 def test_faking_ruby_put(self): |
| 1219 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1220 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1221 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1222 a = DoGet(_REMOTE, '/patients')[0] | |
| 1223 b = DoGet(_REMOTE, '/patients')[1] | |
| 1224 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1225 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1226 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1227 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1228 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1229 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1230 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1231 | |
| 1232 | |
| 1233 def test_faking_ruby_delete(self): | |
| 1234 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1235 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1236 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1237 a = DoGet(_REMOTE, '/patients')[0] | |
| 1238 b = DoGet(_REMOTE, '/patients')[1] | |
| 1239 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1240 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1241 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1242 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1243 | |
| 1244 | |
| 1245 def test_faking_google_put(self): | |
| 1246 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1247 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1248 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1249 a = DoGet(_REMOTE, '/patients')[0] | |
| 1250 b = DoGet(_REMOTE, '/patients')[1] | |
| 1251 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1252 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1253 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1254 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1255 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1256 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1257 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1258 | |
| 1259 | |
| 1260 def test_faking_google_delete(self): | |
| 1261 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1262 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1263 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1264 a = DoGet(_REMOTE, '/patients')[0] | |
| 1265 b = DoGet(_REMOTE, '/patients')[1] | |
| 1266 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1267 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1268 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1269 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1270 | |
| 1271 | |
| 1272 def test_lua(self): | |
| 1273 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1274 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1275 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1276 | |
| 1277 | |
| 1278 def test_metadata(self): | |
| 1279 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1280 p = DoGet(_REMOTE, '/patients')[0] | |
| 1281 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1282 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1283 |
| 1284 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
|
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1285 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1286 self.assertEqual(2, len(m)) |
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1287 self.assertTrue('MainDicomTagsSignature' in m) |
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1288 else: |
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1289 self.assertEqual(1, len(m)) |
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1290 self.assertTrue('LastUpdate' in m) |
| 12 | 1291 |
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1292 # The lines below failed on Orthanc <= 1.8.2 |
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1293 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1294 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1295 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1296 |
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1297 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1298 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1299 self.assertEqual(2, len(m)) |
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1300 self.assertTrue('MainDicomTagsSignature' in m) |
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1301 else: |
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1302 self.assertEqual(1, len(m)) |
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1303 self.assertTrue('LastUpdate' in m) |
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1304 |
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1305 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1306 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1307 self.assertEqual(3, len(m)) |
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1308 self.assertTrue('MainDicomTagsSignature' in m) |
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1309 else: |
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1310 self.assertEqual(2, len(m)) |
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1311 self.assertTrue('LastUpdate' in m) |
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1312 |
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1313 # New in Orthanc 1.9.0 |
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1314 self.assertTrue('RemoteAET' in m) |
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1315 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1316 |
| 12 | 1317 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
|
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1318 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1319 self.assertEqual(10, len(m)) |
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1320 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1321 self.assertEqual(9, len(m)) |
|
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1322 else: |
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1323 self.assertEqual(8, len(m)) |
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1324 |
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1325 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1326 self.assertTrue('MainDicomTagsSignature' in m) |
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1327 |
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1328 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1329 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1330 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1331 |
| 12 | 1332 self.assertTrue('IndexInSeries' in m) |
| 1333 self.assertTrue('ReceptionDate' in m) | |
| 1334 self.assertTrue('RemoteAET' in m) | |
|
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|
1335 self.assertTrue('Origin' in m) |
|
89
74b7b9aed5f8
test TransferSyntax metadata
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diff
changeset
|
1336 self.assertTrue('TransferSyntax' in m) |
|
95
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parents:
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diff
changeset
|
1337 self.assertTrue('SopClassUid' in m) |
| 145 | 1338 self.assertTrue('RemoteIP' in m) |
| 1339 self.assertTrue('HttpUsername' in m) | |
|
63
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diff
changeset
|
1340 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
|
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diff
changeset
|
1341 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
|
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diff
changeset
|
1342 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
89
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diff
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|
1343 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
95
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diff
changeset
|
1344 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1345 |
| 1346 # Play with custom metadata | |
|
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diff
changeset
|
1347 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
|
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|
1348 self.assertEqual('200', headers['status']) |
|
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diff
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|
1349 self.assertEqual('', body) |
|
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|
1350 |
|
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diff
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|
1351 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
eb87ec525b53
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diff
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|
1352 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
394
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|
1353 else: |
|
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|
1354 self.assertFalse('ETag' in headers) |
|
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|
1355 self.assertFalse('etag' in headers) |
|
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|
1356 |
| 12 | 1357 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
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diff
changeset
|
1358 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
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Alain Mazy <am@osimis.io>
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diff
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|
1359 self.assertEqual(3, len(m)) |
|
33051f9ac850
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diff
changeset
|
1360 self.assertTrue('MainDicomTagsSignature' in m) |
|
33051f9ac850
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diff
changeset
|
1361 else: |
|
33051f9ac850
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diff
changeset
|
1362 self.assertEqual(2, len(m)) |
| 12 | 1363 self.assertTrue('LastUpdate' in m) |
| 1364 self.assertTrue('5555' in m) | |
| 1365 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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|
1366 |
|
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diff
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|
1367 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1368 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
|
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|
1369 'If-Match' : headers['etag'] |
|
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|
1370 }) |
|
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diff
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|
1371 else: |
|
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diff
changeset
|
1372 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
391
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diff
changeset
|
1373 |
|
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diff
changeset
|
1374 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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|
1375 self.assertEqual('200', headers['status']) |
|
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diff
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|
1376 self.assertEqual('hello', body) |
|
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|
1377 |
|
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diff
changeset
|
1378 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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diff
changeset
|
1379 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
|
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diff
changeset
|
1380 'If-Match' : headers['etag'] |
|
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|
1381 }) |
|
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diff
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|
1382 else: |
|
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diff
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|
1383 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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|
1384 |
| 12 | 1385 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
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diff
changeset
|
1386 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1387 self.assertEqual(2, len(m)) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
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diff
changeset
|
1388 self.assertTrue('MainDicomTagsSignature' in m) |
|
33051f9ac850
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diff
changeset
|
1389 else: |
|
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diff
changeset
|
1390 self.assertEqual(1, len(m)) |
| 12 | 1391 self.assertTrue('LastUpdate' in m) |
| 13 | 1392 |
| 1393 | |
| 1394 def test_statistics(self): | |
| 1395 # Upload 16 instances | |
| 1396 for i in range(4): | |
| 1397 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1398 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1399 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1400 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1401 | |
| 1402 s = DoGet(_REMOTE, '/statistics') | |
| 1403 self.assertEqual(16, s['CountInstances']) | |
| 1404 self.assertEqual(2, s['CountPatients']) | |
| 1405 self.assertEqual(2, s['CountStudies']) | |
| 1406 self.assertEqual(4, s['CountSeries']) | |
| 1407 d = int(s['TotalUncompressedSize']) | |
| 1408 | |
| 1409 e = 0 | |
| 1410 for patient in DoGet(_REMOTE, '/patients'): | |
| 1411 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1412 self.assertEqual(8, s['CountInstances']) | |
| 1413 self.assertEqual(1, s['CountStudies']) | |
| 1414 self.assertEqual(2, s['CountSeries']) | |
| 1415 e += int(s['UncompressedSize']) | |
| 1416 | |
| 1417 for study in DoGet(_REMOTE, '/studies'): | |
| 1418 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1419 self.assertEqual(8, s['CountInstances']) | |
| 1420 self.assertEqual(2, s['CountSeries']) | |
| 1421 e += int(s['UncompressedSize']) | |
| 1422 | |
| 1423 for series in DoGet(_REMOTE, '/series'): | |
| 1424 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1425 self.assertEqual(4, s['CountInstances']) | |
| 1426 e += int(s['UncompressedSize']) | |
| 1427 | |
| 1428 self.assertEqual(3 * d, e) | |
| 1429 | |
| 1430 | |
| 1431 def test_custom_attachment(self): | |
|
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|
1432 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
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|
1433 |
| 13 | 1434 patient = DoGet(_REMOTE, '/patients')[0] |
| 1435 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1436 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1437 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1438 | |
| 1439 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1440 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
380
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diff
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|
1441 |
|
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diff
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|
1442 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
1443 if IsDicomUntilPixelDataStored(_REMOTE): |
|
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|
1444 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1445 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
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diff
changeset
|
1446 |
|
448
63f475995400
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diff
changeset
|
1447 # New in Orthanc 1.10.0 |
|
443
97fca09bf849
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diff
changeset
|
1448 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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diff
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|
1449 self.assertEqual(2, len(a)) |
|
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diff
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|
1450 self.assertEqual(1, a['dicom']) |
|
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diff
changeset
|
1451 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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|
1452 |
|
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|
1453 else: |
|
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changeset
|
1454 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
443
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diff
changeset
|
1455 |
|
448
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Orthanc 1.9.8 is now known as Orthanc 1.10.0
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diff
changeset
|
1456 # New in Orthanc 1.10.0 |
|
443
97fca09bf849
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diff
changeset
|
1457 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1458 self.assertEqual(1, len(a)) |
|
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diff
changeset
|
1459 self.assertEqual(1, a['dicom']) |
|
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|
1460 else: |
|
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changeset
|
1461 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1462 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1463 |
|
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diff
changeset
|
1464 # New in Orthanc 1.10.0 |
|
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diff
changeset
|
1465 self.assertRaises(Exception, lambda: DoGet( |
|
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changeset
|
1466 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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|
1467 |
| 13 | 1468 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1469 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1470 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1471 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1472 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1473 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1474 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1475 | |
| 1476 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1477 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1478 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1479 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1480 size + | |
| 1481 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1482 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1483 | |
| 1484 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1485 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1486 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1487 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1488 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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changeset
|
1489 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
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changeset
|
1490 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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changeset
|
1491 }) |
|
393
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changeset
|
1492 |
|
394
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changeset
|
1493 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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changeset
|
1494 self.assertEqual('200', headers['status']) |
|
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diff
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|
1495 self.assertEqual('world2', body) |
| 13 | 1496 |
| 1497 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
392
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|
1498 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
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|
1499 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
392
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|
1500 }) |
| 13 | 1501 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1502 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1503 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1504 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1505 | |
| 1506 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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|
1507 |
|
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|
1508 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1509 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
|
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|
1510 'If-Match' : headers['etag'] |
|
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|
1511 }) |
|
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1512 else: |
|
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diff
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|
1513 self.assertFalse('etag' in headers) |
|
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diff
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|
1514 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
|
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|
1515 |
| 13 | 1516 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1517 | |
| 1518 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1519 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1520 | |
| 1521 | |
| 1522 def test_incoming_storescu(self): | |
| 1523 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1524 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
Toolbox.FindExecutable()
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diff
changeset
|
1525 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1526 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1527 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1528 | |
|
63
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test Origin metadata of instances
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diff
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|
1529 i = DoGet(_REMOTE, '/instances') |
|
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diff
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|
1530 self.assertEqual(1, len(i)) |
|
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diff
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|
1531 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
379
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|
1532 |
|
554
ede184638961
added test_pixel_data_vr
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diff
changeset
|
1533 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
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diff
changeset
|
1534 self.assertEqual(10, len(m)) |
|
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diff
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|
1535 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
379
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|
1536 self.assertEqual(9, len(m)) |
|
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|
1537 else: |
|
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diff
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|
1538 self.assertEqual(8, len(m)) |
|
547
7de5fd295025
testing instance metadata "PixelDataVR"
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543
diff
changeset
|
1539 |
|
7de5fd295025
testing instance metadata "PixelDataVR"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1540 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
7de5fd295025
testing instance metadata "PixelDataVR"
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diff
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|
1541 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
|
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diff
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|
1542 |
|
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diff
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|
1543 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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diff
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|
1544 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
|
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diff
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|
1545 self.assertEqual(2242, DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i[0])) |
|
7de5fd295025
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diff
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|
1546 |
|
63
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diff
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|
1547 self.assertTrue('IndexInSeries' in m) |
|
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diff
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|
1548 self.assertTrue('ReceptionDate' in m) |
|
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diff
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|
1549 self.assertTrue('RemoteAET' in m) |
|
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diff
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|
1550 self.assertTrue('Origin' in m) |
|
89
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diff
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|
1551 self.assertTrue('TransferSyntax' in m) |
|
95
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diff
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|
1552 self.assertTrue('SopClassUid' in m) |
| 145 | 1553 self.assertTrue('RemoteIP' in m) |
| 1554 self.assertTrue('CalledAET' in m) | |
|
63
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diff
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|
1555 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
|
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diff
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|
1556 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
|
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diff
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|
1557 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
89
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|
1558 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
95
a807a4699eb4
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diff
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|
1559 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
63
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diff
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|
1560 |
|
369
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test "RemoteAET" metadata at series level
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diff
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|
1561 series = DoGet(_REMOTE, '/series')[0] |
|
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diff
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|
1562 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
451
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diff
changeset
|
1563 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
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diff
changeset
|
1564 self.assertEqual(3, len(m)) |
|
33051f9ac850
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diff
changeset
|
1565 self.assertTrue('MainDicomTagsSignature' in m) |
|
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diff
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|
1566 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
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diff
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|
1567 self.assertEqual(2, len(m)) |
|
369
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|
1568 self.assertTrue('LastUpdate' in m) |
|
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diff
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|
1569 self.assertTrue('RemoteAET' in m) |
|
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diff
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|
1570 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
|
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diff
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|
1571 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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|
1572 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
|
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|
1573 |
| 13 | 1574 |
| 1575 def test_incoming_findscu(self): | |
| 1576 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1577 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1578 | |
| 1579 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1580 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1581 self.assertEqual(2, len(patientNames)) | |
| 1582 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1583 self.assertTrue('Anonymized' in patientNames) | |
| 1584 | |
| 668 | 1585 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010=*' ]) |
| 1586 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1587 self.assertEqual(2, len(patientNames)) | |
| 1588 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1589 self.assertTrue('Anonymized' in patientNames) | |
| 1590 | |
| 13 | 1591 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) |
| 1592 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1593 self.assertEqual(2, len(series)) | |
| 1594 self.assertTrue('20070208' in series) | |
| 1595 self.assertTrue('19980312' in series) | |
| 1596 | |
|
335
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diff
changeset
|
1597 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
1059b8de42de
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diff
changeset
|
1598 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
1059b8de42de
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diff
changeset
|
1599 self.assertEqual(1, len(series)) |
|
1059b8de42de
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diff
changeset
|
1600 self.assertTrue('19980312' in series) |
|
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diff
changeset
|
1601 |
| 13 | 1602 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1603 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1604 self.assertEqual(1, len(series)) | |
| 1605 | |
| 1606 # Test the "CaseSentitivePN" flag (false by default) | |
| 1607 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1608 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1609 self.assertEqual(1, len(series)) | |
|
66
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diff
changeset
|
1610 |
| 70 | 1611 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1612 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1613 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1614 self.assertEqual(2, len(studies)) | |
| 1615 self.assertTrue('20070208' in studies) | |
| 1616 self.assertTrue('19980312' in studies) | |
| 1617 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1618 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1619 self.assertEqual(1, len(studies)) | |
| 1620 self.assertTrue('19980312' in studies) | |
| 1621 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1622 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1623 self.assertEqual(1, len(studies)) | |
| 1624 self.assertTrue('19980312' in studies) | |
|
326
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|
1625 |
|
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Test "Retrieve AE Title" is returned by C-FIND SCP
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|
1626 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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|
1627 # was *not* the case in Orthanc <= 1.7.2 |
|
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changeset
|
1628 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
|
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changeset
|
1629 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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|
1630 self.assertEqual(2, len(instances)) |
|
05f48c19c60d
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changeset
|
1631 self.assertEqual('ORTHANC', instances[0].strip()) |
|
05f48c19c60d
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changeset
|
1632 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1633 |
| 1634 | |
|
191
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diff
changeset
|
1635 def test_incoming_findscu_2(self): |
|
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|
1636 # This test fails if "LookupMode_DatabaseOnly" is used |
|
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|
1637 # (sequences are not available in this mode, and only main |
|
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|
1638 # DICOM tags are returned) |
|
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|
1639 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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changeset
|
1640 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
1641 |
|
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|
1642 # Test returning sequence values (only since Orthanc 0.9.5) |
|
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|
1643 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
|
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changeset
|
1644 sequences = re.findall('\(0008,2112\)', i) |
|
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1645 self.assertEqual(1, len(sequences)) |
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1646 |
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1647 # Test returning a non-main DICOM tag, |
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1648 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1649 # "MEDPC" in "ColorTestImageJ.dcm" |
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1650 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1651 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1652 self.assertEqual(1, len(tags)) |
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1653 |
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1654 |
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1655 def test_incoming_findscu_3(self): |
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1656 # This test fails if "LookupMode_DatabaseOnly" or |
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1657 # "LookupMode_DiskOnAnswer" is used, as |
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1658 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1659 # tag, as thus a constraint cannot be applied to it |
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1660 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1661 |
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1662 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1663 sequences = re.findall('\(0018,1010\)', i) |
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1664 self.assertEqual(1, len(sequences)) |
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1665 |
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1666 |
| 13 | 1667 def test_incoming_movescu(self): |
| 1668 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1669 |
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1670 # No matching patient, so no job is created |
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1671 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1672 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1673 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1674 |
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1675 # 1 Matching patient, track the job |
| 138 | 1676 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1677 '--patient', | |
| 1678 '-k', '0008,0052=PATIENT', | |
| 1679 '-k', 'PatientID=12345678' | |
| 1680 ]))) | |
| 13 | 1681 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1682 | |
| 1683 | |
| 1684 def test_findscu(self): | |
| 1685 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1686 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1687 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1688 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1689 | |
| 1690 # Test the "find-patient" level | |
| 1691 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1692 self.assertEqual(1, len(p)) | |
| 1693 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1694 | |
| 1695 # Test wildcards constraints. The "LO" value representation | |
| 1696 # for PatientID is always case-sensitive, but the "PN" for | |
| 1697 # PatientName might depend on the implementation: | |
| 1698 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1699 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1700 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1701 self.assertEqual(1, len(p)) | |
| 1702 | |
| 1703 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1704 self.assertEqual(1, len(p)) | |
| 1705 | |
| 1706 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1707 self.assertEqual(1, len(p)) | |
| 1708 | |
| 1709 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1710 self.assertEqual(1, len(p)) | |
| 1711 | |
| 1712 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1713 self.assertEqual(0, len(p)) | |
| 1714 | |
| 1715 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1716 self.assertEqual(0, len(p)) | |
| 1717 | |
| 1718 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1719 self.assertEqual(0, len(p)) | |
| 1720 | |
| 1721 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1722 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1723 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1724 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1725 | |
| 1726 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1727 self.assertEqual(2, len(p)) | |
| 1728 | |
| 1729 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1730 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1731 self.assertEqual(1, len(s)) | |
| 1732 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1733 | |
| 1734 # Test range searches | |
| 1735 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1736 'StudyDate' : '-20070101' }) | |
| 1737 self.assertEqual(0, len(t)) | |
| 1738 | |
| 1739 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1740 'StudyDate' : '20090101-' }) | |
| 1741 self.assertEqual(0, len(t)) | |
| 1742 | |
| 1743 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1744 'StudyDate' : '20070101-' }) | |
| 1745 self.assertEqual(1, len(t)) | |
| 1746 | |
| 1747 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1748 'StudyDate' : '-20090101' }) | |
| 1749 self.assertEqual(1, len(t)) | |
| 1750 | |
| 1751 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1752 'StudyDate' : '20070207-20070207' }) | |
| 1753 self.assertEqual(0, len(t)) | |
| 1754 | |
| 1755 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1756 'StudyDate' : '20070208-20070208' }) | |
| 1757 self.assertEqual(1, len(t)) | |
| 1758 | |
| 1759 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1760 'StudyDate' : '20070209-20070209' }) | |
| 1761 self.assertEqual(0, len(t)) | |
| 1762 | |
| 1763 # Test the ModalitiesInStudy tag | |
| 1764 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1765 'PatientID' : 'B9uTHKOZ', | |
| 1766 'ModalitiesInStudy' : 'US' }) | |
| 1767 self.assertEqual(0, len(t)) | |
| 1768 | |
| 1769 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1770 'PatientID' : 'B9uTHKOZ', | |
| 1771 'ModalitiesInStudy' : 'CT' }) | |
| 1772 self.assertEqual(1, len(t)) | |
| 1773 | |
| 1774 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1775 'PatientID' : 'B9uTHKOZ', | |
| 1776 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1777 self.assertEqual(1, len(t)) | |
| 1778 | |
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1779 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1780 'PatientID' : 'B9uTHKOZ', |
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1781 'ModalitiesInStudy' : '' }) |
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1782 self.assertEqual(1, len(t)) |
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1783 |
| 13 | 1784 # Test the "find-series" level |
| 1785 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1786 'PatientID' : 'B9uTHKOZ', | |
| 1787 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1788 self.assertEqual(1, len(t)) | |
| 1789 | |
| 1790 # Test "\" separator | |
| 1791 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1792 'PatientID' : 'B9uTHKOZ', | |
| 1793 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1794 'Modality' : 'MR\\CT\\US' }) | |
| 1795 self.assertEqual(1, len(t)) | |
| 1796 | |
| 1797 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1798 'PatientID' : 'B9uTHKOZ', | |
| 1799 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1800 'Modality' : 'MR\\US' }) | |
| 1801 self.assertEqual(0, len(t)) | |
| 1802 | |
| 1803 | |
| 1804 def test_update_modalities(self): | |
| 1805 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1806 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1807 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1808 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1809 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1810 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1811 DoDelete(_REMOTE, '/modalities/tata') |
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1812 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1813 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
|
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1814 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1815 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1816 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1817 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1818 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1819 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1820 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1821 |
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1822 # New in Orthanc 1.8.1 |
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1823 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1824 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1825 |
| 13 | 1826 DoDelete(_REMOTE, '/modalities/toto') |
| 1827 DoDelete(_REMOTE, '/modalities/tata') | |
| 1828 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1829 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1830 | |
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1831 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
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1832 self.assertEqual(DoGet(_REMOTE, '/modalities?expand'), DoGet(_REMOTE, '/modalities?expand=true')) |
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1833 self.assertEqual(DoGet(_REMOTE, '/modalities'), DoGet(_REMOTE, '/modalities?expand=false')) |
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1834 |
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1835 |
| 13 | 1836 |
| 1837 def test_update_peers(self): | |
| 1838 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1839 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1840 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1841 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1842 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1843 'Username': 'user', | |
| 1844 'Password' : 'pass', | |
| 1845 'RemoteSelf' : 'self' }) | |
| 128 | 1846 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1847 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1848 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1849 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1850 |
| 1851 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1852 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1853 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1854 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1855 else: | |
| 1856 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1857 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1858 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1859 | |
| 128 | 1860 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1861 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1862 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1863 |
| 13 | 1864 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1865 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1866 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1867 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1868 |
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1869 # New in Orthanc 1.8.1 |
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1870 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1871 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1872 |
| 13 | 1873 DoDelete(_REMOTE, '/peers/toto') |
| 1874 DoDelete(_REMOTE, '/peers/tata') | |
| 1875 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1876 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1877 | |
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1878 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
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1879 self.assertEqual(DoGet(_REMOTE, '/peers?expand'), DoGet(_REMOTE, '/peers?expand=true')) |
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1880 self.assertEqual(DoGet(_REMOTE, '/peers'), DoGet(_REMOTE, '/peers?expand=false')) |
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1881 |
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1882 |
| 13 | 1883 |
| 1884 def test_mesterhazy_modification(self): | |
| 1885 # When I modify a series ( eg. curl | |
| 1886 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1887 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1888 # series is added to a new Study, instead of the existing | |
| 1889 # Study. Fixed in Orthanc 0.7.5 | |
| 1890 | |
| 1891 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1892 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1893 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1894 | |
| 1895 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1896 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1897 | |
| 1898 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1899 | |
| 1900 | |
| 1901 def test_create(self): | |
| 685 | 1902 payload = { |
| 1903 'PatientName' : 'Jodogne', | |
| 1904 'Modality' : 'CT', | |
| 1905 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', | |
| 1906 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA | |
| 1907 } | |
| 1908 | |
| 1909 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): | |
| 687 | 1910 payload['TimeRange'] = '3.12\\4.12' # https://discourse.orthanc-server.org/t/multiplicity-on-dicom-tags/5144 |
| 685 | 1911 |
| 13 | 1912 i = DoPost(_REMOTE, '/tools/create-dicom', |
| 685 | 1913 json.dumps(payload)) |
| 13 | 1914 |
| 1915 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1916 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 682 | 1917 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i['ID']) |
| 686 | 1918 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): |
| 1919 self.assertIn("3.12", tags["TimeRange"]) | |
| 1920 self.assertIn("4.12", tags["TimeRange"]) | |
| 1921 self.assertIn("\\", tags["TimeRange"]) | |
| 681 | 1922 |
| 1923 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1924 self.assertEqual((5, 5), png.size) | |
| 1925 | |
| 1926 j = DoGet(_REMOTE, i['Path']) | |
| 1927 self.assertEqual('Instance', j['Type']) | |
| 1928 self.assertEqual(j['ID'], i['ID']) | |
| 1929 | |
| 13 | 1930 |
| 1931 def test_pilates(self): | |
| 1932 # "SCU failed error when accessing orthanc with osirix" by | |
| 1933 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1934 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1935 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1936 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1937 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1938 | |
| 1939 | |
| 1940 def test_shared_tags(self): | |
| 1941 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1942 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1943 p = DoGet(_REMOTE, '/patients')[0] | |
| 1944 | |
| 1945 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1946 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1947 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1948 |
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1949 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1950 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1951 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1952 |
| 13 | 1953 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1954 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1955 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1956 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1957 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1958 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1959 | |
| 1960 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1961 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1962 | |
| 1963 | |
| 1964 def test_modules(self): | |
| 1965 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1966 p = DoGet(_REMOTE, '/patients')[0] | |
| 1967 s = DoGet(_REMOTE, '/studies')[0] | |
| 1968 t = DoGet(_REMOTE, '/series')[0] | |
| 1969 | |
| 1970 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1971 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1972 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1973 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1974 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1975 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1976 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1977 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1978 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1979 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1980 | |
| 1981 | |
| 1982 def test_auto_directory(self): | |
| 1983 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1984 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1985 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1986 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1987 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1988 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1989 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1990 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1991 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1992 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1993 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1994 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1995 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1996 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1997 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1998 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1999 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 2000 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 2001 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 2002 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 2003 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 2004 |
| 2005 | |
| 2006 def test_echo(self): | |
| 2007 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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2008 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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2009 |
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2010 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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2011 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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2012 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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2013 |
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2014 # New in Orthanc 1.8.1 |
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2015 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 2016 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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2017 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 2018 |
| 353 | 2019 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 2020 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 2021 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 2022 'AET' : _REMOTE['DicomAet'], | |
| 2023 'Host' : _REMOTE['Server'], | |
| 2024 'Port' : _REMOTE['DicomPort'], | |
| 2025 'CheckFind' : True | |
| 2026 }) | |
| 2027 | |
| 13 | 2028 |
| 2029 def test_xml(self): | |
| 2030 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 2031 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 2032 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 2033 self.assertEqual(len(items), len(json)) | |
| 2034 | |
| 2035 self.assertTrue('dicom-conformance' in json) | |
| 2036 | |
| 2037 ok = False | |
| 2038 for i in items: | |
| 2039 if i.childNodes[0].data == 'dicom-conformance': | |
| 2040 ok = True | |
| 2041 self.assertTrue(ok) | |
| 2042 | |
| 2043 | |
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2044 def test_googlecode_issue_16(self): |
| 13 | 2045 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 2046 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 2047 self.assertEqual('0018,1063', t) | |
| 2048 | |
| 2049 | |
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2050 def test_googlecode_issue_22(self): |
| 13 | 2051 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 2052 a = [ | |
| 2053 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 2054 "c69eee9a51eea3e8611e82e578897254", | |
| 2055 "315666be83e2d0111c77bc0996d84901", | |
| 2056 "3e27aa959d911172c48a1436443c72b1", | |
| 2057 "958642c9e7e9d232d3869faff546058c", | |
| 2058 "5e7ea8e3e4230cae707d143481355c59", | |
| 2059 "eda37f83558d858a596175aed8b2ad47", | |
| 2060 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 2061 "091ef729eb169e67da8a0faa9631f9a8", | |
| 2062 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 2063 "e2f39e85896fe58876654b94cd0b5013", | |
| 2064 "6fd2129e4950abbe1be053bc814d5da8", | |
| 2065 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 2066 "746f808582156734dd6b6fdfd3a0b72c", | |
| 2067 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 2068 "806b8b3e300c615099c11a5ec23465aa", | |
| 2069 "7c836aa298ba6eef96434579af631a11", | |
| 2070 "a0357dc9f4f72d73a885c33d7c287446", | |
| 2071 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 2072 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 2073 "44e6670f127e612a2b4aa60a0d207698", | |
| 2074 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 2075 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 2076 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 2077 ] | |
| 2078 | |
| 2079 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 2080 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 2081 | |
| 2082 for i in range(len(a)): | |
| 2083 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 2084 | |
| 2085 | |
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2086 def test_googlecode_issue_19(self): |
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2087 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 2088 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 2089 | |
| 2090 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 2091 if not HasGdcmPlugin(_REMOTE): |
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2092 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 2093 |
| 2094 | |
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2095 def test_googlecode_issue_37(self): |
| 13 | 2096 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 2097 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 2098 | |
| 2099 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2100 'CaseSensitive' : True, | |
| 2101 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 2102 self.assertEqual(1, len(a)) | |
| 14 | 2103 |
| 2104 | |
| 2105 def test_rest_find(self): | |
| 548 | 2106 # Upload 12 instances |
| 2107 for i in range(3): | |
| 14 | 2108 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
| 2109 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2110 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2111 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2112 | |
| 548 | 2113 |
| 2114 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2115 'CaseSensitive' : True, | |
| 2116 'Query' : { | |
| 2117 'PatientName' : '*NE*', | |
| 2118 'StudyDate': '20080819' | |
| 2119 }}) | |
| 2120 self.assertEqual(1, len(a)) | |
| 2121 | |
| 2122 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2123 'CaseSensitive' : True, | |
| 2124 'Query' : { | |
| 2125 'PatientName' : '*NE*', | |
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2126 'PatientBirthDate': '20080101-20081231', |
| 548 | 2127 'PatientSex': '0000' |
| 2128 }}) | |
| 2129 self.assertEqual(1, len(a)) | |
| 2130 | |
| 2131 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2132 'CaseSensitive' : True, | |
| 2133 'Query' : { | |
| 2134 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' | |
| 2135 }}) | |
| 2136 self.assertEqual(2, len(a)) | |
| 2137 | |
| 2138 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 2139 'CaseSensitive' : True, | |
| 2140 'Query' : { | |
| 2141 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 2142 'SeriesInstanceUID': '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' | |
| 2143 }}) | |
| 2144 self.assertEqual(3, len(a)) | |
| 2145 | |
| 2146 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2147 'CaseSensitive' : True, | |
| 2148 'Query' : { | |
| 2149 'StudyDate' : '20080818-20080820', | |
| 2150 'Modality': 'MR' | |
| 2151 }}) | |
| 2152 self.assertEqual(2, len(a)) | |
| 2153 | |
| 2154 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2155 'CaseSensitive' : True, | |
| 2156 'Query' : { | |
| 2157 'StudyDate' : '20080818-', | |
| 2158 'ModalitiesInStudy': 'MR' | |
| 2159 }}) | |
| 2160 self.assertEqual(1, len(a)) | |
| 2161 | |
| 2162 | |
| 14 | 2163 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
| 2164 'CaseSensitive' : False, | |
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2165 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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2166 self.assertEqual(1, len(a)) |
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2168 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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2169 'CaseSensitive' : False, |
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2170 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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2171 self.assertEqual(2, len(a)) |
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2172 |
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2173 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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2174 'CaseSensitive' : False, |
| 14 | 2175 'Query' : { 'PatientName' : '*n*' }}) |
| 2176 self.assertEqual(2, len(a)) | |
| 2177 | |
| 2178 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 2179 'CaseSensitive' : True, | |
| 2180 'Query' : { 'PatientName' : '*n*' }}) | |
| 2181 self.assertEqual(0, len(a)) | |
| 2182 | |
| 2183 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 2184 'Level' : 'Patient', | |
| 2185 'CaseSensitive' : False, | |
| 2186 'Query' : { 'PatientName' : '*ne*' }}) | |
| 2187 self.assertEqual(1, len(a)) | |
| 2188 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 2189 | |
| 2190 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 2191 'CaseSensitive' : True, | |
| 2192 'Query' : { 'PatientName' : '*ne*' }}) | |
| 2193 self.assertEqual(0, len(a)) | |
| 2194 | |
| 2195 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2196 'CaseSensitive' : True, | |
| 2197 'Query' : { 'PatientName' : '*NE*' }}) | |
| 2198 self.assertEqual(1, len(a)) | |
| 2199 | |
| 2200 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2201 'CaseSensitive' : True, | |
| 2202 'Query' : { 'PatientName' : '*NE*' }}) | |
| 2203 self.assertEqual(2, len(a)) | |
| 2204 | |
| 2205 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 2206 'CaseSensitive' : True, | |
| 2207 'Query' : { 'PatientName' : '*NE*' }}) | |
| 548 | 2208 self.assertEqual(6, len(a)) |
| 14 | 2209 |
| 2210 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 2211 self.assertEqual(2, len(a)) | |
| 2212 | |
| 2213 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 2214 self.assertEqual(2, len(a)) | |
| 2215 | |
| 2216 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 2217 self.assertEqual(4, len(a)) | |
| 2218 | |
| 2219 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 548 | 2220 self.assertEqual(12, len(a)) |
| 14 | 2221 |
|
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2222 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2223 'Expand' : True, |
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2224 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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2225 self.assertEqual(1, len(a)) |
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2226 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2227 |
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2228 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2229 'Expand' : True, |
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2230 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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2231 self.assertEqual(2, len(a)) |
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2232 for i in range(2): |
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2233 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2234 |
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2235 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2236 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2237 self.assertEqual(0, len(a)) |
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2238 |
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2239 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2240 'Expand' : True, |
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2241 'Query' : { 'StudyDate' : '-20061201' }}) |
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2242 self.assertEqual(1, len(a)) |
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2243 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2244 |
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2245 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2246 'Expand' : True, |
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2247 'Query' : { 'StudyDate' : '-20051201' }}) |
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2248 self.assertEqual(0, len(a)) |
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2249 |
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2250 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2251 'Expand' : True, |
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2252 'Query' : { 'StudyDate' : '20061201-' }}) |
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2253 self.assertEqual(2, len(a)) |
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2254 for i in range(2): |
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2255 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2256 |
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2257 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2258 'Expand' : True, |
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2259 'Query' : { 'StudyDate' : '20061202-' }}) |
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2260 self.assertEqual(1, len(a)) |
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2261 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2262 |
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2263 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2264 'Expand' : True, |
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2265 'Query' : { 'StudyDate' : '20080819-' }}) |
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2266 self.assertEqual(1, len(a)) |
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2267 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2268 |
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2269 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2270 'Expand' : True, |
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2271 'Query' : { 'StudyDate' : '20080820-' }}) |
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2272 self.assertEqual(0, len(a)) |
|
666
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2273 |
|
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2274 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
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2275 'Expand' : True, |
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2276 'Query' : { 'PatientPosition' : 'HFS' }}) |
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2277 self.assertEqual(2, len(a)) |
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2278 |
|
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2279 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
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2280 'Expand' : False, |
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2281 'Query' : { 'PatientPosition' : 'HFS' }}) |
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2282 self.assertEqual(2, len(a)) |
|
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2283 |
| 14 | 2284 |
| 2285 def test_rest_query_retrieve(self): | |
| 2286 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2287 | |
| 2288 # Upload 8 instances | |
| 2289 for i in range(2): | |
| 2290 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2291 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2292 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2293 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2294 | |
| 2295 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2296 for p in DoGet(_REMOTE, '/patients'): | |
| 2297 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2298 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2299 | |
| 2300 for q in DoGet(_REMOTE, '/queries'): | |
| 2301 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2302 | |
| 2303 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2304 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
|
509
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2305 |
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2306 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # TODO: check why this works with 0.8.6 and not with more recent versions |
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2307 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', |
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2308 'Query' : { |
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2309 'PatientName' : '*NE*', |
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|
2310 'StudyDate' : '*', |
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|
2311 }})['ID'] |
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2312 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
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2313 |
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|
2314 b = DoGet(_REMOTE, '/queries/%s' % a) |
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2315 self.assertTrue('answers' in b) |
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2316 self.assertTrue('level' in b) |
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2317 self.assertTrue('modality' in b) |
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2318 self.assertTrue('query' in b) |
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2319 self.assertTrue('retrieve' in b) |
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2320 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) |
|
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|
2321 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) |
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|
2322 |
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2323 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) |
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2324 self.assertEqual(2, len(q)) |
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2325 self.assertTrue('PatientName' in q) |
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2326 self.assertTrue('StudyDate' in q) |
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2327 self.assertEqual('*NE*', q['PatientName']) |
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2328 self.assertEqual('*', q['StudyDate']) |
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2329 |
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2330 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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2331 |
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2332 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) |
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2333 self.assertTrue('content' in s) |
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2334 self.assertTrue('retrieve' in s) |
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2335 |
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2336 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) |
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2337 self.assertEqual('887', s['PatientID']) |
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2338 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) |
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2339 |
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2340 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2341 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') |
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2342 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2343 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2344 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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2345 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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2346 |
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2347 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
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2348 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2349 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2350 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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2351 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
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2352 |
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2353 # New in Orthanc 1.4.3 |
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2354 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2355 self.assertEqual(2, len(s)) |
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2356 for i in range(2): |
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2357 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2358 self.assertEqual('887', s[i]['PatientID']) |
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2359 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2360 |
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2361 DoDelete(_REMOTE, '/queries/%s' % a) |
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2362 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) |
| 14 | 2363 |
| 2364 | |
| 2365 def test_parent(self): | |
| 2366 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2367 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2368 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2369 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2370 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2371 self.assertEqual(instance, u) |
| 14 | 2372 |
| 2373 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2374 self.assertEqual('Patient', a['Type']) | |
| 2375 self.assertEqual(patient, a['ID']) | |
| 2376 | |
| 2377 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2378 self.assertEqual('Patient', a['Type']) | |
| 2379 self.assertEqual(patient, a['ID']) | |
| 2380 | |
| 2381 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2382 self.assertEqual('Study', a['Type']) | |
| 2383 self.assertEqual(study, a['ID']) | |
| 2384 | |
| 2385 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2386 self.assertEqual('Patient', a['Type']) | |
| 2387 self.assertEqual(patient, a['ID']) | |
| 2388 | |
| 2389 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2390 self.assertEqual('Study', a['Type']) | |
| 2391 self.assertEqual(study, a['ID']) | |
| 2392 | |
| 2393 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2394 self.assertEqual('Series', a['Type']) | |
| 2395 self.assertEqual(series, a['ID']) | |
| 2396 | |
| 2397 | |
| 2398 def test_shanon(self): | |
| 2399 def Anonymize(instance, replacements = {}): | |
| 119 | 2400 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2401 'Replace' : replacements, | |
| 2402 'Force' : True, | |
| 2403 }, 'application/json') | |
| 14 | 2404 |
| 2405 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2406 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2407 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2408 | |
| 2409 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2410 ids = [ 'ozp00SjY2xG', | |
| 2411 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2412 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2413 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2414 | |
| 2415 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2416 for i in range(4): | |
| 2417 self.assertNotEqual(ids[i], a[i]) | |
| 2418 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2419 | |
| 2420 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2421 for i in range(4): | |
| 2422 self.assertNotEqual(ids[i], a[i]) | |
| 2423 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2424 | |
| 2425 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2426 self.assertEqual('instance', a[3]) | |
| 2427 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2428 | |
| 2429 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2430 self.assertEqual('series', a[2]) | |
| 2431 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2432 | |
| 2433 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2434 self.assertEqual('study', a[1]) | |
| 2435 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2436 | |
| 2437 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2438 self.assertEqual('patient', a[0]) | |
| 2439 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2440 | |
| 2441 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2442 'StudyInstanceUID' : 'study', | |
| 2443 'SeriesInstanceUID' : 'series', | |
| 2444 'SOPInstanceUID' : 'instance' }), tags) | |
| 2445 self.assertEqual('patient', a[0]) | |
| 2446 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2447 | |
| 2448 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2449 | |
| 2450 | |
| 2451 def test_shanon_2(self): | |
| 2452 def Modify(instance, replacements = {}): | |
| 119 | 2453 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2454 'Replace' : replacements, | |
| 2455 'Force': True, | |
| 2456 }, 'application/json') | |
| 14 | 2457 |
| 2458 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2459 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2460 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2461 | |
| 2462 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2463 ids = [ 'ozp00SjY2xG', | |
| 2464 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2465 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2466 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2467 | |
| 2468 a = ExtractDicomTags(Modify(u), tags) | |
| 2469 self.assertEqual(ids[0], a[0]) | |
| 2470 self.assertEqual(ids[1], a[1]) | |
| 2471 self.assertEqual(ids[2], a[2]) | |
| 2472 self.assertNotEqual(ids[3], a[3]) | |
| 2473 self.assertEqual(0, len(a[4])) | |
| 2474 | |
| 2475 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2476 self.assertEqual(ids[0], a[0]) | |
| 2477 self.assertEqual(ids[1], a[1]) | |
| 2478 self.assertEqual(ids[2], a[2]) | |
| 2479 self.assertEqual('instance', a[3]) | |
| 2480 | |
| 2481 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2482 self.assertEqual(ids[0], a[0]) | |
| 2483 self.assertEqual(ids[1], a[1]) | |
| 2484 self.assertEqual('series', a[2]) | |
| 2485 self.assertNotEqual(ids[3], a[3]) | |
| 2486 | |
| 2487 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2488 self.assertEqual(ids[0], a[0]) | |
| 2489 self.assertEqual('study', a[1]) | |
| 2490 self.assertNotEqual(ids[2], a[2]) | |
| 2491 self.assertNotEqual(ids[3], a[3]) | |
| 2492 | |
| 2493 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2494 self.assertEqual('patient', a[0]) | |
| 2495 self.assertNotEqual(ids[1], a[1]) | |
| 2496 self.assertNotEqual(ids[2], a[2]) | |
| 2497 self.assertNotEqual(ids[3], a[3]) | |
| 2498 | |
| 2499 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2500 'StudyInstanceUID' : 'study', | |
| 2501 'SeriesInstanceUID' : 'series', | |
| 2502 'SOPInstanceUID' : 'instance' }), tags) | |
| 2503 self.assertEqual('patient', a[0]) | |
| 2504 self.assertEqual('study', a[1]) | |
| 2505 self.assertEqual('series', a[2]) | |
| 2506 self.assertEqual('instance', a[3]) | |
| 2507 | |
| 2508 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2509 | |
| 2510 | |
| 2511 def test_instances_tags(self): | |
| 2512 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2513 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2514 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2515 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2516 | |
| 2517 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2518 self.assertEqual(2, len(i)) | |
| 2519 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2520 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2521 | |
| 2522 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2523 self.assertEqual(2, len(i)) | |
| 2524 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2525 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2526 | |
| 2527 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2528 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2529 self.assertEqual(1, len(i)) | |
| 2530 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2531 | |
| 2532 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2533 self.assertEqual(1, len(i)) | |
| 2534 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2535 | |
|
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2536 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2537 self.assertEqual(1, len(i)) |
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2538 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2539 |
| 14 | 2540 |
| 2541 def test_lookup(self): | |
| 2542 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2543 self.assertEqual(0, len(a)) | |
| 2544 | |
| 2545 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2546 | |
| 2547 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2548 self.assertEqual(1, len(a)) | |
| 2549 self.assertEqual('Patient', a[0]['Type']) | |
| 2550 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2551 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2552 | |
| 2553 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2554 self.assertEqual(1, len(a)) | |
| 2555 self.assertEqual('Study', a[0]['Type']) | |
| 2556 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2557 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2558 | |
| 2559 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2560 self.assertEqual(1, len(a)) | |
| 2561 self.assertEqual('Series', a[0]['Type']) | |
| 2562 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2563 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2564 | |
| 2565 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2566 self.assertEqual(1, len(a)) | |
| 2567 self.assertEqual('Instance', a[0]['Type']) | |
| 2568 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2569 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2570 | |
| 2571 DropOrthanc(_REMOTE) | |
| 2572 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2573 self.assertEqual(0, len(a)) | |
| 2574 | |
| 15 | 2575 |
| 2576 def test_autorouting(self): | |
| 2577 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2578 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2579 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2580 | |
| 2581 # Check that this version is >= 0.8.0 | |
| 2582 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2583 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2584 | |
| 2585 UploadInstance(_REMOTE, knee1) | |
| 2586 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2587 | |
| 2588 DropOrthanc(_REMOTE) | |
| 2589 DropOrthanc(_LOCAL) | |
| 174 | 2590 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2591 UploadInstance(_REMOTE, knee1) |
| 2592 UploadInstance(_REMOTE, knee2) | |
| 2593 UploadInstance(_REMOTE, other) | |
| 2594 WaitEmpty(_REMOTE) | |
| 174 | 2595 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2596 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2597 | |
| 2598 DropOrthanc(_REMOTE) | |
| 2599 DropOrthanc(_LOCAL) | |
| 174 | 2600 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2601 UploadInstance(_REMOTE, knee1) |
| 2602 UploadInstance(_REMOTE, knee2) | |
| 2603 UploadInstance(_REMOTE, other) | |
| 2604 WaitEmpty(_REMOTE) | |
| 174 | 2605 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2606 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2607 | |
| 2608 DropOrthanc(_REMOTE) | |
| 2609 DropOrthanc(_LOCAL) | |
| 174 | 2610 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2611 UploadInstance(_REMOTE, knee1) |
| 2612 WaitEmpty(_REMOTE) | |
| 174 | 2613 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2614 i = DoGet(_LOCAL, '/instances') |
| 2615 self.assertEqual(1, len(i)) | |
| 2616 | |
| 2617 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2618 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2619 f.flush() | |
| 45 | 2620 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2621 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2622 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2623 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2624 |
| 2625 | |
| 2626 def test_storescu_rf(self): | |
| 2627 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2628 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2629 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2630 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2631 |
| 2632 | |
| 2633 def test_anonymize_instance(self): | |
| 2634 def AnonymizeAndUpload(instanceId, parameters): | |
| 2635 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2636 'application/json'), 'application/dicom')['ID'] | |
| 2637 | |
| 2638 def ModifyAndUpload(instanceId, parameters): | |
| 2639 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2640 'application/json'), 'application/dicom')['ID'] | |
| 2641 | |
| 2642 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2643 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2644 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2645 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2646 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2647 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2648 | |
| 2649 b = AnonymizeAndUpload(a, '{}') | |
| 2650 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2651 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2652 | |
| 2653 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2654 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2655 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2656 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2657 | |
| 2658 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2659 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2660 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2661 | |
| 2662 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2663 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2664 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2665 | |
| 2666 # Examples from the Wiki | |
|
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2667 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2668 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2669 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2670 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2671 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2672 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2673 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2674 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2675 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2676 | |
|
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2677 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2678 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2679 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2680 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2681 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2682 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2683 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2684 | |
|
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|
2685 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2686 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2687 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2688 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2689 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2690 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2691 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2692 | |
| 2693 | |
| 2694 # Test modify non-existing | |
| 2695 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2696 json.dumps({ | |
| 2697 'PatientName' : 'Jodogne', | |
| 2698 'Modality' : 'CT', | |
| 2699 }))['ID'] | |
| 2700 | |
| 2701 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2702 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2703 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2704 | |
| 2705 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2706 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2707 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2708 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2709 | |
|
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2710 |
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2711 def test_incoming_jpeg(self): |
|
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2712 # since this test fails regularly on CI, enable verbosity |
|
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2713 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
|
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2714 |
|
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2715 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
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2716 if acceptUnknownSopClassUid: |
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2717 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2718 else: |
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2719 tmp = [ '-xs' ] |
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2720 |
|
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2721 while retries > 0: |
|
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2722 retries -= 1 |
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2723 with open(os.devnull, 'w') as FNULL: |
|
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2724 try: |
|
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2725 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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2726 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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2727 GetDatabasePath(image) ], |
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2728 stderr = FNULL) |
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2729 |
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2730 if expectSuccess: |
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2731 return |
|
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2732 except subprocess.CalledProcessError as e: |
|
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2733 print('storescu failed with error code: %s' % str(e.returncode)) |
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2734 if not expectSuccess: |
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2735 raise e |
|
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2736 |
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2737 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2738 |
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2739 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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2740 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
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2741 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
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2742 ]) |
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2743 self.assertTrue('1.2.840.10008.1.2' in a) |
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2744 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2745 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2746 self.assertEqual(3, len(a)) |
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2747 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2748 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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2749 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2750 else: |
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2751 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
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2752 |
| 490 | 2753 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
|
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2754 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
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2755 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
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2756 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2757 |
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|
2758 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2759 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
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2760 self.assertGreaterEqual(42, len(a)) |
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2761 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
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diff
changeset
|
2762 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2763 else: |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2764 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2765 |
|
62
f9c4ce95756f
removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
61
diff
changeset
|
2766 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2767 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2768 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2769 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2770 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2771 # set back normal verbosity |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2772 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2773 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2774 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2775 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2776 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2777 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2778 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2779 | |
| 2780 # This is JPEG lossless | |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2781 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2782 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2783 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2784 |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2785 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2786 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2787 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2788 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2789 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2790 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2791 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2792 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2793 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2794 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2795 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2796 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2797 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2798 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2799 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2800 def test_pixel_data(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2801 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2802 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2803 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2804 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2805 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2806 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2807 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2808 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2809 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2810 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2811 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2812 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2813 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2814 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2815 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2816 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2817 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2818 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2819 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2820 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2821 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2822 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2823 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2824 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2825 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2826 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2827 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2828 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2829 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2830 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2831 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2832 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2833 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2834 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2835 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2836 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2837 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2838 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2839 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2840 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2841 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2842 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2843 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2844 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2845 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2846 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2847 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2848 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2849 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2850 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2851 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2852 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2853 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2854 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2855 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2856 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2857 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2858 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2859 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2860 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2861 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2862 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2863 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2864 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2865 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2866 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2867 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2868 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2869 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2870 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2871 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2872 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2873 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2874 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2875 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2876 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2877 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2878 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2879 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2880 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2881 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2882 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2883 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2884 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2885 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2886 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2887 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2888 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2889 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2890 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2891 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2892 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2893 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2894 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2895 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2896 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2897 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2898 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2899 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2900 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2901 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2902 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2903 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2904 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2905 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2906 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2907 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2908 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2909 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2910 |
| 2911 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2912 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2913 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2914 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2915 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2916 |
| 22 | 2917 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2918 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2919 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2920 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2921 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2922 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2923 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2924 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2925 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2926 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2927 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2928 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2929 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2930 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2931 |
| 22 | 2932 def test_encodings(self): |
| 23 | 2933 # Latin-1 (ISO_IR 100) |
| 22 | 2934 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2935 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2936 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2937 |
| 2938 # Latin-2 (ISO_IR 101) | |
| 2939 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2940 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2941 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2942 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2943 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2944 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2945 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2946 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2947 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2948 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2949 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2950 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2951 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2952 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2953 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2954 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2955 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2956 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2957 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2958 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2959 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2960 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2961 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2962 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2963 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2964 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2965 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2966 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2967 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2968 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2969 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2970 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2971 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2972 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2973 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2974 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2975 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2976 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2977 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2978 |
| 174 | 2979 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2980 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2981 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2982 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2983 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2984 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2985 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2986 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2987 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2988 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2989 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2990 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2991 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2992 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
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parents:
28
diff
changeset
|
2993 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2994 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2995 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2996 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2997 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2998 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2999 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3000 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3001 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3002 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3003 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3004 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3005 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3006 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3007 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3008 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3009 |
|
688
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3010 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): # with ExtendedFind, the limit=0 means no-limit like in /tools/find |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3011 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3012 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3013 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3014 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3015 else: |
| 675 | 3016 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
688
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3017 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=1&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3018 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=0'))) |
|
b58f639aee60
added tests for limit=0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
687
diff
changeset
|
3019 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=0'))) |
|
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
3020 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3021 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3022 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3023 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3024 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3025 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3026 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3027 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3028 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3029 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3030 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3031 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3032 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3033 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3034 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3035 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3036 s = {} |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3037 since = 0 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3038 while True: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3039 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3040 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3041 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3042 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3043 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3044 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3045 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3046 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3047 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3048 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3049 self.assertTrue(instance in s) |
| 36 | 3050 |
| 3051 | |
| 3052 def test_create_pdf(self): | |
| 3053 # Upload 4 instances | |
| 3054 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 3055 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3056 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3057 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3058 | |
| 3059 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 3060 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 3061 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 3062 | |
| 3063 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 3064 pdf = f.read() | |
| 3065 | |
| 3066 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3067 json.dumps({ | |
| 3068 'Tags' : { | |
| 3069 'PatientName' : 'Jodogne', | |
| 3070 'Modality' : 'CT', | |
| 3071 }, | |
| 3072 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3073 })) | |
| 3074 | |
| 3075 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
565
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3076 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.1', DoGet(_REMOTE, '/instances/%s/content/SOPClassUID' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3077 self.assertEqual('WSD', DoGet(_REMOTE, '/instances/%s/content/ConversionType' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3078 self.assertEqual('application/pdf', DoGet(_REMOTE, '/instances/%s/content/MIMETypeOfEncapsulatedDocument' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
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557
diff
changeset
|
3079 |
|
446
9184e6cb215a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3080 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3081 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3082 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 3083 |
| 3084 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 3085 self.assertEqual(len(b), len(pdf) + 1) | |
| 3086 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 3087 | |
| 3088 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 3089 json.dumps({ | |
| 3090 'Parent' : brainixPatient, | |
| 3091 'Tags' : { | |
| 3092 'PatientName' : 'Jodogne', | |
| 3093 } | |
| 3094 }))) | |
| 3095 | |
| 3096 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3097 json.dumps({ | |
| 3098 'Parent' : brainixPatient, | |
| 3099 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 3100 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3101 })) | |
| 3102 | |
| 3103 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
|
565
855c3720902a
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diff
changeset
|
3104 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.1', DoGet(_REMOTE, '/instances/%s/content/SOPClassUID' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3105 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3106 self.assertEqual('WSD', DoGet(_REMOTE, '/instances/%s/content/ConversionType' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3107 self.assertEqual('application/pdf', DoGet(_REMOTE, '/instances/%s/content/MIMETypeOfEncapsulatedDocument' % i['ID']).strip()) |
| 36 | 3108 |
| 3109 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3110 json.dumps({ | |
| 3111 'Parent' : brainixStudy, | |
| 3112 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 3113 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3114 })) | |
| 3115 | |
| 3116 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 3117 | |
| 3118 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3119 json.dumps({ | |
| 3120 'Parent' : brainixEpi, | |
| 37 | 3121 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 3122 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 3123 })) | |
| 3124 | |
| 3125 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 3126 | |
| 3127 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 3128 self.assertEqual(len(b), len(pdf)) | |
| 3129 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 3130 | |
| 3131 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 3132 |
| 3133 | |
| 3134 def test_create_series(self): | |
| 3135 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3136 json.dumps({ | |
| 3137 'Tags' : { | |
| 40 | 3138 'SpecificCharacterSet' : 'ISO_IR 100', |
| 3139 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 3140 'Modality' : 'CT', |
| 3141 }, | |
| 3142 'Content' : [ | |
| 40 | 3143 { |
| 3144 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 3145 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 3146 }, | |
| 38 | 3147 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 3148 ] | |
| 3149 })) | |
| 3150 | |
| 3151 s = DoGet(_REMOTE, i['Path']) | |
| 3152 self.assertEqual('Series', s['Type']) | |
| 3153 self.assertEqual(s['ID'], i['ID']) | |
| 3154 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 3155 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 3156 self.assertEqual('Complete', s['Status']) | |
| 40 | 3157 |
| 3158 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 3159 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 3160 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 3161 if 'ImageComments' in a: | |
| 3162 self.assertEqual('Tutu', a['ImageComments']) | |
| 3163 else: | |
| 3164 self.assertEqual('Tutu', b['ImageComments']) | |
| 3165 | |
| 3166 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 3167 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 3168 'Sébastien Jodogne') | |
| 47 | 3169 |
| 3170 | |
| 3171 def test_create_binary(self): | |
| 3172 binary = ''.join(map(chr, range(256))) | |
| 3173 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 3174 tags = { | |
| 3175 'PatientName' : 'Jodogne', | |
| 3176 '8899-8899' : encoded | |
| 3177 } | |
| 3178 | |
| 3179 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3180 json.dumps({ | |
| 266 | 3181 'Tags' : tags, |
| 3182 'PrivateCreator' : 'TestBinary', | |
| 47 | 3183 })) |
| 3184 | |
| 3185 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 3186 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 3187 | |
| 3188 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3189 json.dumps({ | |
| 3190 'InterpretBinaryTags' : False, | |
| 266 | 3191 'Tags' : tags, |
| 3192 'PrivateCreator' : 'TestBinary', | |
| 47 | 3193 })) |
| 3194 | |
| 3195 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 3196 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3197 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3198 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3199 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3200 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3201 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3202 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3203 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3204 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3205 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3206 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3207 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3208 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3209 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3210 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3211 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3212 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3213 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3214 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3215 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3216 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3217 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3218 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3219 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3220 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3221 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3222 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3223 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3224 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3225 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3226 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3227 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3228 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3229 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3230 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3231 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3232 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3233 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3234 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3235 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3236 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3237 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3238 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3239 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3240 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3241 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3242 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3243 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3244 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3245 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3246 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3247 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3248 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3249 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3250 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3251 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3252 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3253 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3254 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3255 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3256 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3257 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3258 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3259 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3260 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3261 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3262 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3263 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3264 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3265 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3266 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3267 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3268 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3269 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3270 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3271 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3272 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3273 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3274 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3275 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3276 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3277 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3278 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3279 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3280 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3281 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3282 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
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diff
changeset
|
3283 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
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diff
changeset
|
3284 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
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diff
changeset
|
3285 |
|
264a20a0276d
test_modify_sequence
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diff
changeset
|
3286 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
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parents:
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diff
changeset
|
3287 json.dumps({ |
|
264a20a0276d
test_modify_sequence
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diff
changeset
|
3288 "Replace" : { |
|
264a20a0276d
test_modify_sequence
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50
diff
changeset
|
3289 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
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parents:
50
diff
changeset
|
3290 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
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parents:
50
diff
changeset
|
3291 }, |
|
264a20a0276d
test_modify_sequence
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diff
changeset
|
3292 }), |
|
264a20a0276d
test_modify_sequence
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diff
changeset
|
3293 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3294 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3295 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3296 |
| 52 | 3297 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3298 | |
| 3299 | |
| 3300 def test_compression(self): | |
| 3301 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3302 | |
|
380
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diff
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|
3303 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
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|
3304 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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diff
changeset
|
3305 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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diff
changeset
|
3306 self.assertEqual(1, len(aa)) |
|
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diff
changeset
|
3307 self.assertTrue('dicom' in aa) |
|
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diff
changeset
|
3308 else: |
|
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379
diff
changeset
|
3309 self.assertEqual(2, len(aa)) |
|
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379
diff
changeset
|
3310 self.assertTrue('dicom' in aa) |
|
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diff
changeset
|
3311 self.assertTrue('dicom-as-json' in aa) |
|
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diff
changeset
|
3312 |
|
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diff
changeset
|
3313 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
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diff
changeset
|
3314 |
|
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diff
changeset
|
3315 # If "StorageCompression" is enabled in the Orthanc to be |
|
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diff
changeset
|
3316 # tested, uncompress the attachment before running the test |
|
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diff
changeset
|
3317 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
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379
diff
changeset
|
3318 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3319 |
|
380
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diff
changeset
|
3320 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
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diff
changeset
|
3321 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
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|
3322 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
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|
3323 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
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|
3324 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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changeset
|
3325 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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changeset
|
3326 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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diff
changeset
|
3327 |
|
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diff
changeset
|
3328 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3329 self.assertTrue('compress' in ops) |
| 3330 self.assertTrue('uncompress' in ops) | |
| 3331 self.assertTrue('is-compressed' in ops) | |
|
380
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diff
changeset
|
3332 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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diff
changeset
|
3333 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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|
3334 |
|
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changeset
|
3335 # Re-compress the attachment |
|
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diff
changeset
|
3336 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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diff
changeset
|
3337 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3338 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3339 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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|
3340 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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changeset
|
3341 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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changeset
|
3342 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3343 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3344 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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|
3345 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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diff
changeset
|
3346 |
|
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diff
changeset
|
3347 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
|
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diff
changeset
|
3348 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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diff
changeset
|
3349 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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changeset
|
3350 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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changeset
|
3351 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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diff
changeset
|
3352 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3353 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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changeset
|
3354 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3355 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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changeset
|
3356 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3357 |
| 3358 | |
| 3359 def test_ordered_slices(self): | |
| 3360 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3361 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3362 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3363 self.assertEqual('Sequence', o['Type']) | |
| 3364 self.assertEqual(1, len(o['Dicom'])) | |
| 3365 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3366 self.assertEqual(76, len(o['Slices'])) | |
| 3367 for j in range(76): | |
| 3368 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3369 | |
| 68 | 3370 self.assertEqual(1, len(o['SlicesShort'])) |
| 3371 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3372 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3373 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3374 | |
| 53 | 3375 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3376 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3377 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3378 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3379 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3380 | |
| 3381 self.assertEqual('Volume', o['Type']) | |
| 3382 self.assertEqual(3, len(o['Dicom'])) | |
| 3383 self.assertEqual(3, len(o['Slices'])) | |
| 3384 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3385 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3386 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3387 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3388 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3389 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3390 | |
| 68 | 3391 self.assertEqual(3, len(o['SlicesShort'])) |
| 3392 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3393 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3394 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3395 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3396 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3397 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3398 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3399 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3400 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3401 | |
| 53 | 3402 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3403 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3404 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3405 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3406 | |
| 3407 self.assertEqual('Sequence', o['Type']) | |
| 3408 self.assertEqual(2, len(o['Dicom'])) | |
| 3409 self.assertEqual(2, len(o['Slices'])) | |
| 3410 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3411 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3412 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3413 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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diff
changeset
|
3414 |
| 68 | 3415 self.assertEqual(2, len(o['SlicesShort'])) |
| 3416 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3417 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3418 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3419 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3420 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3421 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3422 | |
| 3423 | |
|
54
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diff
changeset
|
3424 |
|
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53
diff
changeset
|
3425 def test_incoming_movescu_accession(self): |
|
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diff
changeset
|
3426 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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changeset
|
3427 |
|
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diff
changeset
|
3428 # No matching patient, so no job is created |
|
54
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diff
changeset
|
3429 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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changeset
|
3430 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3431 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3432 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3433 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
3434 |
|
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
3435 # 1 Matching patient, track the job |
| 138 | 3436 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3437 '--study', | |
| 3438 '-k', '0008,0052=STUDY', | |
| 3439 '-k', 'AccessionNumber=A10003245599' | |
| 3440 ]))) | |
|
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
3441 |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3442 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3443 |
| 55 | 3444 |
| 3445 def test_dicom_to_json(self): | |
| 3446 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3447 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3448 |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3449 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3450 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3451 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3452 # Tags for compatibility with DCMTK 3.6.0 |
| 3453 'RETIRED_OtherPatientIDs', | |
| 3454 'OtherPatientIDs', | |
| 3455 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3456 ])) |
| 55 | 3457 |
| 3458 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3459 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3460 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3461 ])) |
| 55 | 3462 |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3463 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3464 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3465 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3466 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3467 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3468 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3469 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3470 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3471 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3472 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3473 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3474 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3475 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3476 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3477 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3478 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3479 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3480 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3481 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3482 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3483 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3484 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3485 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3486 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3487 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3488 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3489 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3490 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3491 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3492 self.assertEqual(aa, tt) |
| 57 | 3493 |
| 3494 | |
| 3495 def test_batch_archive(self): | |
| 3496 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3497 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3498 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3499 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3500 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3501 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3502 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3503 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3504 | |
| 3505 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3506 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3507 self.assertEqual(0, len(z.namelist())) | |
| 3508 | |
| 3509 # One patient | |
| 3510 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3511 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3512 self.assertEqual(4, len(z.namelist())) | |
| 3513 | |
| 3514 # One patient + twice its study + one series from other patient | |
| 3515 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3516 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3517 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3518 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3519 ]) | |
| 3520 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3521 self.assertEqual(6, len(z.namelist())) | |
| 3522 | |
| 3523 # One patient + one series + one instance | |
| 3524 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3525 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3526 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3527 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3528 ]) | |
| 3529 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3530 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3531 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3532 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3533 s = DoGet(_REMOTE, '/tools/create-archive?resources=ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17,1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0,1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87') |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3534 z = zipfile.ZipFile(StringIO(s), "r") |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3535 self.assertEqual(7, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3536 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3537 |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3538 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3539 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3540 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3541 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3542 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3543 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3544 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3545 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3546 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3547 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3548 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3549 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3550 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3551 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3552 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3553 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3554 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3555 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3556 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3557 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3558 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3559 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3560 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3561 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3562 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3563 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3564 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3565 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3566 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3567 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3568 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3569 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3570 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3571 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3572 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3573 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3574 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3575 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3576 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3577 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3578 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3579 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3580 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3581 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3582 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3583 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3584 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3585 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3586 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3587 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3588 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3589 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3590 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3591 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3592 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3593 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3594 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3595 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3596 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3597 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3598 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3599 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3600 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3601 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3602 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3603 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3604 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3605 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3606 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3607 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3608 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3609 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3610 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3611 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3612 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3613 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3614 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3615 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3616 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3617 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3618 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3619 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3620 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3621 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3622 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3623 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3624 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3625 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3626 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3627 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3628 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3629 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3630 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3631 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3632 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3633 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3634 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3635 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3636 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3637 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3638 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3639 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3640 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3641 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3642 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3643 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3644 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3645 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3646 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3647 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3648 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3649 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3650 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3651 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3652 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3653 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3654 self.assertTrue('PT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3655 self.assertTrue('CT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3656 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3657 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3658 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3659 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents:
175
diff
changeset
|
3660 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3661 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3662 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3663 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3664 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3665 def test_decode_transfer_syntax(self): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3666 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
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|
3667 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
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|
3668 |
|
89
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test TransferSyntax metadata
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87
diff
changeset
|
3669 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
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diff
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|
3670 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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diff
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|
3671 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
test TransferSyntax metadata
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|
3672 |
|
78
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diff
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|
3673 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
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74
diff
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|
3674 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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test_decode_transfer_syntax
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|
3675 else: |
|
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test_decode_transfer_syntax
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diff
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|
3676 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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test_decode_transfer_syntax
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diff
changeset
|
3677 self.assertEqual(m, md5) |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3678 |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3679 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3680 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3681 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3682 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
b89af51797ff
test_decode_transfer_syntax
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diff
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|
3683 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3684 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3685 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3686 | |
| 3687 # The 3 checks below don't work on big-endian | |
| 3688 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
b89af51797ff
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diff
changeset
|
3689 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3690 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
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diff
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|
3691 |
|
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diff
changeset
|
3692 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3693 if not HasGdcmPlugin(_REMOTE): |
|
299
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|
3694 Check('1.2.840.10008.1.2.4.90', None) |
|
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|
3695 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3696 |
| 3697 | |
| 3698 def test_raw_frame(self): | |
| 3699 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3700 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3701 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3702 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3703 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3704 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3705 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3706 | |
| 3707 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3708 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3709 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3710 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3711 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3712 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3713 self.assertEqual("L", im.mode) | |
| 3714 self.assertEqual(512, im.size[0]) | |
| 3715 self.assertEqual(512, im.size[1]) | |
| 3716 | |
| 3717 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3718 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3719 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3720 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3721 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3722 self.assertEqual(69214, len(a)) | |
| 3723 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3724 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3725 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3726 self.assertEqual("RGB", im.mode) | |
| 3727 self.assertEqual(512, im.size[0]) | |
| 3728 self.assertEqual(512, im.size[1]) | |
| 323 | 3729 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3730 self.assertEqual("RGB", im.mode) |
| 3731 self.assertEqual(512, im.size[0]) | |
| 3732 self.assertEqual(512, im.size[1]) | |
| 81 | 3733 |
| 3734 | |
| 3735 | |
| 3736 def test_rest_movescu(self): | |
| 3737 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3738 | |
| 3739 # Upload 4 instances | |
| 3740 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3741 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3742 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3743 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3744 | |
| 3745 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3746 for p in DoGet(_REMOTE, '/patients'): | |
| 3747 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3748 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3749 | |
| 3750 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3751 | |
|
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|
3752 # Move instance Brainix/Flair/IM-0001-0001.dcm |
|
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|
3753 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
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|
3754 'Level' : 'Instance', |
|
535e651e70a2
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diff
changeset
|
3755 'Resources' : [ |
|
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added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3756 { |
|
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diff
changeset
|
3757 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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diff
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|
3758 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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diff
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|
3759 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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diff
changeset
|
3760 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3761 ]}) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3762 |
|
535e651e70a2
added test for asynchronous cmove
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diff
changeset
|
3763 # Move series Brainix/Flair/* |
| 81 | 3764 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 3765 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3766 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3767 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3768 | |
|
482
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parents:
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diff
changeset
|
3769 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
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parents:
473
diff
changeset
|
3770 # Reset and test asynchronous C-Move at instance level |
|
535e651e70a2
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diff
changeset
|
3771 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3772 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
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473
diff
changeset
|
3773 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3774 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3775 'Level' : 'Instance', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3776 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3777 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3778 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
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diff
changeset
|
3779 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
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diff
changeset
|
3780 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3781 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3782 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3783 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3784 }) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3785 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3786 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3787 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
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473
diff
changeset
|
3788 'Level' : 'Instance', |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3789 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3790 { |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3791 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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Alain Mazy <am@osimis.io>
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diff
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|
3792 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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diff
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|
3793 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
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diff
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|
3794 } |
|
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473
diff
changeset
|
3795 ], |
|
535e651e70a2
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diff
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|
3796 'Asynchronous': True |
|
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diff
changeset
|
3797 })) |
|
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diff
changeset
|
3798 |
|
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diff
changeset
|
3799 self.assertNotEqual(None, job) |
|
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diff
changeset
|
3800 |
|
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diff
changeset
|
3801 # check the job was successfull |
|
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diff
changeset
|
3802 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
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|
3803 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
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|
3804 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
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diff
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|
3805 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
3806 |
|
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diff
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|
3807 # check the job content |
|
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diff
changeset
|
3808 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
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|
3809 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
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diff
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|
3810 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
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changeset
|
3811 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
|
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|
3812 |
|
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|
3813 # Reset and test synchronous C-Move at series level |
|
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|
3814 for p in DoGet(_REMOTE, '/patients'): |
|
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|
3815 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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|
3816 |
| 81 | 3817 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3818 'Resources' : [ | |
| 3819 { | |
| 3820 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3821 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3822 } | |
| 3823 ]}) | |
| 3824 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3825 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3826 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3827 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3828 | |
|
482
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3829 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3830 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3831 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3832 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3833 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3834 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3835 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3836 'Level' : 'Series', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3837 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3838 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3839 'PatientID' : '5Yp0E', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3840 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3841 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3842 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3843 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3844 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3845 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3846 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3847 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3848 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3849 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3850 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3851 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3852 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3853 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3854 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3855 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3856 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3857 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3858 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3859 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3860 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3861 # Move series Brainix/Epi/* |
| 81 | 3862 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3863 'Resources' : [ | |
| 3864 { | |
| 3865 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3866 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3867 } | |
| 3868 ]}) | |
| 3869 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3870 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3871 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3872 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3873 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3874 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3875 # Move study Knee asynchronously |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3876 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3877 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3878 'Level' : 'Study', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3879 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3880 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3881 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3882 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3883 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3884 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3885 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3886 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3887 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3888 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3889 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3890 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3891 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3892 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3893 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3894 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3895 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3896 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3897 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
| 81 | 3898 |
| 3899 # Reset | |
| 3900 for p in DoGet(_REMOTE, '/patients'): | |
| 3901 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3902 | |
| 3903 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3904 | |
| 3905 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3906 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3907 # Move all at once asynchronously at PatientLevel |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3908 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3909 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3910 'Level' : 'Patient', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3911 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3912 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3913 'PatientID' : '5Yp0E', |
| 81 | 3914 }, |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3915 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3916 'PatientID': '887', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3917 'PatientName' : 'KNEE', |
| 81 | 3918 } |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3919 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3920 'Synchronous': False |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3921 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3922 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3923 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3924 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3925 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3926 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
| 81 | 3927 |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3928 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3929 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3930 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3931 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3932 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3933 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3934 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3935 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3936 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3937 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3938 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3939 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3940 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3941 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3942 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3943 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3944 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3945 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3946 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3947 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3948 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3949 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3950 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3951 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3952 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3953 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3954 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3955 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3956 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3957 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3958 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3959 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3960 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3961 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3962 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3963 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3964 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3965 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3966 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3967 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3968 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3969 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3970 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3971 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3972 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3973 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3974 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3975 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3976 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3977 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3978 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3979 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3980 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3981 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3982 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3983 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3984 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3985 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3986 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3987 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3988 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3989 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3990 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3991 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3992 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3993 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3994 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3995 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3996 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3997 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3998 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3999 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4000 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4001 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4002 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4003 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4004 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4005 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4006 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4007 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4008 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4009 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4010 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4011 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4012 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4013 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4014 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4015 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4016 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4017 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4018 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4019 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4020 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4021 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4022 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4023 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4024 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4025 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4026 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4027 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4028 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4029 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4030 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4031 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4032 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4033 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4034 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4035 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4036 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4037 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4038 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4039 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4040 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4041 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4042 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4043 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4044 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4045 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4046 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4047 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4048 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4049 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4050 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4051 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4052 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4053 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4054 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4055 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4056 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4057 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4058 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4059 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4060 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4061 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4062 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4063 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4064 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4065 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4066 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4067 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4068 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4069 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4070 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4071 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4072 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4073 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4074 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4075 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4076 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4077 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4078 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4079 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4080 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4081 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4082 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4083 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4084 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4085 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4086 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4087 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4088 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4089 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4090 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4091 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4092 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4093 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4094 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4095 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4096 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4097 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4098 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4099 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4100 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4101 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4102 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4103 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4104 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4105 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4106 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4107 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4108 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4109 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4110 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4111 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4112 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4113 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4114 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4115 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4116 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4117 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4118 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4119 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4120 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4121 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4122 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4123 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4124 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4125 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4126 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4127 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4128 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4129 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4130 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4131 }, |
| 119 | 4132 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 4133 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4134 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4135 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4136 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4137 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4138 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4139 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4140 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4141 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4142 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4143 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4144 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4145 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4146 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4147 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4148 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4149 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4150 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4151 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4152 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4153 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4154 # metadata before reconstruct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4155 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4156 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4157 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4158 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4159 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4160 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4161 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4162 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4163 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4164 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4165 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4166 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4167 # metadata after reconstruct should have been preserved |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4168 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4169 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4170 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4171 self.assertEqual(mba, maa) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4172 self.assertEqual(mbb, mab) |
|
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
4173 |
|
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
4174 |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
4175 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
| 104 | 4176 def test_httpClient_lua(self): |
| 496 | 4177 retries = 4 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4178 result = '' |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4179 |
| 104 | 4180 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
| 496 | 4181 scriptContent = f.read() |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4182 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4183 while retries > 0 and not ('OK' in result): |
| 496 | 4184 print("Executing lua script HttpClient.lua") |
| 4185 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4186 retries -= 1 |
| 102 | 4187 |
| 4188 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4189 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4190 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4191 def test_bitbucket_issue_44(self): |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4192 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4193 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4194 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4195 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4196 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4197 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4198 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4199 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4200 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4201 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4202 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4203 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4204 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4205 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4206 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4207 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4208 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4209 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4210 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4211 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4212 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4213 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4214 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4215 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4216 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4217 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4218 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4219 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4220 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4221 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4222 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4223 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4224 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4225 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4226 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4227 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4228 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4229 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4230 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4231 def test_bitbucket_issue_42(self): |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4232 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 4233 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4234 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4235 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4236 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 4237 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4238 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4239 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4240 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4241 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4242 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4243 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4244 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4245 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4246 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4247 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4248 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4249 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4250 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4251 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4252 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4253 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4254 # Check using BRAINIX |
| 667 | 4255 # The tests below correspond to "isSimpleLookup_ == true" in "ResourceFinder" |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4256 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4257 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4258 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4259 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4260 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4261 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4262 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4263 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4264 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4265 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4266 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4267 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4268 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4269 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4270 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4271 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4272 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4273 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4274 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4275 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4276 |
|
665
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4277 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4278 'Query' : { 'PatientName' : 'B*' }, |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4279 'Limit' : 0 }) # This is an arbitrary convention |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4280 self.assertEqual(4, len(a)) |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4281 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4282 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4283 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4284 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4285 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4286 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4287 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4288 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4289 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4290 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4291 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4292 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4293 |
|
665
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4294 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4295 'Query' : { 'PatientName' : 'B*' }, |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4296 'Limit' : 1, |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4297 'Since' : 4 }) |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4298 self.assertEqual(0, len(a)) |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4299 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4300 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4301 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4302 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4303 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4304 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4305 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4306 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4307 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4308 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4309 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4310 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4311 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4312 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4313 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4314 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4315 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4316 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4317 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4318 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4319 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4320 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4321 |
| 667 | 4322 # Now test "isSimpleLookup_ == false" |
| 4323 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4324 'Query' : { 'PatientPosition' : '*' }}) | |
| 4325 self.assertEqual(3, len(a)) | |
| 4326 | |
| 4327 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4328 'Query' : { 'PatientPosition' : '*' }, | |
| 4329 'Limit' : 0}) | |
| 4330 self.assertEqual(3, len(b)) | |
| 4331 self.assertEqual(a[0], b[0]) | |
| 4332 self.assertEqual(a[1], b[1]) | |
| 4333 self.assertEqual(a[2], b[2]) | |
| 4334 | |
| 4335 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4336 'Query' : { 'PatientPosition' : '*' }, | |
| 4337 'Limit' : 1}) | |
| 4338 self.assertEqual(1, len(b)) | |
| 4339 self.assertEqual(a[0], b[0]) | |
| 4340 | |
| 4341 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4342 'Query' : { 'PatientPosition' : '*' }, | |
| 4343 'Since' : 0, | |
| 4344 'Limit' : 1}) | |
| 4345 self.assertEqual(1, len(b)) | |
| 4346 self.assertEqual(a[0], b[0]) | |
| 4347 | |
| 4348 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4349 'Query' : { 'PatientPosition' : '*' }, | |
| 4350 'Since' : 0, | |
| 4351 'Limit' : 3}) | |
| 4352 self.assertEqual(3, len(b)) | |
| 4353 self.assertEqual(a[0], b[0]) | |
| 4354 self.assertEqual(a[1], b[1]) | |
| 4355 self.assertEqual(a[2], b[2]) | |
| 4356 | |
| 4357 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4358 'Query' : { 'PatientPosition' : '*' }, | |
| 4359 'Since' : 0, | |
| 4360 'Limit' : 4}) | |
| 4361 self.assertEqual(3, len(b)) | |
| 4362 self.assertEqual(a[0], b[0]) | |
| 4363 self.assertEqual(a[1], b[1]) | |
| 4364 self.assertEqual(a[2], b[2]) | |
| 4365 | |
| 4366 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4367 'Query' : { 'PatientPosition' : '*' }, | |
| 4368 'Since' : 1, | |
| 4369 'Limit' : 1}) | |
| 4370 self.assertEqual(1, len(b)) | |
| 4371 self.assertEqual(a[1], b[0]) | |
| 4372 | |
| 4373 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4374 'Query' : { 'PatientPosition' : '*' }, | |
| 4375 'Since' : 1, | |
| 4376 'Limit' : 2}) | |
| 4377 self.assertEqual(2, len(b)) | |
| 4378 self.assertEqual(a[1], b[0]) | |
| 4379 self.assertEqual(a[2], b[1]) | |
| 4380 | |
| 4381 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4382 'Query' : { 'PatientPosition' : '*' }, | |
| 4383 'Since' : 1, | |
| 4384 'Limit' : 3}) | |
| 4385 self.assertEqual(2, len(b)) | |
| 4386 self.assertEqual(a[1], b[0]) | |
| 4387 self.assertEqual(a[2], b[1]) | |
| 4388 | |
| 4389 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4390 'Query' : { 'PatientPosition' : '*' }, | |
| 4391 'Since' : 2, | |
| 4392 'Limit' : 1}) | |
| 4393 self.assertEqual(1, len(b)) | |
| 4394 self.assertEqual(a[2], b[0]) | |
| 4395 | |
| 4396 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4397 'Query' : { 'PatientPosition' : '*' }, | |
| 4398 'Since' : 2, | |
| 4399 'Limit' : 2}) | |
| 4400 self.assertEqual(1, len(b)) | |
| 4401 self.assertEqual(a[2], b[0]) | |
| 4402 | |
| 4403 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4404 'Query' : { 'PatientPosition' : '*' }, | |
| 4405 'Since' : 3, | |
| 4406 'Limit' : 1}) | |
| 4407 self.assertEqual(0, len(b)) | |
| 4408 | |
| 4409 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4410 'Query' : { 'PatientPosition' : '*' }, | |
| 4411 'Since' : 3, | |
| 4412 'Limit' : 10}) | |
| 4413 self.assertEqual(0, len(b)) | |
| 4414 | |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4415 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4416 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4417 # "PHI remaining after anonymization" |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4418 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4419 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4420 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4421 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4422 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4423 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4424 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4425 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4426 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4427 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4428 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4429 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4430 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4431 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4432 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4433 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4434 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4435 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
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parents:
113
diff
changeset
|
4436 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4437 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4438 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4439 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4440 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4441 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4442 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4443 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
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parents:
113
diff
changeset
|
4444 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
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parents:
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diff
changeset
|
4445 |
|
45ebfab035b7
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diff
changeset
|
4446 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
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diff
changeset
|
4447 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4448 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
4449 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
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parents:
113
diff
changeset
|
4450 self.assertFalse('0010,1060' in tags) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4451 |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4452 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4453 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
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diff
changeset
|
4454 t[value['Name']] = value['Value'] |
|
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test_bitbucket_issue_46
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diff
changeset
|
4455 |
|
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test_bitbucket_issue_46
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diff
changeset
|
4456 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4457 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4458 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4459 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4460 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4461 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4462 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4463 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4464 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4465 f.flush() |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4466 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4467 stderr = subprocess.STDOUT).split('\n') |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4468 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4469 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4470 def test_bitbucket_issue_55(self): |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4471 def Run(modify, query): |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4472 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4473 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4474 operation = 'modify' if modify else 'anonymize' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4475 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4476 self.assertRaises(Exception, lambda: DoPost( |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4477 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4478 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4479 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4480 query["Force"] = True |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4481 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
117
diff
changeset
|
4482 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
117
diff
changeset
|
4483 DoDelete(_REMOTE, a) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4484 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4485 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4486 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4487 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4488 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4489 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4490 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4491 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4492 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4493 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4494 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4495 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4496 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4497 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4498 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4499 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4500 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4501 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4502 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4503 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4504 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4505 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4506 # is set to "false" (default value). |
|
589
47b87c87213b
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Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4507 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4508 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4509 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4510 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4511 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4512 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4513 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4514 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4515 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4516 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4517 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4518 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4519 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4520 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4521 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4522 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4523 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4524 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4525 |
| 533 | 4526 # SpecificCharacterSet = ISO_IR 100 (Latin1), PatientName=Test-éüäöò |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4527 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4528 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4529 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4530 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4531 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4532 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4533 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4534 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4535 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4536 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4537 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4538 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4539 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4540 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4541 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4542 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4543 |
| 125 | 4544 |
| 4545 def test_gbk_alias(self): | |
| 4546 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4547 # This test fails on Orthanc <= 1.3.0 | |
| 4548 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4549 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4550 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4551 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4552 |
| 4553 | |
| 4554 def test_long_tag(self): | |
| 4555 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4556 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4557 | |
| 4558 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4559 self.assertTrue('0018,1020' in tags) | |
| 4560 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4561 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4562 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4563 | |
| 4564 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4565 self.assertTrue('0018,1020' in tags) | |
| 4566 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4567 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4568 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4569 | |
| 4570 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4571 self.assertTrue('SoftwareVersions' in tags) | |
| 4572 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4573 self.assertTrue('HeartRate' in tags) | |
| 4574 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4575 | |
| 4576 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4577 self.assertTrue('SoftwareVersions' in tags) | |
| 4578 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4579 | |
| 4580 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4581 self.assertTrue('SoftwareVersions' in tags) | |
| 4582 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4583 | |
| 4584 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4585 self.assertTrue('SoftwareVersions' in tags) | |
| 4586 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4587 | |
| 4588 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4589 self.assertEqual(1, len(tags)) | |
| 4590 self.assertTrue(i in tags.keys()) | |
| 4591 self.assertTrue('0018,1020' in tags[i]) | |
| 4592 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4593 | |
| 4594 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4595 self.assertEqual(1, len(tags)) | |
| 4596 self.assertTrue(i in tags.keys()) | |
| 4597 self.assertTrue('0018,1020' in tags[i]) | |
| 4598 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4599 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4600 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4601 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4602 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4603 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4604 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4605 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4606 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4607 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4608 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4609 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4610 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4611 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4612 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4613 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4614 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4615 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4616 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4617 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4618 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4619 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4620 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4621 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4622 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4623 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4624 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4625 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4626 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4627 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4628 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4629 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4630 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4631 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4632 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4633 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4634 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4635 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4636 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4637 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4638 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4639 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4640 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4641 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4642 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4643 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4644 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4645 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4646 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4647 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4648 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4649 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4650 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4651 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4652 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4653 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4654 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4655 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4656 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4657 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4658 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4659 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4660 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4661 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4662 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4663 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4664 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4665 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4666 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4667 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4668 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4669 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4670 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4671 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4672 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4673 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4674 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4675 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4676 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4677 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4678 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4679 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4680 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4681 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4682 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4683 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4684 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4685 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4686 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4687 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4688 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4689 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4690 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4691 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4692 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4693 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4694 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4695 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4696 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4697 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4698 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4699 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4700 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4701 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4702 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4703 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4704 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4705 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4706 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4707 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4708 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4709 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4710 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4711 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4712 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4713 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4714 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4715 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4716 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4717 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4718 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4719 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4720 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4721 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4722 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4723 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4724 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4725 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4726 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4727 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4728 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4729 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4730 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4731 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4732 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4733 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4734 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4735 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4736 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4737 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4738 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4739 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4740 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4741 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4742 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4743 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4744 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4745 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4746 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4747 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4748 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4749 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4750 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4751 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4752 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4753 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4754 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4755 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4756 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4757 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4758 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4759 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4760 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4761 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4762 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4763 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4764 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4765 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4766 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4767 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4768 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4769 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4770 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4771 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4772 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4773 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4774 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4775 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4776 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4777 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4778 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4779 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4780 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4781 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4782 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4783 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4784 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4785 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4786 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4787 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4788 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4789 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4790 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4791 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4792 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4793 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4794 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4795 |
|
5de178abe4d8
test_bitbucket_issue_94
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changeset
|
4796 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
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test_bitbucket_issue_94
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changeset
|
4797 |
|
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test_bitbucket_issue_94
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changeset
|
4798 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
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test_bitbucket_issue_94
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changeset
|
4799 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
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test_bitbucket_issue_94
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|
4800 |
|
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test_bitbucket_issue_94
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changeset
|
4801 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
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test_bitbucket_issue_94
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changeset
|
4802 |
|
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test_bitbucket_issue_94
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changeset
|
4803 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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changeset
|
4804 self.assertEqual(1, len(a)) |
|
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changeset
|
4805 |
|
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test_bitbucket_issue_94
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diff
changeset
|
4806 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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changeset
|
4807 self.assertEqual(1, len(b)) |
|
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test_bitbucket_issue_94
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diff
changeset
|
4808 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4809 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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diff
changeset
|
4810 self.assertEqual(1, len(c)) |
|
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test_bitbucket_issue_94
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changeset
|
4811 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4812 self.assertEqual(a, b) # Modified DICOM |
|
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test_bitbucket_issue_94
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diff
changeset
|
4813 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4814 |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4815 |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4816 def test_metadata_origin(self): |
|
28d50ffac07d
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|
4817 # Upload using the REST API |
|
144
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changeset
|
4818 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
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changeset
|
4819 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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changeset
|
4820 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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test_metadata_origin
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changeset
|
4821 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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changeset
|
4822 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4823 |
| 4824 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4825 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4826 | |
|
144
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testing metadata?expand
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diff
changeset
|
4827 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
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changeset
|
4828 self.assertEqual('RestApi', m['Origin']) |
|
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diff
changeset
|
4829 self.assertEqual('', m['RemoteAET']) |
|
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testing metadata?expand
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changeset
|
4830 self.assertNotEqual('', m['RemoteIP']) |
|
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testing metadata?expand
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diff
changeset
|
4831 self.assertFalse('CalledAET' in m) |
| 315 | 4832 self.assertTrue('HttpUsername' in m) |
| 4833 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
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testing metadata?expand
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diff
changeset
|
4834 |
|
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testing metadata?expand
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diff
changeset
|
4835 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
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testing metadata?expand
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diff
changeset
|
4836 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
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testing metadata?expand
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changeset
|
4837 self.assertEqual('1', m['IndexInSeries']) |
|
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testing metadata?expand
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diff
changeset
|
4838 self.assertTrue('ReceptionDate' in m) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4839 |
|
143
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4840 DoDelete(_REMOTE, '/instances/%s' % i) |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4841 |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4842 # Upload using the DICOM protocol |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4843 subprocess.check_call([ FindExecutable('storescu'), |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4844 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
144
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4845 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4846 '-xw' ]) # Propose JPEG2000 |
|
143
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test_metadata_origin
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diff
changeset
|
4847 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4848 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4849 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4850 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4851 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
144
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testing metadata?expand
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parents:
143
diff
changeset
|
4852 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4853 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4854 self.assertEqual('DicomProtocol', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4855 self.assertEqual('STORESCU', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
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parents:
143
diff
changeset
|
4856 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4857 self.assertEqual('ANY-SCP', m['CalledAET']) |
|
7809fdf8056f
testing metadata?expand
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parents:
143
diff
changeset
|
4858 self.assertFalse('HttpUsername' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4859 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4860 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4861 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4862 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
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parents:
143
diff
changeset
|
4863 self.assertTrue('ReceptionDate' in m) |
| 147 | 4864 |
| 4865 | |
| 4866 def test_lua_deadlock(self): | |
| 4867 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4868 # is with the lua script I'm using for conversion of images to | |
| 4869 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4870 # instance appears to be stored and then everything just | |
| 4871 # halts, ie Orthanc wont respond to anything after that." | |
| 4872 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4873 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4874 |
| 4875 subprocess.check_call([ FindExecutable('storescu'), | |
| 4876 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4877 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4878 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4879 ]) | |
| 4880 | |
| 4881 instances = DoGet(_REMOTE, '/instances') | |
| 4882 self.assertEqual(2, len(instances)) | |
| 4883 | |
| 4884 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4885 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4886 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4887 self.assertEqual(t1, t2); |
|
154
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4888 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4889 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4890 def test_find_group_length(self): |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4891 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4892 # one of the Generic Group Length tags (*, 0x0000) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4893 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4894 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4895 self.assertFalse('UnableToProcess' in result) |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4896 self.assertFalse('E:' in result) |
|
179
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177
diff
changeset
|
4897 |
|
8a2dd77d4035
testing split/merge
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177
diff
changeset
|
4898 |
|
8a2dd77d4035
testing split/merge
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diff
changeset
|
4899 def test_split(self): |
|
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diff
changeset
|
4900 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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diff
changeset
|
4901 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
254
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diff
changeset
|
4902 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
|
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diff
changeset
|
4903 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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diff
changeset
|
4904 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
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diff
changeset
|
4905 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
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diff
changeset
|
4906 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
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diff
changeset
|
4907 |
|
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diff
changeset
|
4908 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
changeset
|
4909 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
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diff
changeset
|
4910 |
|
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diff
changeset
|
4911 info = DoGet(_REMOTE, '/studies/%s' % study) |
|
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diff
changeset
|
4912 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
|
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diff
changeset
|
4913 |
|
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diff
changeset
|
4914 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
4915 (_REMOTE, '/studies/%s/split' % study, { |
|
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diff
changeset
|
4916 'Series' : [ t2 ], |
|
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diff
changeset
|
4917 'Replace' : { 'PatientName' : 'Hello' }, |
|
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diff
changeset
|
4918 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4919 'KeepSource' : False, |
| 4920 'Asynchronous' : True | |
|
179
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|
4921 })) |
|
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changeset
|
4922 |
|
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4923 self.assertNotEqual(None, job) |
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4924 |
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4925 studies = set(DoGet(_REMOTE, '/studies')) |
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4926 self.assertEqual(2, len(studies)) |
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4927 |
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4928 series = set(DoGet(_REMOTE, '/series')) |
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4929 self.assertEqual(2, len(series)) |
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4930 self.assertTrue(t1 in series) |
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4931 |
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|
4932 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4933 self.assertTrue(study in studies) |
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4934 self.assertTrue(study2 in studies) |
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4935 |
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4936 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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4937 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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4938 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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4939 |
|
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4940 sopInstanceUids = set() |
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4941 for i in DoGet(_REMOTE, '/instances?expand'): |
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4942 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4943 |
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4944 self.assertTrue(knee1Sop in sopInstanceUids) |
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4945 |
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4946 # Fails if Orthanc <= 1.5.7 |
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4947 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4948 |
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4949 # One original instance is kept, another one is added because of the split |
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4950 self.assertEqual(2, len(sopInstanceUids)) |
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4951 |
|
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4952 |
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|
4953 def test_merge(self): |
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4954 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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4955 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
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4956 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4957 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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4958 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4959 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4960 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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4961 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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4962 |
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4963 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4964 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4965 |
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|
4966 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4967 (_REMOTE, '/studies/%s/merge' % knee, { |
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4968 'Resources' : [ brainix ], |
| 181 | 4969 'KeepSource' : True, |
| 4970 'Synchronous' : False | |
|
179
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4971 })) |
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|
4972 |
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|
4973 self.assertNotEqual(None, job) |
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|
4974 |
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|
4975 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4976 self.assertEqual(2, len(studies)) |
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|
4977 self.assertTrue(knee in studies) |
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|
4978 self.assertTrue(brainix in studies) |
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|
4979 |
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|
4980 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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|
4981 self.assertTrue(t1 in series) |
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|
4982 series.remove(t1) |
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|
4983 self.assertEqual(1, len(series)) |
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|
4984 |
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|
4985 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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|
4986 self.assertEqual(1, len(instances)) |
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|
4987 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4988 |
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|
4989 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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|
4990 self.assertEqual(1, len(instances)) |
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4991 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4992 |
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|
4993 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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|
4994 self.assertEqual(1, len(instances)) |
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4995 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4996 |
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|
4997 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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|
4998 |
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|
4999 for key in tags['PatientMainDicomTags']: |
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|
5000 self.assertEqual(a[key], merged[key]) |
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5001 if (key in b and key != 'PatientSex'): |
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5002 self.assertNotEqual(a[key], b[key]) |
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|
5003 |
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|
5004 for key in tags['MainDicomTags']: |
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|
5005 # Not in the patient/study module |
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5006 if (not key in [ 'InstitutionName', |
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|
5007 'RequestingPhysician', |
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5008 'RequestedProcedureDescription', ]): |
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5009 self.assertEqual(a[key], merged[key]) |
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5010 if (key in b): |
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5011 self.assertNotEqual(a[key], b[key]) |
|
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|
5012 |
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|
5013 sopInstanceUids = set() |
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|
5014 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
5015 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
5016 |
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|
5017 self.assertTrue(kneeSop in sopInstanceUids) |
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5018 self.assertTrue(brainixSop in sopInstanceUids) |
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|
5019 |
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|
5020 # Fails if Orthanc <= 1.5.7 |
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|
5021 # The 2 original instances are kept, another one is added because of the merge |
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|
5022 self.assertEqual(3, len(sopInstanceUids)) |
|
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5023 |
| 187 | 5024 |
| 5025 def test_async_archive(self): | |
| 5026 # Testing the asynchronous generation of archives/medias (new | |
| 5027 # in Orthanc 1.4.3) | |
| 5028 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 5029 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 5030 | |
| 5031 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 5032 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 5033 | |
| 5034 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 508 | 5035 (_REMOTE, '/series/%s/archive' % kneeT1, { |
| 187 | 5036 'Synchronous' : False |
| 5037 })) | |
| 5038 | |
| 5039 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5040 self.assertEqual(1, len(z.namelist())) | |
| 5041 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 5042 | |
|
354
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|
5043 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
5044 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
|
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5045 self.assertEqual(1, info['Content']['InstancesCount']) |
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5046 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5047 |
| 187 | 5048 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 508 | 5049 (_REMOTE, '/series/%s/media' % kneeT1, { |
| 187 | 5050 'Synchronous' : False |
| 5051 })) | |
| 5052 | |
| 5053 # The archive from the first job has been replaced by the | |
| 5054 # archive from second job (as MediaArchiveSize == 1) | |
| 5055 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 5056 | |
| 5057 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 5058 self.assertEqual(2, len(z.namelist())) | |
| 5059 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 5060 | |
|
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5061 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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5062 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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5063 self.assertEqual(1, info['Content']['InstancesCount']) |
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5064 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5065 |
| 187 | 5066 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 5067 (_REMOTE, '/tools/create-archive', { | |
| 5068 'Synchronous' : False, | |
| 5069 'Resources' : [ kneeT1, kneeT2 ], | |
| 5070 })) | |
| 5071 | |
| 5072 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5073 self.assertEqual(2, len(z.namelist())) | |
| 5074 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 5075 | |
|
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5076 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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5077 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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5078 self.assertEqual(2, info['Content']['InstancesCount']) |
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5079 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5080 |
| 187 | 5081 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 5082 (_REMOTE, '/tools/create-media', { | |
| 5083 'Synchronous' : False, | |
| 5084 'Resources' : [ kneeT1, kneeT2 ], | |
| 5085 })) | |
| 5086 | |
| 5087 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5088 self.assertEqual(3, len(z.namelist())) | |
| 5089 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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5090 |
|
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5091 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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5092 self.assertEqual(2, info['Content']['InstancesCount']) |
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5093 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5094 |
| 187 | 5095 |
|
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5096 def test_archive_job_delete_output(self): |
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5097 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
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5098 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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5099 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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5100 |
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5101 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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5102 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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5103 |
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5104 job = MonitorJob2(_REMOTE, lambda: DoPost |
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5105 (_REMOTE, '/series/%s/archive' % kneeT1, { |
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5106 'Synchronous' : False |
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5107 })) |
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5108 |
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5109 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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5110 # delete the output |
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5111 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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5112 # make sure it is not available anymore afterwards |
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5113 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
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5114 |
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5115 # repeat with another resource/job |
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5116 job = MonitorJob2(_REMOTE, lambda: DoPost |
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5117 (_REMOTE, '/series/%s/archive' % kneeT2, { |
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5118 'Synchronous' : False |
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5119 })) |
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5120 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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5121 # delete the output |
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5122 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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5123 # make sure it is not available anymore afterwards |
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5124 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
| 572 | 5125 # job is still available |
| 5126 DoGet(_REMOTE, '/jobs/%s' % job) | |
| 5127 | |
| 5128 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 5129 # delete the job itself | |
| 5130 DoDelete(_REMOTE, '/jobs/%s' % job) | |
| 5131 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/jobs/%s' % job)) | |
| 5132 | |
| 5133 # test deletion of jobs in history | |
| 5134 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 5135 (_REMOTE, '/series/%s/archive' % kneeT2, { | |
| 5136 'Synchronous' : False | |
| 5137 })) | |
| 5138 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5139 # delete the job itself | |
| 5140 DoDelete(_REMOTE, '/jobs/%s' % job) | |
| 5141 # make sure it is not available anymore afterwards (and its output is not available either) | |
| 5142 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/jobs/%s' % job)) | |
| 5143 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
|
540
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5144 |
|
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|
5145 |
|
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5146 def test_queries_hierarchy(self): |
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5147 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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5148 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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5149 |
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|
5150 tags = { |
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5151 'NumberOfPatientRelatedInstances' : '', |
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5152 'NumberOfPatientRelatedSeries' : '', |
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5153 'NumberOfPatientRelatedStudies' : '', |
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5154 'NumberOfStudyRelatedInstances' : '', |
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5155 'NumberOfStudyRelatedSeries' : '', |
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5156 'NumberOfSeriesRelatedInstances' : '', |
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5157 } |
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5158 |
|
189
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5159 tags2 = copy.copy(tags) |
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5160 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
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5161 |
|
188
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5162 patient = DoPost(_REMOTE, '/modalities/self/query', { |
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5163 'Level' : 'Patient', |
|
189
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5164 'Query' : tags2 |
|
188
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5165 }) ['ID'] |
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5166 |
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5167 study = DoPost(_REMOTE, '/modalities/self/query', { |
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5168 'Level' : 'Study', |
|
189
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5169 'Query' : tags2 |
|
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5170 }) ['ID'] |
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5171 |
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5172 series = DoPost(_REMOTE, '/modalities/self/query', { |
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5173 'Level' : 'Series', |
|
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5174 'Query' : tags2 |
|
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5175 }) ['ID'] |
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5176 |
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5177 instance = DoPost(_REMOTE, '/modalities/self/query', { |
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5178 'Level' : 'Instance', |
|
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5179 'Query' : tags2 |
|
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5180 }) ['ID'] |
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5181 |
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5182 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
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5183 self.assertEqual(1, len(p)) |
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5184 self.assertEqual('887', p[0]['PatientID']) |
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5185 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
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5186 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
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5187 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
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5188 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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5189 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
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5190 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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5191 |
|
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new test: test_queries_hierarchy
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diff
changeset
|
5192 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5193 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
5194 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
5195 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
5196 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
5197 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
5198 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5199 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5200 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5201 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5202 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5203 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5204 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5205 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5206 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5207 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5208 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5209 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5210 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5211 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5212 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5213 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5214 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5215 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5216 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5217 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5218 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5219 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5220 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5221 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5222 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5223 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5224 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5225 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5226 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5227 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5228 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5229 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5230 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5231 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5232 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5233 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5234 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5235 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5236 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5237 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5238 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5239 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5240 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5241 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5242 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5243 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5244 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5245 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5246 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5247 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5248 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5249 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5250 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5251 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5252 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5253 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5254 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5255 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5256 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5257 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5258 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5259 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5260 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5261 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5262 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5263 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5264 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5265 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5266 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5267 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5268 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5269 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5270 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5271 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5272 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5273 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5274 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5275 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5276 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5277 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5278 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5279 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5280 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5281 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5282 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5283 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5284 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5285 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5286 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5287 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5288 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5289 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5290 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5291 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5292 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5293 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5294 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5295 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5296 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5297 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5298 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5299 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5300 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5301 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5302 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5303 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5304 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5305 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5306 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5307 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5308 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5309 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5310 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5311 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5312 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5313 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5314 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5315 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5316 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5317 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5318 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5319 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5320 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5321 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5322 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5323 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5324 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5325 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5326 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5327 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5328 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5329 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5330 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5331 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5332 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5333 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5334 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5335 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5336 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5337 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5338 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5339 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5340 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5341 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5342 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5343 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5344 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5345 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5346 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5347 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5348 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5349 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5350 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5351 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5352 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5353 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5354 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5355 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5356 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5357 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5358 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5359 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5360 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5361 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5362 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5363 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5364 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5365 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5366 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5367 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5368 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5369 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5370 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5371 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5372 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5373 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5374 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5375 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5376 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5377 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5378 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5379 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5380 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
| 508 | 5381 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
| 5382 | |
| 5383 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5384 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5385 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5386 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5387 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5388 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5389 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5390 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5391 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5392 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5393 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5394 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5395 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5396 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5397 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5398 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5399 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5400 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5401 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5402 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5403 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5404 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5405 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5406 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5407 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5408 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5409 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5410 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5411 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5412 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5413 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5414 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5415 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5416 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5417 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5418 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5419 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5420 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5421 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5422 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5423 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5424 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5425 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5426 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5427 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5428 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5429 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5430 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5431 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5432 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5433 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5434 self.assertEqual(0, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5435 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5436 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5437 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5438 self.assertEqual(1, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5439 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5440 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5441 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5442 self.assertEqual(1, len(a)) |
| 211 | 5443 |
| 5444 | |
| 5445 def test_series_status(self): | |
| 5446 def HasCompletedInChanges(): | |
| 5447 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 5448 if c['ChangeType'] == 'CompletedSeries': | |
| 5449 return True; | |
| 5450 | |
| 5451 return False | |
| 5452 | |
| 5453 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 5454 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 5455 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5456 self.assertFalse(HasCompletedInChanges()) | |
| 5457 | |
| 5458 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 5459 | |
| 5460 for i in range(3): | |
| 5461 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 5462 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5463 self.assertFalse(HasCompletedInChanges()) | |
| 5464 | |
| 5465 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 5466 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5467 self.assertTrue(HasCompletedInChanges()) | |
| 5468 | |
| 5469 DoDelete(_REMOTE, '/changes') | |
| 5470 self.assertFalse(HasCompletedInChanges()) | |
| 5471 | |
| 5472 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 5473 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5474 self.assertFalse(HasCompletedInChanges()) | |
| 5475 | |
| 215 | 5476 |
| 5477 def test_dicomweb(self): | |
| 5478 def Compare(dicom, reference): | |
| 5479 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5480 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 5481 headers = { 'Accept' : 'application/dicom+json' }) | |
| 5482 with open(GetDatabasePath(reference), 'rb') as c: | |
| 5483 d = json.load(c) | |
| 220 | 5484 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 5485 |
| 5486 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 5487 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 5488 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 5489 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 5490 |
| 5491 | |
| 5492 def test_issue_95_encodings(self): | |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5493 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 5494 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 5495 | |
| 5496 # Very useful tool: "file2" from package "file-kanji" | |
| 5497 | |
| 5498 def GetPatientName(dicom): | |
| 5499 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5500 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 5501 return j['PatientName'] | |
| 5502 | |
| 5503 def ComparePatientName(name, dicom): | |
| 5504 self.assertEqual(name, GetPatientName(dicom)) | |
| 5505 | |
| 5506 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5507 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 5508 | |
| 5509 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 5510 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 5511 | |
| 5512 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 5513 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 5514 | |
| 5515 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 5516 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 5517 | |
| 5518 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 5519 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 5520 | |
| 5521 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5522 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 5523 | |
| 5524 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 5525 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 5526 | |
| 5527 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 5528 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 5529 | |
| 5530 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 5531 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 5532 # Linux console into Emacs automatically reverse the string | |
| 5533 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 5534 | |
| 5535 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 5536 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 5537 # characters by default, but copy/paste works with Emacs | |
| 5538 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 5539 | |
| 5540 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 5541 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 5542 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 5543 # remainer. Orthanc only takes into consideration the first | |
| 5544 # codepage: This is a limitation. | |
| 5545 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 5546 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
218
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diff
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|
5547 |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5548 |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5549 def test_findscu_missing_tags(self): |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5550 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5551 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5552 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
|
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
5553 |
| 669 | 5554 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'PatientName', '-k', 'Rows', '-k', 'Columns' ]) |
|
218
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test_findscu_missing_tags
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parents:
217
diff
changeset
|
5555 |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5556 # We have 2 instances... |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5557 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5558 self.assertEqual(2, len(patientNames)) |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5559 self.assertEqual('KNIX', patientNames[0]) |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5560 self.assertEqual('KNIX', patientNames[1]) |
| 669 | 5561 |
| 5562 columns = re.findall('\(0028,0011\) US ([0-9]+)', i) | |
| 5563 self.assertEqual(2, len(columns)) | |
| 5564 self.assertEqual('512', columns[0]) | |
| 5565 self.assertEqual('512', columns[1]) | |
|
218
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parents:
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diff
changeset
|
5566 |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5567 # ...but only 1 value for the "Rows" tag |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5568 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5569 self.assertEqual(1, len(rows)) |
|
70fba41776be
test_findscu_missing_tags
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parents:
217
diff
changeset
|
5570 self.assertEqual('512', rows[0]) |
|
219
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5571 |
|
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test_bitbucket_issue_131
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diff
changeset
|
5572 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5573 |
|
00e5aeea33dd
test_bitbucket_issue_131
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diff
changeset
|
5574 def test_bitbucket_issue_131(self): |
|
00e5aeea33dd
test_bitbucket_issue_131
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diff
changeset
|
5575 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
|
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diff
changeset
|
5576 # StudyInstanceUID in it's database." |
|
589
47b87c87213b
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Alain Mazy <am@osimis.io>
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588
diff
changeset
|
5577 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
219
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5578 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5579 # Insert 2 instances, with the same StudyInstanceUID, but with |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5580 # different patient IDs. Orthanc will create 2 distincts |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5581 # patients, and the hierarchy of resources above the two |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5582 # instances will be fully disjoint. |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5583 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5584 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5585 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5586 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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diff
changeset
|
5587 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5588 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5589 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5590 'Level' : 'Study', |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5591 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5592 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5593 # 1 study is matched |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5594 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5595 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5596 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5597 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5598 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5599 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5600 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5601 # The two studies are matched, as we made the request at the |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5602 # Study level, thus the shared StudyInstanceUID is used as the key |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5603 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5604 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5605 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5606 # Match the 2 studies |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5607 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5608 'Level' : 'Study', |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5609 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5610 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5611 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5612 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5613 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5614 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5615 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5616 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5617 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5618 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5619 # Same test, at the patient level => only 1 instance is transfered |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5620 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5621 'Level' : 'Patient', |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5622 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5623 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5624 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5625 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5626 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5627 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5628 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5629 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5630 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5631 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5632 # Same test, at the series level => only 1 instance is transfered |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5633 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5634 'Level' : 'Series', |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5635 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5636 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5637 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5638 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5639 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5640 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5641 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5642 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5643 |
|
233
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5644 |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5645 def test_bitbucket_issue_136(self): |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5646 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5647 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5648 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5649 self.assertEqual(1, len(patientNames)) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5650 self.assertEqual('John Doe', patientNames[0]) |
|
234
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5651 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5652 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5653 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5654 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5655 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5656 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5657 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5658 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5659 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5660 'application/json')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5661 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5662 self.assertEqual(2, len(series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5663 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5664 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5665 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5666 self.assertEqual(1, len(cr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5667 self.assertEqual(1, len(pr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5668 self.assertEqual(1, len(cr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5669 self.assertEqual(1, len(pr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
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233
diff
changeset
|
5670 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5671 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5672 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5673 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5674 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
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233
diff
changeset
|
5675 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5676 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5677 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
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233
diff
changeset
|
5678 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5679 # This fails on Orthanc <= 1.5.6 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5680 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
93cd4fdd4a67
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diff
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|
5681 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
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parents:
234
diff
changeset
|
5682 |
|
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diff
changeset
|
5683 |
|
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|
5684 def test_anonymize_relationships_5(self): |
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|
5685 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
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5686 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
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5687 oStudyId = ct1['ParentStudy'] |
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|
5688 oCtInstanceId = ct1['ID'] |
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|
5689 oRtInstanceId = rt1['ID'] |
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|
5690 |
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|
5691 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
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|
5692 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
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|
5693 |
|
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|
5694 # first validate the relationships in the source data |
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|
5695 oStudyUID = oCtTags['StudyInstanceUID'] |
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|
5696 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
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|
5697 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
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diff
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|
5698 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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|
5699 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
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|
5700 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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|
5701 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
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|
5702 |
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|
5703 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
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|
5704 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
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diff
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|
5705 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
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changeset
|
5706 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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|
5707 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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|
5708 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5709 |
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|
5710 ### anonymize |
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changeset
|
5711 |
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|
5712 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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|
5713 'application/json')['ID'] |
|
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changeset
|
5714 |
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changeset
|
5715 ### validate |
|
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|
5716 |
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changeset
|
5717 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
|
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|
5718 self.assertEqual(2, len(aSeries)) |
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changeset
|
5719 |
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diff
changeset
|
5720 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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diff
changeset
|
5721 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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diff
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|
5722 aCtInstanceId = aCt[0]['Instances'][0] |
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|
5723 aRtInstanceId = aRt[0]['Instances'][0] |
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|
5724 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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|
5725 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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|
5726 |
|
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changeset
|
5727 # now validate the relationships in the anonymized data |
|
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changeset
|
5728 aStudyUID = aCtTags['StudyInstanceUID'] |
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changeset
|
5729 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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changeset
|
5730 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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changeset
|
5731 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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changeset
|
5732 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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diff
changeset
|
5733 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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diff
changeset
|
5734 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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diff
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|
5735 |
|
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diff
changeset
|
5736 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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diff
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|
5737 # make sure all UIDs have been updated |
|
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changeset
|
5738 self.assertNotEqual(oStudyUID, aStudyUID) |
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diff
changeset
|
5739 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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diff
changeset
|
5740 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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diff
changeset
|
5741 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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changeset
|
5742 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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diff
changeset
|
5743 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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diff
changeset
|
5744 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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|
5745 |
|
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diff
changeset
|
5746 # validate the relationships |
|
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diff
changeset
|
5747 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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diff
changeset
|
5748 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5749 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5750 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
255
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diff
changeset
|
5751 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5752 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5753 |
| 256 | 5754 def test_anonymize_relationships_5b(self): |
| 5755 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5756 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5757 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5758 oStudyId = ct1['ParentStudy'] | |
| 5759 oCtInstanceId = ct1['ID'] | |
| 5760 oRtInstanceId = rt1['ID'] | |
| 5761 | |
| 5762 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5763 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5764 | |
| 5765 ### anonymize while forcing the StudyInstanceUID | |
| 5766 | |
| 5767 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5768 'application/json')['ID'] | |
| 5769 | |
| 5770 ### validate | |
| 5771 | |
| 5772 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5773 self.assertEqual(2, len(aSeries)) | |
| 5774 | |
| 5775 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5776 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5777 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5778 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5779 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5780 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5781 | |
| 5782 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5783 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5784 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
255
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|
5785 |
|
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diff
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|
5786 |
|
235
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test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5787 def test_bitbucket_issue_140(self): |
| 266 | 5788 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5789 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5790 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5791 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
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|
5792 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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|
5793 |
|
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diff
changeset
|
5794 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5795 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5796 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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|
5797 }, 'application/json') ['ID'] |
|
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|
5798 |
|
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diff
changeset
|
5799 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
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|
5800 self.assertEqual(1, len(instances)) |
|
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|
5801 |
|
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test_bitbucket_issue_140
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diff
changeset
|
5802 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5803 t = tags['4321,1012'] |
|
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diff
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|
5804 self.assertEqual('String', t['Type']) |
|
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changeset
|
5805 self.assertEqual('RadioButton3', t['Name']) |
|
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diff
changeset
|
5806 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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diff
changeset
|
5807 self.assertEqual('jklmopq', t['Value']) |
|
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diff
changeset
|
5808 |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5809 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
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diff
changeset
|
5810 t = tags['4321,1012'] |
| 327 | 5811 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
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diff
changeset
|
5812 self.assertEqual('RadioButton3', t['Name']) |
|
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diff
changeset
|
5813 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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diff
changeset
|
5814 self.assertEqual('aaabbbccc', t['Value']) |
|
236
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diff
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|
5815 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5816 |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5817 def test_find_normalize(self): |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5818 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5819 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5820 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5821 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5822 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5823 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5824 'Query' : { 'Rows' : '42' } |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5825 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5826 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5827 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5828 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5829 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5830 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5831 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5832 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5833 'Query' : { 'Rows' : '42' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5834 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5835 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5836 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5837 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5838 self.assertEqual(0, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5839 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5840 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5841 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5842 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5843 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5844 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5845 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5846 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5847 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5848 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5849 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5850 |
| 5851 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5852 'Level' : 'Instance', | |
| 5853 'Query' : { 'Rows' : '' }, | |
| 5854 'Normalize' : False | |
| 5855 }) ['ID'] | |
| 5856 | |
| 5857 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5858 self.assertEqual(1, len(b)) | |
| 5859 self.assertTrue('Rows' in b[0]) | |
| 5860 self.assertEqual('512', b[0]['Rows']) | |
| 5861 | |
| 5862 self.assertRaises(Exception, lambda: DoPost( | |
| 5863 _REMOTE, '/modalities/self/query', { | |
| 5864 'Level' : 'Instance', | |
| 5865 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5866 'Normalize' : False | |
| 5867 })) | |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5868 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5869 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5870 def test_bitbucket_issue_141(self): |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5871 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5872 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5873 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5874 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5875 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5876 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5877 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5878 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5879 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5880 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5881 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5882 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5883 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5884 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5885 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5886 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5887 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5888 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5889 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5890 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5891 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5892 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5893 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5894 |
| 5895 | |
| 5896 def test_log_level(self): | |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5897 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5898 original = DoGet(_REMOTE, '/tools/log-level') |
| 5899 | |
| 5900 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5901 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5902 DoGet(_REMOTE, '/system') | |
| 5903 | |
| 5904 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5905 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5906 DoGet(_REMOTE, '/system') | |
| 5907 | |
| 5908 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5909 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5910 DoGet(_REMOTE, '/system') | |
| 5911 | |
| 5912 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5913 | |
| 5914 # Switch back to the original log level | |
| 5915 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5916 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5917 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5918 def test_upload_compressed(self): |
| 265 | 5919 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5920 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5921 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5922 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5923 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5924 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5925 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5926 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5927 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5928 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5929 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5930 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5931 |
| 5932 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5933 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5934 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5935 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5936 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5937 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5938 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5939 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5940 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5941 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5942 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5943 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5944 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5945 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5946 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5947 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5948 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5949 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5950 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5951 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5952 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5953 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5954 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5955 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5956 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5957 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
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262
diff
changeset
|
5958 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5959 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5960 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5961 # is wiped out by the normalization |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5962 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5963 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5964 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5965 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5966 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5967 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5968 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5969 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5970 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5971 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5972 'Query' : { |
| 669 | 5973 'ImageComments' : '*' # Wildcard matching => no match, as the tag is absent |
| 5974 }, | |
| 5975 'Normalize' : False | |
| 5976 })) | |
| 5977 self.assertEqual(1, CountAnswers({ | |
| 5978 'Level' : 'Study', | |
| 5979 'Query' : { | |
| 5980 'ImageComments' : '' | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5981 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5982 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5983 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5984 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5985 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5986 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5987 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5988 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5989 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5990 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5991 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5992 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5993 'Query' : { |
| 669 | 5994 'ImageComments' : '*' # Matches, as wiped out by the normalization |
| 5995 }, | |
| 5996 'Normalize' : True | |
| 5997 })) | |
| 5998 self.assertEqual(1, CountAnswers({ | |
| 5999 'Level' : 'Study', | |
| 6000 'Query' : { | |
| 6001 'ImageComments' : '' | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6002 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6003 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6004 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6005 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6006 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6007 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6008 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6009 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6010 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6011 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6012 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6013 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6014 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6015 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6016 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6017 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6018 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6019 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6020 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6021 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6022 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6023 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6024 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6025 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6026 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6027 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6028 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6029 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6030 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6031 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6032 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6033 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6034 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6035 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6036 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6037 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6038 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6039 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6040 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6041 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6042 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6043 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6044 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6045 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6046 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6047 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6048 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6049 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6050 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6051 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6052 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6053 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6054 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6055 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6056 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6057 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6058 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6059 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6060 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6061 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6062 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6063 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6064 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6065 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6066 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6067 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6068 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6069 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6070 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6071 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6072 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6073 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6074 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6075 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6076 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6077 })) |
|
a2719263fd04
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|
6078 self.assertEqual(1, CountAnswers({ |
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6079 'Level' : 'Study', |
|
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6080 'Query' : { |
|
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6081 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
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6082 }, |
|
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6083 'Normalize' : True |
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|
6084 })) |
|
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6085 self.assertEqual(1, CountAnswers({ |
|
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6086 'Level' : 'Study', |
|
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6087 'Query' : { |
|
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6088 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
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6089 }, |
|
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6090 'Normalize' : True |
|
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|
6091 })) |
|
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|
6092 |
|
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|
6093 for normalize in [ True, False ]: |
|
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6094 # At the series level, the "ProtocolName" tag is allowed, and |
|
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6095 # normalization has no effect |
|
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6096 |
|
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6097 self.assertEqual(1, CountAnswers({ |
|
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|
6098 'Level' : 'Series', |
|
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6099 'Query' : { |
|
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6100 'ProtocolName' : '' # Universal matching |
|
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6101 }, |
|
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|
6102 'Normalize' : normalize, |
|
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6103 })) |
|
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6104 self.assertEqual(0, CountAnswers({ |
|
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6105 'Level' : 'Series', |
|
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|
6106 'Query' : { |
|
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6107 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
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|
6108 }, |
|
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|
6109 'Normalize' : normalize, |
|
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|
6110 })) |
|
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6111 self.assertEqual(0, CountAnswers({ |
|
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6112 'Level' : 'Series', |
|
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|
6113 'Query' : { |
|
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6114 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
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|
6115 }, |
|
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|
6116 'Normalize' : normalize, |
|
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|
6117 })) |
|
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|
6118 |
|
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|
6119 self.assertEqual(1, CountAnswers({ |
|
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|
6120 'Level' : 'Study', |
|
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|
6121 'Query' : { |
|
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|
6122 'ProtocolName' : '' # Universal matching |
|
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|
6123 }, |
|
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|
6124 'Normalize' : normalize, |
|
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|
6125 })) |
|
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|
6126 |
|
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|
6127 |
|
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|
6128 ## |
|
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6129 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
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6130 ## |
|
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|
6131 |
|
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6132 for level in [ 'Study', 'Series' ] : |
|
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|
6133 for normalize in [ True, False ]: |
|
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|
6134 self.assertEqual(1, CountAnswers({ |
|
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|
6135 'Level' : level, |
|
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6136 'Query' : { |
|
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6137 'StudyInstanceUID' : '' # Universal matching |
|
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6138 }, |
|
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|
6139 'Normalize' : normalize, |
|
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|
6140 })) |
|
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|
6141 self.assertEqual(0, CountAnswers({ |
|
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|
6142 'Level' : level, |
|
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|
6143 'Query' : { |
|
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|
6144 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
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|
6145 }, |
|
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|
6146 'Normalize' : normalize, |
|
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|
6147 })) |
|
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|
6148 self.assertEqual(1, CountAnswers({ |
|
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|
6149 'Level' : level, |
|
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|
6150 'Query' : { |
|
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|
6151 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
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|
6152 }, |
|
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|
6153 'Normalize' : normalize, |
|
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|
6154 })) |
|
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|
6155 |
| 269 | 6156 # Wildcard matching is not allowed for this VR |
|
263
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|
6157 # This test fails on Orthanc <= 1.5.8 |
| 269 | 6158 self.assertRaises(Exception, lambda: CountAnswers({ |
|
263
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|
6159 'Level' : level, |
|
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|
6160 'Query' : { |
| 269 | 6161 'StudyInstanceUID' : '*' |
|
263
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|
6162 }, |
|
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|
6163 'Normalize' : normalize, |
|
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|
6164 })) |
| 265 | 6165 |
| 6166 | |
| 6167 def test_rendered(self): | |
| 6168 # New in Orthanc 1.6.0 | |
| 6169 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 6170 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6171 self.assertEqual("RGB", im.mode) | |
| 6172 self.assertEqual(41, im.size[0]) | |
| 6173 self.assertEqual(41, im.size[1]) | |
| 6174 | |
| 6175 # http://effbot.org/zone/pil-comparing-images.htm | |
| 6176 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 6177 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 6178 | |
| 6179 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 6180 self.assertEqual("RGB", im.mode) | |
| 6181 self.assertEqual(10, im.size[0]) | |
| 6182 self.assertEqual(10, im.size[1]) | |
| 6183 | |
| 6184 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 6185 self.assertEqual("RGB", im.mode) | |
| 6186 self.assertEqual(10, im.size[0]) | |
| 6187 self.assertEqual(10, im.size[1]) | |
| 6188 | |
| 6189 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 6190 self.assertEqual("RGB", im.mode) | |
| 6191 self.assertEqual(128, im.size[0]) | |
| 6192 self.assertEqual(128, im.size[1]) | |
| 6193 | |
| 6194 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 6195 self.assertEqual("RGB", im.mode) | |
| 6196 self.assertEqual(10, im.size[0]) | |
| 6197 self.assertEqual(10, im.size[1]) | |
| 6198 | |
| 6199 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 6200 self.assertEqual("RGB", im.mode) | |
| 6201 self.assertEqual(10, im.size[0]) | |
| 6202 self.assertEqual(10, im.size[1]) | |
| 6203 | |
| 6204 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 6205 self.assertEqual("RGB", im.mode) | |
| 6206 self.assertEqual(5, im.size[0]) | |
| 6207 self.assertEqual(5, im.size[1]) | |
| 6208 | |
| 6209 | |
| 6210 # Grayscale image | |
| 6211 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 6212 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6213 self.assertEqual("L", im.mode) | |
| 6214 self.assertEqual(288, im.size[0]) | |
| 6215 self.assertEqual(288, im.size[1]) | |
| 6216 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6217 | |
| 6218 # Those are the original windowing parameters that are written | |
| 6219 # inside the DICOM file | |
| 6220 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 6221 self.assertEqual("L", im2.mode) | |
| 6222 self.assertEqual(288, im2.size[0]) | |
| 6223 self.assertEqual(288, im2.size[1]) | |
| 6224 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 6225 | |
| 6226 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 6227 self.assertEqual("L", im.mode) | |
| 6228 self.assertEqual(512, im.size[0]) | |
| 6229 self.assertEqual(512, im.size[1]) | |
| 6230 | |
| 6231 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 6232 self.assertEqual("L", im.mode) | |
| 6233 self.assertEqual(10, im.size[0]) | |
| 6234 self.assertEqual(10, im.size[1]) | |
| 6235 | |
| 6236 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 6237 self.assertEqual("L", im.mode) | |
| 6238 self.assertEqual(10, im.size[0]) | |
| 6239 self.assertEqual(10, im.size[1]) | |
| 6240 | |
| 6241 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 6242 self.assertEqual("L", im.mode) | |
| 6243 self.assertEqual(1, im.size[0]) | |
| 6244 self.assertEqual(1, im.size[1]) | |
| 6245 self.assertEqual(255, im.getpixel((0, 0))) | |
| 6246 | |
| 6247 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 6248 self.assertEqual("L", im.mode) | |
| 6249 self.assertEqual(1, im.size[0]) | |
| 6250 self.assertEqual(1, im.size[1]) | |
| 6251 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6252 | |
| 6253 | |
| 6254 # Test monochrome 1 | |
| 6255 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 6256 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6257 self.assertEqual("L", im.mode) | |
| 6258 self.assertEqual(2010, im.size[0]) | |
| 6259 self.assertEqual(2446, im.size[1]) | |
| 6260 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6261 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 6262 self.assertEqual("L", im.mode) | |
| 6263 self.assertEqual(20, im.size[0]) | |
| 6264 self.assertEqual(24, im.size[1]) | |
| 6265 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 6266 self.assertEqual("L", im.mode) | |
| 6267 self.assertEqual(20, im.size[0]) | |
| 6268 self.assertEqual(24, im.size[1]) | |
| 6269 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 6270 self.assertEqual("L", im.mode) | |
| 6271 self.assertEqual(10, im.size[0]) | |
| 6272 self.assertEqual(12, im.size[1]) | |
| 6273 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 6274 self.assertEqual("L", im.mode) | |
| 6275 self.assertEqual(20, im.size[0]) | |
| 6276 self.assertEqual(24, im.size[1]) | |
|
268
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6277 |
|
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6278 |
|
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6279 def test_bitbucket_issue_154(self): |
|
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6280 # "Matching against list of UID-s by C-MOVE" |
|
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6281 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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6282 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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6283 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
|
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6284 |
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6285 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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6286 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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6287 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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6288 |
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6289 # C-FIND is working on list of UIDs |
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6290 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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6291 '-k', 'StudyInstanceUID=%s' % study, |
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6292 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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6293 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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6294 self.assertEqual(2, len(series)) |
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6295 self.assertTrue(series1 in series) |
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6296 self.assertTrue(series2 in series) |
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6297 |
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6298 # Individual retrieval is working in Orthanc < 1.6.0 |
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6299 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6300 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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6301 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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6302 '-k', 'StudyInstanceUID=%s' % study, |
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6303 '-k', 'SeriesInstanceUID=%s' % series1, |
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6304 ]))) |
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6305 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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6306 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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6307 '-k', 'StudyInstanceUID=%s' % study, |
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6308 '-k', 'SeriesInstanceUID=%s' % series2, |
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6309 ]))) |
|
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6310 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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6311 |
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6312 DropOrthanc(_LOCAL) |
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6313 |
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6314 # But list matching is working only in Orthanc >= 1.6.0 |
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6315 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6316 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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|
6317 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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6318 '-k', 'StudyInstanceUID=%s' % study, |
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6319 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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6320 ]))) |
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|
6321 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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6322 |
|
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|
6323 |
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6324 def test_storage_commitment_api(self): |
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6325 # Storage commitment is available since Orthanc 1.6.0 |
|
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6326 |
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6327 def WaitTransaction(uid): |
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6328 while True: |
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6329 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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6330 if s['Status'] != 'Pending': |
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|
6331 return s |
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|
6332 else: |
|
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6333 time.sleep(0.01) |
|
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6334 |
| 281 | 6335 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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6336 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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6337 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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6338 |
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6339 # Against self |
| 281 | 6340 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6341 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 6342 }) ['ID'] | |
|
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6343 self.assertTrue(transaction.startswith('2.25.')) |
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6344 |
|
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6345 result = WaitTransaction(transaction) |
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6346 self.assertEqual('ORTHANC', result['RemoteAET']) |
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6347 self.assertEqual('Success', result['Status']) |
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6348 self.assertEqual(1, len(result['Success'])) |
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6349 self.assertEqual(0, len(result['Failures'])) |
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6350 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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6351 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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6352 |
| 281 | 6353 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6354 "DicomInstances" : [ | |
| 6355 { 'SOPClassUID' : sopClassUid, | |
| 6356 'SOPInstanceUID' : sopInstanceUid }, | |
| 6357 ], | |
| 6358 }) | |
| 6359 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 6360 self.assertEqual(result, WaitTransaction(transaction)) | |
| 6361 | |
| 6362 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 6363 "Resources" : [ | |
| 6364 instance['ID'], | |
| 6365 instance['ParentSeries'], | |
| 6366 instance['ParentStudy'], | |
| 6367 instance['ParentPatient'], | |
| 6368 ] | |
| 6369 }) | |
|
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6370 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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6371 self.assertEqual(result, WaitTransaction(transaction)) |
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6372 |
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6373 |
| 281 | 6374 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6375 "DicomInstances" : [ | |
| 6376 [ 'nope', 'nope2' ], | |
| 6377 [ sopClassUid, sopInstanceUid ], | |
| 6378 ], | |
| 6379 }) ['ID'] | |
|
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6380 self.assertTrue(transaction.startswith('2.25.')) |
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6381 |
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6382 result = WaitTransaction(transaction) |
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6383 self.assertEqual('ORTHANC', result['RemoteAET']) |
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6384 self.assertEqual('Failure', result['Status']) |
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6385 self.assertEqual(1, len(result['Success'])) |
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6386 self.assertEqual(1, len(result['Failures'])) |
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6387 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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6388 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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6389 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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6390 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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6391 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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6392 |
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6393 # Cannot remove items from a failed storage commitment transaction |
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6394 self.assertRaises(Exception, lambda: |
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6395 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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6396 |
|
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6397 |
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6398 # Against Orthanc 0.8.6, that does not support storage commitment |
|
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508
diff
changeset
|
6399 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
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parents:
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diff
changeset
|
6400 self.assertRaises(Exception, lambda: |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
6401 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
6402 "DicomInstances" : [ |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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diff
changeset
|
6403 [ sopClassUid, sopInstanceUid ], |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
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diff
changeset
|
6404 ] |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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diff
changeset
|
6405 })) |
|
279
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diff
changeset
|
6406 |
|
31e1e49df380
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269
diff
changeset
|
6407 |
|
31e1e49df380
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269
diff
changeset
|
6408 |
|
31e1e49df380
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diff
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|
6409 def test_storage_commitment_store(self): |
|
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|
6410 # Storage commitment is available since Orthanc 1.6.0 |
|
280
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diff
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|
6411 |
|
5daa3896981c
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diff
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|
6412 def WaitTransaction(uid): |
|
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diff
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|
6413 while True: |
|
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diff
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|
6414 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
|
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diff
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|
6415 if s['Status'] != 'Pending': |
|
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diff
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|
6416 return s |
|
5daa3896981c
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279
diff
changeset
|
6417 else: |
|
342
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6418 time.sleep(0.01) |
|
280
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diff
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|
6419 |
|
279
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diff
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|
6420 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
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diff
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|
6421 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
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|
6422 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
6423 |
|
31e1e49df380
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diff
changeset
|
6424 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6425 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6426 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6427 'Resources' : [ i ], |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
6428 'StorageCommitment' : True, |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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508
diff
changeset
|
6429 })) |
|
279
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diff
changeset
|
6430 |
|
31e1e49df380
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diff
changeset
|
6431 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
6432 'Resources' : [ i ], |
|
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diff
changeset
|
6433 'StorageCommitment' : False, |
|
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diff
changeset
|
6434 }) |
|
31e1e49df380
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diff
changeset
|
6435 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
6436 |
|
31e1e49df380
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269
diff
changeset
|
6437 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
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diff
changeset
|
6438 'Resources' : [ i ], |
|
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diff
changeset
|
6439 'StorageCommitment' : True, |
|
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diff
changeset
|
6440 }) |
|
31e1e49df380
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269
diff
changeset
|
6441 |
|
31e1e49df380
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diff
changeset
|
6442 transaction = j['StorageCommitmentTransactionUID'] |
|
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diff
changeset
|
6443 self.assertTrue(transaction.startswith('2.25.')) |
|
280
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diff
changeset
|
6444 |
|
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279
diff
changeset
|
6445 result = WaitTransaction(transaction) |
|
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diff
changeset
|
6446 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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diff
changeset
|
6447 self.assertEqual('Success', result['Status']) |
|
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diff
changeset
|
6448 self.assertEqual(1, len(result['Success'])) |
|
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279
diff
changeset
|
6449 self.assertEqual(0, len(result['Failures'])) |
|
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279
diff
changeset
|
6450 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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diff
changeset
|
6451 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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diff
changeset
|
6452 result['Success'][0]['SOPInstanceUID']) |
|
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279
diff
changeset
|
6453 |
|
5daa3896981c
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Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
6454 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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279
diff
changeset
|
6455 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
|
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279
diff
changeset
|
6456 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6457 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6458 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6459 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6460 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6461 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6462 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6463 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6464 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6465 |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6466 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6467 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6468 |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6469 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6470 |
|
281a32ecc5c1
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diff
changeset
|
6471 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
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diff
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|
6472 answer['SOPClassUID']) |
|
281a32ecc5c1
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diff
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|
6473 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
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diff
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|
6474 answer['SOPInstanceUID']) |
|
281a32ecc5c1
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diff
changeset
|
6475 |
|
281a32ecc5c1
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diff
changeset
|
6476 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
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diff
changeset
|
6477 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6478 |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6479 |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6480 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
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|
6481 # Add a RLE-encoded DICOM file |
|
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changeset
|
6482 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
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test_storescu_transcoding
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diff
changeset
|
6483 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
6484 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
6485 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
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diff
changeset
|
6486 |
|
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diff
changeset
|
6487 # Export the instance, with transcoding: "_REMOTE" is the |
|
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changeset
|
6488 # Orthanc server being tested |
|
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|
6489 try: |
|
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diff
changeset
|
6490 DoDelete(_REMOTE, '/modalities/toto') |
|
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|
6491 except: |
|
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diff
changeset
|
6492 pass |
|
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test_storescu_transcoding
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diff
changeset
|
6493 |
|
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diff
changeset
|
6494 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
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changeset
|
6495 DoPut(_REMOTE, '/modalities/toto', params) |
|
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changeset
|
6496 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
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changeset
|
6497 j = DoGet(_LOCAL, '/instances') |
|
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changeset
|
6498 self.assertEqual(1, len(j)) |
|
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diff
changeset
|
6499 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
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changeset
|
6500 self.assertTrue(uncompressedSize > rleSize / 2) |
|
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diff
changeset
|
6501 |
|
509
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Alain Mazy <am@osimis.io>
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diff
changeset
|
6502 # Export, with transcoding disabled => this fails with 0.8.6 but not with more recent versions |
|
289
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diff
changeset
|
6503 params['AllowTranscoding'] = False |
|
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test_storescu_transcoding
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diff
changeset
|
6504 DoPut(_REMOTE, '/modalities/toto', params) |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6505 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6506 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6507 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6508 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
6509 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6510 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6511 |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6512 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6513 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6514 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6515 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6516 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
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test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6517 |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6518 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6519 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6520 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6521 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6522 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6523 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6524 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6525 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6526 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6527 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6528 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6529 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6530 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6531 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6532 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6533 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6534 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6535 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6536 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6537 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6538 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6539 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6540 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6541 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6542 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6543 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6544 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6545 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6546 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6547 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6548 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6549 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6550 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6551 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
6552 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6553 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6554 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6555 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6556 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6557 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6558 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6559 |
| 304 | 6560 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6561 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6562 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6563 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6564 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6565 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6566 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6567 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6568 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6569 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6570 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6571 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6572 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6573 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6574 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6575 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6576 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6577 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6578 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6579 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6580 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6581 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6582 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6583 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6584 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6585 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6586 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6587 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6588 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6589 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6590 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6591 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6592 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6593 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6594 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6595 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6596 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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291
diff
changeset
|
6597 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6598 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6599 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6600 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6601 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6602 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6603 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6604 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6605 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6606 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6607 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6608 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6609 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6610 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6611 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6612 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6613 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6614 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6615 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6616 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6617 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6618 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6619 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6620 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6621 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6622 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6623 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6624 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6625 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6626 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6627 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6628 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6629 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6630 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6631 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6632 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6633 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6634 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6635 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6636 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6637 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6638 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6639 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6640 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6641 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6642 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6643 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6644 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6645 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6646 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6647 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6648 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6649 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6650 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6651 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6652 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6653 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6654 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6655 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6656 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6657 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6658 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6659 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6660 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6661 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6662 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6663 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6664 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6665 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6666 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6667 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6668 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6669 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6670 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6671 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6672 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6673 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6674 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6675 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6676 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6677 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6678 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6679 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6680 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6681 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6682 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6683 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6684 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6685 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6686 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6687 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6688 z = GetArchive(_REMOTE, '/tools/create-archive?resources=%s&transcode=1.2.840.10008.1.2.4.50' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6689 self.assertEqual(1, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6690 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6691 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6692 z = GetArchive(_REMOTE, '/tools/create-media?resources=%s&transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6693 self.assertEqual(2, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6694 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6695 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6696 z = GetArchive(_REMOTE, '/tools/create-media-extended?resources=%s&transcode=1.2.840.10008.1.2.4.57' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6697 self.assertEqual(2, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6698 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6699 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6700 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6701 |
| 308 | 6702 |
| 587 | 6703 def test_download_file_transcode(self): |
| 6704 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 6705 | |
| 6706 info = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.1.dcm') | |
| 6707 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( | |
| 6708 DoGet(_REMOTE, '/instances/%s/file' % info['ID']))) | |
| 6709 | |
| 6710 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( | |
| 6711 DoGet(_REMOTE, '/instances/%s/file?transcode=1.2.840.10008.1.2.4.50' % info['ID']))) | |
| 6712 | |
| 6713 | |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6714 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6715 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6716 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6717 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6718 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6719 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6720 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6721 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6722 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6723 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6724 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6725 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6726 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6727 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6728 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6729 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6730 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6731 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6732 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6733 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6734 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6735 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6736 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6737 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6738 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6739 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6740 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6741 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6742 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6743 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6744 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6745 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6746 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6747 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6748 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6749 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6750 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6751 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6752 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6753 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6754 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6755 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6756 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6757 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6758 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6759 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6760 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6761 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6762 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6763 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6764 |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6765 def test_modify_need_force_to_change_uids(self): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6766 def Modify(level, resourceId, replaceTags, force, keepSource): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6767 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6768 'Replace' : replaceTags, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6769 'Force': force, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6770 'KeepSource' : keepSource |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6771 }) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6772 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6773 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6774 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6775 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6776 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6777 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6778 # can not change the StudyInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6779 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6780 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6781 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6782 # can not change the SeriesInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6783 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6784 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6785 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6786 # can not change the SOPInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6787 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6788 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6789 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6790 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6791 # can not change the PatientID of a study unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6792 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6793 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6794 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6795 |
| 500 | 6796 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6797 # this was forbidden even with Force=true till 1.11.2 included |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6798 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6799 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6800 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6801 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6802 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6803 def test_modify_study_module_reconstruction(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6804 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6805 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6806 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6807 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6808 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6809 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6810 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6811 UploadFolder(_REMOTE, 'Knee/T2') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6812 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6813 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6814 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6815 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6816 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6817 'Replace' : replaceTags, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6818 'Force': force, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6819 'KeepSource' : keepSource |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6820 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6821 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6822 return (modifyResponse, modifiedResource) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6823 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6824 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6825 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6826 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6827 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6828 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6829 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6830 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6831 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6832 ####### study level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6833 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6834 # modify study description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6835 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6836 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6837 'StudyDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6838 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6839 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6840 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6841 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6842 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6843 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6844 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6845 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6846 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6847 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6848 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6849 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6850 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6851 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6852 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6853 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6854 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6855 'PatientID': 'TOTO_ID', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6856 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6857 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6858 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6859 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6860 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6861 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6862 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6863 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6864 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6865 ####### series level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6866 # modify series description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6867 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6868 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6869 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6870 'SeriesDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6871 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6872 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6873 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6874 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6875 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6876 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6877 def test_rename_patient_with_multiple_studies(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6878 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6879 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6880 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6881 patientDicomId = 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6882 patientName = 'Test' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6883 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6884 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6885 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6886 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6887 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6888 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6889 # each sub-test is in a dedicated 'if' for clarity |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6890 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6891 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6892 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6893 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6894 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6895 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6896 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6897 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6898 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6899 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6900 # rename the patient (at patient level) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6901 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6902 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6903 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6904 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6905 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6906 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6907 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6908 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6909 # make sure the patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6910 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6911 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6912 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6913 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6914 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6915 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6916 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6917 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6918 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6919 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6920 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6921 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6922 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6923 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6924 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6925 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6926 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6927 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6928 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6929 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6930 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6931 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6932 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6933 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6934 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6935 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6936 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6937 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6938 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6939 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6940 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6941 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6942 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6943 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6944 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6945 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6946 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6947 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6948 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6949 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6950 # would have the same orthanc ids as the source ids -> they would be deleted |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6951 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6952 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6953 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6954 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6955 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6956 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6957 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6958 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6959 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6960 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6961 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6962 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6963 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6964 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6965 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6966 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6967 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6968 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6969 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6970 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6971 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6972 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6973 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6974 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6975 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6976 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6977 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6978 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6979 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6980 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6981 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6982 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6983 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6984 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6985 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6986 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6987 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6988 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6989 # try to attach the knee study to an existing patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6990 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6991 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6992 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6993 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6994 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6995 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6996 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6997 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6998 # this should fail if only specifying the PatientID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6999 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7000 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7001 'PatientID': 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7002 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7003 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7004 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7005 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7006 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7007 # this should fail if specifying all tags but one of them is not correct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7008 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7009 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7010 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7011 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7012 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7013 'PatientSex': 'F' # this is wrong ! |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7014 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7015 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7016 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7017 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7018 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7019 # this should fail if specifying a tag that is not defined in DB for that patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7020 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7021 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7022 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7023 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7024 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7025 'PatientSex': 'M', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7026 '0010,1000': 'TUTU' # this does not exist in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7027 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7028 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7029 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7030 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7031 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7032 # this should now work with all correct tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7033 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7034 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7035 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7036 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7037 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7038 'PatientSex': 'M' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7039 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7040 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7041 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7042 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7043 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7044 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7045 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7046 # make sure tha patient name remains the same at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7047 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7048 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7049 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7050 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7051 # try to edit patient in Knee (only study from this patient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7052 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7053 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7054 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7055 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7056 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7057 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7058 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7059 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7060 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7061 # try to change the PatientName and StudyDescription at study level. |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7062 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7063 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7064 'PatientName': 'Test Knee', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7065 'StudyDescription': 'Knee study' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7066 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7067 'Keep': ['StudyInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7068 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7069 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7070 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7071 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7072 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7073 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7074 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7075 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7076 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7077 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7078 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7079 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7080 'PatientName': 'Test Knee 2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7081 'PatientID': 'TEST_KNEE_2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7082 'StudyDescription': 'Knee study 2' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7083 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7084 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7085 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7086 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7087 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7088 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7089 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7090 # reload the patient, now, its orthanc id has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7091 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7092 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7093 # the previous patient shall not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7094 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
7095 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7096 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7097 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7098 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7099 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7100 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7101 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7102 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7103 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7104 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7105 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7106 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7107 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7108 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7109 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7110 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7111 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7112 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7113 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7114 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7115 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7116 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7117 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7118 for syntax in SYNTAXES: |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7119 body = { |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7120 'Resources' : [ i ], |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7121 } |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7122 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7123 if syntax != '1.2.840.10008.1.2.1': |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7124 body['Transcode'] = syntax |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7125 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7126 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7127 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7128 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7129 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7130 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7131 self.assertEqual(syntax, GetTransferSyntax( |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7132 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7133 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7134 DropOrthanc(_LOCAL) |
| 308 | 7135 |
| 7136 | |
| 295 | 7137 def test_getscu(self): |
| 307 | 7138 def CleanTarget(): |
| 7139 if os.path.isdir('/tmp/GETSCU'): | |
| 7140 shutil.rmtree('/tmp/GETSCU') | |
| 7141 os.makedirs('/tmp/GETSCU') | |
| 7142 | |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
7143 env = {} |
|
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7144 if _DOCKER: |
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7145 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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7146 # and running in a GNU/Linux distribution running DCMTK |
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7147 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
| 529 | 7148 env['DCMDICTPATH'] = os.environ.get('DCMDICTPATH', '/usr/share/libdcmtk2/dicom.dic') |
|
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7149 |
| 295 | 7150 # no transcoding required |
| 307 | 7151 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 7152 | |
| 7153 CleanTarget() | |
| 295 | 7154 |
|
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7155 subprocess.check_call([ |
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7156 FindExecutable('getscu'), |
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7157 _REMOTE['Server'], |
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7158 str(_REMOTE['DicomPort']), |
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7159 '-aec', 'ORTHANC', |
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7160 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 7161 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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7162 '-k', '0008,0052=STUDY', |
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7163 '--output-directory', '/tmp/GETSCU/' |
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7164 ], env = env) |
| 295 | 7165 |
| 311 | 7166 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 7167 self.assertTrue(os.path.isfile(f1)) | |
| 7168 with open(f1, 'rb') as f: | |
| 543 | 7169 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
| 311 | 7170 |
| 307 | 7171 CleanTarget() |
| 295 | 7172 |
| 7173 # transcoding required | |
| 311 | 7174 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 7175 |
| 7176 subprocess.check_call([ | |
| 7177 FindExecutable('getscu'), | |
| 7178 _REMOTE['Server'], | |
| 7179 str(_REMOTE['DicomPort']), | |
| 7180 '-aec', 'ORTHANC', | |
| 7181 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 7182 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 7183 '-k', '0008,0052=STUDY', |
| 7184 '--output-directory', '/tmp/GETSCU/' | |
| 7185 ], env = env) | |
| 7186 | |
| 311 | 7187 self.assertTrue(os.path.isfile(f1)) |
| 7188 with open(f1, 'rb') as f: | |
| 543 | 7189 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
| 311 | 7190 |
| 7191 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 7192 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 7193 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 7194 self.assertTrue(os.path.isfile(f2)) | |
| 7195 with open(f2, 'rb') as f: | |
| 7196 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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7197 |
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7198 |
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7199 def test_findscu_truncation(self): |
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7200 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
| 585 | 7201 # Fixed by: https://orthanc.uclouvain.be/hg/orthanc/rev/2724977419fb |
|
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7202 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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7203 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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7204 |
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7205 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
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7206 |
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7207 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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7208 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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7209 self.assertEqual(2, len(result)) |
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7210 |
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7211 # The "StudyInstanceUID" is set as a list of 5 times the same |
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7212 # study, leading to a string of 249 characters |
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7213 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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7214 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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7215 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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7216 self.assertEqual(1, len(result)) |
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7217 |
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7218 # The "StudyInstanceUID" is set as a list of 6 times the same |
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7219 # study, leading to a string of 299 characters. In Orthanc <= |
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7220 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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7221 # == 256, and is thus wiped out by C-FIND SCP. As a |
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7222 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
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7223 # "StudyInstanceUID" and returns all the available |
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7224 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
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7225 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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7226 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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7227 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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7228 self.assertEqual(1, len(result)) |
|
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|
7229 |
|
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|
7230 |
|
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|
7231 def test_store_compressed(self): |
|
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7232 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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|
7233 dicom = f.read() |
|
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|
7234 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
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|
7235 sourceSize = len(dicom) |
|
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7236 |
|
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|
7237 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7238 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
7239 |
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7240 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
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|
7241 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
7242 _REMOTE, '/peers/peer/store', { |
|
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|
7243 'Resources' : [ i ], |
|
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7244 'Synchronous' : False, |
|
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|
7245 })) |
|
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|
7246 |
|
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|
7247 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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7248 self.assertFalse(job['Content']['Compress']) |
|
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|
7249 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
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|
7250 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
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|
7251 |
|
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|
7252 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7253 DropOrthanc(_LOCAL) |
|
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7254 |
|
509
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|
7255 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
7256 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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|
7257 # Not supported by Orthanc 0.8.6 => failure |
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|
7258 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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|
7259 'Resources' : [ i ], |
|
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7260 'Compress' : True, |
|
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|
7261 })) |
|
509
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|
7262 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7263 |
|
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|
7264 # Sending to the tested remote server, with compression: OK |
|
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|
7265 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
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|
7266 _REMOTE, '/peers/self/store', { |
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|
7267 'Resources' : [ i ], |
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|
7268 'Compress' : True, |
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|
7269 'Synchronous' : False, |
|
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|
7270 })) |
|
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|
7271 |
|
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|
7272 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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changeset
|
7273 self.assertTrue(job['Content']['Compress']) |
|
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parents:
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diff
changeset
|
7274 |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
508
diff
changeset
|
7275 # Compression must have divided the size of the sent data at least twice |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
7276 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 7277 |
| 7278 | |
| 7279 def test_move_ambra(self): | |
| 7280 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 7281 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 7282 | |
| 7283 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 7284 | |
| 7285 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7286 '--study', | |
| 7287 '-k', 'StudyInstanceUID=' | |
| 7288 ]))) | |
| 7289 | |
| 7290 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7291 '--study', | |
| 7292 '-k', 'AccessionNumber=', | |
| 7293 ]))) | |
| 7294 | |
| 7295 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7296 '--study', | |
| 7297 '-k', 'AccessionNumber=', | |
| 7298 '-k', 'StudyInstanceUID=' | |
| 7299 ]))) | |
| 7300 | |
| 7301 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7302 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7303 '--study', | |
| 7304 '-k', 'AccessionNumber=CT16000988', | |
| 7305 '-k', 'StudyInstanceUID=', | |
| 7306 ]))) | |
| 7307 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7308 DropOrthanc(_LOCAL) | |
| 7309 | |
| 7310 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7311 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7312 '--study', | |
| 7313 '-k', 'AccessionNumber=CT16000988', | |
| 7314 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 7315 ]))) | |
| 7316 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7317 DropOrthanc(_LOCAL) | |
| 7318 | |
| 7319 # This fails on Orthanc <= 1.7.3 | |
| 7320 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7321 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7322 '--study', | |
| 7323 '-k', 'AccessionNumber=', | |
| 7324 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 7325 ]))) | |
| 7326 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7327 DropOrthanc(_LOCAL) | |
|
333
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diff
changeset
|
7328 |
|
695be643b0f4
test_decode_elscint
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parents:
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diff
changeset
|
7329 |
|
695be643b0f4
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diff
changeset
|
7330 def test_decode_elscint(self): |
|
695be643b0f4
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parents:
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diff
changeset
|
7331 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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diff
changeset
|
7332 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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diff
changeset
|
7333 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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diff
changeset
|
7334 |
|
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diff
changeset
|
7335 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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changeset
|
7336 self.assertEqual("L", im.mode) |
|
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|
7337 self.assertEqual(512, im.size[0]) |
|
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changeset
|
7338 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
7339 |
|
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diff
changeset
|
7340 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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diff
changeset
|
7341 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
7342 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
7343 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
7344 |
|
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diff
changeset
|
7345 # The two tests below fail on Orthanc <= 1.7.3 |
|
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diff
changeset
|
7346 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
695be643b0f4
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diff
changeset
|
7347 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
7348 |
|
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parents:
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diff
changeset
|
7349 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
695be643b0f4
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parents:
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diff
changeset
|
7350 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
7351 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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parents:
333
diff
changeset
|
7352 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7353 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7354 # Problem reported by Alain Mazy on 2020-09-15 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7355 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7356 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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parents:
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diff
changeset
|
7357 |
|
335
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7358 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
96718de2f29c
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parents:
334
diff
changeset
|
7359 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
96718de2f29c
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parents:
334
diff
changeset
|
7360 self.assertEqual(1, len(modalitiesInStudy)) |
|
96718de2f29c
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parents:
334
diff
changeset
|
7361 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
96718de2f29c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7362 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7363 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
96718de2f29c
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parents:
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diff
changeset
|
7364 # The empty string '' corresponds to universal matching. |
|
96718de2f29c
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parents:
334
diff
changeset
|
7365 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
96718de2f29c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7366 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7367 if i in [ 'UX', 'UX\\MR' ]: |
|
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7368 expected = 0 |
|
96718de2f29c
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parents:
334
diff
changeset
|
7369 else: |
|
96718de2f29c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7370 expected = 1 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7371 |
|
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7372 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7373 'Query' : { 'ModalitiesInStudy' : i }}) |
|
335
96718de2f29c
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334
diff
changeset
|
7374 self.assertEqual(expected, len(a)) |
|
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7375 |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7376 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7377 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
335
96718de2f29c
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Sebastien Jodogne <s.jodogne@gmail.com>
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334
diff
changeset
|
7378 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7379 |
|
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7380 |
|
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7381 def test_webdav(self): |
|
ec13ace43bde
trying webdav tests
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parents:
335
diff
changeset
|
7382 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
ec13ace43bde
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Sebastien Jodogne <s.jodogne@gmail.com>
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335
diff
changeset
|
7383 |
|
342
bf8369ea3ff1
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parents:
341
diff
changeset
|
7384 for suffix in [ '', '/' ]: |
|
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341
diff
changeset
|
7385 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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diff
changeset
|
7386 self.assertEqual(1, len(f)) |
|
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341
diff
changeset
|
7387 self.assertTrue('/webdav/' in f.keys()) |
|
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341
diff
changeset
|
7388 self.assertTrue(f['/webdav/']['folder']) |
|
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341
diff
changeset
|
7389 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
7390 |
|
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341
diff
changeset
|
7391 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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diff
changeset
|
7392 self.assertEqual(6, len(f)) |
|
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diff
changeset
|
7393 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
7394 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
7395 |
|
bf8369ea3ff1
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341
diff
changeset
|
7396 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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diff
changeset
|
7397 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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diff
changeset
|
7398 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
7399 |
|
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341
diff
changeset
|
7400 for depth in [ 0, 1 ]: |
|
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diff
changeset
|
7401 for suffix2 in [ '', '/' ]: |
|
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diff
changeset
|
7402 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
changeset
|
7403 |
|
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diff
changeset
|
7404 if i == 'uploads': |
|
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diff
changeset
|
7405 # Empty folders might still exist in "/uploads/" |
|
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diff
changeset
|
7406 self.assertTrue('/webdav/uploads/' in g) |
|
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diff
changeset
|
7407 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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diff
changeset
|
7408 for j in g.items(): |
|
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changeset
|
7409 self.assertTrue(g.items()[0][1]['folder']) |
|
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|
7410 else: |
|
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diff
changeset
|
7411 self.assertEqual(1, len(g)) |
|
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diff
changeset
|
7412 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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diff
changeset
|
7413 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
changeset
|
7414 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
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|
7415 |
|
342
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diff
changeset
|
7416 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
7417 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
7418 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
7419 |
|
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
7420 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
bf8369ea3ff1
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parents:
341
diff
changeset
|
7421 time.sleep(0.01) |
|
bf8369ea3ff1
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parents:
341
diff
changeset
|
7422 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7423 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7424 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7425 def test_log_categories(self): |
| 350 | 7426 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7427 |
| 350 | 7428 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 7429 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7430 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
7431 |
| 350 | 7432 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 7433 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7434 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7435 |
| 350 | 7436 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 7437 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7438 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7439 |
| 350 | 7440 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7441 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7442 # Switch back to the original log level |
| 350 | 7443 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 7444 | |
| 7445 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7446 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7447 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7448 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 7449 |
| 7450 | |
| 7451 def test_upload_zip(self): | |
| 7452 f = StringIO() | |
| 7453 with zipfile.ZipFile(f, 'w') as z: | |
| 7454 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 7455 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 7456 c = g.read() | |
| 7457 z.writestr('hello/world/dicom1.dcm', c) | |
| 7458 z.writestr('hello/world/dicom2.dcm', c) | |
| 7459 | |
| 7460 f.seek(0) | |
| 7461 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 7462 | |
| 7463 self.assertEqual(2, len(i)) | |
| 7464 self.assertEqual(i[0], i[1]) | |
| 7465 self.assertEqual(6, len(i[0])) | |
| 7466 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 7467 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 7468 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 7469 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 7470 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 7471 | |
| 7472 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 7473 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7474 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7475 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7476 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7477 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7478 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7479 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7480 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7481 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7482 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7483 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7484 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7485 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7486 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7487 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7488 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7489 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7490 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7491 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7492 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7493 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7494 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7495 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7496 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7497 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7498 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7499 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7500 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7501 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7502 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7503 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7504 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7505 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7506 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7507 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7508 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7509 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7510 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7511 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7512 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7513 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7514 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7515 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7516 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7517 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7518 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7519 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7520 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7521 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7522 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7523 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7524 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7525 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7526 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7527 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7528 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7529 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7530 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7531 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7532 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7533 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7534 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7535 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7536 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7537 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7538 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7539 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7540 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7541 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7542 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7543 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7544 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7545 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7546 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7547 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7548 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7549 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7550 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7551 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7552 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7553 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7554 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7555 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7556 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7557 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7558 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7559 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7560 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7561 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7562 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7563 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7564 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7565 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7566 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7567 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7568 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7569 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7570 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7571 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7572 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7573 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7574 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7575 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7576 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7577 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7578 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7579 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7580 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7581 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7582 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7583 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7584 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7585 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7586 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7587 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7588 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7589 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7590 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7591 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7592 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7593 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7594 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7595 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7596 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7597 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7598 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7599 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7600 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7601 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7602 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7603 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 6): |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7604 self.assertEqual(3, len(peer)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7605 self.assertEqual(5, peer['DatabaseVersion']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7606 self.assertEqual('MyOrthanc', peer['Name']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7607 self.assertEqual('0.8.6', peer['Version']) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7608 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7609 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7610 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7611 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7612 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7613 # "ParentStudy", "ParentSeries" are not reported |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7614 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7615 self.assertEqual(3, len(j)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7616 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7617 self.assertEqual(6, len(j)) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7618 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7619 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7620 self.assertEqual('Success', j['Status']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7621 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7622 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7623 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 7624 |
| 7625 | |
| 7626 def test_cp246(self): | |
| 7627 # This fails on Orthanc <= 1.9.0 | |
| 7628 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 7629 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 7630 | |
| 7631 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 7632 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 7633 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 7634 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 7635 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 7636 | |
| 7637 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 7638 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 7639 | |
| 7640 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 7641 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 7642 | |
| 7643 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 7644 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 7645 | |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7646 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
7647 def test_revisions_metadata(self): |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7648 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7649 # was introduced in 1.9.2), or if configuration option |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7650 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7651 # related to revisions mimic CouchDB: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7652 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7653 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7654 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7655 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7656 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7657 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7658 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7659 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7660 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7661 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7662 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7663 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7664 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7665 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7666 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7667 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7668 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7669 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7670 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7671 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7672 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7673 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7674 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7675 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7676 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7677 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7678 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7679 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7680 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7681 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7682 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7683 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7684 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7685 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7686 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7687 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7688 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7689 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7690 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7691 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7692 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7693 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7694 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7695 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7696 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7697 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7698 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7699 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7700 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7701 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7702 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7703 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7704 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7705 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7706 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7707 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7708 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7709 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7710 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7711 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7712 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7713 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7714 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7715 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7716 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7717 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7718 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7719 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7720 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7721 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7722 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7723 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7724 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7725 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7726 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7727 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7728 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7729 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7730 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7731 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7732 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7733 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7734 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7735 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7736 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7737 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7738 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7739 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7740 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7741 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7742 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7743 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7744 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7745 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7746 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7747 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7748 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7749 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7750 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7751 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7752 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7753 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7754 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7755 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7756 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7757 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7758 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7759 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7760 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7761 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7762 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7763 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7764 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7765 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7766 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7767 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7768 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7769 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7770 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7771 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7772 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7773 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7774 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7775 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7776 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7777 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7778 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7779 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7780 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7781 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7782 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7783 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7784 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7785 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7786 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7787 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7788 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7789 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7790 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7791 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7792 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7793 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7794 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7795 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7796 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7797 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7798 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7799 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7800 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7801 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7802 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7803 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7804 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7805 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7806 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7807 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7808 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7809 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7810 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7811 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7812 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7813 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7814 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7815 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7816 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7817 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7818 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7819 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7820 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7821 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7822 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7823 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7824 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7825 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7826 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7827 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7828 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7829 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7830 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7831 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7832 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7833 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7834 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7835 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7836 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7837 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7838 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7839 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7840 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7841 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7842 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7843 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7844 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7845 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7846 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7847 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7848 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7849 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7850 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7851 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7852 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7853 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7854 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7855 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7856 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7857 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7858 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7859 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7860 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7861 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7862 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7863 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7864 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7865 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7866 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7867 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7868 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7869 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7870 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7871 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7872 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7873 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7874 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7875 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7876 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7877 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7878 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7879 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7880 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7881 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7882 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7883 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7884 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7885 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7886 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7887 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7888 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7889 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7890 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7891 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7892 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7893 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7894 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7895 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7896 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7897 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7898 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7899 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7900 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7901 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7902 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7903 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7904 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7905 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7906 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7907 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7908 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7909 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7910 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7911 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7912 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7913 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7914 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7915 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7916 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7917 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7918 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7919 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7920 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7921 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7922 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7923 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7924 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7925 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7926 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7927 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7928 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7929 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7930 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7931 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7932 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7933 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7934 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7935 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7936 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7937 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7938 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7939 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7940 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7941 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7942 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7943 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7944 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7945 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7946 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7947 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7948 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7949 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7950 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7951 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7952 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7953 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7954 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7955 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7956 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7957 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7958 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7959 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7960 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7961 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7962 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7963 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7964 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7965 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7966 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7967 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7968 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7969 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7970 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7971 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7972 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7973 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7974 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7975 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7976 # This fails on Orthanc <= 1.9.2 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
7977 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7978 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7979 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7980 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7981 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7982 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7983 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7984 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7985 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7986 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7987 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7988 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7989 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7990 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7991 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7992 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7993 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7994 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7995 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7996 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7997 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7998 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7999 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8000 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8001 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8002 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8003 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8004 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8005 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8006 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8007 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8008 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8009 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8010 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8011 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8012 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8013 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8014 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8015 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8016 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8017 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8018 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8019 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8020 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8021 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8022 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8023 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8024 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8025 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8026 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8027 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8028 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8029 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8030 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8031 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8032 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8033 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8034 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8035 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8036 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8037 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8038 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8039 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8040 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8041 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8042 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8043 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8044 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8045 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8046 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8047 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8048 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8049 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8050 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8051 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8052 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8053 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8054 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8055 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8056 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8057 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 8058 |
| 8059 | |
| 8060 def test_issue_146(self): | |
| 8061 # "Update Anonyization to 2019c" | |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
8062 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 |
| 405 | 8063 |
| 8064 def GetTags(study, params): | |
| 8065 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 8066 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 8067 self.assertEqual(1, len(b)) | |
| 8068 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 8069 | |
| 8070 | |
| 8071 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 8072 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 8073 | |
| 8074 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 8075 | |
| 8076 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 8077 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 8078 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8079 tags2023b = GetTags(study, { 'DicomVersion' : '2023b' }) |
| 405 | 8080 tagsDefault = GetTags(study, {}) |
| 8081 | |
| 420 | 8082 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 8083 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 8084 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 8085 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8086 self.assertEqual('Orthanc %s - PS 3.15-2023b Table E.1-1 Basic Profile' % orthancVersion, tags2023b['0012,0063']) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8087 self.assertEqual(tagsDefault['0012,0063'], tags2023b['0012,0063']) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8088 |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8089 self.assertEqual(len(tags2021b), len(tags2023b)) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8090 self.assertNotEqual(tags2021b, tags2023b) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8091 |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8092 for t in [ tags2008, tags2017c, tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8093 self.assertTrue(t['0010,0010'].startswith('Anonymized')) |
| 8094 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 8095 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 8096 self.assertEqual('YES', t['0012,0062']) | |
| 8097 | |
| 8098 for t in [ tags2008 ]: | |
| 8099 self.assertEqual('20200101', t['0008,0020']) | |
| 8100 | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8101 for t in [ tags2017c, tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8102 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c |
| 8103 | |
| 8104 for t in [ tags2008, tags2017c ]: | |
| 8105 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 8106 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 8107 | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8108 for t in [ tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8109 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c |
| 8110 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8111 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8112 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8113 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8114 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8115 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8116 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8117 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8118 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8119 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8120 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8121 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8122 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8123 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8124 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8125 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8126 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8127 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8128 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8129 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8130 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8131 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8132 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8133 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8134 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8135 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8136 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8137 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8138 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8139 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8140 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8141 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8142 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8143 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8144 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8145 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8146 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8147 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8148 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8149 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8150 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8151 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8152 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8153 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8154 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8155 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8156 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8157 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8158 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8159 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8160 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8161 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8162 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8163 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8164 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8165 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8166 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8167 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8168 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8169 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8170 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8171 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8172 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8173 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8174 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8175 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8176 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8177 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8178 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8179 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8180 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8181 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8182 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8183 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8184 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8185 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8186 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8187 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8188 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8189 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8190 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8191 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8192 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8193 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8194 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8195 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8196 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8197 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8198 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8199 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8200 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8201 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8202 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8203 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8204 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8205 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8206 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8207 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8208 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8209 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8210 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8211 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8212 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8213 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8214 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8215 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8216 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8217 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8218 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8219 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8220 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8221 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8222 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8223 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8224 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8225 ], |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8226 'DicomVersion' : '2021b', |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8227 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8228 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8229 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8230 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8231 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8232 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8233 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8234 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8235 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8236 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8237 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8238 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8239 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8240 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8241 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8242 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8243 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8244 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8245 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8246 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8247 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8248 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8249 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8250 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8251 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8252 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8253 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8254 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8255 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8256 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8257 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8258 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8259 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8260 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8261 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8262 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8263 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8264 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8265 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8266 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8267 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8268 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8269 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8270 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8271 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8272 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8273 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8274 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8275 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8276 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8277 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8278 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8279 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8280 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8281 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8282 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8283 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8284 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8285 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8286 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8287 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8288 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8289 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8290 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8291 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8292 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8293 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8294 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8295 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 8296 |
| 8297 | |
| 8298 def test_bulk_modify(self): | |
| 8299 # New in Orthanc 1.9.4 | |
| 8300 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8301 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8302 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 8303 if expectedCount != None: |
| 8304 self.assertEqual(expectedCount, len(m)) | |
| 8305 return m | |
| 8306 | |
| 8307 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 8308 series = DoGet(_REMOTE, '/series') [0] | |
| 8309 study = DoGet(_REMOTE, '/studies') [0] | |
| 8310 patient = DoGet(_REMOTE, '/patients') [0] | |
| 8311 | |
| 8312 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 8313 'Resources' : [ instance ] | |
| 8314 }) | |
| 8315 | |
| 8316 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 8317 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 8318 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 8319 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 8320 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8321 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 8322 'Resources' : [ instance ] |
| 8323 }) | |
| 8324 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8325 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8326 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8327 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8328 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 8329 |
| 8330 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 8331 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 8332 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 8333 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8334 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8335 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8336 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8337 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8338 |
| 410 | 8339 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 8340 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8341 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8342 | |
| 8343 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 8344 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 8345 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 8346 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 8347 | |
| 8348 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 8349 'Resources' : [ knee1, brainix ] | |
| 8350 }) | |
| 8351 | |
| 8352 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 8353 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 8354 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 8355 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 8356 | |
| 8357 for i in GetModified(a, 'Instance', 2): | |
| 8358 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 8359 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 8360 | |
| 8361 b = GetModified(a, 'Series', 2) | |
| 8362 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 8363 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 8364 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 8365 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 8366 | |
| 8367 b = GetModified(a, 'Study', 2) | |
| 8368 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 8369 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 8370 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 8371 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 8372 | |
| 8373 b = GetModified(a, 'Patient', 2) | |
| 8374 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 8375 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 8376 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 8377 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 8378 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8379 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8380 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8381 }) |
| 410 | 8382 |
| 8383 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 8384 sourceSeries = DoGet(_REMOTE, '/series') | |
| 8385 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 8386 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 8387 self.assertEqual(4, len(sourceInstances)) | |
| 8388 self.assertEqual(4, len(sourceSeries)) | |
| 8389 self.assertEqual(3, len(sourceStudies)) | |
| 8390 self.assertEqual(3, len(sourcePatients)) | |
| 8391 | |
| 8392 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 8393 'Resources' : [ knee1, brainix ] | |
| 8394 }) | |
| 8395 | |
| 8396 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 8397 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 8398 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 8399 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 8400 | |
| 8401 for i in GetModified(a, 'Instance', 2): | |
| 8402 self.assertFalse(i in sourceInstances) | |
| 8403 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 8404 | |
| 8405 for i in GetModified(a, 'Series', 2): | |
| 8406 self.assertFalse(i in sourceSeries) | |
| 8407 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 8408 | |
| 8409 for i in GetModified(a, 'Study', 2): | |
| 8410 self.assertFalse(i in sourceStudies) | |
| 8411 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 8412 | |
| 8413 for i in GetModified(a, 'Patient', 2): | |
| 8414 self.assertFalse(i in sourcePatients) | |
| 8415 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8416 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8417 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8418 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8419 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8420 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8421 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8422 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8423 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8424 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8425 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8426 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8427 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8428 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8429 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8430 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8431 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8432 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8433 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8434 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8435 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8436 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8437 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8438 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8439 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8440 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8441 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8442 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8443 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8444 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8445 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8446 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8447 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8448 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8449 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8450 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8451 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8452 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
8453 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8454 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8455 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8456 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8457 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8458 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8459 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8460 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8461 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8462 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8463 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8464 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8465 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8466 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8467 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8468 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8469 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8470 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8471 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8472 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8473 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8474 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8475 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8476 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8477 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8478 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8479 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8480 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8481 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8482 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8483 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8484 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8485 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8486 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8487 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8488 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8489 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8490 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8491 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8492 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8493 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8494 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8495 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8496 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8497 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8498 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8499 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8500 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8501 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8502 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8503 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8504 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8505 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8506 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8507 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8508 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8509 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8510 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8511 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8512 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8513 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8514 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8515 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8516 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8517 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8518 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8519 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8520 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8521 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8522 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8523 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8524 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8525 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8526 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8527 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8528 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8529 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8530 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8531 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8532 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8533 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8534 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8535 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8536 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8537 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8538 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8539 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8540 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8541 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8542 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8543 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8544 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8545 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8546 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8547 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8548 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8549 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8550 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8551 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8552 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8553 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8554 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8555 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8556 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8557 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8558 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8559 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8560 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8561 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8562 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8563 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8564 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8565 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8566 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8567 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8568 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8569 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8570 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8571 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8572 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8573 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8574 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8575 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8576 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8577 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8578 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8579 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8580 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8581 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8582 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8583 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8584 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8585 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8586 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8587 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8588 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8589 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8590 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8591 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8592 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8593 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8594 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8595 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8596 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8597 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8598 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8599 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8600 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8601 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8602 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8603 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8604 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8605 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8606 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8607 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8608 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8609 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8610 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8611 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8612 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8613 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8614 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8615 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8616 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8617 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8618 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8619 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8620 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8621 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8622 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8623 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8624 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8625 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8626 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8627 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8628 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8629 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8630 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8631 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8632 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8633 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8634 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8635 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8636 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8637 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8638 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8639 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8640 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8641 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8642 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8643 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 8644 |
| 8645 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 8646 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 8647 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 8648 | |
| 8649 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 8650 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 8651 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 8652 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 8653 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 8654 | |
| 8655 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 8656 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 8657 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 8658 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 8659 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 8660 | |
| 8661 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 8662 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 8663 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 8664 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 8665 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 8666 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8667 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8668 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8669 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8670 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8671 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8672 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8673 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8674 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8675 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8676 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8677 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8678 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8679 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8680 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8681 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8682 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8683 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8684 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8685 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8686 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8687 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8688 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8689 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8690 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8691 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8692 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8693 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8694 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8695 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8696 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8697 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8698 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8699 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8700 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8701 |
| 415 | 8702 |
| 8703 def test_bulk_content(self): | |
| 8704 # New in Orthanc 1.9.4 | |
| 8705 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 8706 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8707 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8708 | |
| 8709 brainixHierarchy = [ | |
| 8710 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 8711 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 8712 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 8713 brainix, | |
| 8714 ] | |
| 8715 | |
| 8716 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 8717 self.assertEqual(4, len(a)) | |
| 8718 b = map(lambda x: x['ID'], a) | |
| 8719 for i in range(4): | |
| 8720 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8721 self.assertTrue('Metadata' in a[i]) |
| 415 | 8722 |
| 8723 for (level, index) in [ | |
| 8724 ('Patient', 0), | |
| 8725 ('Study', 1), | |
| 8726 ('Series', 2), | |
| 8727 ('Instance', 3), | |
| 8728 ]: | |
| 8729 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 8730 'Level' : level }) | |
| 8731 self.assertEqual(1, len(a)) | |
| 8732 self.assertEqual(level, a[0]['Type']) | |
| 8733 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8734 self.assertTrue('Metadata' in a[0]) |
| 415 | 8735 |
| 8736 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8737 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8738 'Metadata' : False }) |
| 415 | 8739 self.assertEqual(1, len(a)) |
| 8740 self.assertEqual(level, a[0]['Type']) | |
| 8741 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8742 self.assertFalse('Metadata' in a[0]) |
| 415 | 8743 |
| 8744 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 8745 self.assertEqual(3, len(a)) | |
| 8746 for item in a: | |
| 8747 self.assertEqual('Instance', item['Type']) | |
| 8748 b = map(lambda x: x['ID'], a) | |
| 8749 self.assertTrue(knee1 in b) | |
| 8750 self.assertTrue(knee2 in b) | |
| 8751 self.assertTrue(brainix in b) | |
| 8752 | |
| 8753 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 8754 'Level' : 'Series' }) | |
| 8755 self.assertEqual(2, len(a)) | |
| 8756 for item in a: | |
| 8757 self.assertEqual('Series', item['Type']) | |
| 8758 b = map(lambda x: x['ID'], a) | |
| 8759 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 8760 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 8761 | |
| 8762 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8763 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8764 'Metadata' : False }) |
| 415 | 8765 self.assertEqual(1, len(a)) |
| 8766 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 8767 self.assertEqual('Study', a[0]['Type']) | |
| 8768 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8769 self.assertFalse('Metadata' in a[0]) |
| 415 | 8770 |
| 8771 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8772 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8773 'Metadata' : True }) |
| 415 | 8774 self.assertEqual(1, len(a)) |
| 8775 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 8776 self.assertEqual('Patient', a[0]['Type']) | |
| 8777 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8778 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8779 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8780 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8781 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8782 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8783 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8784 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 8785 |
| 8786 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 8787 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 8788 'Level' : level }) | |
| 8789 self.assertEqual(2, len(a)) | |
| 8790 for item in a: | |
| 8791 self.assertEqual(level, item['Type']) | |
| 8792 b = map(lambda x: x['ID'], a) | |
| 8793 if level == 'Instance': | |
| 8794 self.assertTrue(knee1 in b) | |
| 8795 self.assertTrue(brainix in b) | |
| 8796 else: | |
| 8797 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 8798 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8799 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8800 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8801 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8802 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8803 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8804 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8805 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8806 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8807 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8808 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8809 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8810 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8811 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8812 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8813 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8814 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8815 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8816 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8817 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8818 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8819 |
| 417 | 8820 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 8821 'KeepSource' : False | |
| 8822 })) # Neither "Instances", nor "Series" | |
| 8823 | |
| 8824 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8825 'KeepSource' : False, | |
| 8826 'Instances' : [ ], | |
| 8827 'Series' : [ ] | |
| 8828 })) # Empty "Instances" and "Series" | |
| 8829 | |
| 8830 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8831 'Instances' : [ 'nope' ], | |
| 8832 'KeepSource' : False | |
| 8833 })) | |
| 8834 | |
| 8835 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8836 'Series' : [ 'nope' ], | |
| 8837 'KeepSource' : False | |
| 8838 })) | |
| 8839 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8840 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8841 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8842 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8843 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8844 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8845 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8846 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8847 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8848 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8849 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8850 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8851 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8852 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8853 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8854 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8855 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8856 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8857 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8858 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8859 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8860 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8861 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8862 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8863 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8864 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8865 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8866 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8867 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8868 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8869 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8870 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8871 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8872 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8873 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8874 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8875 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8876 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8877 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8878 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8879 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8880 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8881 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8882 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8883 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8884 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8885 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8886 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8887 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8888 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8889 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8890 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8891 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8892 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8893 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8894 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8895 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8896 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8897 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8898 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8899 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8900 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8901 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8902 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8903 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8904 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8905 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8906 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8907 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8908 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8909 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8910 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8911 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8912 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8913 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8914 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8915 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8916 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8917 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8918 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8919 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8920 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8921 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8922 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8923 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8924 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8925 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8926 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8927 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8928 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8929 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8930 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8931 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8932 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8933 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8934 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8935 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8936 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8937 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8938 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8939 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8940 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8941 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8942 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8943 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8944 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8945 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8946 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8947 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8948 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8949 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8950 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8951 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8952 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8953 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8954 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8955 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8956 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8957 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8958 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8959 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8960 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8961 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8962 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8963 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8964 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8965 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8966 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8967 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8968 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8969 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8970 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8971 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8972 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8973 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8974 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8975 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8976 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8977 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8978 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8979 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8980 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8981 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8982 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8983 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8984 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8985 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8986 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8987 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8988 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8989 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8990 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8991 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8992 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8993 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8994 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8995 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8996 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8997 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8998 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8999 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9000 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9001 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9002 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9003 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9004 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9005 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9006 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9007 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9008 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9009 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9010 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9011 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9012 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9013 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9014 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9015 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9016 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9017 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9018 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9019 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9020 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9021 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9022 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9023 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9024 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9025 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9026 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9027 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9028 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9029 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9030 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9031 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9032 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9033 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9034 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9035 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9036 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9037 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9038 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9039 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9040 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9041 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9042 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9043 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9044 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9045 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9046 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9047 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9048 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9049 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9050 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9051 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9052 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9053 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9054 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9055 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9056 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9057 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9058 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9059 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
9060 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 9061 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 9062 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 9063 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9064 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9065 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9066 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9067 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 9068 |
| 9069 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 9070 self.assertEqual(1, len(last)) | |
| 9071 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 9072 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 9073 |
| 9074 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 9075 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 9076 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 9077 | |
| 9078 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 9079 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 9080 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 9081 | |
| 9082 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 9083 self.assertEqual(1, len(last)) | |
| 9084 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 9085 self.assertEqual('self', last[0]['RemoteModality']) | |
| 9086 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 9087 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 9088 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 9089 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 9090 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 9091 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 9092 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9093 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9094 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9095 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9096 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9097 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9098 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9099 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9100 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9101 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9102 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9103 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9104 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9105 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9106 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9107 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9108 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9109 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9110 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9111 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9112 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9113 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9114 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9115 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9116 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9117 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9118 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9119 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9120 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9121 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9122 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9123 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9124 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9125 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9126 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9127 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9128 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9129 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9130 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9131 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9132 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9133 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9134 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9135 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9136 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9137 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9138 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9139 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9140 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9141 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9142 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9143 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9144 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9145 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9146 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9147 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9148 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9149 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9150 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9151 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9152 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9153 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9154 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9155 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9156 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9157 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9158 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9159 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9160 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9161 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9162 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9163 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9164 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9165 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9166 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9167 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9168 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9169 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9170 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9171 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9172 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9173 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9174 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9175 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9176 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9177 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9178 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9179 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9180 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9181 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9182 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9183 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9184 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9185 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9186 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9187 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9188 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9189 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9190 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9191 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9192 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9193 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9194 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9195 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9196 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9197 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9198 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9199 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9200 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9201 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9202 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9203 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9204 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9205 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9206 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9207 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9208 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9209 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9210 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9211 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9212 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9213 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9214 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9215 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9216 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9217 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9218 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9219 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9220 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9221 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9222 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9223 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9224 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9225 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9226 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9227 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9228 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9229 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9230 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9231 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9232 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9233 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9234 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9235 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9236 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9237 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9238 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9239 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9240 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9241 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9242 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9243 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9244 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9245 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9246 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9247 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9248 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9249 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9250 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
9251 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
9252 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
9253 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9254 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9255 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9256 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9257 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9258 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9259 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9260 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9261 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9262 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9263 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9264 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9265 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9266 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9267 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9268 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9269 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9270 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9271 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9272 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9273 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9274 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9275 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9276 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9277 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9278 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9279 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9280 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 9281 |
| 9282 | |
| 9283 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
9284 # New in Orthanc 1.10.0 |
| 440 | 9285 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 9286 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 9287 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9288 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 9289 |
| 9290 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 9291 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9292 self.assertEqual(numpy.float32, c.dtype) | |
| 9293 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9294 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9295 self.assertAlmostEqual(536, c.max()) |
| 440 | 9296 |
| 9297 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 9298 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9299 self.assertEqual(numpy.uint16, c.dtype) | |
| 9300 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9301 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9302 self.assertEqual(536, c.max()) |
| 440 | 9303 |
| 9304 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 9305 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9306 self.assertEqual(numpy.float32, c.dtype) | |
| 9307 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 9308 | |
| 9309 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 9310 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 9311 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9312 self.assertEqual(numpy.float32, c.dtype) | |
| 9313 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 9314 | |
| 9315 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 9316 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 9317 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9318 self.assertEqual(numpy.float32, c.dtype) | |
| 9319 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 9320 | |
| 9321 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 9322 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9323 self.assertEqual(1, len(c.files)) | |
| 9324 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 9325 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 9326 | |
| 9327 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 9328 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9329 self.assertEqual(numpy.float32, c.dtype) | |
| 9330 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9331 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9332 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9333 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9334 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9335 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9336 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9337 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9338 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9339 self.assertAlmostEqual(255, c.max()) |
| 440 | 9340 |
| 9341 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 9342 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9343 self.assertEqual(numpy.float32, c.dtype) | |
| 9344 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 9345 | |
| 9346 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 9347 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 9348 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9349 self.assertEqual(numpy.float32, c.dtype) | |
| 9350 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9351 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9352 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9353 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9354 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9355 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9356 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9357 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9358 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9359 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9360 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9361 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9362 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9363 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9364 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9365 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9366 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9367 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9368 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9369 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9370 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9371 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9372 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9373 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9374 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9375 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9376 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9377 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9378 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9379 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9380 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9381 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9382 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9383 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9384 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9385 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9386 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9387 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9388 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9389 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9390 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9391 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9392 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9393 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9394 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9395 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9396 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9397 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9398 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9399 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9400 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9401 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9402 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9403 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9404 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9405 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9406 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9407 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9408 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9409 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9410 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9411 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9412 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9413 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9414 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9415 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9416 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9417 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9418 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9419 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9420 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9421 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9422 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9423 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9424 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9425 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9426 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9427 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9428 def test_rest_find_requested_tags(self): |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9429 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
| 471 | 9430 |
| 9431 # Upload instances | |
| 9432 for i in range(2): | |
| 9433 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9434 | |
| 9435 # Patient level | |
| 9436 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9437 'CaseSensitive' : False, | |
| 9438 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9439 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
| 471 | 9440 'Expand': True |
| 9441 }) | |
| 9442 self.assertEqual(1, len(a)) | |
| 9443 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9444 self.assertIn('PatientID', a[0]['RequestedTags']) | |
| 9445 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
| 9446 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
| 9447 | |
| 9448 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9449 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
| 9450 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
| 9451 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
| 9452 | |
| 9453 # Study level, request patient tags too | |
| 9454 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9455 'CaseSensitive' : False, | |
| 9456 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9457 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
| 9458 'Expand': True | |
| 9459 }) | |
| 9460 self.assertEqual(1, len(a)) | |
| 9461 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9462 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9463 | |
| 9464 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9465 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9466 | |
| 9467 | |
| 9468 # Series level, request patient and study tags too | |
| 9469 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9470 'CaseSensitive' : False, | |
| 9471 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9472 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
| 471 | 9473 'Expand': True |
| 9474 }) | |
| 9475 self.assertEqual(1, len(a)) | |
| 9476 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9477 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9478 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9479 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9480 |
| 9481 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9482 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9483 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9484 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
| 471 | 9485 |
| 9486 | |
| 9487 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
| 9488 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9489 'CaseSensitive' : False, | |
| 9490 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9491 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
| 471 | 9492 'Expand': True |
| 9493 }) | |
| 9494 self.assertEqual(1, len(a)) | |
| 9495 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9496 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9497 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
| 9498 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9499 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9500 |
| 9501 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9502 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9503 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9504 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9505 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9506 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9507 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9508 def test_rest_find_requested_tags_computed_tags(self): |
| 471 | 9509 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9510 # Upload instances | |
| 9511 for i in range(2): | |
| 9512 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9513 | |
| 9514 | |
| 9515 # Patient level | |
| 9516 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9517 'CaseSensitive' : False, | |
| 9518 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9519 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
| 9520 'Expand': True | |
| 9521 }) | |
| 9522 self.assertEqual(1, len(a)) | |
| 9523 | |
| 9524 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9525 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
| 9526 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
| 9527 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
| 9528 | |
| 9529 # Study level | |
| 9530 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9531 'CaseSensitive' : False, | |
| 9532 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9533 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
| 9534 'Expand': True | |
| 9535 }) | |
| 9536 self.assertEqual(1, len(a)) | |
| 9537 | |
| 9538 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9539 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9540 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9541 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9542 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9543 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
| 9544 | |
| 9545 # Series level | |
| 9546 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9547 'CaseSensitive' : False, | |
| 9548 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9549 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
| 9550 'Expand': True | |
| 9551 }) | |
| 9552 self.assertEqual(1, len(a)) | |
| 9553 | |
| 9554 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9555 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9556 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
| 9557 | |
| 9558 # Instance level | |
| 9559 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 9560 'CaseSensitive' : False, | |
| 9561 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9562 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 9563 'Expand': True | |
| 9564 }) | |
| 9565 self.assertEqual(2, len(a)) | |
| 9566 | |
| 9567 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9568 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9569 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 456 | 9570 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9571 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9572 |
| 471 | 9573 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9574 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9575 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9576 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9577 | |
| 9578 # list series and request tags that are not in the default main dicom tags | |
| 9579 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
| 9580 | |
| 9581 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
| 9582 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
| 9583 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9584 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9585 | |
| 9586 # list studies and request patient and studies tags | |
| 9587 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
| 9588 | |
| 9589 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9590 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9591 | |
| 9592 | |
| 9593 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
| 9594 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
| 9595 | |
| 9596 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9597 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9598 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
| 9599 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9600 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
| 9601 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
| 9602 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9603 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9604 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9605 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9606 |
| 471 | 9607 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9608 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9609 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9610 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9611 | |
| 9612 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9613 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
| 9614 | |
| 9615 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9616 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9617 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9618 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9619 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9620 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9621 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9622 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9623 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9624 |
| 471 | 9625 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9626 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9627 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9628 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9629 | |
| 9630 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9631 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
| 9632 | |
| 9633 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9634 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9635 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9636 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9637 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9638 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 9639 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9640 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9641 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9642 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9643 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9644 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9645 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9646 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
|
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9647 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9648 def test_create_png16RBGA(self): |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9649 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9650 png = f.read() |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9651 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9652 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9653 json.dumps({ |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9654 'PatientName' : 'Jodogne', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9655 'Modality' : 'CT', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9656 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9657 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9658 })) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9659 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9660 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9661 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9662 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9663 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9664 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9665 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9666 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9667 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9668 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9669 j = DoGet(_REMOTE, i['Path']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9670 self.assertEqual('Instance', j['Type']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9671 self.assertEqual(j['ID'], i['ID']) |
|
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9672 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9673 def test_storescu_custom_host_ip_port(self): |
| 510 | 9674 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
| 9675 DropOrthanc(_LOCAL) | |
| 9676 DropOrthanc(_REMOTE) | |
| 9677 | |
| 9678 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 9679 | |
| 9680 # upload to self -> orthanctest shall not receive any content | |
| 9681 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9682 'Resources' : [ a['ID']] | |
| 9683 }) | |
| 9684 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 9685 | |
| 9686 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content | |
| 9687 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') | |
| 9688 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9689 'LocalAet' : 'YOP', | |
| 9690 'CalledAet' : c['AET'], | |
| 9691 'Port' : c['Port'], | |
| 9692 'Host' : c['Host'], | |
| 9693 'Resources' : [ a['ID']] | |
| 9694 }) | |
| 9695 | |
| 9696 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 9697 | |
| 9698 DropOrthanc(_REMOTE) | |
| 9699 DropOrthanc(_LOCAL) | |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9700 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9701 def test_rle_planar_configuration(self): |
| 531 | 9702 if IsOrthancVersionAbove(_REMOTE, 1, 11, 2): |
| 9703 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ | |
| 9704 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
| 9705 uri = '/instances/%s/preview' % a | |
| 9706 im = GetImage(_REMOTE, uri) | |
| 9707 self.assertEqual('RGB', im.mode) | |
| 9708 self.assertEqual(1475, im.size[0]) | |
| 9709 self.assertEqual(1475, im.size[1]) | |
| 9710 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) | |
| 9711 | |
| 9712 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): | |
| 9713 a = UploadInstance(_REMOTE, '2023-04-21-RLEPlanarConfigurationYBR_FULL.dcm') ['ID'] | |
| 9714 uri = '/instances/%s/preview' % a | |
| 9715 im = GetImage(_REMOTE, uri) | |
| 9716 self.assertEqual('RGB', im.mode) | |
| 9717 self.assertEqual(1260, im.size[0]) | |
| 9718 self.assertEqual(910, im.size[1]) | |
| 9719 self.assertEqual('07a3ea7ea08d54362f744cc5945e8743', ComputeMD5(DoGet(_REMOTE, uri))) | |
| 9720 | |
| 512 | 9721 |
| 9722 def test_rest_api_write_to_file_system(self): | |
| 9723 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 9724 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
| 9725 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances/%s/export' % a, '/tmp/test.dcm')) | |
| 513 | 9726 |
|
515
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9727 def test_overwrite_generates_stable_study(self): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9728 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9729 # This test makes sure there are no regression wrt StableStudy when uploading instances in Orthanc |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9730 # The current behaviour (tested from 1.5.7 to 1.12.0) is |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9731 # If you upload 2 instances with a delay > StableAge, you get 2 StableStudy events and they are both listed in /changes |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9732 # If you upload twice the same instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9733 # If you upload an instance and a modified version of this instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9734 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9735 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9736 def GetAllStableStudyChangesIds(studyId, timeout): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9737 # try to be as fast as possible -> stop as soon as we've found a StableStudy event that appeared after we started monitoring |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9738 fromSeq = DoGet(_REMOTE, '/changes')["Last"] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9739 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9740 endTime = time.time() + timeout |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9741 newStableStudyFound = False |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9742 while not newStableStudyFound and time.time() < endTime: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9743 time.sleep(0.1) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9744 changes = DoGet(_REMOTE, '/changes') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9745 stableStudyChangesIds = [] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9746 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9747 for change in changes["Changes"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9748 if change["ChangeType"] == "StableStudy" and studyId == change["ID"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9749 stableStudyChangesIds.append(change["Seq"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9750 if change["Seq"] > fromSeq: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9751 newStableStudyFound = True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9752 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9753 return stableStudyChangesIds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9754 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9755 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9756 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9757 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9758 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9759 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9760 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9761 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9762 # upload the same instance again and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9763 upload1b = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9764 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9765 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9766 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9767 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9768 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9769 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9770 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9771 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9772 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9773 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9774 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9775 # reupload a modified instance in the same study and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9776 modified = DoPost(_REMOTE, '/instances/%s/modify' % upload1["ID"], |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9777 json.dumps({ |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9778 "Replace" : { |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9779 "InstitutionName" : "hello", |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9780 "SOPInstanceUID": "1.2.840.113619.2.176.2025.1499492.7040.1171286241.705" |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9781 }, |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9782 "Force": True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9783 }), |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9784 'application/json') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9785 upload1b = DoPost(_REMOTE, '/instances', modified, 'application/dicom') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9786 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9787 self.assertEqual(upload1["ParentStudy"], upload1b["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9788 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9789 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9790 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9791 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9792 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9793 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9794 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9795 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9796 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9797 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9798 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9799 # upload a new instance in the same study and check a second StableStudy change has been generated with a new id |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9800 upload2 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9801 changes2 = GetAllStableStudyChangesIds(upload2["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9802 self.assertEqual(upload1["ParentStudy"], upload2["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9803 self.assertEqual(2, len(changes2)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9804 self.assertEqual(changes1[0], changes2[0]) |
| 516 | 9805 |
| 513 | 9806 def test_labels(self): |
| 523 | 9807 def CheckAllLabels(expected): |
| 9808 actual = DoGet(_REMOTE, '/tools/labels') | |
| 9809 self.assertEqual(len(actual), len(expected)) | |
| 9810 for i in expected: | |
| 9811 self.assertTrue(i in actual) | |
| 9812 for i in actual: | |
| 9813 self.assertTrue(i in expected) | |
| 9814 | |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9815 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9816 DoGet(_REMOTE, '/system') ['HasLabels']): |
| 513 | 9817 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 9818 patient = DoGet(_REMOTE, '/instances/%s/patient' % u) ['ID'] | |
| 9819 study = DoGet(_REMOTE, '/instances/%s/study' % u) ['ID'] | |
| 9820 series = DoGet(_REMOTE, '/instances/%s/series' % u) ['ID'] | |
| 9821 | |
| 9822 for base in [ '/instances/%s' % u, | |
| 9823 '/series/%s' % series, | |
| 9824 '/studies/%s' % study, | |
|
519
b1991073e4d1
test alphanumeric labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
518
diff
changeset
|
9825 '/patients/%s' % patient ]: |
| 521 | 9826 |
| 9827 # no tags by default | |
| 513 | 9828 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 523 | 9829 CheckAllLabels([]) |
| 521 | 9830 |
| 9831 # 404 if requesting a tag that does apply for a resource | |
| 513 | 9832 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9833 |
| 9834 # delete a non existing tag does not generate an error | |
| 513 | 9835 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 9836 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 521 | 9837 |
| 9838 # Not an alphanumeric label -> 400 | |
| 9839 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '%s/labels/@' % base)) | |
| 9840 | |
| 9841 # add a tag | |
| 513 | 9842 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9843 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9844 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 523 | 9845 CheckAllLabels([ 'hello' ]) |
| 521 | 9846 |
| 9847 # double tagging does not generate any error | |
| 9848 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) | |
| 9849 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 9850 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 9851 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9852 | |
| 9853 # add a second tag | |
| 9854 self.assertEqual('', DoPut(_REMOTE, '%s/labels/world' % base)) | |
| 9855 self.assertEqual('', DoGet(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9856 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9857 self.assertEqual(2, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9858 self.assertIn(DoGet(_REMOTE, base) ['Labels'][0], ['hello', 'world']) | |
| 9859 self.assertIn(DoGet(_REMOTE, base) ['Labels'][1], ['hello', 'world']) | |
| 523 | 9860 CheckAllLabels([ 'hello', 'world' ]) |
| 521 | 9861 |
| 9862 # delete the first tag | |
| 513 | 9863 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9864 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9865 self.assertEqual('world', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9866 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 523 | 9867 CheckAllLabels([ 'world' ]) |
| 521 | 9868 |
| 9869 # delete the second tag | |
| 9870 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9871 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 521 | 9872 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/world' % base)) |
| 523 | 9873 CheckAllLabels([ ]) |
| 521 | 9874 |
| 9875 # test all valid chars | |
| 523 | 9876 VALID = r'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789_-' |
| 9877 self.assertEqual('', DoPut(_REMOTE, '%s/labels/%s' % (base, VALID))) | |
| 9878 CheckAllLabels([ VALID ]) | |
| 9879 DoDelete(_REMOTE, '%s/labels/%s' % (base, VALID)) | |
| 9880 CheckAllLabels([ ]) | |
| 9881 | |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9882 else: |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9883 print("Your database backend doesn't support labels") |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9884 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9885 def test_find_labels(self): |
| 548 | 9886 def Execute(labels, constraint, query = { }, level='Instance'): |
| 9887 return DoPost(_REMOTE, '/tools/find', { 'Level' : level, | |
| 525 | 9888 'Query' : query, |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9889 'Labels' : labels, |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9890 'LabelsConstraint' : constraint, }) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9891 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9892 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9893 DoGet(_REMOTE, '/system') ['HasLabels']): |
| 548 | 9894 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 9895 studyId = u["ParentStudy"] | |
| 9896 seriesId = u["ParentSeries"] | |
| 9897 patientId = u["ParentPatient"] | |
| 9898 u = u["ID"] | |
| 9899 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9900 |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9901 # The instance has no label |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9902 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9903 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9904 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9905 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9906 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9907 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9908 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9909 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9910 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9911 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9912 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9913 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9914 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9915 DoPut(_REMOTE, '/instances/%s/labels/a' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9916 # The instance has label "a" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9917 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9918 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9919 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9920 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9921 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9922 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9923 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9924 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9925 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9926 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9927 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9928 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9929 |
| 525 | 9930 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'PatientID' : 'nope' }))) |
| 9931 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : '' }))) | |
| 9932 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
| 9933 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '' }))) | |
| 9934 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
| 9935 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
| 9936 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
| 9937 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '' }))) | |
| 9938 | |
| 9939 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
| 9940 | |
| 9941 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
| 9942 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
| 9943 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
| 9944 self.assertEqual(1, len(Execute([ 'a' ], 'All', { | |
| 9945 'PatientID' : 'ozp00SjY2xG', | |
| 9946 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 9947 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 9948 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 9949 }))) | |
| 9950 | |
| 9951 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'nope' }))) | |
| 9952 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : '' }))) | |
| 9953 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
| 9954 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '' }))) | |
| 9955 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
| 9956 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
| 9957 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
| 9958 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '' }))) | |
| 9959 | |
| 9960 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
| 9961 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
| 9962 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
| 9963 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
| 9964 self.assertEqual(0, len(Execute([ 'b' ], 'All', { | |
| 9965 'PatientID' : 'ozp00SjY2xG', | |
| 9966 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 9967 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 9968 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 9969 }))) | |
| 9970 | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9971 DoPut(_REMOTE, '/instances/%s/labels/b' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9972 # The instance has labels "a" and "b" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9973 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9974 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9975 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9976 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9977 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9978 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9979 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9980 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9981 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9982 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9983 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9984 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
| 524 | 9985 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'All'))) |
| 9986 self.assertEqual(1, len(Execute([ 'b', 'c' ], 'Any'))) | |
| 9987 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'None'))) | |
| 9988 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'All'))) | |
| 9989 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'Any'))) | |
| 9990 self.assertEqual(1, len(Execute([ 'c', 'c' ], 'None'))) | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9991 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9992 DoDelete(_REMOTE, '/instances/%s/labels/a' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9993 # The instance has label "b" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9994 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9995 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9996 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9997 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9998 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9999 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10000 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10001 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10002 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10003 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10004 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10005 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10006 |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10007 DoDelete(_REMOTE, '/instances/%s/labels/b' % u) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10008 # The instance has no more label |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10009 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10010 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10011 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10012 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10013 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10014 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10015 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10016 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10017 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10018 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10019 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10020 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
| 548 | 10021 |
| 10022 | |
| 10023 # tests at series levels (make sure to test only with series levels and with multiple levels) | |
| 10024 DoPut(_REMOTE, '/series/%s/labels/b' % seriesId) | |
| 10025 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10026 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10027 }, 'Series'))) | |
| 10028 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10029 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10030 }, 'Series'))) | |
| 10031 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10032 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10033 }, 'Series'))) | |
| 10034 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10035 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10036 }, 'Series'))) | |
| 10037 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10038 'PatientID' : 'ozp00SjY2xG', | |
| 10039 }, 'Series'))) | |
| 10040 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10041 'PatientID' : 'ozp00SjY2xG', | |
| 10042 }, 'Series'))) | |
| 10043 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10044 'PatientID' : 'ozp00SjY2xG', | |
| 10045 }, 'Series'))) | |
| 10046 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10047 'PatientID' : 'ozp00SjY2xG', | |
| 10048 }, 'Series'))) | |
| 10049 | |
| 10050 # tests at study levels (make sure to test only with study levels and with multiple levels) | |
| 10051 DoPut(_REMOTE, '/studies/%s/labels/b' % studyId) | |
| 10052 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10053 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10054 }, 'Study'))) | |
| 10055 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10056 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10057 }, 'Study'))) | |
| 10058 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10059 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10060 }, 'Study'))) | |
| 10061 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10062 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10063 }, 'Study'))) | |
| 10064 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10065 'PatientID' : 'ozp00SjY2xG', | |
| 10066 }, 'Study'))) | |
| 10067 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10068 'PatientID' : 'ozp00SjY2xG', | |
| 10069 }, 'Study'))) | |
| 10070 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10071 'PatientID' : 'ozp00SjY2xG', | |
| 10072 }, 'Study'))) | |
| 10073 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10074 'PatientID' : 'ozp00SjY2xG', | |
| 10075 }, 'Study'))) | |
| 10076 | |
| 10077 # tests at patient levels | |
| 10078 DoPut(_REMOTE, '/patients/%s/labels/b' % patientId) | |
| 10079 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10080 'PatientID' : 'ozp00SjY2xG', | |
| 10081 }, 'Patient'))) | |
| 10082 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10083 'PatientID' : 'ozp00SjY2xG', | |
| 10084 }, 'Patient'))) | |
| 10085 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10086 'PatientID' : 'ozp00SjY2xG', | |
| 10087 }, 'Patient'))) | |
| 10088 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10089 'PatientID' : 'ozp00SjY2xG', | |
| 10090 }, 'Patient'))) | |
| 10091 | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
10092 else: |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
10093 print("Your database backend doesn't support labels") |
|
527
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10094 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10095 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10096 def test_numeric_metadata(self): |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10097 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10098 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10099 study = DoGet(_REMOTE, '/instances/%s/study' % instance)['ID'] |
|
86456045ac80
added test_numeric_metadata
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|
10100 |
|
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|
10101 m = DoGet(_REMOTE, '/studies/%s/metadata' % study) |
|
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|
10102 self.assertEqual(2, len(m)) |
|
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diff
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|
10103 self.assertTrue('LastUpdate' in m) |
|
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added test_numeric_metadata
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diff
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|
10104 self.assertTrue('MainDicomTagsSignature' in m) |
|
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diff
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|
10105 lastUpdate = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'LastUpdate')) |
|
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|
10106 signature = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'MainDicomTagsSignature')) |
|
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|
10107 |
|
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|
10108 m = DoGet(_REMOTE, '/studies/%s/metadata?numeric' % study) |
|
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|
10109 self.assertEqual(2, len(m)) |
|
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|
10110 self.assertTrue(7 in m) # MetadataType_LastUpdate |
|
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|
10111 self.assertTrue(15 in m) # MetadataType_MainDicomTagsSignature |
|
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|
10112 self.assertEqual(lastUpdate, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 7))) |
|
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|
10113 self.assertEqual(signature, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 15))) |
|
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diff
changeset
|
10114 |
|
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changeset
|
10115 m = DoGet(_REMOTE, '/studies/%s/metadata?expand' % study) |
|
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changeset
|
10116 self.assertEqual(2, len(m)) |
|
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diff
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|
10117 self.assertTrue('LastUpdate' in m) |
|
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diff
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|
10118 self.assertTrue('MainDicomTagsSignature' in m) |
|
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|
10119 self.assertEqual(lastUpdate, m['LastUpdate']) |
|
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diff
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|
10120 self.assertEqual(signature, m['MainDicomTagsSignature']) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
10121 |
|
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changeset
|
10122 m = DoGet(_REMOTE, '/studies/%s/metadata?expand&numeric' % study) |
|
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|
10123 self.assertEqual(2, len(m)) |
|
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diff
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|
10124 self.assertTrue('7' in m) |
|
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|
10125 self.assertTrue('15' in m) |
|
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diff
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|
10126 self.assertEqual(lastUpdate, m['7']) |
|
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diff
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|
10127 self.assertEqual(signature, m['15']) |
|
535
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Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
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|
10128 |
|
584
c4f4b0bc908b
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Alain Mazy <am@osimis.io>
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|
10129 def test_expand(self): |
|
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|
10130 # test new expand options introduced in 1.12.2 |
|
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|
10131 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
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Alain Mazy <am@osimis.io>
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|
10132 r = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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Alain Mazy <am@osimis.io>
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|
10133 instanceId = r['ID'] |
|
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diff
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|
10134 seriesId = r['ParentSeries'] |
|
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Alain Mazy <am@osimis.io>
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diff
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|
10135 studyId = r['ParentStudy'] |
|
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diff
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|
10136 |
|
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|
10137 self.assertEqual(DoGet(_REMOTE, '/instances?expand'), DoGet(_REMOTE, '/instances?expand=true')) |
|
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Alain Mazy <am@osimis.io>
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|
10138 self.assertEqual(DoGet(_REMOTE, '/instances'), DoGet(_REMOTE, '/instances?expand=false')) |
|
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diff
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|
10139 |
|
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Alain Mazy <am@osimis.io>
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diff
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|
10140 self.assertEqual(DoGet(_REMOTE, '/series?expand'), DoGet(_REMOTE, '/series?expand=true')) |
|
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Alain Mazy <am@osimis.io>
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|
10141 self.assertEqual(DoGet(_REMOTE, '/series'), DoGet(_REMOTE, '/series?expand=false')) |
|
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Alain Mazy <am@osimis.io>
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diff
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|
10142 |
|
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Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10143 self.assertEqual(DoGet(_REMOTE, '/studies?expand'), DoGet(_REMOTE, '/studies?expand=true')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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diff
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|
10144 self.assertEqual(DoGet(_REMOTE, '/studies'), DoGet(_REMOTE, '/studies?expand=false')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
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|
10145 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10146 r = DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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diff
changeset
|
10147 self.assertEqual(1, len(r)) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10148 self.assertIn('MainDicomTags', r[0]) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10149 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10150 r = DoGet(_REMOTE, '/studies/%s/instances?expand=false' % studyId) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10151 self.assertEqual(1, len(r)) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10152 self.assertIn('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', r[0]) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10153 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10154 self.assertEqual(DoGet(_REMOTE, '/studies/%s/instances?expand' % studyId), DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId)) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10155 self.assertEqual(DoGet(_REMOTE, '/studies/%s/instances' % studyId), DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId)) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10156 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10157 r = DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10158 self.assertEqual(1, len(r)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10159 self.assertIn('MainDicomTags', r[0]) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10160 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10161 r = DoGet(_REMOTE, '/studies/%s/series?expand=false' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10162 self.assertEqual(1, len(r)) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10163 self.assertIn('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', r[0]) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10164 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10165 self.assertEqual(DoGet(_REMOTE, '/studies/%s/series?expand' % studyId), DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
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583
diff
changeset
|
10166 self.assertEqual(DoGet(_REMOTE, '/studies/%s/series' % studyId), DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10167 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10168 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10169 |
|
535
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10170 def test_add_attachment_to_non_existing_resource(self): |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10171 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): # till 1.12.0, it returned a 200 |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10172 (headers, body) = DoPutRaw(_REMOTE, '/instances/11111111-11111111-11111111-11111111-11111111/attachments/1025', 'hello') |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10173 self.assertEqual('404', headers['status']) |
|
538
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10174 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10175 def test_delete_updates_parents_last_update_metadata(self): |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10176 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10177 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm') |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10178 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm') |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10179 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10180 #instanceLastUpdate1 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10181 seriesLastUpdate1 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10182 studyLastUpdate1 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10183 patientLastUpdate1 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10184 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10185 time.sleep(1.01) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10186 DoDelete(_REMOTE, '/instances/%s' % j['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10187 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10188 #instanceLastUpdate2 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10189 seriesLastUpdate2 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10190 studyLastUpdate2 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10191 patientLastUpdate2 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10192 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10193 #self.assertEqual(instanceLastUpdate1, instanceLastUpdate2) |
|
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LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10194 self.assertNotEqual(seriesLastUpdate1, seriesLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
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535
diff
changeset
|
10195 self.assertNotEqual(studyLastUpdate1, studyLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10196 self.assertNotEqual(patientLastUpdate1, patientLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10197 |
|
554
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10198 def test_pixel_data_vr(self): |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
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548
diff
changeset
|
10199 def Check(path, hasPixelData, hasMetadata, expectedVR): |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10200 i = UploadInstance(_REMOTE, path) ['ID'] |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10201 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10202 if hasMetadata: |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10203 self.assertTrue('PixelDataVR' in m) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10204 self.assertEqual(expectedVR, m['PixelDataVR']) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10205 else: |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10206 self.assertFalse('PixelDataVR' in m) |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10207 |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10208 if hasPixelData: |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10209 self.assertTrue('PixelDataOffset' in m) |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10210 j = DoGet(_REMOTE, '/instances/%s/file?expand' % i, headers = { |
|
ede184638961
added test_pixel_data_vr
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parents:
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diff
changeset
|
10211 'Accept': 'application/dicom+json' |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10212 }) |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10213 self.assertEqual(expectedVR, j['7FE00010']['vr']) |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10214 |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10215 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
ede184638961
added test_pixel_data_vr
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parents:
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diff
changeset
|
10216 # File without pixel data |
|
ede184638961
added test_pixel_data_vr
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548
diff
changeset
|
10217 Check('MarekLatin2.dcm', False, False, None) |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10218 |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10219 # Those files are badly formatted, and should be 'OB' |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10220 # according to the DICOM standard => medata is present |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10221 Check('Issue143.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10222 Check('KarstenHilbertRF.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10223 Check('PilatesArgenturGEUltrasoundOsiriX.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10224 |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10225 # Those files are formatted as expected |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10226 Check('ColorTestMalaterre.dcm', True, False, 'OW') # Implicit Little Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10227 Check('Issue94.dcm', True, False, 'OW') # Implicit Little Endian, 16bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10228 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', True, False, 'OB') # Explicit Little Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10229 Check('Phenix/IM-0001-0001.dcm', True, False, 'OW') # Explicit Little Endian, 16bpp |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10230 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', True, False, 'OB') # Explicit Big Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10231 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', True, False, 'OB') # JPEG |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10232 Check('Knee/T1/IM-0001-0001.dcm', True, False, 'OB') # JPEG2k |
|
565
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
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557
diff
changeset
|
10233 |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10234 def test_encapsulate_stl(self): |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10235 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10236 stl = b'Hello, world' |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10237 |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10238 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10239 'Content' : 'data:model/stl;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
added test_encapsulate_stl
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parents:
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diff
changeset
|
10240 'Force' : True, |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10241 'Tags' : { |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10242 'PatientName' : 'Jodogne' |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10243 } |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10244 })) ['ID'] |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10245 |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10246 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10247 self.assertEqual('Jodogne', tags['PatientName']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10248 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10249 self.assertEqual('model/stl', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10250 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.3', tags['SOPClassUID']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10251 |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10252 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10253 'Content' : 'data:model/mtl;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
added test_encapsulate_stl
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parents:
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diff
changeset
|
10254 'Tags' : {} |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10255 })) ['ID'] |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10256 |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10257 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10258 self.assertFalse('PatientName' in tags) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10259 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10260 self.assertEqual('model/mtl', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10261 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.5', tags['SOPClassUID']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10262 |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10263 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10264 'Content' : 'data:model/obj;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10265 'Tags' : {} |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10266 })) ['ID'] |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10267 |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10268 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10269 self.assertFalse('PatientName' in tags) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10270 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10271 self.assertEqual('model/obj', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10272 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.4', tags['SOPClassUID']) |
| 591 | 10273 |
| 10274 | |
| 10275 def test_error_codes_content_type(self): | |
| 10276 | |
| 10277 # from 1.12.2, check that a ContentType header is included in errors with an error description (ex: 404) | |
| 10278 (headers, body) = DoGetRaw(_REMOTE, '/rnm94%3Cscript%3Ealert(1)%3C/script%3Ejdtkc/explorer.html') | |
| 10279 self.assertEqual('404', headers['status']) | |
| 10280 | |
| 10281 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
|
595
b6c1f0c9ca15
fix test_error_codes_content_type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
591
diff
changeset
|
10282 self.assertEqual('text/plain', headers['content-type']) |
| 591 | 10283 |
| 10284 (headers, body) = DoPutRaw(_REMOTE, '/system', 'hello') | |
| 10285 self.assertEqual('405', headers['status']) | |
| 10286 # when there is no body, there is no content-type | |
| 10287 self.assertNotIn('content-type', headers) | |
| 10288 | |
| 10289 # responses with bodies contain x-content-type-options | |
| 10290 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 10291 (headers, body) = DoGetRaw(_REMOTE, '/system') | |
| 10292 self.assertIn('nosniff', headers['x-content-type-options']) | |
| 603 | 10293 |
| 10294 def test_modify_with_labels(self): | |
| 10295 | |
| 606 | 10296 if DoGet(_REMOTE, '/system')['ApiVersion'] < 23 or not DoGet(_REMOTE, '/system')['HasLabels']: |
| 10297 return | |
| 10298 | |
| 603 | 10299 def UploadAndLabel(testId): |
| 10300 DropOrthanc(_REMOTE) | |
| 10301 | |
| 10302 u = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 10303 studyId = u["ParentStudy"] | |
| 10304 seriesId = u["ParentSeries"] | |
| 10305 patientId = u["ParentPatient"] | |
| 10306 instanceId = u["ID"] | |
| 10307 | |
| 10308 if testId == 2: # multi instance study | |
| 10309 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 10310 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 10311 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 10312 | |
| 10313 # add a label to the study before modification | |
| 10314 DoPut(_REMOTE, '/patients/%s/labels/label-patient' % patientId) | |
| 10315 DoPut(_REMOTE, '/studies/%s/labels/label-study' % studyId) | |
| 10316 DoPut(_REMOTE, '/series/%s/labels/label-series' % seriesId) | |
| 10317 DoPut(_REMOTE, '/instances/%s/labels/label-instance' % instanceId) | |
| 10318 | |
| 10319 originalPatient = DoGet(_REMOTE, '/patients/%s' % patientId) | |
| 10320 self.assertEqual(1, len(originalPatient["Labels"])) | |
| 10321 self.assertIn('label-patient', originalPatient["Labels"]) | |
| 10322 | |
| 10323 originalStudy = DoGet(_REMOTE, '/studies/%s' % studyId) | |
| 10324 self.assertEqual(1, len(originalStudy["Labels"])) | |
| 10325 self.assertIn('label-study', originalStudy["Labels"]) | |
| 10326 | |
| 10327 originalSeries = DoGet(_REMOTE, '/series/%s' % seriesId) | |
| 10328 self.assertEqual(1, len(originalSeries["Labels"])) | |
| 10329 self.assertIn('label-series', originalSeries["Labels"]) | |
| 10330 | |
| 10331 originalInstance = DoGet(_REMOTE, '/instances/%s' % instanceId) | |
| 10332 self.assertEqual(1, len(originalInstance["Labels"])) | |
| 10333 self.assertIn('label-instance', originalInstance["Labels"]) | |
| 10334 | |
| 10335 return originalPatient, originalStudy, originalSeries, originalInstance | |
| 10336 | |
| 10337 | |
| 10338 for testId in range(1, 2): #test with a single instance study and a multi instance study | |
| 10339 | |
| 10340 originalPatient, originalStudy, originalSeries, originalInstance = UploadAndLabel(testId) | |
| 10341 | |
| 10342 # modify a study in place with no label field in the payload (default behavior before 1.12.3) | |
| 10343 DoPost(_REMOTE, '/studies/%s/modify' % originalStudy['ID'], { | |
| 10344 'Keep' : ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], | |
| 10345 'Replace' : { | |
| 10346 'PatientName': 'modified' | |
| 10347 }, | |
| 10348 'Force': True | |
| 10349 }) | |
| 10350 | |
| 10351 # with no options, all resources lose their labels during the modification | |
| 10352 modifiedStudy = DoGet(_REMOTE, '/studies/%s' % originalStudy['ID']) | |
| 10353 self.assertEqual(0, len(modifiedStudy["Labels"])) | |
| 10354 self.assertEqual('modified', modifiedStudy["PatientMainDicomTags"]["PatientName"]) | |
| 10355 | |
| 605 | 10356 if IsOrthancVersionAbove(_REMOTE, 1, 12, 3) and DoGet(_REMOTE, '/system')['ApiVersion'] >= 23 and DoGet(_REMOTE, '/system')['HasLabels']: |
| 603 | 10357 for testId in range(1, 2): #test with a single instance study and a multi instance study |
| 10358 | |
| 10359 originalPatient, originalStudy, originalSeries, originalInstance = UploadAndLabel(testId) | |
| 10360 | |
| 10361 # modify a study in place with no label field in the payload (default behavior before 1.12.3) | |
| 10362 DoPost(_REMOTE, '/studies/%s/modify' % originalStudy['ID'], { | |
| 10363 'Keep' : ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], | |
| 10364 'Replace' : { | |
| 10365 'PatientName': 'modified2' | |
| 10366 }, | |
| 10367 'Force': True, | |
| 10368 'KeepLabels': True | |
| 10369 }) | |
| 10370 | |
| 10371 # now, each resource level shall have kept its labels | |
| 10372 | |
| 10373 modifiedInstance = DoGet(_REMOTE, '/instances/%s' % originalInstance['ID']) | |
| 10374 self.assertEqual(1, len(modifiedInstance["Labels"])) | |
| 10375 self.assertIn('label-instance', modifiedInstance["Labels"]) | |
| 10376 | |
| 10377 modifiedSeries = DoGet(_REMOTE, '/series/%s' % originalSeries['ID']) | |
| 10378 self.assertEqual(1, len(modifiedSeries["Labels"])) | |
| 10379 self.assertIn('label-series', modifiedSeries["Labels"]) | |
| 10380 | |
| 10381 modifiedStudy = DoGet(_REMOTE, '/studies/%s' % originalStudy['ID']) | |
| 10382 self.assertEqual(1, len(modifiedStudy["Labels"])) | |
| 10383 self.assertIn('label-study', modifiedStudy["Labels"]) | |
| 10384 self.assertEqual('modified2', modifiedStudy["PatientMainDicomTags"]["PatientName"]) | |
| 10385 | |
| 10386 modifiedPatient = DoGet(_REMOTE, '/patients/%s' % originalPatient['ID']) | |
| 10387 self.assertEqual(1, len(modifiedPatient["Labels"])) | |
| 10388 self.assertIn('label-patient', modifiedPatient["Labels"]) | |
| 10389 | |
| 626 | 10390 def test_findscu_group_length(self): |
| 10391 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') | |
| 10392 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') | |
| 10393 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') | |
| 10394 | |
| 10395 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0008,0000=22' ]) # GE like C-Find that includes group-length | |
| 10396 # print(i) | |
| 10397 s = re.findall('\(0008,0000\).*?\[(.*?)\]', i) | |
| 10398 self.assertEqual(0, len(s)) | |
|
646
0daf680aa3cc
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10399 |
|
652
dfd42a6c13fa
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10400 |
|
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10401 def test_tags_after_pixel_data(self): |
| 653 | 10402 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10403 # https://discourse.orthanc-server.org/t/private-tags-with-group-7fe0-are-not-provided-via-rest-api/4744 | |
| 10404 u = UploadInstance(_REMOTE, '2024-05-30-GuillemVela.dcm') ['ID'] | |
| 10405 | |
| 10406 a = DoGet(_REMOTE, '/instances/%s/tags' % u) | |
| 10407 self.assertFalse('8e05,1000' in a) | |
| 10408 | |
| 10409 a = DoGet(_REMOTE, '/instances/%s/tags?whole' % u) | |
| 10410 self.assertTrue('8e05,1000' in a) | |
| 10411 self.assertEqual('XEOS_Attributes', a['8e05,0010']['Value']) | |
| 10412 self.assertEqual('acquisition', a['8e05,1000']['Value']) | |
| 10413 self.assertEqual('specimen', a['8e05,1001']['Value']) | |
| 10414 | |
| 10415 a = DoGet(_REMOTE, '/instances/%s/tags?full' % u) | |
| 10416 self.assertFalse('8e05,1000' in a) | |
| 10417 | |
| 10418 a = DoGet(_REMOTE, '/instances/%s/tags?full&whole' % u) | |
| 10419 self.assertTrue('8e05,1000' in a) | |
| 10420 self.assertEqual('XEOS_Attributes', a['8e05,0010']['Value']) | |
| 10421 self.assertEqual('acquisition', a['8e05,1000']['Value']) | |
| 10422 self.assertEqual('specimen', a['8e05,1001']['Value']) | |
| 10423 | |
| 10424 a = DoGet(_REMOTE, '/instances/%s/tags?short' % u) | |
| 10425 self.assertFalse('8e05,1000' in a) | |
| 10426 | |
| 10427 a = DoGet(_REMOTE, '/instances/%s/tags?short&whole' % u) | |
| 10428 self.assertTrue('8e05,1000' in a) | |
| 10429 self.assertEqual('XEOS_Attributes', a['8e05,0010']) | |
| 10430 self.assertEqual('acquisition', a['8e05,1000']) | |
| 10431 self.assertEqual('specimen', a['8e05,1001']) | |
| 10432 | |
| 10433 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % u) | |
| 10434 self.assertFalse('Unknown Tag & Data' in a) | |
| 10435 | |
| 10436 a = DoGet(_REMOTE, '/instances/%s/tags?simplify&whole' % u) | |
| 10437 self.assertTrue('Unknown Tag & Data' in a) | |
| 10438 | |
| 10439 a = DoGet(_REMOTE, '/instances/%s/simplified-tags' % u) | |
| 10440 self.assertFalse('Unknown Tag & Data' in a) | |
| 10441 | |
| 10442 a = DoGet(_REMOTE, '/instances/%s/simplified-tags?whole' % u) | |
| 10443 self.assertTrue('Unknown Tag & Data' in a) | |
|
652
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10444 |
|
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10445 |
|
646
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10446 def test_requested_tags(self): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10447 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10448 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10449 def CheckPatientContent(patient): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10450 self.assertEqual(u['ParentPatient'], patient['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10451 self.assertEqual('Patient', patient['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10452 self.assertFalse(patient['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10453 self.assertEqual(0, len(patient['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10454 self.assertTrue('LastUpdate' in patient) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10455 self.assertEqual(2, len(patient['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10456 self.assertEqual('ozp00SjY2xG', patient['MainDicomTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10457 self.assertEqual('KNIX', patient['MainDicomTags']['PatientName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10458 self.assertEqual(1, len(patient['Studies'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10459 self.assertEqual(u['ParentStudy'], patient['Studies'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10460 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10461 def CheckStudyContent(study): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10462 self.assertEqual(u['ParentStudy'], study['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10463 self.assertEqual(u['ParentPatient'], study['ParentPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10464 self.assertEqual('Study', study['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10465 self.assertFalse(study['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10466 self.assertEqual(0, len(study['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10467 self.assertTrue('LastUpdate' in study) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10468 self.assertEqual(7, len(study['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10469 self.assertEqual('0ECJ52puWpVIjTuhnBA0um', study['MainDicomTags']['InstitutionName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10470 self.assertEqual('1', study['MainDicomTags']['ReferringPhysicianName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10471 self.assertEqual('20070101', study['MainDicomTags']['StudyDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10472 self.assertEqual('Knee (R)', study['MainDicomTags']['StudyDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10473 self.assertEqual('1', study['MainDicomTags']['StudyID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10474 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', study['MainDicomTags']['StudyInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10475 self.assertEqual('120000.000000', study['MainDicomTags']['StudyTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10476 self.assertEqual(2, len(study['PatientMainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10477 self.assertEqual('ozp00SjY2xG', study['PatientMainDicomTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10478 self.assertEqual('KNIX', study['PatientMainDicomTags']['PatientName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10479 self.assertEqual(1, len(study['Series'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10480 self.assertEqual(u['ParentSeries'], study['Series'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10481 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10482 def CheckSeriesContent(series): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10483 self.assertEqual(None, series['ExpectedNumberOfInstances']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10484 self.assertEqual('Unknown', series['Status']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10485 self.assertEqual(u['ParentSeries'], series['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10486 self.assertEqual(u['ParentStudy'], series['ParentStudy']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10487 self.assertEqual('Series', series['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10488 self.assertFalse(series['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10489 self.assertEqual(0, len(series['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10490 self.assertTrue('LastUpdate' in series) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10491 self.assertEqual(13, len(series['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10492 self.assertEqual('0', series['MainDicomTags']['CardiacNumberOfImages']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10493 self.assertEqual('0.999841\\0.000366209\\0.0178227\\-0.000427244\\0.999995\\0.00326545', series['MainDicomTags']['ImageOrientationPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10494 self.assertEqual('24', series['MainDicomTags']['ImagesInAcquisition']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10495 self.assertEqual('GE MEDICAL SYSTEMS', series['MainDicomTags']['Manufacturer']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10496 self.assertEqual('MR', series['MainDicomTags']['Modality']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10497 self.assertEqual('ca', series['MainDicomTags']['OperatorsName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10498 self.assertEqual('324-58-2995/6', series['MainDicomTags']['ProtocolName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10499 self.assertEqual('20070101', series['MainDicomTags']['SeriesDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10500 self.assertEqual('AX. FSE PD', series['MainDicomTags']['SeriesDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10501 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', series['MainDicomTags']['SeriesInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10502 self.assertEqual('5', series['MainDicomTags']['SeriesNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10503 self.assertEqual('120000.000000', series['MainDicomTags']['SeriesTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10504 self.assertEqual('TWINOW', series['MainDicomTags']['StationName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10505 self.assertEqual(1, len(series['Instances'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10506 self.assertEqual(u['ID'], series['Instances'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10507 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10508 def CheckInstanceContent(instance): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10509 self.assertEqual(2472, instance['FileSize']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10510 self.assertTrue('FileUuid' in instance) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10511 self.assertEqual(u['ID'], instance['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10512 self.assertEqual(u['ParentSeries'], instance['ParentSeries']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10513 self.assertEqual('Instance', instance['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10514 self.assertEqual(1, instance['IndexInSeries']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10515 self.assertEqual(0, len(instance['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10516 self.assertEqual(7, len(instance['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10517 self.assertEqual('1', instance['MainDicomTags']['AcquisitionNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10518 self.assertEqual('0.999841\\0.000366209\\0.0178227\\-0.000427244\\0.999995\\0.00326545', instance['MainDicomTags']['ImageOrientationPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10519 self.assertEqual('-149.033\\-118.499\\-61.0464', instance['MainDicomTags']['ImagePositionPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10520 self.assertEqual('20070101', instance['MainDicomTags']['InstanceCreationDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10521 self.assertEqual('120000.000000', instance['MainDicomTags']['InstanceCreationTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10522 self.assertEqual('1', instance['MainDicomTags']['InstanceNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10523 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', instance['MainDicomTags']['SOPInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10524 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10525 def CheckRequestedTags(resource): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10526 self.assertEqual(6, len(resource['RequestedTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10527 self.assertEqual('ozp00SjY2xG', resource['RequestedTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10528 self.assertEqual('Knee (R)', resource['RequestedTags']['StudyDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10529 self.assertEqual('AX. FSE PD', resource['RequestedTags']['SeriesDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10530 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', resource['RequestedTags']['SOPClassUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10531 self.assertEqual('2800', resource['RequestedTags']['RepetitionTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10532 self.assertEqual(3, len(resource['RequestedTags']['DerivationCodeSequence'][0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10533 self.assertEqual('121327', resource['RequestedTags']['DerivationCodeSequence'][0]['CodeValue']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10534 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10535 requestedTags = 'PatientID;StudyDescription;SeriesDescription;SOPClassUID;RepetitionTime;DerivationCodeSequence' |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10536 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10537 a = DoGet(_REMOTE, '/patients?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10538 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10539 self.assertEqual(7, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10540 CheckPatientContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10541 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10542 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10543 a = DoGet(_REMOTE, '/patients?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10544 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10545 self.assertEqual(8, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10546 CheckPatientContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10547 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10548 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10549 a = DoGet(_REMOTE, '/studies?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10550 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10551 self.assertEqual(9, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10552 CheckStudyContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10553 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10554 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10555 a = DoGet(_REMOTE, '/studies?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10556 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10557 self.assertEqual(10, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10558 CheckStudyContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10559 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10560 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10561 a = DoGet(_REMOTE, '/series?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10562 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10563 self.assertEqual(10, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10564 CheckSeriesContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10565 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10566 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10567 a = DoGet(_REMOTE, '/series?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10568 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10569 self.assertEqual(11, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10570 CheckSeriesContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10571 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10572 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10573 a = DoGet(_REMOTE, '/instances?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10574 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10575 self.assertEqual(8, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10576 CheckInstanceContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10577 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10578 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10579 a = DoGet(_REMOTE, '/instances?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10580 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10581 self.assertEqual(9, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10582 CheckInstanceContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10583 CheckRequestedTags(a[0]) |
|
647
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10584 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10585 a = DoGet(_REMOTE, '/patients/%s' % u['ParentPatient']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10586 self.assertEqual(7, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10587 CheckPatientContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10588 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10589 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10590 a = DoGet(_REMOTE, '/patients/%s?requestedTags=%s' % (u['ParentPatient'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10591 self.assertEqual(8, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10592 CheckPatientContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10593 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10594 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10595 a = DoGet(_REMOTE, '/studies/%s' % u['ParentStudy']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10596 self.assertEqual(9, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10597 CheckStudyContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10598 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10599 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10600 a = DoGet(_REMOTE, '/studies/%s?requestedTags=%s' % (u['ParentStudy'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10601 self.assertEqual(10, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10602 CheckStudyContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10603 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10604 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10605 a = DoGet(_REMOTE, '/series/%s' % u['ParentSeries']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10606 self.assertEqual(10, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10607 CheckSeriesContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10608 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10609 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10610 a = DoGet(_REMOTE, '/series/%s?requestedTags=%s' % (u['ParentSeries'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10611 self.assertEqual(11, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10612 CheckSeriesContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10613 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10614 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10615 a = DoGet(_REMOTE, '/instances/%s' % u['ID']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10616 self.assertEqual(8, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10617 CheckInstanceContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10618 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10619 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10620 a = DoGet(_REMOTE, '/instances/%s?requestedTags=%s' % (u['ID'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10621 self.assertEqual(9, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10622 CheckInstanceContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10623 CheckRequestedTags(a) |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10624 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10625 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10626 def test_computed_tags(self): |
| 662 | 10627 # curl 'http://alice:orthanctest@localhost:8042/patients/0946fcb6-cf12ab43-bad958c1-bf057ad5-0fc6f54c?requested-tags=0020,1200;0020,1202;0020,1204' |
| 10628 # curl 'http://alice:orthanctest@localhost:8042/studies/6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf?requested-tags=0008,0061;0008,0062;0020,1206;0020,1208' | |
| 10629 # curl 'http://alice:orthanctest@localhost:8042/series/318603c5-03e8cffc-a82b6ee1-3ccd3c1e-18d7e3bb?requested-tags=0020,1209' | |
| 10630 # curl 'http://alice:orthanctest@localhost:8042/instances/ee693caa-9786a685-4f0f9fb0-4411cc8b-988f5574?requested-tags=0008,0056' | |
| 10631 | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10632 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10633 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10634 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10635 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10636 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10637 instance = 'ee693caa-9786a685-4f0f9fb0-4411cc8b-988f5574' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10638 series = '318603c5-03e8cffc-a82b6ee1-3ccd3c1e-18d7e3bb' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10639 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10640 patient = '0946fcb6-cf12ab43-bad958c1-bf057ad5-0fc6f54c' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10641 |
| 685 | 10642 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): # the old syntax is still required for the upgrade/downgrade PG tests |
| 10643 a = DoGet(_REMOTE, '/instances/%s?requested-tags=0008,0056' % instance) | |
| 10644 else: | |
| 10645 a = DoGet(_REMOTE, '/instances/%s?RequestedTags=0008,0056' % instance) | |
| 10646 | |
|
661
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parents:
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changeset
|
10647 self.assertEqual(1, len(a['RequestedTags'])) |
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parents:
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diff
changeset
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10648 self.assertEqual('ONLINE', a['RequestedTags']['InstanceAvailability']) |
|
763e2ccbd0df
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parents:
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diff
changeset
|
10649 |
| 685 | 10650 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10651 a = DoGet(_REMOTE, '/series/%s?requested-tags=0020,1209' % series) | |
| 10652 else: | |
| 10653 a = DoGet(_REMOTE, '/series/%s?RequestedTags=0020,1209' % series) | |
|
661
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parents:
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diff
changeset
|
10654 self.assertEqual(1, len(a['RequestedTags'])) |
|
763e2ccbd0df
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parents:
653
diff
changeset
|
10655 self.assertEqual(2, int(a['RequestedTags']['NumberOfSeriesRelatedInstances'])) |
|
763e2ccbd0df
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parents:
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diff
changeset
|
10656 |
| 685 | 10657 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10658 a = DoGet(_REMOTE, '/studies/%s?requested-tags=0008,0061;0008,0062;0020,1206;0020,1208' % study) | |
| 10659 else: | |
| 10660 a = DoGet(_REMOTE, '/studies/%s?RequestedTags=0008,0061;0008,0062;0020,1206;0020,1208' % study) | |
| 10661 | |
|
661
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parents:
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diff
changeset
|
10662 self.assertEqual(4, len(a['RequestedTags'])) |
|
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parents:
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diff
changeset
|
10663 self.assertEqual('CT\\PT', a['RequestedTags']['ModalitiesInStudy']) |
|
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parents:
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diff
changeset
|
10664 self.assertEqual('1.2.840.10008.5.1.4.1.1.128\\1.2.840.10008.5.1.4.1.1.2', a['RequestedTags']['SOPClassesInStudy']) |
|
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parents:
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diff
changeset
|
10665 self.assertEqual(2, int(a['RequestedTags']['NumberOfStudyRelatedSeries'])) |
|
763e2ccbd0df
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parents:
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diff
changeset
|
10666 self.assertEqual(4, int(a['RequestedTags']['NumberOfStudyRelatedInstances'])) |
|
763e2ccbd0df
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parents:
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diff
changeset
|
10667 |
| 685 | 10668 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10669 a = DoGet(_REMOTE, '/patients/%s?requested-tags=0020,1200;0020,1202;0020,1204' % patient) | |
| 10670 else: | |
| 10671 a = DoGet(_REMOTE, '/studies/%s?RequestedTags=0020,1200;0020,1202;0020,1204' % study) | |
|
661
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parents:
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diff
changeset
|
10672 self.assertEqual(3, len(a['RequestedTags'])) |
|
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parents:
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diff
changeset
|
10673 self.assertEqual(1, int(a['RequestedTags']['NumberOfPatientRelatedStudies'])) |
|
763e2ccbd0df
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parents:
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diff
changeset
|
10674 self.assertEqual(2, int(a['RequestedTags']['NumberOfPatientRelatedSeries'])) |
|
763e2ccbd0df
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10675 self.assertEqual(4, int(a['RequestedTags']['NumberOfPatientRelatedInstances'])) |
| 663 | 10676 |
| 10677 def test_computed_tags_and_patient_comments(self): | |
| 10678 UploadInstance(_REMOTE, 'WithEmptyPatientComments.dcm') | |
| 10679 | |
| 10680 # without requesting PatientComments, we get the computed tags | |
| 10681 i = CallFindScu([ '-k', 'PatientID=WITH_COMMENTS', '-k', 'QueryRetrieveLevel=Study', '-k', 'ModalitiesInStudy', '-k', 'NumberOfStudyRelatedSeries', '-k', 'NumberOfStudyRelatedInstances' ]) | |
| 10682 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) | |
| 10683 self.assertEqual(1, len(modalitiesInStudy)) | |
| 10684 self.assertEqual('CT', modalitiesInStudy[0]) | |
| 10685 | |
| 664 | 10686 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): |
| 663 | 10687 # when requesting PatientComments, with 1.12.4, we did not get the computed tags |
| 10688 i = CallFindScu([ '-k', 'PatientID=WITH_COMMENTS', '-k', 'QueryRetrieveLevel=Study', '-k', 'ModalitiesInStudy', '-k', 'NumberOfStudyRelatedSeries', '-k', 'NumberOfStudyRelatedInstances', '-k', 'PatientComments' ]) | |
| 10689 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) | |
| 10690 self.assertEqual(1, len(modalitiesInStudy)) | |
| 10691 self.assertEqual('CT', modalitiesInStudy[0]) | |
| 10692 numberOfStudyRelatedSeries = re.findall('\(0020,1206\).*?\[(.*?)\]', i) | |
| 10693 self.assertEqual(1, len(numberOfStudyRelatedSeries)) | |
| 10694 self.assertEqual(1, int(numberOfStudyRelatedSeries[0])) | |
| 10695 numberOfStudyRelatedInstances = re.findall('\(0020,1208\).*?\[(.*?)\]', i) | |
| 10696 self.assertEqual(1, len(numberOfStudyRelatedInstances)) | |
| 10697 self.assertEqual(1, int(numberOfStudyRelatedInstances[0])) | |
| 10698 | |
| 10699 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 10700 'Expand': True, | |
| 10701 'Query' : { 'PatientID' : 'WITH_COMMENTS'}, | |
| 10702 'RequestedTags': ['ModalitiesInStudy', 'NumberOfStudyRelatedSeries', 'NumberOfStudyRelatedInstances', 'PatientComments']}) | |
| 10703 | |
| 10704 self.assertEqual(4, len(a[0]['RequestedTags'].keys())) | |
| 10705 self.assertEqual(1, int(a[0]['RequestedTags']['NumberOfStudyRelatedSeries'])) | |
| 10706 self.assertEqual(1, int(a[0]['RequestedTags']['NumberOfStudyRelatedInstances'])) | |
| 10707 self.assertEqual('CT', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 10708 self.assertEqual('', a[0]['RequestedTags']['PatientComments']) |