Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 521:8114f67e0f7f
labels: doc
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Fri, 07 Apr 2023 15:04:59 +0200 |
| parents | b1991073e4d1 |
| children | fce9e90acdc2 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2023 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
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34 import time |
| 3 | 35 |
| 11 | 36 from PIL import ImageChops |
| 3 | 37 from Toolbox import * |
| 13 | 38 from xml.dom import minidom |
| 312 | 39 from datetime import datetime |
| 3 | 40 |
| 41 _LOCAL = None | |
| 42 _REMOTE = None | |
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43 _DOCKER = False |
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44 |
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45 |
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46 def SetOrthancParameters(local, remote, withinDocker): |
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47 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 48 _LOCAL = local |
| 49 _REMOTE = remote | |
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50 _DOCKER = withinDocker |
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51 |
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52 |
| 14 | 53 def ExtractDicomTags(rawDicom, tags): |
| 54 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 55 f.write(rawDicom) | |
| 56 f.flush() | |
| 45 | 57 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 58 |
| 59 result = [] | |
| 60 for tag in tags: | |
| 61 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 62 if match == None: | |
| 63 result.append('') | |
| 64 else: | |
| 65 result.append(match.group(1)) | |
| 66 | |
| 67 return result | |
| 68 | |
| 69 | |
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70 def CompareLists(a, b): |
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71 if len(a) != len(b): |
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72 return False |
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73 |
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74 for i in range(len(a)): |
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75 d = a[i] - b[i] |
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76 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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77 return False |
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78 |
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79 return True |
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80 |
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81 |
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82 def CompareTags(a, b, tagsToIgnore): |
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83 for i in tagsToIgnore: |
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84 if i in a: |
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85 del a[i] |
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86 if i in b: |
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87 del b[i] |
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88 |
| 123 | 89 if a.keys() == b.keys(): |
| 90 return True | |
| 91 else: | |
| 92 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 93 return False | |
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94 |
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95 |
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96 def CallFindScu(args): |
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97 p = subprocess.Popen([ FindExecutable('findscu'), |
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98 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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99 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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100 stderr=subprocess.PIPE) |
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101 return p.communicate()[1] |
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102 |
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103 |
| 142 | 104 def GetMoveScuCommand(): |
| 105 return [ | |
| 106 FindExecutable('movescu'), | |
| 107 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 108 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 109 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 110 _REMOTE['Server'], | |
| 111 str(_REMOTE['DicomPort']) | |
| 112 ] | |
| 113 | |
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114 |
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115 def IsDicomUntilPixelDataStored(orthanc): |
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116 # This function detects whether the "StorageCompression" option is |
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117 # "true", OR the storage area does not support read-range |
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118 |
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119 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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120 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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121 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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122 if a != 0x03a0: |
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123 raise Exception('Internal error') |
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124 |
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125 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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126 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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127 raise Exception('Internal error') |
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128 |
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129 DoDelete(orthanc, '/instances/%s' % i) |
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130 |
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131 if len(a) == 1: |
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132 return False |
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133 elif 'dicom-until-pixel-data' in a: |
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134 return True |
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135 else: |
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136 raise Exception('Internal error') |
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137 |
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138 else: |
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139 return False |
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140 |
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141 |
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142 def CallMoveScu(args): |
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143 try: |
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144 subprocess.check_call(GetMoveScuCommand() + args, |
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145 stderr = subprocess.PIPE) |
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146 except subprocess.CalledProcessError as e: |
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147 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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148 # that has been introduced in DCMTK 3.6.2. This error code is |
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149 # expected by some tests that try and C-MOVE non-existing |
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150 # DICOM instances. |
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151 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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152 if e.returncode != 69: |
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153 raise e |
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154 |
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155 |
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156 def GenerateTestSequence(): |
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157 return [ |
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158 { |
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159 'StudyDescription': 'Hello^', |
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160 'ReferencedStudySequence' : [ |
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161 { |
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162 'StudyDescription': 'Toto', |
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163 }, |
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164 { |
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165 'StudyDescription': 'Tata', |
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166 }, |
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167 ] |
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168 }, |
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169 { |
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170 'StudyDescription': 'Sébastien^', |
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171 'StudyDate' : '19700202', |
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172 } |
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173 ] |
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174 |
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175 |
| 3 | 176 class Orthanc(unittest.TestCase): |
| 177 def setUp(self): | |
| 83 | 178 if (sys.version_info >= (3, 0)): |
| 179 # Remove annoying warnings about unclosed socket in Python 3 | |
| 180 import warnings | |
| 181 warnings.simplefilter("ignore", ResourceWarning) | |
| 182 | |
| 508 | 183 print('running : %s' % self.id()) |
| 184 | |
| 3 | 185 DropOrthanc(_LOCAL) |
| 186 DropOrthanc(_REMOTE) | |
| 174 | 187 UninstallLuaCallbacks(_REMOTE) |
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188 |
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189 # Reset stuff possibly set by some integration tests |
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190 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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191 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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192 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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193 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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194 |
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195 for i in [ 'toto', 'tata' ]: |
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196 if i in DoGet(_REMOTE, '/modalities'): |
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197 DoDelete(_REMOTE, '/modalities/%s' % i) |
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198 if i in DoGet(_REMOTE, '/peers'): |
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199 DoDelete(_REMOTE, '/peers/%s' % i) |
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200 |
| 312 | 201 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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202 |
|
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203 def AssertSameImages(self, truth, url): |
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204 im = GetImage(_REMOTE, url) |
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205 self.assertTrue(CompareLists(truth, im.getdata())) |
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206 |
| 3 | 207 |
| 208 def test_system(self): | |
| 177 | 209 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 210 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 211 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 212 | |
| 512 | 213 systemInfo = DoGet(_REMOTE, '/system') |
| 214 | |
| 471 | 215 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 512 | 216 self.assertIn("MainDicomTags", systemInfo) |
| 217 self.assertIn("Patient", systemInfo["MainDicomTags"]) | |
| 218 self.assertIn("Study", systemInfo["MainDicomTags"]) | |
| 219 self.assertIn("Series", systemInfo["MainDicomTags"]) | |
| 220 self.assertIn("Instance", systemInfo["MainDicomTags"]) | |
| 221 | |
| 222 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 223 self.assertIn("UserMetadata", systemInfo) | |
| 224 self.assertEqual(1098, systemInfo['UserMetadata']['my-metadata'] ) | |
| 225 | |
| 177 | 226 if systemInfo["Version"] == "mainline": |
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227 print("Skipping version checks since you're currently in mainline") |
| 177 | 228 return |
| 229 | |
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230 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 7): |
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231 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
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232 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) |
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233 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) |
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234 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) |
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235 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) |
| 3 | 236 |
| 456 | 237 |
| 512 | 238 |
| 3 | 239 def test_upload(self): |
| 173 | 240 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 241 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 242 | |
| 243 sizeDummyCT = 2472 | |
| 244 sizeOverwrite = 2476 | |
| 245 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 246 | |
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247 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 248 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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249 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 250 self.assertEqual(instance, u['ID']) |
| 3 | 251 self.assertEqual('Success', u['Status']) |
| 173 | 252 |
| 183 | 253 if True: |
| 254 # New test for Orthanc 1.4.3 | |
| 255 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 256 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 257 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 258 | |
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259 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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260 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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261 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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262 j = 0 |
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263 else: |
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264 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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265 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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266 |
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267 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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268 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 269 |
| 270 if isCompressed: | |
| 271 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 272 else: | |
| 273 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 274 | |
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275 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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276 self.assertIn('Uuid', attachmentInfo) |
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277 self.assertEqual(1, attachmentInfo['ContentType']) |
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278 |
| 173 | 279 s = sizeDummyCT + j |
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280 |
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281 if isCompressed: |
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282 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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283 else: |
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284 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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285 |
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286 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 287 |
| 3 | 288 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 289 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 290 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 291 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 292 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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293 |
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294 if isCompressed: |
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295 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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296 else: |
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297 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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298 |
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299 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 300 |
| 301 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 302 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 303 self.assertEqual('KNIX', i['PatientName']) |
| 304 | |
| 305 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 306 # Overwriting | |
| 307 self.assertEqual('Success', u['Status']) | |
| 308 else: | |
| 309 self.assertEqual('AlreadyStored', u['Status']) | |
| 310 | |
| 311 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 312 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 313 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 314 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 315 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 316 | |
| 317 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 318 # Overwriting | |
| 319 self.assertEqual('Success', u['Status']) | |
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320 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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321 j2 = 0 |
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322 else: |
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323 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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324 self.assertNotEqual(j, j2) |
| 173 | 325 s2 = sizeOverwrite + j2 |
| 326 self.assertNotEqual(s, s2) | |
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327 if isCompressed: |
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328 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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329 else: |
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330 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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331 |
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332 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 333 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 334 self.assertEqual('ANOTHER', i['PatientName']) | |
| 335 else: | |
| 336 self.assertEqual('AlreadyStored', u['Status']) | |
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337 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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338 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 339 |
| 5 | 340 def test_upload_2(self): |
| 3 | 341 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 342 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 343 self.assertEqual(i, instance['ID']) | |
| 344 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 345 instance['MainDicomTags']['SOPInstanceUID']) | |
| 346 | |
| 347 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 348 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 349 series['MainDicomTags']['SeriesInstanceUID']) | |
| 350 | |
| 351 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 352 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 353 study['MainDicomTags']['StudyInstanceUID']) | |
| 354 | |
| 355 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 356 self.assertEqual('ozp00SjY2xG', | |
| 357 patient['MainDicomTags']['PatientID']) | |
| 358 | |
| 359 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 360 self.assertEqual(2472, len(dicom)) | |
| 361 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 362 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 363 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 364 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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365 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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366 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 367 |
| 368 | |
| 5 | 369 def test_images(self): |
| 370 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 371 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 372 |
| 5 | 373 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 374 self.assertEqual("L", im.mode) | |
| 375 self.assertEqual(512, im.size[0]) | |
| 376 self.assertEqual(358, im.size[1]) | |
| 377 | |
| 378 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 379 self.assertEqual("L", im.mode) | |
| 380 self.assertEqual(512, im.size[0]) | |
| 381 self.assertEqual(358, im.size[1]) | |
| 382 | |
| 383 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 384 self.assertEqual(512, im.size[0]) | |
| 385 self.assertEqual(358, im.size[1]) | |
| 386 | |
| 387 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 388 self.assertEqual("L", im.mode) | |
| 389 self.assertEqual(512, im.size[0]) | |
| 390 self.assertEqual(358, im.size[1]) | |
| 391 | |
| 392 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 393 self.assertEqual("L", im.mode) | |
| 394 self.assertEqual(512, im.size[0]) | |
| 395 self.assertEqual(358, im.size[1]) | |
| 396 | |
| 397 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 398 self.assertEqual(512, im.size[0]) | |
| 399 self.assertEqual(358, im.size[1]) | |
| 64 | 400 |
| 401 # This is Little Endian Explicit | |
| 402 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 403 | |
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404 def test_images_implicit_vr(self): |
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405 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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406 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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407 |
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408 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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409 self.assertEqual("RGB", im.mode) |
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410 self.assertEqual(800, im.size[0]) |
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411 self.assertEqual(600, im.size[1]) |
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412 |
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413 |
| 6 | 414 def test_hierarchy(self): |
| 415 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 416 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 417 UploadFolder(_REMOTE, 'Knee/T1') | |
| 418 UploadFolder(_REMOTE, 'Knee/T2') | |
| 419 | |
| 420 p = DoGet(_REMOTE, '/patients') | |
| 421 s = DoGet(_REMOTE, '/studies') | |
| 422 t = DoGet(_REMOTE, '/series') | |
| 423 self.assertEqual(2, len(p)) | |
| 424 self.assertEqual(2, len(s)) | |
| 425 self.assertEqual(4, len(t)) | |
| 426 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 427 | |
| 428 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 429 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 430 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 431 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 432 | |
| 433 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 434 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 435 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 436 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 437 | |
| 438 self.assertTrue(brainixPatient in p) | |
| 439 self.assertTrue(kneePatient in p) | |
| 440 self.assertTrue(brainixStudy in s) | |
| 441 self.assertTrue(kneeStudy in s) | |
| 442 self.assertTrue(brainixEpi in t) | |
| 443 self.assertTrue(brainixFlair in t) | |
| 444 self.assertTrue(kneeT1 in t) | |
| 445 self.assertTrue(kneeT2 in t) | |
| 446 | |
| 447 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 448 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 449 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 450 | |
| 451 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 452 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 453 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 454 | |
| 455 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 456 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 457 | |
| 458 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 459 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 460 | |
| 461 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 462 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 463 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 464 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 465 | |
| 466 for patient in p: | |
| 467 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 468 self.assertEqual(patient, study['ParentPatient']) | |
| 469 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 470 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 471 self.assertEqual('Unknown', series['Status']) |
| 6 | 472 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 473 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 474 | |
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475 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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476 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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477 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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478 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 479 |
| 480 | |
| 481 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 482 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 483 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 484 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 485 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 486 self.assertEqual(None, r) | |
| 487 | |
| 488 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 489 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 490 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 491 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 492 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 493 self.assertEqual('Study', r['Type']) | |
| 494 self.assertEqual(kneeStudy, r['ID']) | |
| 495 | |
| 496 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 497 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 498 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 499 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 500 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 501 self.assertEqual('Series', r['Type']) | |
| 502 self.assertEqual(kneeT1, r['ID']) | |
| 503 | |
| 504 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 505 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 506 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 507 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 508 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 509 self.assertEqual(None, r) | |
| 510 | |
| 511 DropOrthanc(_REMOTE) | |
| 512 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 513 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 514 |
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515 def test_delete_cascade(self): |
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516 # make sure deleting the last instance of a study deletes the series, study and patient |
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517 |
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518 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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519 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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520 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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521 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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522 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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523 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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524 |
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525 DoDelete(_REMOTE, '/instances/%s' % a) |
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526 |
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527 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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528 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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529 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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530 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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531 |
| 7 | 532 |
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533 def test_multiframe(self): |
| 7 | 534 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 535 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 536 | |
| 537 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 538 self.assertEqual("L", im.mode) | |
| 539 self.assertEqual(512, im.size[0]) | |
| 540 self.assertEqual(512, im.size[1]) | |
| 541 | |
| 542 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 543 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 544 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 545 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 546 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 547 | |
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548 |
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549 def test_changes(self): |
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550 # Check emptiness |
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551 c = DoGet(_REMOTE, '/changes') |
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552 self.assertEqual(0, len(c['Changes'])) |
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553 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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554 self.assertTrue(c['Done']) |
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555 c = DoGet(_REMOTE, '/changes?last') |
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556 self.assertEqual(0, len(c['Changes'])) |
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557 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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558 self.assertTrue(c['Done']) |
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559 |
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560 # Add 1 instance |
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561 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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562 c = DoGet(_REMOTE, '/changes') |
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563 begin = c['Last'] |
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564 self.assertEqual(4, len(c['Changes'])) |
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565 self.assertTrue(c['Done']) |
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566 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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567 |
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568 # Check the order in which the creation events are reported |
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569 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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570 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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571 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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572 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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573 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
574 c = DoGet(_REMOTE, '/changes?last') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
575 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
576 self.assertEqual(begin, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
577 self.assertTrue(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
578 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
579 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
580 self.assertEqual(begin, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
581 self.assertTrue(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
582 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
583 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
584 self.assertEqual(begin - 1, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
585 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
586 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
587 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
588 self.assertEqual(begin - 2, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
589 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
590 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
591 UploadFolder(_REMOTE, 'Knee/T1') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
592 UploadFolder(_REMOTE, 'Knee/T2') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
593 since = begin |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
594 countPatients = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
595 countStudies = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
596 countSeries = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
597 countInstances = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
598 completed = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
599 while True: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
600 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
601 since = c['Last'] |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
602 for i in c['Changes']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
603 if i['ResourceType'] == 'Instance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
604 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
605 if i['ResourceType'] == 'Patient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
606 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
607 if i['ResourceType'] == 'Study': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
608 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
609 if i['ResourceType'] == 'Series': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
610 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
611 if i['ChangeType'] == 'NewInstance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
612 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
613 if i['ChangeType'] == 'NewPatient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
614 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
615 if i['ChangeType'] == 'NewStudy': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
616 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
617 if i['ChangeType'] == 'NewSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
618 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
619 if i['ChangeType'] == 'CompletedSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
620 completed += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
621 self.assertTrue('ID' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
622 self.assertTrue('Path' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
623 self.assertTrue('Seq' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
624 if c['Done']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
625 break |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
626 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
627 self.assertEqual(2 * 50, countInstances) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
628 self.assertEqual(2 * 1, countPatients) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
629 self.assertEqual(2 * 1, countStudies) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
630 self.assertEqual(2 * 2, countSeries) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
631 self.assertEqual(0, completed) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
632 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
633 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
634 def test_archive(self): |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
635 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
636 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 637 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 638 | |
| 639 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
640 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
641 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
642 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
643 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
644 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
645 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
646 self.assertEqual(1, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
647 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
648 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 649 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 650 | |
| 651 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
652 self.assertEqual(2, len(z.namelist())) |
| 192 | 653 |
| 654 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 655 'Resources' : [ brainix, knee ] | |
| 656 }) | |
| 657 self.assertEqual(3, len(z.namelist())) | |
|
403
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
658 |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
659 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
660 'Synchronous' : True |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
661 }) |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
662 self.assertEqual(2, len(z.namelist())) |
| 192 | 663 |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
664 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
665 def test_media_archive(self): |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
666 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
667 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
668 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
669 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
670 self.assertEqual(3, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
671 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
672 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
673 self.assertTrue('DICOMDIR' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
674 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
675 try: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
676 os.remove('/tmp/DICOMDIR') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
677 except: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
678 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
679 pass |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
680 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
681 z.extract('DICOMDIR', '/tmp') |
| 45 | 682 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
683 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
684 self.assertEqual(3, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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685 self.assertTrue(a[0].startswith('Warning')) |
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test_changes, test_archive, test_media_archive
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parents:
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686 self.assertEqual('BasicDirectory', a[1]) |
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parents:
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|
687 self.assertEqual('', a[2]) |
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changeset
|
688 |
| 45 | 689 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
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|
690 stderr = subprocess.STDOUT).split('\n') |
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test_changes, test_archive, test_media_archive
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parents:
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changeset
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691 self.assertEqual(1, len(a)) |
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test_changes, test_archive, test_media_archive
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parents:
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692 self.assertEqual('', a[0]) |
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test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
693 |
| 45 | 694 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
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8
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test_changes, test_archive, test_media_archive
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695 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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test_changes, test_archive, test_media_archive
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parents:
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changeset
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696 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
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test_changes, test_archive, test_media_archive
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parents:
7
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changeset
|
697 |
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parents:
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698 os.remove('/tmp/DICOMDIR') |
| 10 | 699 |
| 700 | |
| 701 def test_protection(self): | |
| 702 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 703 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 704 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 705 a = DoGet(_REMOTE, '/patients')[0] | |
| 706 b = DoGet(_REMOTE, '/patients')[1] | |
| 707 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 708 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 709 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 710 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 711 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 712 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 713 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 714 | |
| 715 | |
| 12 | 716 def test_raw_tags(self): |
| 10 | 717 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 718 | |
| 719 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 720 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 721 | |
| 722 s = '/instances/%s/content/' % i | |
| 723 | |
| 724 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 725 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 726 | |
| 727 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 728 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 729 | |
| 730 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 731 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 732 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 733 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 734 | |
| 735 for i in DoGet(_REMOTE, '/instances'): | |
| 736 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 737 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 738 | |
| 739 | |
| 740 def test_raw_tags_mdn(self): | |
| 741 # Bug reported by Cyril Paulus | |
| 742 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 743 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 744 | |
| 745 | |
| 746 def test_modify_instance(self): | |
| 747 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 748 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 749 json.dumps({ | |
| 750 "Replace" : { | |
| 751 "PatientName" : "hello", | |
| 752 #"PatientID" : "world" | |
| 753 }, | |
| 754 "Remove" : [ "StationName" ], | |
|
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test_bitbucket_issue_55
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parents:
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changeset
|
755 "RemovePrivateTags" : True |
| 10 | 756 }), |
| 757 'application/json') | |
| 758 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 759 | |
| 760 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 761 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 762 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 763 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 764 | |
| 765 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 766 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 767 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 768 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 769 | |
| 770 | |
| 771 def test_modify_series(self): | |
| 772 # Upload 4 images from the same series | |
| 773 for i in range(4): | |
| 774 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 775 | |
| 776 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 777 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 778 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 779 'application/json')['ID'] | |
| 780 | |
| 781 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 782 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 783 self.assertEqual(4, len(instances)) | |
| 784 for i in instances: | |
| 785 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 786 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 787 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 788 | |
| 789 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 790 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 791 | |
| 792 | |
| 793 def test_modify_study(self): | |
| 794 # Upload 4 images from the 2 series of the same study | |
| 795 for i in range(4): | |
| 796 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 797 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 798 | |
| 799 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 800 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 801 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 802 'application/json')['ID'] | |
| 803 | |
| 804 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 805 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 806 self.assertEqual(2, len(series)) | |
| 807 for s in series: | |
| 808 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 809 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 810 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 811 | |
| 812 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 813 for i in instances: | |
| 814 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 815 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 816 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 817 | |
| 818 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 819 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 820 | |
| 821 | |
| 822 def test_anonymize_series(self): | |
| 823 # Upload 4 images from the same series | |
| 824 for i in range(4): | |
| 825 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 826 | |
| 827 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 828 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 829 '{}', | |
| 830 'application/json')['ID'] | |
| 831 | |
| 832 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 833 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 834 self.assertEqual(4, len(instances)) | |
| 835 for i in instances: | |
| 836 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 837 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 838 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 839 | |
| 840 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 841 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 842 | |
| 843 | |
| 844 def test_anonymize_study(self): | |
| 845 # Upload 4 images from the 2 series of the same study | |
| 846 for i in range(4): | |
| 847 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 848 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 849 | |
| 850 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 851 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 852 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 853 'application/json')['ID'] | |
| 854 | |
| 855 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 856 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 857 self.assertEqual(2, len(series)) | |
| 858 for s in series: | |
| 859 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 860 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 861 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 862 | |
| 863 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 864 for i in instances: | |
| 865 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 866 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 867 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 868 | |
| 869 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 870 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 871 |
| 872 | |
| 873 | |
| 874 def test_storescu(self): | |
| 875 # Check emptiness | |
| 876 e = DoGet(_REMOTE, '/exports') | |
| 877 self.assertEqual(0, len(e['Exports'])) | |
| 878 self.assertEqual(0, e['Last']) | |
| 879 self.assertTrue(e['Done']) | |
| 880 e = DoGet(_REMOTE, '/exports?last') | |
| 881 self.assertEqual(0, len(e['Exports'])) | |
| 882 self.assertEqual(0, e['Last']) | |
| 883 self.assertTrue(e['Done']) | |
| 884 | |
| 885 # Add 1 instance | |
| 886 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 887 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 888 | |
| 889 # Export the instance | |
| 890 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 891 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 892 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 893 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 894 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 895 | |
| 896 e = DoGet(_REMOTE, '/exports') | |
| 897 self.assertEqual(1, len(e['Exports'])) | |
| 898 self.assertTrue(e['Done']) | |
| 899 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 900 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 901 self.assertEqual(1, len(e['Exports'])) | |
| 902 self.assertTrue(e['Done']) | |
| 903 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 904 e = DoGet(_REMOTE, '/exports?last') | |
| 905 self.assertEqual(1, len(e['Exports'])) | |
| 906 self.assertTrue(e['Done']) | |
| 907 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 908 seqInstance = e['Last'] | |
| 909 | |
| 910 # Export the series | |
| 911 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 912 | |
| 913 e = DoGet(_REMOTE, '/exports') | |
| 914 self.assertEqual(2, len(e['Exports'])) | |
| 915 self.assertTrue(e['Done']) | |
| 916 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 917 seqSeries = e['Last'] | |
| 918 self.assertNotEqual(seqInstance, seqSeries) | |
| 919 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 920 self.assertEqual(1, len(e['Exports'])) | |
| 921 self.assertFalse(e['Done']) | |
| 922 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 923 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 924 self.assertEqual(1, len(e['Exports'])) | |
| 925 self.assertTrue(e['Done']) | |
| 926 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 927 e = DoGet(_REMOTE, '/exports?last') | |
| 928 self.assertEqual(1, len(e['Exports'])) | |
| 929 self.assertTrue(e['Done']) | |
| 930 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 931 | |
| 932 # Export the study | |
| 933 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 934 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 935 | |
| 936 # Export the patient | |
| 937 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 938 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 939 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 940 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 941 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 942 | |
| 943 e = DoGet(_REMOTE, '/exports') | |
| 944 self.assertEqual(4, len(e['Exports'])) | |
| 945 self.assertTrue(e['Done']) | |
| 946 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 947 seqPatient = e['Last'] | |
| 948 self.assertNotEqual(seqInstance, seqSeries) | |
| 949 self.assertNotEqual(seqSeries, seqStudy) | |
| 950 self.assertNotEqual(seqStudy, seqPatient) | |
| 951 self.assertTrue(seqInstance < seqSeries) | |
| 952 self.assertTrue(seqSeries < seqStudy) | |
| 953 self.assertTrue(seqStudy < seqPatient) | |
| 954 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 955 self.assertEqual(1, len(e['Exports'])) | |
| 956 self.assertFalse(e['Done']) | |
| 957 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 958 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 959 self.assertEqual(1, len(e['Exports'])) | |
| 960 self.assertFalse(e['Done']) | |
| 961 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 962 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 963 self.assertEqual(1, len(e['Exports'])) | |
| 964 self.assertFalse(e['Done']) | |
| 965 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 966 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 967 self.assertEqual(1, len(e['Exports'])) | |
| 968 self.assertTrue(e['Done']) | |
| 969 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 970 e = DoGet(_REMOTE, '/exports?last') | |
| 971 self.assertEqual(1, len(e['Exports'])) | |
| 972 self.assertTrue(e['Done']) | |
| 973 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 974 | |
| 975 | |
| 976 # Check the content of the logged information | |
| 977 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 978 | |
| 979 if 'PatientID' in e[0]: | |
| 980 # Since Orthanc 0.8.6 | |
| 981 patient = 'PatientID' | |
| 982 study = 'StudyInstanceUID' | |
| 983 series = 'SeriesInstanceUID' | |
| 984 instance = 'SOPInstanceUID' | |
| 985 else: | |
| 986 # Up to Orthanc 0.8.5 | |
| 987 patient = 'PatientId' | |
| 988 study = 'StudyInstanceUid' | |
| 989 series = 'SeriesInstanceUid' | |
| 990 instance = 'SopInstanceUid' | |
| 991 | |
| 992 for k in range(4): | |
| 993 self.assertTrue('Date' in e[k]) | |
| 994 self.assertTrue('Seq' in e[k]) | |
| 995 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 996 | |
| 997 self.assertEqual(10, len(e[0])) | |
| 998 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 999 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 1000 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 1001 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 1002 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 1003 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 1004 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 1005 | |
| 1006 self.assertEqual(9, len(e[1])) | |
| 1007 self.assertEqual('Series', e[1]['ResourceType']) | |
| 1008 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 1009 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 1010 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 1011 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 1012 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 1013 | |
| 1014 self.assertEqual(8, len(e[2])) | |
| 1015 self.assertEqual('Study', e[2]['ResourceType']) | |
| 1016 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 1017 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 1018 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1019 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1020 | |
| 1021 self.assertEqual(7, len(e[3])) | |
| 1022 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1023 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1024 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1025 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1026 | |
| 1027 DropOrthanc(_REMOTE) | |
| 1028 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1029 | |
| 1030 | |
| 1031 def test_store_peer(self): | |
| 1032 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1033 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1034 | |
| 1035 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1036 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1037 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1038 | |
| 1039 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1040 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1041 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1042 | |
| 1043 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1044 | |
| 1045 DropOrthanc(_REMOTE) | |
| 1046 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1047 | |
| 1048 | |
| 1049 def test_bulk_storescu(self): | |
| 1050 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1051 | |
| 1052 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1053 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1054 | |
| 1055 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1056 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1057 | |
| 1058 DropOrthanc(_LOCAL) | |
| 1059 | |
| 1060 # Send using patient's UUID | |
| 1061 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1062 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1063 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1064 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1065 | |
| 1066 | |
| 1067 def test_color(self): | |
| 1068 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1069 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1070 self.assertEqual("RGB", im.mode) | |
| 1071 self.assertEqual(41, im.size[0]) | |
| 1072 self.assertEqual(41, im.size[1]) | |
| 1073 | |
| 1074 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1075 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1076 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1077 | |
| 1078 | |
| 12 | 1079 def test_faking_ruby_put(self): |
| 1080 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1081 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1082 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1083 a = DoGet(_REMOTE, '/patients')[0] | |
| 1084 b = DoGet(_REMOTE, '/patients')[1] | |
| 1085 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1086 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1087 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1088 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1089 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1090 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1091 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1092 | |
| 1093 | |
| 1094 def test_faking_ruby_delete(self): | |
| 1095 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1096 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1097 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1098 a = DoGet(_REMOTE, '/patients')[0] | |
| 1099 b = DoGet(_REMOTE, '/patients')[1] | |
| 1100 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1101 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1102 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1103 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1104 | |
| 1105 | |
| 1106 def test_faking_google_put(self): | |
| 1107 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1108 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1109 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1110 a = DoGet(_REMOTE, '/patients')[0] | |
| 1111 b = DoGet(_REMOTE, '/patients')[1] | |
| 1112 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1113 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1114 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1115 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1116 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1117 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1118 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1119 | |
| 1120 | |
| 1121 def test_faking_google_delete(self): | |
| 1122 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1123 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1124 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1125 a = DoGet(_REMOTE, '/patients')[0] | |
| 1126 b = DoGet(_REMOTE, '/patients')[1] | |
| 1127 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1128 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1129 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1130 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1131 | |
| 1132 | |
| 1133 def test_lua(self): | |
| 1134 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1135 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1136 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1137 | |
| 1138 | |
| 1139 def test_metadata(self): | |
| 1140 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1141 p = DoGet(_REMOTE, '/patients')[0] | |
| 1142 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1143 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1144 |
| 1145 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
|
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1146 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1147 self.assertEqual(2, len(m)) |
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1148 self.assertTrue('MainDicomTagsSignature' in m) |
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1149 else: |
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1150 self.assertEqual(1, len(m)) |
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1151 self.assertTrue('LastUpdate' in m) |
| 12 | 1152 |
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1153 # The lines below failed on Orthanc <= 1.8.2 |
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1154 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1155 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1156 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1157 |
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1158 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1159 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1160 self.assertEqual(2, len(m)) |
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1161 self.assertTrue('MainDicomTagsSignature' in m) |
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1162 else: |
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1163 self.assertEqual(1, len(m)) |
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1164 self.assertTrue('LastUpdate' in m) |
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1165 |
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1166 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
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1167 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1168 self.assertEqual(3, len(m)) |
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1169 self.assertTrue('MainDicomTagsSignature' in m) |
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1170 else: |
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1171 self.assertEqual(2, len(m)) |
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1172 self.assertTrue('LastUpdate' in m) |
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1173 |
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1174 # New in Orthanc 1.9.0 |
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1175 self.assertTrue('RemoteAET' in m) |
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1176 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1177 |
| 12 | 1178 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
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1179 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1180 self.assertEqual(10, len(m)) |
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1181 self.assertTrue('MainDicomTagsSignature' in m) |
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1182 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1183 self.assertEqual(9, len(m)) |
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1184 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1185 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1186 else: |
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1187 self.assertEqual(8, len(m)) |
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1188 |
| 12 | 1189 self.assertTrue('IndexInSeries' in m) |
| 1190 self.assertTrue('ReceptionDate' in m) | |
| 1191 self.assertTrue('RemoteAET' in m) | |
|
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1192 self.assertTrue('Origin' in m) |
|
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1193 self.assertTrue('TransferSyntax' in m) |
|
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1194 self.assertTrue('SopClassUid' in m) |
| 145 | 1195 self.assertTrue('RemoteIP' in m) |
| 1196 self.assertTrue('HttpUsername' in m) | |
|
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1197 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1198 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1199 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1200 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1201 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1202 |
| 1203 # Play with custom metadata | |
|
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1204 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1205 self.assertEqual('200', headers['status']) |
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1206 self.assertEqual('', body) |
|
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1207 |
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1208 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
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1209 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1210 else: |
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1211 self.assertFalse('ETag' in headers) |
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1212 self.assertFalse('etag' in headers) |
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1213 |
| 12 | 1214 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1215 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1216 self.assertEqual(3, len(m)) |
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1217 self.assertTrue('MainDicomTagsSignature' in m) |
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1218 else: |
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1219 self.assertEqual(2, len(m)) |
| 12 | 1220 self.assertTrue('LastUpdate' in m) |
| 1221 self.assertTrue('5555' in m) | |
| 1222 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1223 |
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|
1224 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1225 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
|
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|
1226 'If-Match' : headers['etag'] |
|
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|
1227 }) |
|
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|
1228 else: |
|
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|
1229 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
391
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|
1230 |
|
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|
1231 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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1232 self.assertEqual('200', headers['status']) |
|
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|
1233 self.assertEqual('hello', body) |
|
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|
1234 |
|
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|
1235 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1236 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
|
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|
1237 'If-Match' : headers['etag'] |
|
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|
1238 }) |
|
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|
1239 else: |
|
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|
1240 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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|
1241 |
| 12 | 1242 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
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diff
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|
1243 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
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diff
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|
1244 self.assertEqual(2, len(m)) |
|
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new metadata MainDicomTagsSignature
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diff
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|
1245 self.assertTrue('MainDicomTagsSignature' in m) |
|
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|
1246 else: |
|
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|
1247 self.assertEqual(1, len(m)) |
| 12 | 1248 self.assertTrue('LastUpdate' in m) |
| 13 | 1249 |
| 1250 | |
| 1251 def test_statistics(self): | |
| 1252 # Upload 16 instances | |
| 1253 for i in range(4): | |
| 1254 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1255 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1256 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1257 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1258 | |
| 1259 s = DoGet(_REMOTE, '/statistics') | |
| 1260 self.assertEqual(16, s['CountInstances']) | |
| 1261 self.assertEqual(2, s['CountPatients']) | |
| 1262 self.assertEqual(2, s['CountStudies']) | |
| 1263 self.assertEqual(4, s['CountSeries']) | |
| 1264 d = int(s['TotalUncompressedSize']) | |
| 1265 | |
| 1266 e = 0 | |
| 1267 for patient in DoGet(_REMOTE, '/patients'): | |
| 1268 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1269 self.assertEqual(8, s['CountInstances']) | |
| 1270 self.assertEqual(1, s['CountStudies']) | |
| 1271 self.assertEqual(2, s['CountSeries']) | |
| 1272 e += int(s['UncompressedSize']) | |
| 1273 | |
| 1274 for study in DoGet(_REMOTE, '/studies'): | |
| 1275 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1276 self.assertEqual(8, s['CountInstances']) | |
| 1277 self.assertEqual(2, s['CountSeries']) | |
| 1278 e += int(s['UncompressedSize']) | |
| 1279 | |
| 1280 for series in DoGet(_REMOTE, '/series'): | |
| 1281 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1282 self.assertEqual(4, s['CountInstances']) | |
| 1283 e += int(s['UncompressedSize']) | |
| 1284 | |
| 1285 self.assertEqual(3 * d, e) | |
| 1286 | |
| 1287 | |
| 1288 def test_custom_attachment(self): | |
|
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1289 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
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|
1290 |
| 13 | 1291 patient = DoGet(_REMOTE, '/patients')[0] |
| 1292 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1293 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1294 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1295 | |
| 1296 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1297 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
380
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|
1298 |
|
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|
1299 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
1300 if IsDicomUntilPixelDataStored(_REMOTE): |
|
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|
1301 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1302 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
443
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|
1303 |
|
448
63f475995400
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|
1304 # New in Orthanc 1.10.0 |
|
443
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|
1305 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1306 self.assertEqual(2, len(a)) |
|
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|
1307 self.assertEqual(1, a['dicom']) |
|
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|
1308 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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|
1309 |
|
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|
1310 else: |
|
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|
1311 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
443
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|
1312 |
|
448
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diff
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|
1313 # New in Orthanc 1.10.0 |
|
443
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diff
changeset
|
1314 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1315 self.assertEqual(1, len(a)) |
|
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diff
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|
1316 self.assertEqual(1, a['dicom']) |
|
380
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|
1317 else: |
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|
1318 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1319 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1320 |
|
448
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Orthanc 1.9.8 is now known as Orthanc 1.10.0
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447
diff
changeset
|
1321 # New in Orthanc 1.10.0 |
|
443
97fca09bf849
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442
diff
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|
1322 self.assertRaises(Exception, lambda: DoGet( |
|
97fca09bf849
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|
1323 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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|
1324 |
| 13 | 1325 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1326 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1327 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1328 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1329 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1330 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1331 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1332 | |
| 1333 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1334 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1335 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1336 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1337 size + | |
| 1338 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1339 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1340 | |
| 1341 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1342 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1343 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1344 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1345 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
392
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diff
changeset
|
1346 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
397
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diff
changeset
|
1347 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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diff
changeset
|
1348 }) |
|
393
3019306499c5
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diff
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|
1349 |
|
394
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|
1350 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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|
1351 self.assertEqual('200', headers['status']) |
|
393
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diff
changeset
|
1352 self.assertEqual('world2', body) |
| 13 | 1353 |
| 1354 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
392
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changeset
|
1355 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
eb87ec525b53
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changeset
|
1356 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
392
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|
1357 }) |
| 13 | 1358 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1359 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1360 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1361 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1362 | |
| 1363 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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|
1364 |
|
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|
1365 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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changeset
|
1366 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
|
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|
1367 'If-Match' : headers['etag'] |
|
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|
1368 }) |
|
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|
1369 else: |
|
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changeset
|
1370 self.assertFalse('etag' in headers) |
|
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changeset
|
1371 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
|
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|
1372 |
| 13 | 1373 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1374 | |
| 1375 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1376 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1377 | |
| 1378 | |
| 1379 def test_incoming_storescu(self): | |
| 1380 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1381 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
Toolbox.FindExecutable()
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43
diff
changeset
|
1382 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1383 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1384 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1385 | |
|
63
2652d562267a
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diff
changeset
|
1386 i = DoGet(_REMOTE, '/instances') |
|
2652d562267a
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diff
changeset
|
1387 self.assertEqual(1, len(i)) |
|
2652d562267a
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diff
changeset
|
1388 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
379
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|
1389 |
|
451
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diff
changeset
|
1390 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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diff
changeset
|
1391 self.assertEqual(10, len(m)) |
|
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diff
changeset
|
1392 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
|
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1393 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1394 self.assertEqual(9, len(m)) |
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1395 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1396 else: |
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1397 self.assertEqual(8, len(m)) |
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1398 |
|
63
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1399 self.assertTrue('IndexInSeries' in m) |
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1400 self.assertTrue('ReceptionDate' in m) |
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1401 self.assertTrue('RemoteAET' in m) |
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1402 self.assertTrue('Origin' in m) |
|
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1403 self.assertTrue('TransferSyntax' in m) |
|
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1404 self.assertTrue('SopClassUid' in m) |
| 145 | 1405 self.assertTrue('RemoteIP' in m) |
| 1406 self.assertTrue('CalledAET' in m) | |
|
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1407 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1408 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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1409 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
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1410 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
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1411 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
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1412 |
|
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1413 series = DoGet(_REMOTE, '/series')[0] |
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1414 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
451
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1415 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1416 self.assertEqual(3, len(m)) |
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1417 self.assertTrue('MainDicomTagsSignature' in m) |
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1418 else: |
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1419 self.assertEqual(2, len(m)) |
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1420 self.assertTrue('LastUpdate' in m) |
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1421 self.assertTrue('RemoteAET' in m) |
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1422 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1423 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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1424 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1425 |
| 13 | 1426 |
| 1427 def test_incoming_findscu(self): | |
| 1428 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1429 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1430 | |
| 1431 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1432 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1433 self.assertEqual(2, len(patientNames)) | |
| 1434 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1435 self.assertTrue('Anonymized' in patientNames) | |
| 1436 | |
| 1437 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1438 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1439 self.assertEqual(2, len(series)) | |
| 1440 self.assertTrue('20070208' in series) | |
| 1441 self.assertTrue('19980312' in series) | |
| 1442 | |
|
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1443 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
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diff
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|
1444 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
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|
1445 self.assertEqual(1, len(series)) |
|
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|
1446 self.assertTrue('19980312' in series) |
|
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|
1447 |
| 13 | 1448 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1449 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1450 self.assertEqual(1, len(series)) | |
| 1451 | |
| 1452 # Test the "CaseSentitivePN" flag (false by default) | |
| 1453 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1454 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1455 self.assertEqual(1, len(series)) | |
|
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|
1456 |
| 70 | 1457 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1458 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1459 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1460 self.assertEqual(2, len(studies)) | |
| 1461 self.assertTrue('20070208' in studies) | |
| 1462 self.assertTrue('19980312' in studies) | |
| 1463 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1464 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1465 self.assertEqual(1, len(studies)) | |
| 1466 self.assertTrue('19980312' in studies) | |
| 1467 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1468 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1469 self.assertEqual(1, len(studies)) | |
| 1470 self.assertTrue('19980312' in studies) | |
|
326
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1471 |
|
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1472 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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1473 # was *not* the case in Orthanc <= 1.7.2 |
|
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1474 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
|
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|
1475 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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|
1476 self.assertEqual(2, len(instances)) |
|
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|
1477 self.assertEqual('ORTHANC', instances[0].strip()) |
|
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|
1478 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1479 |
| 1480 | |
|
191
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|
1481 def test_incoming_findscu_2(self): |
|
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1482 # This test fails if "LookupMode_DatabaseOnly" is used |
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1483 # (sequences are not available in this mode, and only main |
|
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1484 # DICOM tags are returned) |
|
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1485 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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1486 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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1487 |
|
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1488 # Test returning sequence values (only since Orthanc 0.9.5) |
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1489 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1490 sequences = re.findall('\(0008,2112\)', i) |
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1491 self.assertEqual(1, len(sequences)) |
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1492 |
|
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1493 # Test returning a non-main DICOM tag, |
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1494 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
|
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1495 # "MEDPC" in "ColorTestImageJ.dcm" |
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1496 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1497 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1498 self.assertEqual(1, len(tags)) |
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1499 |
|
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|
1500 |
|
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1501 def test_incoming_findscu_3(self): |
|
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1502 # This test fails if "LookupMode_DatabaseOnly" or |
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1503 # "LookupMode_DiskOnAnswer" is used, as |
|
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1504 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1505 # tag, as thus a constraint cannot be applied to it |
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1506 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1507 |
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1508 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1509 sequences = re.findall('\(0018,1010\)', i) |
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1510 self.assertEqual(1, len(sequences)) |
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1511 |
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1512 |
| 13 | 1513 def test_incoming_movescu(self): |
| 1514 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1515 |
|
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1516 # No matching patient, so no job is created |
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1517 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1518 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1519 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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1520 |
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1521 # 1 Matching patient, track the job |
| 138 | 1522 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1523 '--patient', | |
| 1524 '-k', '0008,0052=PATIENT', | |
| 1525 '-k', 'PatientID=12345678' | |
| 1526 ]))) | |
| 13 | 1527 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1528 | |
| 1529 | |
| 1530 def test_findscu(self): | |
| 1531 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1532 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1533 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1534 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1535 | |
| 1536 # Test the "find-patient" level | |
| 1537 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1538 self.assertEqual(1, len(p)) | |
| 1539 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1540 | |
| 1541 # Test wildcards constraints. The "LO" value representation | |
| 1542 # for PatientID is always case-sensitive, but the "PN" for | |
| 1543 # PatientName might depend on the implementation: | |
| 1544 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1545 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1546 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1547 self.assertEqual(1, len(p)) | |
| 1548 | |
| 1549 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1550 self.assertEqual(1, len(p)) | |
| 1551 | |
| 1552 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1553 self.assertEqual(1, len(p)) | |
| 1554 | |
| 1555 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1556 self.assertEqual(1, len(p)) | |
| 1557 | |
| 1558 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1559 self.assertEqual(0, len(p)) | |
| 1560 | |
| 1561 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1562 self.assertEqual(0, len(p)) | |
| 1563 | |
| 1564 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1565 self.assertEqual(0, len(p)) | |
| 1566 | |
| 1567 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1568 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1569 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1570 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1571 | |
| 1572 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1573 self.assertEqual(2, len(p)) | |
| 1574 | |
| 1575 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1576 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1577 self.assertEqual(1, len(s)) | |
| 1578 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1579 | |
| 1580 # Test range searches | |
| 1581 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1582 'StudyDate' : '-20070101' }) | |
| 1583 self.assertEqual(0, len(t)) | |
| 1584 | |
| 1585 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1586 'StudyDate' : '20090101-' }) | |
| 1587 self.assertEqual(0, len(t)) | |
| 1588 | |
| 1589 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1590 'StudyDate' : '20070101-' }) | |
| 1591 self.assertEqual(1, len(t)) | |
| 1592 | |
| 1593 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1594 'StudyDate' : '-20090101' }) | |
| 1595 self.assertEqual(1, len(t)) | |
| 1596 | |
| 1597 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1598 'StudyDate' : '20070207-20070207' }) | |
| 1599 self.assertEqual(0, len(t)) | |
| 1600 | |
| 1601 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1602 'StudyDate' : '20070208-20070208' }) | |
| 1603 self.assertEqual(1, len(t)) | |
| 1604 | |
| 1605 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1606 'StudyDate' : '20070209-20070209' }) | |
| 1607 self.assertEqual(0, len(t)) | |
| 1608 | |
| 1609 # Test the ModalitiesInStudy tag | |
| 1610 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1611 'PatientID' : 'B9uTHKOZ', | |
| 1612 'ModalitiesInStudy' : 'US' }) | |
| 1613 self.assertEqual(0, len(t)) | |
| 1614 | |
| 1615 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1616 'PatientID' : 'B9uTHKOZ', | |
| 1617 'ModalitiesInStudy' : 'CT' }) | |
| 1618 self.assertEqual(1, len(t)) | |
| 1619 | |
| 1620 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1621 'PatientID' : 'B9uTHKOZ', | |
| 1622 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1623 self.assertEqual(1, len(t)) | |
| 1624 | |
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1625 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1626 'PatientID' : 'B9uTHKOZ', |
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1627 'ModalitiesInStudy' : '' }) |
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1628 self.assertEqual(1, len(t)) |
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1629 |
| 13 | 1630 # Test the "find-series" level |
| 1631 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1632 'PatientID' : 'B9uTHKOZ', | |
| 1633 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1634 self.assertEqual(1, len(t)) | |
| 1635 | |
| 1636 # Test "\" separator | |
| 1637 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1638 'PatientID' : 'B9uTHKOZ', | |
| 1639 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1640 'Modality' : 'MR\\CT\\US' }) | |
| 1641 self.assertEqual(1, len(t)) | |
| 1642 | |
| 1643 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1644 'PatientID' : 'B9uTHKOZ', | |
| 1645 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1646 'Modality' : 'MR\\US' }) | |
| 1647 self.assertEqual(0, len(t)) | |
| 1648 | |
| 1649 | |
| 1650 def test_update_modalities(self): | |
| 1651 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1652 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1653 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1654 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1655 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1656 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
|
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1657 DoDelete(_REMOTE, '/modalities/tata') |
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1658 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1659 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
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1660 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1661 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1662 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1663 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1664 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1665 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1666 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1667 |
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1668 # New in Orthanc 1.8.1 |
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1669 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1670 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1671 |
| 13 | 1672 DoDelete(_REMOTE, '/modalities/toto') |
| 1673 DoDelete(_REMOTE, '/modalities/tata') | |
| 1674 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1675 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1676 | |
| 1677 | |
| 1678 def test_update_peers(self): | |
| 1679 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1680 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1681 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1682 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1683 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1684 'Username': 'user', | |
| 1685 'Password' : 'pass', | |
| 1686 'RemoteSelf' : 'self' }) | |
| 128 | 1687 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1688 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1689 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1690 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1691 |
| 1692 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1693 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1694 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1695 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1696 else: | |
| 1697 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1698 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1699 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1700 | |
| 128 | 1701 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1702 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1703 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1704 |
| 13 | 1705 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1706 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1707 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1708 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1709 |
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1710 # New in Orthanc 1.8.1 |
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1711 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1712 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1713 |
| 13 | 1714 DoDelete(_REMOTE, '/peers/toto') |
| 1715 DoDelete(_REMOTE, '/peers/tata') | |
| 1716 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1717 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1718 | |
| 1719 | |
| 1720 def test_mesterhazy_modification(self): | |
| 1721 # When I modify a series ( eg. curl | |
| 1722 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1723 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1724 # series is added to a new Study, instead of the existing | |
| 1725 # Study. Fixed in Orthanc 0.7.5 | |
| 1726 | |
| 1727 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1728 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1729 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1730 | |
| 1731 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1732 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1733 | |
| 1734 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1735 | |
| 1736 | |
| 1737 def test_create(self): | |
| 1738 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1739 json.dumps({ | |
| 1740 'PatientName' : 'Jodogne', | |
| 1741 'Modality' : 'CT', | |
| 58 | 1742 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1743 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1744 })) | |
| 1745 | |
| 1746 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1747 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1748 | |
| 1749 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1750 self.assertEqual((5, 5), png.size) | |
| 1751 | |
| 38 | 1752 j = DoGet(_REMOTE, i['Path']) |
| 1753 self.assertEqual('Instance', j['Type']) | |
| 1754 self.assertEqual(j['ID'], i['ID']) | |
| 1755 | |
| 13 | 1756 |
| 1757 def test_pilates(self): | |
| 1758 # "SCU failed error when accessing orthanc with osirix" by | |
| 1759 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1760 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1761 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1762 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1763 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1764 | |
| 1765 | |
| 1766 def test_shared_tags(self): | |
| 1767 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1768 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1769 p = DoGet(_REMOTE, '/patients')[0] | |
| 1770 | |
| 1771 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1772 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1773 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1775 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1776 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1777 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1778 |
| 13 | 1779 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1780 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1781 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1782 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1783 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1784 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1785 | |
| 1786 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1787 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1788 | |
| 1789 | |
| 1790 def test_modules(self): | |
| 1791 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1792 p = DoGet(_REMOTE, '/patients')[0] | |
| 1793 s = DoGet(_REMOTE, '/studies')[0] | |
| 1794 t = DoGet(_REMOTE, '/series')[0] | |
| 1795 | |
| 1796 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1797 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1798 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1799 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1800 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1801 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1802 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1803 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1804 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1805 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1806 | |
| 1807 | |
| 1808 def test_auto_directory(self): | |
| 1809 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1810 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1811 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1812 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1813 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1814 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1815 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1816 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1817 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1818 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1819 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1820 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1821 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1822 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1823 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1824 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1825 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1826 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1827 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1828 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1829 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1830 |
| 1831 | |
| 1832 def test_echo(self): | |
| 1833 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
|
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1834 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1835 |
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1836 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1837 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1838 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1839 |
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1840 # New in Orthanc 1.8.1 |
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1841 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1842 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1843 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1844 |
| 353 | 1845 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1846 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1847 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1848 'AET' : _REMOTE['DicomAet'], | |
| 1849 'Host' : _REMOTE['Server'], | |
| 1850 'Port' : _REMOTE['DicomPort'], | |
| 1851 'CheckFind' : True | |
| 1852 }) | |
| 1853 | |
| 13 | 1854 |
| 1855 def test_xml(self): | |
| 1856 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1857 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1858 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1859 self.assertEqual(len(items), len(json)) | |
| 1860 | |
| 1861 self.assertTrue('dicom-conformance' in json) | |
| 1862 | |
| 1863 ok = False | |
| 1864 for i in items: | |
| 1865 if i.childNodes[0].data == 'dicom-conformance': | |
| 1866 ok = True | |
| 1867 self.assertTrue(ok) | |
| 1868 | |
| 1869 | |
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1870 def test_googlecode_issue_16(self): |
| 13 | 1871 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1872 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1873 self.assertEqual('0018,1063', t) | |
| 1874 | |
| 1875 | |
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1876 def test_googlecode_issue_22(self): |
| 13 | 1877 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1878 a = [ | |
| 1879 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1880 "c69eee9a51eea3e8611e82e578897254", | |
| 1881 "315666be83e2d0111c77bc0996d84901", | |
| 1882 "3e27aa959d911172c48a1436443c72b1", | |
| 1883 "958642c9e7e9d232d3869faff546058c", | |
| 1884 "5e7ea8e3e4230cae707d143481355c59", | |
| 1885 "eda37f83558d858a596175aed8b2ad47", | |
| 1886 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1887 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1888 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1889 "e2f39e85896fe58876654b94cd0b5013", | |
| 1890 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1891 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1892 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1893 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1894 "806b8b3e300c615099c11a5ec23465aa", | |
| 1895 "7c836aa298ba6eef96434579af631a11", | |
| 1896 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1897 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1898 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1899 "44e6670f127e612a2b4aa60a0d207698", | |
| 1900 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1901 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1902 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1903 ] | |
| 1904 | |
| 1905 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1906 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1907 | |
| 1908 for i in range(len(a)): | |
| 1909 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1910 | |
| 1911 | |
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1912 def test_googlecode_issue_19(self): |
|
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1913 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1914 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1915 | |
| 1916 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1917 if not HasGdcmPlugin(_REMOTE): |
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1918 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1919 |
| 1920 | |
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1921 def test_googlecode_issue_37(self): |
| 13 | 1922 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1923 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1924 | |
| 1925 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1926 'CaseSensitive' : True, | |
| 1927 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1928 self.assertEqual(1, len(a)) | |
| 14 | 1929 |
| 1930 | |
| 1931 def test_rest_find(self): | |
| 1932 # Upload 8 instances | |
| 1933 for i in range(2): | |
| 1934 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1935 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1936 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1937 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1938 | |
| 1939 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1940 'CaseSensitive' : False, | |
|
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1941 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1942 self.assertEqual(1, len(a)) |
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1943 |
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1944 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1945 'CaseSensitive' : False, |
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1946 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1947 self.assertEqual(2, len(a)) |
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1948 |
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1949 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1950 'CaseSensitive' : False, |
| 14 | 1951 'Query' : { 'PatientName' : '*n*' }}) |
| 1952 self.assertEqual(2, len(a)) | |
| 1953 | |
| 1954 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1955 'CaseSensitive' : True, | |
| 1956 'Query' : { 'PatientName' : '*n*' }}) | |
| 1957 self.assertEqual(0, len(a)) | |
| 1958 | |
| 1959 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1960 'Level' : 'Patient', | |
| 1961 'CaseSensitive' : False, | |
| 1962 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1963 self.assertEqual(1, len(a)) | |
| 1964 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1965 | |
| 1966 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1967 'CaseSensitive' : True, | |
| 1968 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1969 self.assertEqual(0, len(a)) | |
| 1970 | |
| 1971 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1972 'CaseSensitive' : True, | |
| 1973 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1974 self.assertEqual(1, len(a)) | |
| 1975 | |
| 1976 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1977 'CaseSensitive' : True, | |
| 1978 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1979 self.assertEqual(2, len(a)) | |
| 1980 | |
| 1981 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1982 'CaseSensitive' : True, | |
| 1983 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1984 self.assertEqual(4, len(a)) | |
| 1985 | |
| 1986 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1987 self.assertEqual(2, len(a)) | |
| 1988 | |
| 1989 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1990 self.assertEqual(2, len(a)) | |
| 1991 | |
| 1992 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1993 self.assertEqual(4, len(a)) | |
| 1994 | |
| 1995 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1996 self.assertEqual(8, len(a)) | |
| 1997 | |
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1998 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1999 'Expand' : True, |
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2000 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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2001 self.assertEqual(1, len(a)) |
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2002 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2003 |
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2004 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2005 'Expand' : True, |
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2006 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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2007 self.assertEqual(2, len(a)) |
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2008 for i in range(2): |
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2009 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2010 |
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2011 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2012 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2013 self.assertEqual(0, len(a)) |
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2014 |
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2015 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2016 'Expand' : True, |
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2017 'Query' : { 'StudyDate' : '-20061201' }}) |
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2018 self.assertEqual(1, len(a)) |
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2019 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2020 |
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2021 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2022 'Expand' : True, |
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2023 'Query' : { 'StudyDate' : '-20051201' }}) |
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2024 self.assertEqual(0, len(a)) |
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2025 |
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2026 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2027 'Expand' : True, |
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2028 'Query' : { 'StudyDate' : '20061201-' }}) |
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2029 self.assertEqual(2, len(a)) |
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2030 for i in range(2): |
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2031 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2032 |
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2033 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2034 'Expand' : True, |
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2035 'Query' : { 'StudyDate' : '20061202-' }}) |
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2036 self.assertEqual(1, len(a)) |
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2037 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2038 |
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2039 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2040 'Expand' : True, |
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2041 'Query' : { 'StudyDate' : '20080819-' }}) |
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2042 self.assertEqual(1, len(a)) |
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2043 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2044 |
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2045 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2046 'Expand' : True, |
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2047 'Query' : { 'StudyDate' : '20080820-' }}) |
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2048 self.assertEqual(0, len(a)) |
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2049 |
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2050 |
| 14 | 2051 |
| 2052 def test_rest_query_retrieve(self): | |
| 2053 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2054 | |
| 2055 # Upload 8 instances | |
| 2056 for i in range(2): | |
| 2057 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2058 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2059 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2060 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2061 | |
| 2062 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2063 for p in DoGet(_REMOTE, '/patients'): | |
| 2064 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2065 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2066 | |
| 2067 for q in DoGet(_REMOTE, '/queries'): | |
| 2068 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2069 | |
| 2070 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2071 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
|
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2072 |
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2073 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # TODO: check why this works with 0.8.6 and not with more recent versions |
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2074 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', |
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2075 'Query' : { |
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2076 'PatientName' : '*NE*', |
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2077 'StudyDate' : '*', |
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2078 }})['ID'] |
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2079 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
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2080 |
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2081 b = DoGet(_REMOTE, '/queries/%s' % a) |
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2082 self.assertTrue('answers' in b) |
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2083 self.assertTrue('level' in b) |
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2084 self.assertTrue('modality' in b) |
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2085 self.assertTrue('query' in b) |
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2086 self.assertTrue('retrieve' in b) |
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2087 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) |
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2088 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) |
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2089 |
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2090 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) |
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2091 self.assertEqual(2, len(q)) |
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2092 self.assertTrue('PatientName' in q) |
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2093 self.assertTrue('StudyDate' in q) |
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2094 self.assertEqual('*NE*', q['PatientName']) |
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2095 self.assertEqual('*', q['StudyDate']) |
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2096 |
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2097 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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2098 |
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2099 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) |
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2100 self.assertTrue('content' in s) |
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2101 self.assertTrue('retrieve' in s) |
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2102 |
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2103 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) |
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2104 self.assertEqual('887', s['PatientID']) |
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2105 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) |
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2106 |
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2107 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2108 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') |
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2109 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2110 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2111 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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2112 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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2113 |
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2114 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
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2115 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2116 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2117 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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2118 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
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2119 |
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2120 # New in Orthanc 1.4.3 |
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2121 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2122 self.assertEqual(2, len(s)) |
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2123 for i in range(2): |
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2124 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2125 self.assertEqual('887', s[i]['PatientID']) |
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2126 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2127 |
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2128 DoDelete(_REMOTE, '/queries/%s' % a) |
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2129 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) |
| 14 | 2130 |
| 2131 | |
| 2132 def test_parent(self): | |
| 2133 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2134 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2135 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2136 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2137 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2138 self.assertEqual(instance, u) |
| 14 | 2139 |
| 2140 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2141 self.assertEqual('Patient', a['Type']) | |
| 2142 self.assertEqual(patient, a['ID']) | |
| 2143 | |
| 2144 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2145 self.assertEqual('Patient', a['Type']) | |
| 2146 self.assertEqual(patient, a['ID']) | |
| 2147 | |
| 2148 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2149 self.assertEqual('Study', a['Type']) | |
| 2150 self.assertEqual(study, a['ID']) | |
| 2151 | |
| 2152 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2153 self.assertEqual('Patient', a['Type']) | |
| 2154 self.assertEqual(patient, a['ID']) | |
| 2155 | |
| 2156 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2157 self.assertEqual('Study', a['Type']) | |
| 2158 self.assertEqual(study, a['ID']) | |
| 2159 | |
| 2160 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2161 self.assertEqual('Series', a['Type']) | |
| 2162 self.assertEqual(series, a['ID']) | |
| 2163 | |
| 2164 | |
| 2165 def test_shanon(self): | |
| 2166 def Anonymize(instance, replacements = {}): | |
| 119 | 2167 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2168 'Replace' : replacements, | |
| 2169 'Force' : True, | |
| 2170 }, 'application/json') | |
| 14 | 2171 |
| 2172 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2173 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2174 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2175 | |
| 2176 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2177 ids = [ 'ozp00SjY2xG', | |
| 2178 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2179 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2180 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2181 | |
| 2182 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2183 for i in range(4): | |
| 2184 self.assertNotEqual(ids[i], a[i]) | |
| 2185 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2186 | |
| 2187 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2188 for i in range(4): | |
| 2189 self.assertNotEqual(ids[i], a[i]) | |
| 2190 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2191 | |
| 2192 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2193 self.assertEqual('instance', a[3]) | |
| 2194 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2195 | |
| 2196 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2197 self.assertEqual('series', a[2]) | |
| 2198 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2199 | |
| 2200 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2201 self.assertEqual('study', a[1]) | |
| 2202 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2203 | |
| 2204 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2205 self.assertEqual('patient', a[0]) | |
| 2206 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2207 | |
| 2208 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2209 'StudyInstanceUID' : 'study', | |
| 2210 'SeriesInstanceUID' : 'series', | |
| 2211 'SOPInstanceUID' : 'instance' }), tags) | |
| 2212 self.assertEqual('patient', a[0]) | |
| 2213 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2214 | |
| 2215 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2216 | |
| 2217 | |
| 2218 def test_shanon_2(self): | |
| 2219 def Modify(instance, replacements = {}): | |
| 119 | 2220 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2221 'Replace' : replacements, | |
| 2222 'Force': True, | |
| 2223 }, 'application/json') | |
| 14 | 2224 |
| 2225 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2226 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2227 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2228 | |
| 2229 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2230 ids = [ 'ozp00SjY2xG', | |
| 2231 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2232 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2233 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2234 | |
| 2235 a = ExtractDicomTags(Modify(u), tags) | |
| 2236 self.assertEqual(ids[0], a[0]) | |
| 2237 self.assertEqual(ids[1], a[1]) | |
| 2238 self.assertEqual(ids[2], a[2]) | |
| 2239 self.assertNotEqual(ids[3], a[3]) | |
| 2240 self.assertEqual(0, len(a[4])) | |
| 2241 | |
| 2242 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2243 self.assertEqual(ids[0], a[0]) | |
| 2244 self.assertEqual(ids[1], a[1]) | |
| 2245 self.assertEqual(ids[2], a[2]) | |
| 2246 self.assertEqual('instance', a[3]) | |
| 2247 | |
| 2248 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2249 self.assertEqual(ids[0], a[0]) | |
| 2250 self.assertEqual(ids[1], a[1]) | |
| 2251 self.assertEqual('series', a[2]) | |
| 2252 self.assertNotEqual(ids[3], a[3]) | |
| 2253 | |
| 2254 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2255 self.assertEqual(ids[0], a[0]) | |
| 2256 self.assertEqual('study', a[1]) | |
| 2257 self.assertNotEqual(ids[2], a[2]) | |
| 2258 self.assertNotEqual(ids[3], a[3]) | |
| 2259 | |
| 2260 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2261 self.assertEqual('patient', a[0]) | |
| 2262 self.assertNotEqual(ids[1], a[1]) | |
| 2263 self.assertNotEqual(ids[2], a[2]) | |
| 2264 self.assertNotEqual(ids[3], a[3]) | |
| 2265 | |
| 2266 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2267 'StudyInstanceUID' : 'study', | |
| 2268 'SeriesInstanceUID' : 'series', | |
| 2269 'SOPInstanceUID' : 'instance' }), tags) | |
| 2270 self.assertEqual('patient', a[0]) | |
| 2271 self.assertEqual('study', a[1]) | |
| 2272 self.assertEqual('series', a[2]) | |
| 2273 self.assertEqual('instance', a[3]) | |
| 2274 | |
| 2275 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2276 | |
| 2277 | |
| 2278 def test_instances_tags(self): | |
| 2279 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2280 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2281 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2282 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2283 | |
| 2284 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2285 self.assertEqual(2, len(i)) | |
| 2286 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2287 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2288 | |
| 2289 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2290 self.assertEqual(2, len(i)) | |
| 2291 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2292 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2293 | |
| 2294 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2295 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2296 self.assertEqual(1, len(i)) | |
| 2297 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2298 | |
| 2299 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2300 self.assertEqual(1, len(i)) | |
| 2301 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2302 | |
|
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diff
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|
2303 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
|
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diff
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|
2304 self.assertEqual(1, len(i)) |
|
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diff
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|
2305 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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|
2306 |
| 14 | 2307 |
| 2308 def test_lookup(self): | |
| 2309 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2310 self.assertEqual(0, len(a)) | |
| 2311 | |
| 2312 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2313 | |
| 2314 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2315 self.assertEqual(1, len(a)) | |
| 2316 self.assertEqual('Patient', a[0]['Type']) | |
| 2317 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2318 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2319 | |
| 2320 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2321 self.assertEqual(1, len(a)) | |
| 2322 self.assertEqual('Study', a[0]['Type']) | |
| 2323 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2324 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2325 | |
| 2326 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2327 self.assertEqual(1, len(a)) | |
| 2328 self.assertEqual('Series', a[0]['Type']) | |
| 2329 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2330 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2331 | |
| 2332 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2333 self.assertEqual(1, len(a)) | |
| 2334 self.assertEqual('Instance', a[0]['Type']) | |
| 2335 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2336 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2337 | |
| 2338 DropOrthanc(_REMOTE) | |
| 2339 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2340 self.assertEqual(0, len(a)) | |
| 2341 | |
| 15 | 2342 |
| 2343 def test_autorouting(self): | |
| 2344 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2345 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2346 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2347 | |
| 2348 # Check that this version is >= 0.8.0 | |
| 2349 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2350 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2351 | |
| 2352 UploadInstance(_REMOTE, knee1) | |
| 2353 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2354 | |
| 2355 DropOrthanc(_REMOTE) | |
| 2356 DropOrthanc(_LOCAL) | |
| 174 | 2357 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2358 UploadInstance(_REMOTE, knee1) |
| 2359 UploadInstance(_REMOTE, knee2) | |
| 2360 UploadInstance(_REMOTE, other) | |
| 2361 WaitEmpty(_REMOTE) | |
| 174 | 2362 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2363 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2364 | |
| 2365 DropOrthanc(_REMOTE) | |
| 2366 DropOrthanc(_LOCAL) | |
| 174 | 2367 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2368 UploadInstance(_REMOTE, knee1) |
| 2369 UploadInstance(_REMOTE, knee2) | |
| 2370 UploadInstance(_REMOTE, other) | |
| 2371 WaitEmpty(_REMOTE) | |
| 174 | 2372 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2373 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2374 | |
| 2375 DropOrthanc(_REMOTE) | |
| 2376 DropOrthanc(_LOCAL) | |
| 174 | 2377 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2378 UploadInstance(_REMOTE, knee1) |
| 2379 WaitEmpty(_REMOTE) | |
| 174 | 2380 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2381 i = DoGet(_LOCAL, '/instances') |
| 2382 self.assertEqual(1, len(i)) | |
| 2383 | |
| 2384 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2385 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2386 f.flush() | |
| 45 | 2387 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2388 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2389 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2390 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2391 |
| 2392 | |
| 2393 def test_storescu_rf(self): | |
| 2394 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2395 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2396 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2397 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2398 |
| 2399 | |
| 2400 def test_anonymize_instance(self): | |
| 2401 def AnonymizeAndUpload(instanceId, parameters): | |
| 2402 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2403 'application/json'), 'application/dicom')['ID'] | |
| 2404 | |
| 2405 def ModifyAndUpload(instanceId, parameters): | |
| 2406 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2407 'application/json'), 'application/dicom')['ID'] | |
| 2408 | |
| 2409 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2410 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2411 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2412 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2413 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2414 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2415 | |
| 2416 b = AnonymizeAndUpload(a, '{}') | |
| 2417 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2418 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2419 | |
| 2420 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2421 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2422 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2423 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2424 | |
| 2425 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2426 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2427 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2428 | |
| 2429 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2430 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2431 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2432 | |
| 2433 # Examples from the Wiki | |
|
118
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test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2434 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2435 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2436 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2437 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2438 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2439 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2440 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2441 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2442 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2443 | |
|
118
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test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2444 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2445 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2446 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2447 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2448 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2449 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2450 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2451 | |
|
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test_bitbucket_issue_55
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parents:
117
diff
changeset
|
2452 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2453 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2454 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2455 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2456 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2457 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2458 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2459 | |
| 2460 | |
| 2461 # Test modify non-existing | |
| 2462 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2463 json.dumps({ | |
| 2464 'PatientName' : 'Jodogne', | |
| 2465 'Modality' : 'CT', | |
| 2466 }))['ID'] | |
| 2467 | |
| 2468 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2469 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2470 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2471 | |
| 2472 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2473 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2474 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2475 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2476 | |
|
21
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tests of image decoding
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18
diff
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|
2477 |
|
2a29bcff60a7
tests of image decoding
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18
diff
changeset
|
2478 def test_incoming_jpeg(self): |
|
463
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diff
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|
2479 # since this test fails regularly on CI, enable verbosity |
|
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diff
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|
2480 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
|
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|
2481 |
|
468
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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diff
changeset
|
2482 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
61
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test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2483 if acceptUnknownSopClassUid: |
|
967d44407308
test UnknownSopClassAccepted option
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60
diff
changeset
|
2484 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
|
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test UnknownSopClassAccepted option
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|
2485 else: |
|
967d44407308
test UnknownSopClassAccepted option
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parents:
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diff
changeset
|
2486 tmp = [ '-xs' ] |
|
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test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2487 |
|
468
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diff
changeset
|
2488 while retries > 0: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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parents:
465
diff
changeset
|
2489 retries -= 1 |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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diff
changeset
|
2490 with open(os.devnull, 'w') as FNULL: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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parents:
465
diff
changeset
|
2491 try: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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465
diff
changeset
|
2492 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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465
diff
changeset
|
2493 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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Alain Mazy <am@osimis.io>
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changeset
|
2494 GetDatabasePath(image) ], |
|
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diff
changeset
|
2495 stderr = FNULL) |
|
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diff
changeset
|
2496 |
|
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diff
changeset
|
2497 if expectSuccess: |
|
e1867aeb57e2
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465
diff
changeset
|
2498 return |
|
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retries storescu if it succeeds while it should fail
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diff
changeset
|
2499 except subprocess.CalledProcessError as e: |
|
e1867aeb57e2
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diff
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|
2500 print('storescu failed with error code: %s' % str(e.returncode)) |
|
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diff
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|
2501 if not expectSuccess: |
|
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diff
changeset
|
2502 raise e |
|
21
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18
diff
changeset
|
2503 |
|
2a29bcff60a7
tests of image decoding
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diff
changeset
|
2504 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
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|
2505 |
|
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|
2506 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
|
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|
2507 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
|
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changeset
|
2508 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
|
f673153f27a4
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|
2509 ]) |
|
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|
2510 self.assertTrue('1.2.840.10008.1.2' in a) |
|
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|
2511 self.assertTrue('1.2.840.10008.1.2.1' in a) |
|
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|
2512 self.assertTrue('1.2.840.10008.1.2.2' in a) |
|
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changeset
|
2513 self.assertEqual(3, len(a)) |
|
f673153f27a4
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|
2514 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
|
f673153f27a4
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|
2515 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
|
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changeset
|
2516 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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diff
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|
2517 else: |
|
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changeset
|
2518 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
|
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changeset
|
2519 |
| 490 | 2520 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
|
468
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retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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diff
changeset
|
2521 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
|
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retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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465
diff
changeset
|
2522 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
21
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tests of image decoding
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18
diff
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|
2523 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
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|
2524 |
|
f673153f27a4
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diff
changeset
|
2525 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2526 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
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diff
changeset
|
2527 self.assertGreaterEqual(42, len(a)) |
|
f673153f27a4
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2528 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
f673153f27a4
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diff
changeset
|
2529 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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changeset
|
2530 else: |
|
f673153f27a4
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diff
changeset
|
2531 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
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diff
changeset
|
2532 |
|
62
f9c4ce95756f
removal of useless information
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61
diff
changeset
|
2533 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2534 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2535 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2536 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
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18
diff
changeset
|
2537 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2538 # set back normal verbosity |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2539 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
21
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parents:
18
diff
changeset
|
2540 |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2541 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
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18
diff
changeset
|
2543 |
|
2a29bcff60a7
tests of image decoding
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18
diff
changeset
|
2544 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2545 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2546 | |
| 2547 # This is JPEG lossless | |
|
136
5634ef96fcc5
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133
diff
changeset
|
2548 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2549 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
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diff
changeset
|
2550 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2551 |
|
21
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18
diff
changeset
|
2552 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2553 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2555 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2556 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2557 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
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18
diff
changeset
|
2559 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 |
|
2a29bcff60a7
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18
diff
changeset
|
2561 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2562 |
|
2a29bcff60a7
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18
diff
changeset
|
2563 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
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18
diff
changeset
|
2564 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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18
diff
changeset
|
2565 |
|
2a29bcff60a7
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18
diff
changeset
|
2566 |
|
2a29bcff60a7
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18
diff
changeset
|
2567 def test_pixel_data(self): |
|
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18
diff
changeset
|
2568 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
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diff
changeset
|
2569 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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18
diff
changeset
|
2570 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
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diff
changeset
|
2571 |
|
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18
diff
changeset
|
2572 phenixSize = 358 * 512 * 2 |
|
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18
diff
changeset
|
2573 colorSize = 1000 * 1000 * 3 |
|
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18
diff
changeset
|
2574 jpegSize = 51918 |
|
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diff
changeset
|
2575 |
|
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diff
changeset
|
2576 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
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diff
changeset
|
2577 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
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diff
changeset
|
2578 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
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diff
changeset
|
2579 |
|
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diff
changeset
|
2580 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
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diff
changeset
|
2581 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
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diff
changeset
|
2582 |
|
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diff
changeset
|
2583 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
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diff
changeset
|
2584 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
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diff
changeset
|
2585 |
|
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diff
changeset
|
2586 |
|
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18
diff
changeset
|
2587 def test_decode_brainix(self): |
|
2a29bcff60a7
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18
diff
changeset
|
2588 brainix = [ |
|
2a29bcff60a7
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diff
changeset
|
2589 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2590 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
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diff
changeset
|
2591 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
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diff
changeset
|
2592 ] |
|
2a29bcff60a7
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18
diff
changeset
|
2593 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2594 maxValue = 426.0 |
|
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18
diff
changeset
|
2595 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2618 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2619 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2620 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2621 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2622 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2623 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2624 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2625 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2626 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2627 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2628 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2629 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2630 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2631 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2632 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2633 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2634 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2635 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2636 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2637 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2638 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2639 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2640 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2641 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2642 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2643 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2644 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2645 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2646 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2647 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2648 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2649 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2650 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2651 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2652 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2653 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2654 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2655 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2656 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2657 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2658 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2659 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2660 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2661 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2662 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2663 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2664 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2665 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2666 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2667 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2668 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2669 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2670 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2671 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2672 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2673 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2674 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2675 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2676 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2677 |
| 2678 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2679 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2680 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2681 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2682 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2683 |
| 22 | 2684 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2685 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2686 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2687 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2688 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2689 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2690 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2691 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2692 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2693 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2694 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2695 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2696 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2697 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2698 |
| 22 | 2699 def test_encodings(self): |
| 23 | 2700 # Latin-1 (ISO_IR 100) |
| 22 | 2701 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2702 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2703 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2704 |
| 2705 # Latin-2 (ISO_IR 101) | |
| 2706 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2707 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2708 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2709 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2710 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2711 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2712 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2713 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2714 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
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2715 # setting of the local AET during C-Store SCU (both in Lua and |
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2716 # in the REST API)." |
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2717 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
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2718 |
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2719 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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2720 |
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2721 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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2722 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
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2723 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
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2724 |
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2725 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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2726 'LocalAet' : 'YOP', |
|
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2727 'Resources' : [ a['ID'], b['ID'] ] |
|
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|
2728 }) |
|
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|
2729 |
|
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|
2730 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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2731 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
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2732 |
|
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2733 DropOrthanc(_LOCAL) |
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2734 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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2735 |
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2736 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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|
2737 'Resources' : [ c['ID'] ] |
|
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2738 }) |
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|
2739 |
|
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test_storescu_custom_aet
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|
2740 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
2741 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
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|
2742 |
|
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2743 DropOrthanc(_REMOTE) |
|
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|
2744 DropOrthanc(_LOCAL) |
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2745 |
| 174 | 2746 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
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2747 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
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2748 |
|
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2749 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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2750 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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2751 WaitEmpty(_REMOTE) |
|
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2752 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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2753 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
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2754 |
|
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2755 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
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2756 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
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2757 WaitEmpty(_REMOTE) |
|
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2758 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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2759 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
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2760 |
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2761 def test_resources_since_limit(self): |
|
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2762 # Upload 16 instances |
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2763 for i in range(4): |
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2764 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
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2765 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
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2766 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
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2767 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
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2768 |
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2769 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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2770 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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2771 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
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2772 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
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2773 |
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2774 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
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2775 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
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2776 |
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2777 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
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2778 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
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2779 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
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2780 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
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|
2781 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
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2782 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
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2783 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
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2784 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
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2785 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
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2786 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
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2787 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
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2788 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
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2789 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
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2790 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
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2791 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
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2792 |
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2793 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
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2794 s = {} |
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2795 since = 0 |
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2796 while True: |
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2797 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
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2798 if len(t) == 0: |
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diff
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|
2799 break |
|
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2800 |
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2801 since += len(t) |
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2802 for i in t: |
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2803 s[i] = None |
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2804 |
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2805 self.assertEqual(16, len(s)) |
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2806 for instance in DoGet(_REMOTE, '/instances'): |
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|
2807 self.assertTrue(instance in s) |
| 36 | 2808 |
| 2809 | |
| 2810 def test_create_pdf(self): | |
| 2811 # Upload 4 instances | |
| 2812 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2813 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2814 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2815 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2816 | |
| 2817 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2818 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2819 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2820 | |
| 2821 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2822 pdf = f.read() | |
| 2823 | |
| 2824 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2825 json.dumps({ | |
| 2826 'Tags' : { | |
| 2827 'PatientName' : 'Jodogne', | |
| 2828 'Modality' : 'CT', | |
| 2829 }, | |
| 2830 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2831 })) | |
| 2832 | |
| 2833 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2834 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2835 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2836 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 2837 |
| 2838 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2839 self.assertEqual(len(b), len(pdf) + 1) | |
| 2840 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2841 | |
| 2842 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2843 json.dumps({ | |
| 2844 'Parent' : brainixPatient, | |
| 2845 'Tags' : { | |
| 2846 'PatientName' : 'Jodogne', | |
| 2847 } | |
| 2848 }))) | |
| 2849 | |
| 2850 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2851 json.dumps({ | |
| 2852 'Parent' : brainixPatient, | |
| 2853 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2854 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2855 })) | |
| 2856 | |
| 2857 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2858 | |
| 2859 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2860 json.dumps({ | |
| 2861 'Parent' : brainixStudy, | |
| 2862 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2863 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2864 })) | |
| 2865 | |
| 2866 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2867 | |
| 2868 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2869 json.dumps({ | |
| 2870 'Parent' : brainixEpi, | |
| 37 | 2871 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2872 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2873 })) | |
| 2874 | |
| 2875 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2876 | |
| 2877 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2878 self.assertEqual(len(b), len(pdf)) | |
| 2879 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2880 | |
| 2881 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2882 |
| 2883 | |
| 2884 def test_create_series(self): | |
| 2885 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2886 json.dumps({ | |
| 2887 'Tags' : { | |
| 40 | 2888 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2889 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2890 'Modality' : 'CT', |
| 2891 }, | |
| 2892 'Content' : [ | |
| 40 | 2893 { |
| 2894 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2895 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2896 }, | |
| 38 | 2897 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2898 ] | |
| 2899 })) | |
| 2900 | |
| 2901 s = DoGet(_REMOTE, i['Path']) | |
| 2902 self.assertEqual('Series', s['Type']) | |
| 2903 self.assertEqual(s['ID'], i['ID']) | |
| 2904 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2905 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2906 self.assertEqual('Complete', s['Status']) | |
| 40 | 2907 |
| 2908 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2909 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2910 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2911 if 'ImageComments' in a: | |
| 2912 self.assertEqual('Tutu', a['ImageComments']) | |
| 2913 else: | |
| 2914 self.assertEqual('Tutu', b['ImageComments']) | |
| 2915 | |
| 2916 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2917 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2918 'Sébastien Jodogne') | |
| 47 | 2919 |
| 2920 | |
| 2921 def test_create_binary(self): | |
| 2922 binary = ''.join(map(chr, range(256))) | |
| 2923 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2924 tags = { | |
| 2925 'PatientName' : 'Jodogne', | |
| 2926 '8899-8899' : encoded | |
| 2927 } | |
| 2928 | |
| 2929 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2930 json.dumps({ | |
| 266 | 2931 'Tags' : tags, |
| 2932 'PrivateCreator' : 'TestBinary', | |
| 47 | 2933 })) |
| 2934 | |
| 2935 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2936 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2937 | |
| 2938 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2939 json.dumps({ | |
| 2940 'InterpretBinaryTags' : False, | |
| 266 | 2941 'Tags' : tags, |
| 2942 'PrivateCreator' : 'TestBinary', | |
| 47 | 2943 })) |
| 2944 | |
| 2945 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2946 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2947 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2948 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2949 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2950 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2951 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2952 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2953 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2954 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2955 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2956 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2957 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2958 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2959 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2960 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2961 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2962 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2963 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2964 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2965 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2966 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2967 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2968 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2969 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2970 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2971 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2972 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2973 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2974 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2975 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2976 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2977 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2978 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2979 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2980 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2981 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2982 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2983 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2984 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2985 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2986 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2987 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2988 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2989 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2990 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2991 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2992 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2993 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2994 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2995 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2996 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2997 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2998 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2999 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3000 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3001 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3002 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3003 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3004 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3005 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3006 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3007 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3008 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3009 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3010 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3011 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
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|
3012 |
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|
3013 |
|
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|
3014 def test_create_sequence(self): |
|
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|
3015 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
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|
3016 json.dumps({ |
|
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|
3017 'Tags' : { |
|
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|
3018 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
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|
3019 'PatientName': 'Jodogne^', |
|
51
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diff
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|
3020 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
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|
3021 } |
|
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|
3022 }))['ID'] |
|
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|
3023 |
|
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|
3024 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
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|
3025 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
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|
3026 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
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|
3027 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
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|
3028 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
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|
3029 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
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|
3030 |
|
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|
3031 |
|
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changeset
|
3032 def test_modify_sequence(self): |
|
264a20a0276d
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|
3033 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
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|
3034 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
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|
3035 |
|
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|
3036 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
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|
3037 json.dumps({ |
|
264a20a0276d
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|
3038 "Replace" : { |
|
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|
3039 "PatientName" : "hello", |
|
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|
3040 'ReferencedStudySequence': GenerateTestSequence(), |
|
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|
3041 }, |
|
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|
3042 }), |
|
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|
3043 'application/json') |
|
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|
3044 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
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|
3045 DoDelete(_REMOTE, '/instances/%s' % i) |
|
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|
3046 |
| 52 | 3047 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3048 | |
| 3049 | |
| 3050 def test_compression(self): | |
| 3051 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3052 | |
|
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3053 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
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3054 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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3055 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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3056 self.assertEqual(1, len(aa)) |
|
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|
3057 self.assertTrue('dicom' in aa) |
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|
3058 else: |
|
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|
3059 self.assertEqual(2, len(aa)) |
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|
3060 self.assertTrue('dicom' in aa) |
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|
3061 self.assertTrue('dicom-as-json' in aa) |
|
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|
3062 |
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|
3063 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
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|
3064 |
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|
3065 # If "StorageCompression" is enabled in the Orthanc to be |
|
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|
3066 # tested, uncompress the attachment before running the test |
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|
3067 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
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|
3068 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3069 |
|
380
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|
3070 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
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|
3071 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
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|
3072 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
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|
3073 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
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|
3074 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3075 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3076 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3077 |
|
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|
3078 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3079 self.assertTrue('compress' in ops) |
| 3080 self.assertTrue('uncompress' in ops) | |
| 3081 self.assertTrue('is-compressed' in ops) | |
|
380
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|
3082 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3083 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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|
3084 |
|
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|
3085 # Re-compress the attachment |
|
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|
3086 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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|
3087 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3088 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3089 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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|
3090 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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|
3091 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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|
3092 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3093 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3094 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3095 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3096 |
|
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|
3097 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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|
3098 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3099 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
3100 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3101 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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|
3102 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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|
3103 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3104 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
3105 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3106 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3107 |
| 3108 | |
| 3109 def test_ordered_slices(self): | |
| 3110 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3111 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3112 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3113 self.assertEqual('Sequence', o['Type']) | |
| 3114 self.assertEqual(1, len(o['Dicom'])) | |
| 3115 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3116 self.assertEqual(76, len(o['Slices'])) | |
| 3117 for j in range(76): | |
| 3118 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3119 | |
| 68 | 3120 self.assertEqual(1, len(o['SlicesShort'])) |
| 3121 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3122 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3123 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3124 | |
| 53 | 3125 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3126 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3127 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3128 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3129 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3130 | |
| 3131 self.assertEqual('Volume', o['Type']) | |
| 3132 self.assertEqual(3, len(o['Dicom'])) | |
| 3133 self.assertEqual(3, len(o['Slices'])) | |
| 3134 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3135 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3136 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3137 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3138 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3139 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3140 | |
| 68 | 3141 self.assertEqual(3, len(o['SlicesShort'])) |
| 3142 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3143 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3144 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3145 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3146 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3147 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3148 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3149 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3150 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3151 | |
| 53 | 3152 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3153 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3154 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3155 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3156 | |
| 3157 self.assertEqual('Sequence', o['Type']) | |
| 3158 self.assertEqual(2, len(o['Dicom'])) | |
| 3159 self.assertEqual(2, len(o['Slices'])) | |
| 3160 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3161 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3162 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3163 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3164 |
| 68 | 3165 self.assertEqual(2, len(o['SlicesShort'])) |
| 3166 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3167 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3168 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3169 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3170 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3171 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3172 | |
| 3173 | |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3174 |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3175 def test_incoming_movescu_accession(self): |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3176 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3177 |
|
137
412d5f70447e
testing asynchronous c-move
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parents:
136
diff
changeset
|
3178 # No matching patient, so no job is created |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3179 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3180 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3181 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3182 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3183 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
137
412d5f70447e
testing asynchronous c-move
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parents:
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diff
changeset
|
3184 |
|
412d5f70447e
testing asynchronous c-move
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parents:
136
diff
changeset
|
3185 # 1 Matching patient, track the job |
| 138 | 3186 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3187 '--study', | |
| 3188 '-k', '0008,0052=STUDY', | |
| 3189 '-k', 'AccessionNumber=A10003245599' | |
| 3190 ]))) | |
|
137
412d5f70447e
testing asynchronous c-move
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parents:
136
diff
changeset
|
3191 |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3192 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3193 |
| 55 | 3194 |
| 3195 def test_dicom_to_json(self): | |
| 3196 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3197 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3198 |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3199 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3200 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3201 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3202 # Tags for compatibility with DCMTK 3.6.0 |
| 3203 'RETIRED_OtherPatientIDs', | |
| 3204 'OtherPatientIDs', | |
| 3205 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
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parents:
79
diff
changeset
|
3206 ])) |
| 55 | 3207 |
| 3208 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3209 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3210 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3211 ])) |
| 55 | 3212 |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3213 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3214 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3215 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3216 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3217 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3218 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3219 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
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parents:
369
diff
changeset
|
3220 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3221 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3222 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3223 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3224 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3225 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3226 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3227 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3228 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3229 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3230 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3231 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3232 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3233 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3234 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3235 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3236 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3237 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3238 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3239 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3240 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3241 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
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parents:
64
diff
changeset
|
3242 self.assertEqual(aa, tt) |
| 57 | 3243 |
| 3244 | |
| 3245 def test_batch_archive(self): | |
| 3246 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3247 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3248 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3249 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3250 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3251 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3252 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3253 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3254 | |
| 3255 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3256 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3257 self.assertEqual(0, len(z.namelist())) | |
| 3258 | |
| 3259 # One patient | |
| 3260 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3261 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3262 self.assertEqual(4, len(z.namelist())) | |
| 3263 | |
| 3264 # One patient + twice its study + one series from other patient | |
| 3265 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3266 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3267 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3268 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3269 ]) | |
| 3270 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3271 self.assertEqual(6, len(z.namelist())) | |
| 3272 | |
| 3273 # One patient + one series + one instance | |
| 3274 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3275 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3276 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3277 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3278 ]) | |
| 3279 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3280 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3281 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3282 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3283 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3284 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3285 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3286 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3287 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3288 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3289 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3290 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3291 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3292 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3293 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3294 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3295 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3296 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3297 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3298 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3299 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3300 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3301 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3302 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3303 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3304 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3305 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3306 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3307 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3308 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3309 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3310 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3311 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3312 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3313 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3314 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3315 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3316 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3317 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3318 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3319 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3320 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3321 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3322 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3323 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3324 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3325 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3326 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3327 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3328 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3329 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3330 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3331 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3332 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3333 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3334 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3335 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3336 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3337 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3338 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3339 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3340 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3341 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3342 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3343 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3344 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3345 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3346 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3347 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3348 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3349 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3350 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3351 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3352 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3353 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3354 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3355 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3356 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3357 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3358 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3359 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3360 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3361 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3362 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3363 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3364 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3365 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3366 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3367 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3368 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3369 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3370 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3371 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3372 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3373 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3374 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3375 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3376 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3377 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3378 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3379 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3380 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3381 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3382 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3383 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3384 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3385 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3386 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3387 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3388 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3389 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3390 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3391 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3392 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3393 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3394 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3395 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3396 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3397 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
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3398 self.assertTrue('PT' in t) |
|
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3399 self.assertTrue('CT' in t) |
|
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3400 |
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3401 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
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3402 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
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3403 self.assertEqual(1, len(s)) |
|
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3404 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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3405 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
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3406 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
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3407 |
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3408 |
|
78
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|
3409 def test_decode_transfer_syntax(self): |
|
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3410 def Check(t, md5): |
|
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3411 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
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3412 |
|
89
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|
3413 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
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3414 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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3415 self.assertEqual(t, transferSyntax) |
|
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3416 |
|
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3417 if md5 == None: |
|
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|
3418 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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3419 else: |
|
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3420 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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3421 self.assertEqual(m, md5) |
|
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3422 |
|
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|
3423 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
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|
3424 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
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3425 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
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|
3426 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
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|
3427 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3428 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3429 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3430 | |
| 3431 # The 3 checks below don't work on big-endian | |
| 3432 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
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|
3433 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
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|
3434 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
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|
3435 |
|
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|
3436 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3437 if not HasGdcmPlugin(_REMOTE): |
|
299
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|
3438 Check('1.2.840.10008.1.2.4.90', None) |
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|
3439 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3440 |
| 3441 | |
| 3442 def test_raw_frame(self): | |
| 3443 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3444 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3445 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3446 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3447 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3448 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3449 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3450 | |
| 3451 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3452 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3453 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3454 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3455 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3456 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3457 self.assertEqual("L", im.mode) | |
| 3458 self.assertEqual(512, im.size[0]) | |
| 3459 self.assertEqual(512, im.size[1]) | |
| 3460 | |
| 3461 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3462 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3463 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3464 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3465 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3466 self.assertEqual(69214, len(a)) | |
| 3467 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3468 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3469 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3470 self.assertEqual("RGB", im.mode) | |
| 3471 self.assertEqual(512, im.size[0]) | |
| 3472 self.assertEqual(512, im.size[1]) | |
| 323 | 3473 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3474 self.assertEqual("RGB", im.mode) |
| 3475 self.assertEqual(512, im.size[0]) | |
| 3476 self.assertEqual(512, im.size[1]) | |
| 81 | 3477 |
| 3478 | |
| 3479 | |
| 3480 def test_rest_movescu(self): | |
| 3481 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3482 | |
| 3483 # Upload 4 instances | |
| 3484 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3485 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3486 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3487 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3488 | |
| 3489 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3490 for p in DoGet(_REMOTE, '/patients'): | |
| 3491 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3492 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3493 | |
| 3494 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3495 | |
|
482
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|
3496 # Move instance Brainix/Flair/IM-0001-0001.dcm |
|
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|
3497 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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|
3498 'Level' : 'Instance', |
|
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diff
changeset
|
3499 'Resources' : [ |
|
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diff
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|
3500 { |
|
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|
3501 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3502 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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|
3503 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3504 } |
|
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|
3505 ]}) |
|
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|
3506 |
|
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|
3507 # Move series Brainix/Flair/* |
| 81 | 3508 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 3509 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3510 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3511 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3512 | |
|
482
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|
3513 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
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|
3514 # Reset and test asynchronous C-Move at instance level |
|
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|
3515 for p in DoGet(_REMOTE, '/patients'): |
|
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|
3516 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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|
3517 |
|
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|
3518 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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|
3519 'Level' : 'Instance', |
|
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|
3520 'Resources' : [ |
|
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|
3521 { |
|
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|
3522 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3523 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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|
3524 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3525 } |
|
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|
3526 ], |
|
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|
3527 'Asynchronous': True |
|
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|
3528 }) |
|
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|
3529 |
|
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|
3530 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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|
3531 (_REMOTE, '/modalities/orthanctest/move', { |
|
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|
3532 'Level' : 'Instance', |
|
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|
3533 'Resources' : [ |
|
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|
3534 { |
|
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|
3535 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3536 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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|
3537 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3538 } |
|
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|
3539 ], |
|
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|
3540 'Asynchronous': True |
|
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|
3541 })) |
|
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|
3542 |
|
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|
3543 self.assertNotEqual(None, job) |
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|
3544 |
|
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|
3545 # check the job was successfull |
|
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|
3546 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
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|
3547 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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|
3548 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
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|
3549 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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changeset
|
3550 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3551 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3552 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3553 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3554 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3555 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3556 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3557 # Reset and test synchronous C-Move at series level |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3558 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3559 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3560 |
| 81 | 3561 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3562 'Resources' : [ | |
| 3563 { | |
| 3564 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3565 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3566 } | |
| 3567 ]}) | |
| 3568 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3569 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3570 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3571 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3572 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3573 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3574 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3575 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3576 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3577 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3578 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3579 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3580 'Level' : 'Series', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3581 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3582 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3583 'PatientID' : '5Yp0E', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3584 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3585 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3586 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3587 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3588 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3589 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3590 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3591 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3592 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3593 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3594 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3595 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3596 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3597 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3598 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3599 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3600 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3601 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3602 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3603 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3604 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3605 # Move series Brainix/Epi/* |
| 81 | 3606 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3607 'Resources' : [ | |
| 3608 { | |
| 3609 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3610 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3611 } | |
| 3612 ]}) | |
| 3613 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3614 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3615 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3616 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3617 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3618 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3619 # Move study Knee asynchronously |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3620 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3621 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3622 'Level' : 'Study', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3623 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3624 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3625 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3626 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3627 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3628 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3629 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3630 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3631 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3632 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3633 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3634 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3635 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3636 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3637 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3638 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3639 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3640 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3641 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
| 81 | 3642 |
| 3643 # Reset | |
| 3644 for p in DoGet(_REMOTE, '/patients'): | |
| 3645 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3646 | |
| 3647 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3648 | |
| 3649 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3650 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3651 # Move all at once asynchronously at PatientLevel |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3652 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3653 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3654 'Level' : 'Patient', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3655 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3656 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3657 'PatientID' : '5Yp0E', |
| 81 | 3658 }, |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3659 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3660 'PatientID': '887', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3661 'PatientName' : 'KNEE', |
| 81 | 3662 } |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3663 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3664 'Synchronous': False |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3665 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3666 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3667 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3668 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3669 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3670 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
| 81 | 3671 |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3672 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3673 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3674 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3675 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3676 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3677 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3678 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3679 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3680 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3681 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3682 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3683 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3684 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3685 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3686 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3687 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3688 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3689 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3690 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3691 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3692 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3693 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3694 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3695 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3696 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3697 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3698 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3699 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3700 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3701 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3702 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3703 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3704 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3705 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3706 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3707 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3708 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3709 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3710 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3711 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3712 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3713 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3714 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3715 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3716 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3717 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3718 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3719 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3720 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3721 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3722 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3723 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3724 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3725 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3726 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3727 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3728 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3729 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3730 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3731 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3732 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3733 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3734 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3735 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3736 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3737 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3738 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3739 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3740 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3741 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3742 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3743 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3744 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3745 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3746 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3747 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3748 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3749 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3750 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3751 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3752 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3753 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3754 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3755 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3756 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3757 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3758 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3759 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3760 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3761 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3762 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3763 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3764 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3765 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3766 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3767 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3768 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3769 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3770 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3771 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3772 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3773 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3774 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3775 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3776 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3777 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3778 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3779 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3780 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3781 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3782 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3783 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3784 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3785 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3786 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3787 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3788 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3789 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3790 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3791 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3792 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3793 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3794 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3795 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3796 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3797 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3798 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3799 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3800 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3801 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3802 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3803 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3804 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3805 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3806 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3807 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3808 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3809 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3810 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3811 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3812 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3813 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3814 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3815 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3816 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3817 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3818 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3819 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3820 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3821 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3822 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3823 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3824 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3825 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3826 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3827 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3828 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3829 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3830 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3831 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3832 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3833 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3834 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3835 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3836 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3837 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3838 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3839 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3840 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3841 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3842 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3843 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3844 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3845 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3846 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3847 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3848 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3849 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3850 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3851 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3852 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3853 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3854 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3855 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3856 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3857 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3858 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3859 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3860 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3861 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3862 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3863 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3864 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3865 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3866 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3867 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3868 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3869 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3870 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3871 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3872 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3873 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3874 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3875 }, |
| 119 | 3876 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3877 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3878 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3879 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3880 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3881 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3882 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3883 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3884 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3885 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3886 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3887 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3888 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3889 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3890 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3891 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3892 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3893 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3894 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3895 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3896 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3897 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3898 # metadata before reconstruct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3899 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3900 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3901 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3902 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3903 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3904 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3905 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3906 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3907 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3908 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3909 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3910 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3911 # metadata after reconstruct should have been preserved |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3912 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3913 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3914 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3915 self.assertEqual(mba, maa) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3916 self.assertEqual(mbb, mab) |
|
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3917 |
|
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3918 |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
3919 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
| 104 | 3920 def test_httpClient_lua(self): |
| 496 | 3921 retries = 4 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3922 result = '' |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3923 |
| 104 | 3924 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
| 496 | 3925 scriptContent = f.read() |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3926 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3927 while retries > 0 and not ('OK' in result): |
| 496 | 3928 print("Executing lua script HttpClient.lua") |
| 3929 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3930 retries -= 1 |
| 102 | 3931 |
| 3932 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3933 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3934 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3935 def test_bitbucket_issue_44(self): |
| 319 | 3936 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3937 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3938 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3939 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3940 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3941 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3942 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3943 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3944 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3945 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3946 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3947 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3948 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3949 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3950 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3951 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3952 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3953 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3954 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3955 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3956 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3957 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3958 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3959 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3960 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3961 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3962 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3963 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3964 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3965 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3966 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3967 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3968 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3969 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3970 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3971 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3972 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3973 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3974 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3975 def test_bitbucket_issue_42(self): |
| 319 | 3976 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3977 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3978 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3979 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3980 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3981 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3982 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3983 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3984 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3985 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3986 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3987 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3988 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3989 |
|
113
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3990 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3991 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3992 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3993 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3994 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3995 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3996 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3997 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3998 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3999 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4000 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4001 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4002 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4003 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4004 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4005 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4006 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4007 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4008 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4009 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4010 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4011 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4012 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4013 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4014 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4015 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4016 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4017 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4018 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4019 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4020 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4021 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4022 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4023 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4024 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4025 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4026 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4027 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4028 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4029 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4030 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4031 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4032 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4033 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4034 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4035 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4036 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4037 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4038 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4039 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4040 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4041 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4042 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4043 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4044 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4045 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4046 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4047 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4048 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4049 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4050 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4051 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4052 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4053 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4054 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4055 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4056 # "PHI remaining after anonymization" |
| 319 | 4057 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4058 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4059 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4060 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4061 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4062 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4063 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4064 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4065 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4066 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4067 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4068 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4069 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4070 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4071 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4072 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4073 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4074 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4075 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4076 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4077 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4078 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4079 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4080 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4081 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4082 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4083 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4084 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4085 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4086 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4087 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4088 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4089 self.assertFalse('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4090 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4091 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4092 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4093 t[value['Name']] = value['Value'] |
|
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test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4094 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4095 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
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test_bitbucket_issue_46
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113
diff
changeset
|
4096 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
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test_bitbucket_issue_46
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diff
changeset
|
4097 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
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113
diff
changeset
|
4098 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4099 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
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113
diff
changeset
|
4100 |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4101 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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test_bitbucket_issue_46
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113
diff
changeset
|
4102 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
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diff
changeset
|
4103 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4104 f.flush() |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4105 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4106 stderr = subprocess.STDOUT).split('\n') |
|
118
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test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
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117
diff
changeset
|
4107 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
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117
diff
changeset
|
4108 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4109 def test_bitbucket_issue_55(self): |
|
a954c535fef6
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diff
changeset
|
4110 def Run(modify, query): |
|
a954c535fef6
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diff
changeset
|
4111 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
4112 |
|
a954c535fef6
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diff
changeset
|
4113 operation = 'modify' if modify else 'anonymize' |
|
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diff
changeset
|
4114 |
|
a954c535fef6
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117
diff
changeset
|
4115 self.assertRaises(Exception, lambda: DoPost( |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
4116 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4117 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4118 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4119 query["Force"] = True |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4120 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4121 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4122 DoDelete(_REMOTE, a) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4123 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4124 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4125 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4126 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4127 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4128 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4129 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4130 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4131 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4132 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4133 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4134 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4135 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4136 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4137 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4138 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4139 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4140 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4141 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4142 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4143 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4144 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4145 # is set to "false" (default value). |
| 319 | 4146 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4147 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4148 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4149 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4150 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4151 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4152 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4153 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4154 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4155 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4156 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4157 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4158 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4159 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4160 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4161 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4162 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4163 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4164 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4165 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4166 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4167 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4168 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4169 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4170 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4171 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4172 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4173 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4174 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4175 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4176 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4177 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4178 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4179 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4180 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4181 |
| 125 | 4182 |
| 4183 def test_gbk_alias(self): | |
| 4184 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4185 # This test fails on Orthanc <= 1.3.0 | |
| 4186 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4187 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4188 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4189 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4190 |
| 4191 | |
| 4192 def test_long_tag(self): | |
| 4193 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4194 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4195 | |
| 4196 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4197 self.assertTrue('0018,1020' in tags) | |
| 4198 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4199 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4200 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4201 | |
| 4202 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4203 self.assertTrue('0018,1020' in tags) | |
| 4204 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4205 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4206 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4207 | |
| 4208 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4209 self.assertTrue('SoftwareVersions' in tags) | |
| 4210 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4211 self.assertTrue('HeartRate' in tags) | |
| 4212 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4213 | |
| 4214 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4215 self.assertTrue('SoftwareVersions' in tags) | |
| 4216 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4217 | |
| 4218 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4219 self.assertTrue('SoftwareVersions' in tags) | |
| 4220 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4221 | |
| 4222 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4223 self.assertTrue('SoftwareVersions' in tags) | |
| 4224 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4225 | |
| 4226 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4227 self.assertEqual(1, len(tags)) | |
| 4228 self.assertTrue(i in tags.keys()) | |
| 4229 self.assertTrue('0018,1020' in tags[i]) | |
| 4230 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4231 | |
| 4232 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4233 self.assertEqual(1, len(tags)) | |
| 4234 self.assertTrue(i in tags.keys()) | |
| 4235 self.assertTrue('0018,1020' in tags[i]) | |
| 4236 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4237 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4238 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4239 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4240 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4241 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4242 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4243 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4244 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4245 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4246 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4247 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4248 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4249 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4250 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4251 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4252 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4253 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4254 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4255 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4256 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4257 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4258 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4259 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4260 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4261 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4262 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4263 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4264 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4265 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4266 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4267 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4268 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4269 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4270 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4271 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4272 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4273 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4274 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4275 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4276 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4277 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4278 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4279 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4280 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4281 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4282 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4283 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4284 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4285 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4286 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4287 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4288 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4289 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4290 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4291 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4292 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4293 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4294 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4295 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4296 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4297 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4298 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4299 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4300 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4301 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4302 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4303 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4304 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4305 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4306 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4307 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4308 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4309 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4310 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4311 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4312 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4313 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4314 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4315 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4316 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4317 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4318 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4319 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4320 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4321 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4322 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4323 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4324 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4325 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4326 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4327 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4328 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4329 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4330 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4331 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4332 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4333 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4334 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4335 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4336 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4337 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4338 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4339 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4340 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4341 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4342 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4343 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4344 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4345 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4346 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4347 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4348 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4349 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4350 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4351 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4352 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4353 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4354 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4355 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4356 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4357 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4358 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4359 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4360 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4361 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4362 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4363 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4364 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4365 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4366 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4367 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4368 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4369 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4370 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4371 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4372 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4373 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4374 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4375 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4376 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4377 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4378 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4379 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4380 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4381 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4382 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4383 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4384 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4385 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4386 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4387 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4388 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4389 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4390 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4391 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4392 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4393 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4394 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4395 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4396 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4397 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4398 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4399 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4400 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4401 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4402 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4403 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4404 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4405 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4406 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4407 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4408 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4409 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4410 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4411 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4412 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4413 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4414 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4415 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4416 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4417 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4418 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4419 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4420 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4421 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4422 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4423 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4424 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4425 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4426 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4427 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4428 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4429 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4430 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4431 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4432 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4433 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4434 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4435 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4436 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4437 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4438 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4439 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4440 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4441 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4442 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4443 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4444 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4445 self.assertEqual(1, len(b)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4446 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4447 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4448 self.assertEqual(1, len(c)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4449 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4450 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4451 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4452 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4453 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4454 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4455 # Upload using the REST API |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4456 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
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4457 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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4458 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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4459 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4460 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4461 |
| 4462 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4463 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4464 | |
|
144
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4465 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4466 self.assertEqual('RestApi', m['Origin']) |
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4467 self.assertEqual('', m['RemoteAET']) |
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4468 self.assertNotEqual('', m['RemoteIP']) |
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|
4469 self.assertFalse('CalledAET' in m) |
| 315 | 4470 self.assertTrue('HttpUsername' in m) |
| 4471 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
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4472 |
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4473 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4474 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4475 self.assertEqual('1', m['IndexInSeries']) |
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4476 self.assertTrue('ReceptionDate' in m) |
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4477 |
|
143
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4478 DoDelete(_REMOTE, '/instances/%s' % i) |
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4479 |
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4480 # Upload using the DICOM protocol |
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4481 subprocess.check_call([ FindExecutable('storescu'), |
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4482 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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4483 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
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4484 '-xw' ]) # Propose JPEG2000 |
|
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4485 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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4486 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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4487 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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|
4488 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
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4489 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
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4490 |
|
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changeset
|
4491 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4492 self.assertEqual('DicomProtocol', m['Origin']) |
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|
4493 self.assertEqual('STORESCU', m['RemoteAET']) |
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|
4494 self.assertNotEqual('', m['RemoteIP']) |
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4495 self.assertEqual('ANY-SCP', m['CalledAET']) |
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|
4496 self.assertFalse('HttpUsername' in m) |
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4497 |
|
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changeset
|
4498 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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|
4499 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4500 self.assertEqual('1', m['IndexInSeries']) |
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|
4501 self.assertTrue('ReceptionDate' in m) |
| 147 | 4502 |
| 4503 | |
| 4504 def test_lua_deadlock(self): | |
| 4505 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4506 # is with the lua script I'm using for conversion of images to | |
| 4507 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4508 # instance appears to be stored and then everything just | |
| 4509 # halts, ie Orthanc wont respond to anything after that." | |
| 4510 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4511 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4512 |
| 4513 subprocess.check_call([ FindExecutable('storescu'), | |
| 4514 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4515 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4516 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4517 ]) | |
| 4518 | |
| 4519 instances = DoGet(_REMOTE, '/instances') | |
| 4520 self.assertEqual(2, len(instances)) | |
| 4521 | |
| 4522 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4523 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4524 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4525 self.assertEqual(t1, t2); |
|
154
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|
4526 |
|
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changeset
|
4527 |
|
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changeset
|
4528 def test_find_group_length(self): |
|
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4529 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
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|
4530 # one of the Generic Group Length tags (*, 0x0000) |
|
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test_find_group_length
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|
4531 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
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|
4532 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
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|
4533 self.assertFalse('UnableToProcess' in result) |
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|
4534 self.assertFalse('E:' in result) |
|
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4535 |
|
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changeset
|
4536 |
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changeset
|
4537 def test_split(self): |
|
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|
4538 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
4539 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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|
4540 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4541 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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|
4542 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4543 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
4544 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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changeset
|
4545 |
|
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changeset
|
4546 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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changeset
|
4547 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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changeset
|
4548 |
|
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diff
changeset
|
4549 info = DoGet(_REMOTE, '/studies/%s' % study) |
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diff
changeset
|
4550 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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diff
changeset
|
4551 |
|
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changeset
|
4552 job = MonitorJob2(_REMOTE, lambda: DoPost |
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diff
changeset
|
4553 (_REMOTE, '/studies/%s/split' % study, { |
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diff
changeset
|
4554 'Series' : [ t2 ], |
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|
4555 'Replace' : { 'PatientName' : 'Hello' }, |
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changeset
|
4556 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4557 'KeepSource' : False, |
| 4558 'Asynchronous' : True | |
|
179
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diff
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|
4559 })) |
|
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diff
changeset
|
4560 |
|
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diff
changeset
|
4561 self.assertNotEqual(None, job) |
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changeset
|
4562 |
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changeset
|
4563 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4564 self.assertEqual(2, len(studies)) |
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changeset
|
4565 |
|
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changeset
|
4566 series = set(DoGet(_REMOTE, '/series')) |
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|
4567 self.assertEqual(2, len(series)) |
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|
4568 self.assertTrue(t1 in series) |
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|
4569 |
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diff
changeset
|
4570 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4571 self.assertTrue(study in studies) |
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|
4572 self.assertTrue(study2 in studies) |
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|
4573 |
|
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diff
changeset
|
4574 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4575 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4576 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4577 |
|
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|
4578 sopInstanceUids = set() |
|
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|
4579 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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changeset
|
4580 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4581 |
|
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changeset
|
4582 self.assertTrue(knee1Sop in sopInstanceUids) |
|
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|
4583 |
|
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changeset
|
4584 # Fails if Orthanc <= 1.5.7 |
|
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4585 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4586 |
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4587 # One original instance is kept, another one is added because of the split |
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4588 self.assertEqual(2, len(sopInstanceUids)) |
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4589 |
|
179
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4590 |
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4591 def test_merge(self): |
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4592 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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4593 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
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4594 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4595 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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4596 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4597 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4598 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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4599 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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4600 |
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4601 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4602 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4603 |
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4604 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4605 (_REMOTE, '/studies/%s/merge' % knee, { |
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4606 'Resources' : [ brainix ], |
| 181 | 4607 'KeepSource' : True, |
| 4608 'Synchronous' : False | |
|
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4609 })) |
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4610 |
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|
4611 self.assertNotEqual(None, job) |
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4612 |
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4613 studies = set(DoGet(_REMOTE, '/studies')) |
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4614 self.assertEqual(2, len(studies)) |
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4615 self.assertTrue(knee in studies) |
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4616 self.assertTrue(brainix in studies) |
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4617 |
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4618 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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4619 self.assertTrue(t1 in series) |
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4620 series.remove(t1) |
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4621 self.assertEqual(1, len(series)) |
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4622 |
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4623 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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4624 self.assertEqual(1, len(instances)) |
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4625 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4626 |
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4627 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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4628 self.assertEqual(1, len(instances)) |
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4629 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4630 |
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4631 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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4632 self.assertEqual(1, len(instances)) |
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4633 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4634 |
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4635 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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4636 |
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4637 for key in tags['PatientMainDicomTags']: |
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|
4638 self.assertEqual(a[key], merged[key]) |
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4639 if (key in b and key != 'PatientSex'): |
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4640 self.assertNotEqual(a[key], b[key]) |
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4641 |
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4642 for key in tags['MainDicomTags']: |
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4643 # Not in the patient/study module |
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4644 if (not key in [ 'InstitutionName', |
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4645 'RequestingPhysician', |
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4646 'RequestedProcedureDescription', ]): |
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4647 self.assertEqual(a[key], merged[key]) |
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4648 if (key in b): |
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4649 self.assertNotEqual(a[key], b[key]) |
|
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4650 |
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4651 sopInstanceUids = set() |
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4652 for i in DoGet(_REMOTE, '/instances?expand'): |
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4653 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4654 |
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4655 self.assertTrue(kneeSop in sopInstanceUids) |
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4656 self.assertTrue(brainixSop in sopInstanceUids) |
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4657 |
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4658 # Fails if Orthanc <= 1.5.7 |
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4659 # The 2 original instances are kept, another one is added because of the merge |
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4660 self.assertEqual(3, len(sopInstanceUids)) |
|
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4661 |
| 187 | 4662 |
| 4663 def test_async_archive(self): | |
| 4664 # Testing the asynchronous generation of archives/medias (new | |
| 4665 # in Orthanc 1.4.3) | |
| 4666 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4667 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4668 | |
| 4669 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4670 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4671 | |
| 4672 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 508 | 4673 (_REMOTE, '/series/%s/archive' % kneeT1, { |
| 187 | 4674 'Synchronous' : False |
| 4675 })) | |
| 4676 | |
| 4677 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4678 self.assertEqual(1, len(z.namelist())) | |
| 4679 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4680 | |
|
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|
4681 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4682 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4683 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4684 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4685 |
| 187 | 4686 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 508 | 4687 (_REMOTE, '/series/%s/media' % kneeT1, { |
| 187 | 4688 'Synchronous' : False |
| 4689 })) | |
| 4690 | |
| 4691 # The archive from the first job has been replaced by the | |
| 4692 # archive from second job (as MediaArchiveSize == 1) | |
| 4693 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4694 | |
| 4695 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4696 self.assertEqual(2, len(z.namelist())) | |
| 4697 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4698 | |
|
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|
4699 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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4700 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4701 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4702 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4703 |
| 187 | 4704 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4705 (_REMOTE, '/tools/create-archive', { | |
| 4706 'Synchronous' : False, | |
| 4707 'Resources' : [ kneeT1, kneeT2 ], | |
| 4708 })) | |
| 4709 | |
| 4710 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4711 self.assertEqual(2, len(z.namelist())) | |
| 4712 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4713 | |
|
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|
4714 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4715 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4716 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4717 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4718 |
| 187 | 4719 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4720 (_REMOTE, '/tools/create-media', { | |
| 4721 'Synchronous' : False, | |
| 4722 'Resources' : [ kneeT1, kneeT2 ], | |
| 4723 })) | |
| 4724 | |
| 4725 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4726 self.assertEqual(3, len(z.namelist())) | |
| 4727 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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4728 |
|
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|
4729 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4730 self.assertEqual(2, info['Content']['InstancesCount']) |
|
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test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4731 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
|
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4732 |
| 187 | 4733 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4734 def test_queries_hierarchy(self): |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4735 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4736 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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new test: test_queries_hierarchy
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187
diff
changeset
|
4737 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4738 tags = { |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4739 'NumberOfPatientRelatedInstances' : '', |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4740 'NumberOfPatientRelatedSeries' : '', |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4741 'NumberOfPatientRelatedStudies' : '', |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4742 'NumberOfStudyRelatedInstances' : '', |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4743 'NumberOfStudyRelatedSeries' : '', |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4744 'NumberOfSeriesRelatedInstances' : '', |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4745 } |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4746 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4747 tags2 = copy.copy(tags) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4748 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4749 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4750 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4751 'Level' : 'Patient', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4752 'Query' : tags2 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4753 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4754 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4755 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4756 'Level' : 'Study', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4757 'Query' : tags2 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4758 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4759 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4760 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4761 'Level' : 'Series', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4762 'Query' : tags2 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4763 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4764 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4765 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4766 'Level' : 'Instance', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4767 'Query' : tags2 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4768 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4769 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4770 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4771 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4772 self.assertEqual('887', p[0]['PatientID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4773 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4774 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4775 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4776 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4777 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4778 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4779 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4780 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4781 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4782 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4783 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4784 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4785 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4786 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4787 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4788 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4789 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4790 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4791 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4792 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4793 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4794 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4795 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4796 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4797 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4798 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4799 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4800 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4801 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4802 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4803 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4804 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4805 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4806 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4807 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4808 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4809 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4810 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4811 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4812 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4813 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4814 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4815 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4816 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4817 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4818 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4819 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4820 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4821 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4822 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4823 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4824 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4825 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4826 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4827 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4828 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4829 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4830 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4831 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4832 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4833 |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4834 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4835 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4836 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
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parents:
188
diff
changeset
|
4837 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4838 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4839 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4840 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4841 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4842 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4843 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4844 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4845 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4846 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4847 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4848 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4849 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4850 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4851 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4852 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4853 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4854 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4855 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4856 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4857 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4858 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4859 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4860 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4861 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4862 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4863 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4864 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4865 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4866 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4867 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4868 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4869 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4870 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4871 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4872 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4873 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4874 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4875 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4876 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4877 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4878 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4879 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4880 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4881 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4882 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4883 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4884 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4885 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4886 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4887 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4888 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4889 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4890 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4891 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4892 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4893 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4894 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4895 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4896 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4897 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4898 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4899 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4900 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4901 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4902 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4903 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4904 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4905 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4906 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4907 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4908 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4909 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4910 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4911 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4912 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4913 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4914 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4915 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4916 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4917 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4918 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4919 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4920 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4921 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4922 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4923 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4924 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4925 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4926 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4927 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4928 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4929 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4930 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4931 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
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parents:
384
diff
changeset
|
4932 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4933 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4934 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4935 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4936 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4937 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4938 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4939 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4940 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4941 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4942 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4943 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4944 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4945 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4946 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4947 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4948 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4949 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4950 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4951 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4952 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4953 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4954 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4955 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4956 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4957 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4958 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4959 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4960 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4961 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4962 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4963 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4964 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4965 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4966 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4967 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4968 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
| 508 | 4969 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
| 4970 | |
| 4971 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4972 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4973 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4974 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4975 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4976 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4977 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4978 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4979 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4980 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4981 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4982 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4983 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4984 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4985 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4986 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4987 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4988 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4989 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4990 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4991 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4992 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4993 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4994 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4995 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4996 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4997 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4998 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4999 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5000 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5001 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5002 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5003 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5004 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5005 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5006 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5007 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5008 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5009 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5010 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5011 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5012 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5013 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5014 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5015 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5016 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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208
diff
changeset
|
5017 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5018 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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208
diff
changeset
|
5019 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5020 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5021 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5022 self.assertEqual(0, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5023 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5024 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5025 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5026 self.assertEqual(1, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5027 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5028 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5029 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5030 self.assertEqual(1, len(a)) |
| 211 | 5031 |
| 5032 | |
| 5033 def test_series_status(self): | |
| 5034 def HasCompletedInChanges(): | |
| 5035 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 5036 if c['ChangeType'] == 'CompletedSeries': | |
| 5037 return True; | |
| 5038 | |
| 5039 return False | |
| 5040 | |
| 5041 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 5042 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 5043 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5044 self.assertFalse(HasCompletedInChanges()) | |
| 5045 | |
| 5046 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 5047 | |
| 5048 for i in range(3): | |
| 5049 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 5050 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5051 self.assertFalse(HasCompletedInChanges()) | |
| 5052 | |
| 5053 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 5054 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5055 self.assertTrue(HasCompletedInChanges()) | |
| 5056 | |
| 5057 DoDelete(_REMOTE, '/changes') | |
| 5058 self.assertFalse(HasCompletedInChanges()) | |
| 5059 | |
| 5060 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 5061 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5062 self.assertFalse(HasCompletedInChanges()) | |
| 5063 | |
| 215 | 5064 |
| 5065 def test_dicomweb(self): | |
| 5066 def Compare(dicom, reference): | |
| 5067 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5068 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 5069 headers = { 'Accept' : 'application/dicom+json' }) | |
| 5070 with open(GetDatabasePath(reference), 'rb') as c: | |
| 5071 d = json.load(c) | |
| 220 | 5072 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 5073 |
| 5074 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 5075 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 5076 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 5077 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 5078 |
| 5079 | |
| 5080 def test_issue_95_encodings(self): | |
| 319 | 5081 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 5082 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 5083 | |
| 5084 # Very useful tool: "file2" from package "file-kanji" | |
| 5085 | |
| 5086 def GetPatientName(dicom): | |
| 5087 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5088 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 5089 return j['PatientName'] | |
| 5090 | |
| 5091 def ComparePatientName(name, dicom): | |
| 5092 self.assertEqual(name, GetPatientName(dicom)) | |
| 5093 | |
| 5094 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5095 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 5096 | |
| 5097 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 5098 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 5099 | |
| 5100 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 5101 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 5102 | |
| 5103 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 5104 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 5105 | |
| 5106 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 5107 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 5108 | |
| 5109 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5110 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 5111 | |
| 5112 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 5113 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 5114 | |
| 5115 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 5116 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 5117 | |
| 5118 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 5119 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 5120 # Linux console into Emacs automatically reverse the string | |
| 5121 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 5122 | |
| 5123 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 5124 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 5125 # characters by default, but copy/paste works with Emacs | |
| 5126 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 5127 | |
| 5128 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 5129 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 5130 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 5131 # remainer. Orthanc only takes into consideration the first | |
| 5132 # codepage: This is a limitation. | |
| 5133 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 5134 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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5135 |
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5136 |
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5137 def test_findscu_missing_tags(self): |
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5138 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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5139 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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5140 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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5141 |
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5142 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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5143 |
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5144 # We have 2 instances... |
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5145 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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5146 self.assertEqual(2, len(patientNames)) |
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5147 self.assertEqual('KNIX', patientNames[0]) |
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5148 self.assertEqual('KNIX', patientNames[1]) |
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5149 |
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5150 # ...but only 1 value for the "Rows" tag |
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5151 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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5152 self.assertEqual(1, len(rows)) |
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5153 self.assertEqual('512', rows[0]) |
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5154 |
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5155 |
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5156 |
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5157 def test_bitbucket_issue_131(self): |
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5158 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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5159 # StudyInstanceUID in it's database." |
| 319 | 5160 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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5161 |
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5162 # Insert 2 instances, with the same StudyInstanceUID, but with |
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5163 # different patient IDs. Orthanc will create 2 distincts |
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5164 # patients, and the hierarchy of resources above the two |
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5165 # instances will be fully disjoint. |
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5166 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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5167 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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5168 |
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5169 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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5170 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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5171 |
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5172 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5173 'Level' : 'Study', |
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5174 'Query' : {"PatientID": "A" }})['ID'] |
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5175 |
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5176 # 1 study is matched |
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5177 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5178 |
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|
5179 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5180 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5181 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5182 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5183 |
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5184 # The two studies are matched, as we made the request at the |
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5185 # Study level, thus the shared StudyInstanceUID is used as the key |
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5186 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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|
5187 |
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5188 |
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5189 # Match the 2 studies |
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5190 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5191 'Level' : 'Study', |
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5192 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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5193 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5194 DropOrthanc(_LOCAL) |
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5195 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5196 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5197 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5198 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5199 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5200 |
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5201 |
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5202 # Same test, at the patient level => only 1 instance is transfered |
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5203 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5204 'Level' : 'Patient', |
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5205 'Query' : {"PatientID": "A" }})['ID'] |
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5206 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5207 DropOrthanc(_LOCAL) |
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5208 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5209 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5210 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5211 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5212 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5213 |
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5214 |
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5215 # Same test, at the series level => only 1 instance is transfered |
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5216 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5217 'Level' : 'Series', |
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5218 'Query' : {"PatientID": "A" }})['ID'] |
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diff
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|
5219 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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diff
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|
5220 DropOrthanc(_LOCAL) |
|
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diff
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|
5221 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5222 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5223 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5224 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
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|
5225 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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5226 |
|
233
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231
diff
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|
5227 |
|
ce0b19a2c807
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diff
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|
5228 def test_bitbucket_issue_136(self): |
|
ce0b19a2c807
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diff
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|
5229 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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diff
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|
5230 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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diff
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|
5231 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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diff
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|
5232 self.assertEqual(1, len(patientNames)) |
|
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diff
changeset
|
5233 self.assertEqual('John Doe', patientNames[0]) |
|
234
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diff
changeset
|
5234 |
|
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test_anonymize_relationships_4
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diff
changeset
|
5235 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
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5236 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
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5237 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
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test_anonymize_relationships_4
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diff
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|
5238 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
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diff
changeset
|
5239 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5240 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
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5241 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5242 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
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test_anonymize_relationships_4
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diff
changeset
|
5243 'application/json')['ID'] |
|
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test_anonymize_relationships_4
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diff
changeset
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5244 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
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diff
changeset
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5245 self.assertEqual(2, len(series)) |
|
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diff
changeset
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5246 |
|
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test_anonymize_relationships_4
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diff
changeset
|
5247 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5248 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5249 self.assertEqual(1, len(cr)) |
|
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diff
changeset
|
5250 self.assertEqual(1, len(pr)) |
|
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diff
changeset
|
5251 self.assertEqual(1, len(cr[0]['Instances'])) |
|
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diff
changeset
|
5252 self.assertEqual(1, len(pr[0]['Instances'])) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5253 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5254 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5255 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
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233
diff
changeset
|
5256 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5257 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5258 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5259 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5260 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5261 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5262 # This fails on Orthanc <= 1.5.6 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5263 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5264 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5265 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5266 |
|
255
02c3d91b155c
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254
diff
changeset
|
5267 def test_anonymize_relationships_5(self): |
|
02c3d91b155c
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amazy
parents:
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diff
changeset
|
5268 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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amazy
parents:
254
diff
changeset
|
5269 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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amazy
parents:
254
diff
changeset
|
5270 oStudyId = ct1['ParentStudy'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5271 oCtInstanceId = ct1['ID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5272 oRtInstanceId = rt1['ID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5273 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5274 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5275 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5276 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5277 # first validate the relationships in the source data |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5278 oStudyUID = oCtTags['StudyInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5279 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5280 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5281 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5282 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5283 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5284 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5285 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5286 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5287 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5288 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5289 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5290 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5291 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5292 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5293 ### anonymize |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5294 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5295 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
|
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amazy
parents:
254
diff
changeset
|
5296 'application/json')['ID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5297 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5298 ### validate |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5299 |
|
02c3d91b155c
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254
diff
changeset
|
5300 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
|
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parents:
254
diff
changeset
|
5301 self.assertEqual(2, len(aSeries)) |
|
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parents:
254
diff
changeset
|
5302 |
|
02c3d91b155c
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254
diff
changeset
|
5303 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
|
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254
diff
changeset
|
5304 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
|
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diff
changeset
|
5305 aCtInstanceId = aCt[0]['Instances'][0] |
|
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254
diff
changeset
|
5306 aRtInstanceId = aRt[0]['Instances'][0] |
|
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254
diff
changeset
|
5307 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
|
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diff
changeset
|
5308 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
|
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254
diff
changeset
|
5309 |
|
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254
diff
changeset
|
5310 # now validate the relationships in the anonymized data |
|
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diff
changeset
|
5311 aStudyUID = aCtTags['StudyInstanceUID'] |
|
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diff
changeset
|
5312 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5313 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5314 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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diff
changeset
|
5315 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5316 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5317 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
|
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254
diff
changeset
|
5318 |
|
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diff
changeset
|
5319 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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diff
changeset
|
5320 # make sure all UIDs have been updated |
|
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diff
changeset
|
5321 self.assertNotEqual(oStudyUID, aStudyUID) |
|
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diff
changeset
|
5322 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
|
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diff
changeset
|
5323 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
|
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254
diff
changeset
|
5324 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
|
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diff
changeset
|
5325 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
|
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diff
changeset
|
5326 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
|
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254
diff
changeset
|
5327 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
|
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diff
changeset
|
5328 |
|
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|
5329 # validate the relationships |
|
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|
5330 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
|
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diff
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|
5331 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5332 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5333 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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|
5334 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5335 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5336 |
| 256 | 5337 def test_anonymize_relationships_5b(self): |
| 5338 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5339 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5340 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5341 oStudyId = ct1['ParentStudy'] | |
| 5342 oCtInstanceId = ct1['ID'] | |
| 5343 oRtInstanceId = rt1['ID'] | |
| 5344 | |
| 5345 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5346 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5347 | |
| 5348 ### anonymize while forcing the StudyInstanceUID | |
| 5349 | |
| 5350 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5351 'application/json')['ID'] | |
| 5352 | |
| 5353 ### validate | |
| 5354 | |
| 5355 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5356 self.assertEqual(2, len(aSeries)) | |
| 5357 | |
| 5358 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5359 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5360 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5361 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5362 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5363 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5364 | |
| 5365 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5366 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5367 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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|
5368 |
|
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|
5369 |
|
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|
5370 def test_bitbucket_issue_140(self): |
| 266 | 5371 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5372 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5373 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
235
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diff
changeset
|
5374 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
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test_bitbucket_issue_140
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diff
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|
5375 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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|
5376 |
|
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test_bitbucket_issue_140
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diff
changeset
|
5377 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5378 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5379 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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diff
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|
5380 }, 'application/json') ['ID'] |
|
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diff
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|
5381 |
|
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diff
changeset
|
5382 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
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|
5383 self.assertEqual(1, len(instances)) |
|
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diff
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|
5384 |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5385 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5386 t = tags['4321,1012'] |
|
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test_bitbucket_issue_140
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diff
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|
5387 self.assertEqual('String', t['Type']) |
|
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test_bitbucket_issue_140
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|
5388 self.assertEqual('RadioButton3', t['Name']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5389 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5390 self.assertEqual('jklmopq', t['Value']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5391 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5392 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5393 t = tags['4321,1012'] |
| 327 | 5394 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
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diff
changeset
|
5395 self.assertEqual('RadioButton3', t['Name']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5396 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5397 self.assertEqual('aaabbbccc', t['Value']) |
|
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diff
changeset
|
5398 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5399 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5400 def test_find_normalize(self): |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5401 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5402 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5403 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
test_find_normalize
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diff
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|
5404 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5405 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5406 'Level' : 'Instance', |
|
2de1aec255ae
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235
diff
changeset
|
5407 'Query' : { 'Rows' : '42' } |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5408 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5409 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5410 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5411 self.assertEqual(1, len(b)) |
|
2de1aec255ae
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235
diff
changeset
|
5412 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
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|
5413 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5414 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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diff
changeset
|
5415 'Level' : 'Instance', |
|
2de1aec255ae
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diff
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|
5416 'Query' : { 'Rows' : '42' }, |
|
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test_find_normalize
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diff
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|
5417 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5418 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5419 |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5420 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5421 self.assertEqual(0, len(b)) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5422 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5423 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5424 'Level' : 'Instance', |
|
2de1aec255ae
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235
diff
changeset
|
5425 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
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diff
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|
5426 'Normalize' : False |
|
2de1aec255ae
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235
diff
changeset
|
5427 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5428 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5429 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
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diff
changeset
|
5430 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5431 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
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235
diff
changeset
|
5432 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5433 |
| 5434 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5435 'Level' : 'Instance', | |
| 5436 'Query' : { 'Rows' : '' }, | |
| 5437 'Normalize' : False | |
| 5438 }) ['ID'] | |
| 5439 | |
| 5440 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5441 self.assertEqual(1, len(b)) | |
| 5442 self.assertTrue('Rows' in b[0]) | |
| 5443 self.assertEqual('512', b[0]['Rows']) | |
| 5444 | |
| 5445 self.assertRaises(Exception, lambda: DoPost( | |
| 5446 _REMOTE, '/modalities/self/query', { | |
| 5447 'Level' : 'Instance', | |
| 5448 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5449 'Normalize' : False | |
| 5450 })) | |
|
243
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diff
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|
5451 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
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|
5452 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5453 def test_bitbucket_issue_141(self): |
| 319 | 5454 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5455 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5456 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
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|
5457 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5458 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
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diff
changeset
|
5459 pdf = f.read() |
|
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|
5460 |
|
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test_bitbucket_issue_141
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diff
changeset
|
5461 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
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test_bitbucket_issue_141
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diff
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|
5462 'Parent' : study, |
|
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|
5463 'Tags' : {}, |
|
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|
5464 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
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|
5465 }) ['ID'] |
|
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|
5466 |
|
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changeset
|
5467 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
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|
5468 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
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changeset
|
5469 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
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changeset
|
5470 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
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test_modifying_missing_patientid
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changeset
|
5471 |
|
1abdab0ba0e6
test_modifying_missing_patientid
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diff
changeset
|
5472 |
|
1abdab0ba0e6
test_modifying_missing_patientid
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diff
changeset
|
5473 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
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changeset
|
5474 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
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test_modifying_missing_patientid
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diff
changeset
|
5475 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5476 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5477 |
| 5478 | |
| 5479 def test_log_level(self): | |
| 319 | 5480 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5481 original = DoGet(_REMOTE, '/tools/log-level') |
| 5482 | |
| 5483 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5484 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5485 DoGet(_REMOTE, '/system') | |
| 5486 | |
| 5487 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5488 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5489 DoGet(_REMOTE, '/system') | |
| 5490 | |
| 5491 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5492 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5493 DoGet(_REMOTE, '/system') | |
| 5494 | |
| 5495 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5496 | |
| 5497 # Switch back to the original log level | |
| 5498 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5499 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5500 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5501 def test_upload_compressed(self): |
| 265 | 5502 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5503 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5504 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5505 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5506 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5507 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5508 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5509 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5510 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5511 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5512 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5513 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5514 |
| 5515 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5516 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5517 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5518 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5519 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5520 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5521 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5522 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5523 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5524 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5525 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5526 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5527 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5528 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5529 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5530 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5531 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5532 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5533 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5534 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5535 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5536 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5537 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5538 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5539 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5540 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5541 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5542 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5543 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5544 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5545 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5546 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5547 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5548 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5549 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5550 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5551 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5552 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5553 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5554 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5555 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5556 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5557 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5558 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5559 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5560 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5561 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5562 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5563 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5564 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5565 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5566 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5567 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5568 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5569 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5570 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5571 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5572 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5573 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5574 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5575 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5576 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5577 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5578 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5579 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5580 # those with the missing tag |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5581 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5582 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5583 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5584 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5585 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5586 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5587 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5588 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5589 # "Universal matching" will match all entities, including |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5590 # those with the missing tag |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5591 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5592 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5593 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5594 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5595 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5596 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5597 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5598 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5599 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5600 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5601 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5602 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5603 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5604 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5605 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5606 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5607 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5608 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5609 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5610 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5611 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5612 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5613 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5614 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5615 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5616 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5617 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5618 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5619 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5620 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5621 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5622 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5623 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5624 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5625 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5626 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5627 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5628 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5629 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5630 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5631 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5632 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5633 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5634 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5635 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5636 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5637 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5638 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5639 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5640 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5641 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5642 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5643 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5644 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5645 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5646 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5647 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5648 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5649 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5650 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5651 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5652 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5653 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5654 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5655 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5656 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5657 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5658 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5659 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5660 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5661 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5662 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5663 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5664 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5665 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5666 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5667 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5668 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5669 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5670 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5671 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5672 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5673 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5674 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5675 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5676 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5677 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5678 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5679 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5680 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5681 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5682 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5683 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5684 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5685 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5686 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5687 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5688 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5689 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5690 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5691 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5692 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5693 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5694 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5695 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5696 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5697 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5698 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5699 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5700 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5701 for level in [ 'Study', 'Series' ] : |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5702 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5703 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5704 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5705 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5706 'StudyInstanceUID' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5707 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5708 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5709 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5710 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5711 'Level' : level, |
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5712 'Query' : { |
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5713 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
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5714 }, |
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5715 'Normalize' : normalize, |
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5716 })) |
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5717 self.assertEqual(1, CountAnswers({ |
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5718 'Level' : level, |
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5719 'Query' : { |
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5720 'StudyInstanceUID' : '4.5.6' # This is the actual value |
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5721 }, |
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5722 'Normalize' : normalize, |
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5723 })) |
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5724 |
| 269 | 5725 # Wildcard matching is not allowed for this VR |
|
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5726 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5727 self.assertRaises(Exception, lambda: CountAnswers({ |
|
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5728 'Level' : level, |
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5729 'Query' : { |
| 269 | 5730 'StudyInstanceUID' : '*' |
|
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5731 }, |
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5732 'Normalize' : normalize, |
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5733 })) |
| 265 | 5734 |
| 5735 | |
| 5736 def test_rendered(self): | |
| 5737 # New in Orthanc 1.6.0 | |
| 5738 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5739 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5740 self.assertEqual("RGB", im.mode) | |
| 5741 self.assertEqual(41, im.size[0]) | |
| 5742 self.assertEqual(41, im.size[1]) | |
| 5743 | |
| 5744 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5745 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5746 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5747 | |
| 5748 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5749 self.assertEqual("RGB", im.mode) | |
| 5750 self.assertEqual(10, im.size[0]) | |
| 5751 self.assertEqual(10, im.size[1]) | |
| 5752 | |
| 5753 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5754 self.assertEqual("RGB", im.mode) | |
| 5755 self.assertEqual(10, im.size[0]) | |
| 5756 self.assertEqual(10, im.size[1]) | |
| 5757 | |
| 5758 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5759 self.assertEqual("RGB", im.mode) | |
| 5760 self.assertEqual(128, im.size[0]) | |
| 5761 self.assertEqual(128, im.size[1]) | |
| 5762 | |
| 5763 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5764 self.assertEqual("RGB", im.mode) | |
| 5765 self.assertEqual(10, im.size[0]) | |
| 5766 self.assertEqual(10, im.size[1]) | |
| 5767 | |
| 5768 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5769 self.assertEqual("RGB", im.mode) | |
| 5770 self.assertEqual(10, im.size[0]) | |
| 5771 self.assertEqual(10, im.size[1]) | |
| 5772 | |
| 5773 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5774 self.assertEqual("RGB", im.mode) | |
| 5775 self.assertEqual(5, im.size[0]) | |
| 5776 self.assertEqual(5, im.size[1]) | |
| 5777 | |
| 5778 | |
| 5779 # Grayscale image | |
| 5780 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5781 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5782 self.assertEqual("L", im.mode) | |
| 5783 self.assertEqual(288, im.size[0]) | |
| 5784 self.assertEqual(288, im.size[1]) | |
| 5785 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5786 | |
| 5787 # Those are the original windowing parameters that are written | |
| 5788 # inside the DICOM file | |
| 5789 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5790 self.assertEqual("L", im2.mode) | |
| 5791 self.assertEqual(288, im2.size[0]) | |
| 5792 self.assertEqual(288, im2.size[1]) | |
| 5793 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5794 | |
| 5795 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5796 self.assertEqual("L", im.mode) | |
| 5797 self.assertEqual(512, im.size[0]) | |
| 5798 self.assertEqual(512, im.size[1]) | |
| 5799 | |
| 5800 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5801 self.assertEqual("L", im.mode) | |
| 5802 self.assertEqual(10, im.size[0]) | |
| 5803 self.assertEqual(10, im.size[1]) | |
| 5804 | |
| 5805 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5806 self.assertEqual("L", im.mode) | |
| 5807 self.assertEqual(10, im.size[0]) | |
| 5808 self.assertEqual(10, im.size[1]) | |
| 5809 | |
| 5810 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5811 self.assertEqual("L", im.mode) | |
| 5812 self.assertEqual(1, im.size[0]) | |
| 5813 self.assertEqual(1, im.size[1]) | |
| 5814 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5815 | |
| 5816 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5817 self.assertEqual("L", im.mode) | |
| 5818 self.assertEqual(1, im.size[0]) | |
| 5819 self.assertEqual(1, im.size[1]) | |
| 5820 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5821 | |
| 5822 | |
| 5823 # Test monochrome 1 | |
| 5824 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5825 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5826 self.assertEqual("L", im.mode) | |
| 5827 self.assertEqual(2010, im.size[0]) | |
| 5828 self.assertEqual(2446, im.size[1]) | |
| 5829 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5830 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5831 self.assertEqual("L", im.mode) | |
| 5832 self.assertEqual(20, im.size[0]) | |
| 5833 self.assertEqual(24, im.size[1]) | |
| 5834 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5835 self.assertEqual("L", im.mode) | |
| 5836 self.assertEqual(20, im.size[0]) | |
| 5837 self.assertEqual(24, im.size[1]) | |
| 5838 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5839 self.assertEqual("L", im.mode) | |
| 5840 self.assertEqual(10, im.size[0]) | |
| 5841 self.assertEqual(12, im.size[1]) | |
| 5842 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5843 self.assertEqual("L", im.mode) | |
| 5844 self.assertEqual(20, im.size[0]) | |
| 5845 self.assertEqual(24, im.size[1]) | |
|
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5846 |
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5847 |
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5848 def test_bitbucket_issue_154(self): |
|
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5849 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5850 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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5851 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5852 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5853 |
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5854 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5855 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5856 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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5857 |
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5858 # C-FIND is working on list of UIDs |
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5859 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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5860 '-k', 'StudyInstanceUID=%s' % study, |
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5861 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5862 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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5863 self.assertEqual(2, len(series)) |
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5864 self.assertTrue(series1 in series) |
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5865 self.assertTrue(series2 in series) |
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5866 |
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5867 # Individual retrieval is working in Orthanc < 1.6.0 |
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5868 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5869 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5870 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5871 '-k', 'StudyInstanceUID=%s' % study, |
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5872 '-k', 'SeriesInstanceUID=%s' % series1, |
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5873 ]))) |
|
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5874 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5875 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5876 '-k', 'StudyInstanceUID=%s' % study, |
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5877 '-k', 'SeriesInstanceUID=%s' % series2, |
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5878 ]))) |
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5879 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5880 |
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5881 DropOrthanc(_LOCAL) |
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5882 |
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5883 # But list matching is working only in Orthanc >= 1.6.0 |
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5884 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5885 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5886 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5887 '-k', 'StudyInstanceUID=%s' % study, |
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5888 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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5889 ]))) |
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5890 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5891 |
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5892 |
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5893 def test_storage_commitment_api(self): |
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5894 # Storage commitment is available since Orthanc 1.6.0 |
|
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5895 |
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5896 def WaitTransaction(uid): |
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5897 while True: |
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5898 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5899 if s['Status'] != 'Pending': |
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5900 return s |
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5901 else: |
|
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5902 time.sleep(0.01) |
|
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|
5903 |
| 281 | 5904 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5905 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5906 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5907 |
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5908 # Against self |
| 281 | 5909 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5910 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5911 }) ['ID'] | |
|
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5912 self.assertTrue(transaction.startswith('2.25.')) |
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5913 |
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5914 result = WaitTransaction(transaction) |
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5915 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5916 self.assertEqual('Success', result['Status']) |
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5917 self.assertEqual(1, len(result['Success'])) |
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5918 self.assertEqual(0, len(result['Failures'])) |
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5919 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5920 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5921 |
| 281 | 5922 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5923 "DicomInstances" : [ | |
| 5924 { 'SOPClassUID' : sopClassUid, | |
| 5925 'SOPInstanceUID' : sopInstanceUid }, | |
| 5926 ], | |
| 5927 }) | |
| 5928 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5929 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5930 | |
| 5931 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5932 "Resources" : [ | |
| 5933 instance['ID'], | |
| 5934 instance['ParentSeries'], | |
| 5935 instance['ParentStudy'], | |
| 5936 instance['ParentPatient'], | |
| 5937 ] | |
| 5938 }) | |
|
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5939 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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5940 self.assertEqual(result, WaitTransaction(transaction)) |
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|
5941 |
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5942 |
| 281 | 5943 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5944 "DicomInstances" : [ | |
| 5945 [ 'nope', 'nope2' ], | |
| 5946 [ sopClassUid, sopInstanceUid ], | |
| 5947 ], | |
| 5948 }) ['ID'] | |
|
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5949 self.assertTrue(transaction.startswith('2.25.')) |
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5950 |
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|
5951 result = WaitTransaction(transaction) |
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|
5952 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5953 self.assertEqual('Failure', result['Status']) |
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5954 self.assertEqual(1, len(result['Success'])) |
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|
5955 self.assertEqual(1, len(result['Failures'])) |
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|
5956 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5957 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5958 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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5959 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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5960 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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|
5961 |
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5962 # Cannot remove items from a failed storage commitment transaction |
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5963 self.assertRaises(Exception, lambda: |
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5964 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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5965 |
|
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5966 |
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5967 # Against Orthanc 0.8.6, that does not support storage commitment |
|
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5968 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
5969 self.assertRaises(Exception, lambda: |
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|
5970 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
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|
5971 "DicomInstances" : [ |
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5972 [ sopClassUid, sopInstanceUid ], |
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5973 ] |
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5974 })) |
|
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5975 |
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|
5976 |
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5977 |
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5978 def test_storage_commitment_store(self): |
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5979 # Storage commitment is available since Orthanc 1.6.0 |
|
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5980 |
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|
5981 def WaitTransaction(uid): |
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|
5982 while True: |
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5983 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5984 if s['Status'] != 'Pending': |
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5985 return s |
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|
5986 else: |
|
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|
5987 time.sleep(0.01) |
|
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|
5988 |
|
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5989 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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5990 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
5991 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5992 |
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5993 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
509
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|
5994 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
5995 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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|
5996 'Resources' : [ i ], |
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|
5997 'StorageCommitment' : True, |
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|
5998 })) |
|
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5999 |
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6000 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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6001 'Resources' : [ i ], |
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6002 'StorageCommitment' : False, |
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6003 }) |
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6004 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6005 |
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6006 j = DoPost(_REMOTE, '/modalities/self/store', { |
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6007 'Resources' : [ i ], |
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6008 'StorageCommitment' : True, |
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6009 }) |
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|
6010 |
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6011 transaction = j['StorageCommitmentTransactionUID'] |
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6012 self.assertTrue(transaction.startswith('2.25.')) |
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6013 |
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|
6014 result = WaitTransaction(transaction) |
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|
6015 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
6016 self.assertEqual('Success', result['Status']) |
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|
6017 self.assertEqual(1, len(result['Success'])) |
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|
6018 self.assertEqual(0, len(result['Failures'])) |
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|
6019 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
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6020 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
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6021 result['Success'][0]['SOPInstanceUID']) |
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6022 |
|
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|
6023 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6024 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
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6025 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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6026 |
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6027 |
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6028 def test_store_straight(self): # New in Orthanc 1.6.1 |
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6029 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6030 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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6031 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6032 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6033 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6034 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6035 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6036 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6037 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6038 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6039 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6040 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6041 answer['SOPClassUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6042 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6043 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6044 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6045 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6046 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6047 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6048 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6049 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6050 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6051 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6052 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6053 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6054 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6055 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6056 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6057 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6058 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6059 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6060 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6061 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6062 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6063 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6064 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6065 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6066 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6067 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6068 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6069 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6070 |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6071 # Export, with transcoding disabled => this fails with 0.8.6 but not with more recent versions |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6072 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6073 DoPut(_REMOTE, '/modalities/toto', params) |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6074 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6075 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6076 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6077 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
6078 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6079 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6080 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6081 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6082 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6083 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6084 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6085 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6086 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6087 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6088 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6089 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6090 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6091 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6092 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6093 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6094 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6095 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6096 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6097 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6098 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6099 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6100 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6101 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6102 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6103 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6104 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6105 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6106 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6107 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6108 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6109 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6110 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6111 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6112 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6113 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6114 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6115 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6116 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6117 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6118 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6119 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6120 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
6121 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6122 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6123 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6124 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6125 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6126 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6127 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6128 |
| 304 | 6129 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6130 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6131 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6132 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6133 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6134 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6135 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6136 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6137 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6138 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6139 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6140 'Keep' : [ 'SOPInstanceUID' ], |
|
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HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6141 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6142 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6143 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6144 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6145 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6146 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6147 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6148 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6149 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6150 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6151 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6152 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6153 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6154 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6155 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6156 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6157 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6158 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6159 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6160 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6161 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6162 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6163 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6164 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6165 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6166 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6167 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6168 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6169 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6170 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6171 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6172 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6173 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6174 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6175 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6176 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6177 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6178 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6179 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6180 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6181 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6182 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6183 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6184 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6185 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6186 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6187 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6188 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6189 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6190 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6191 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6192 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6193 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6194 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6195 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6196 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6197 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6198 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6199 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6200 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6201 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6202 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6203 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6204 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6205 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6206 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6207 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6208 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6209 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6210 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6211 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6212 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6213 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6214 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6215 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6216 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6217 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6218 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6219 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6220 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6221 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6222 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6223 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6224 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6225 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6226 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6227 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6228 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6229 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6230 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6231 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6232 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6233 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6234 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6235 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6236 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6237 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6238 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6239 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6240 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6241 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6242 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6243 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6244 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6245 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6246 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6247 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6248 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6249 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6250 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6251 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6252 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6253 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6254 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6255 |
| 308 | 6256 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6257 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6258 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6259 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6260 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6261 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6262 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6263 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6264 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6265 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6266 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6267 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6268 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6269 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6270 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6271 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6272 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6273 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6274 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6275 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6276 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6277 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6278 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6279 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6280 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6281 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6282 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6283 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6284 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6285 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6286 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6287 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6288 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6289 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6290 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6291 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6292 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6293 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6294 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6295 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6296 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6297 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6298 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6299 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6300 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6301 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6302 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6303 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6304 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6305 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6306 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6307 |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6308 def test_modify_need_force_to_change_uids(self): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6309 def Modify(level, resourceId, replaceTags, force, keepSource): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6310 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6311 'Replace' : replaceTags, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6312 'Force': force, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6313 'KeepSource' : keepSource |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6314 }) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6315 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6316 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6317 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6318 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6319 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6320 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6321 # can not change the StudyInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6322 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6323 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6324 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6325 # can not change the SeriesInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6326 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6327 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6328 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6329 # can not change the SOPInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6330 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6331 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6332 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6333 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6334 # can not change the PatientID of a study unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6335 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6336 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6337 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6338 |
| 500 | 6339 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6340 # this was forbidden even with Force=true till 1.11.2 included |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6341 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6342 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6343 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6344 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6345 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6346 def test_modify_study_module_reconstruction(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6347 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6348 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6349 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6350 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6351 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6352 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6353 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6354 UploadFolder(_REMOTE, 'Knee/T2') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6355 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6356 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6357 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6358 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6359 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6360 'Replace' : replaceTags, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6361 'Force': force, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6362 'KeepSource' : keepSource |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6363 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6364 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6365 return (modifyResponse, modifiedResource) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6366 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6367 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6368 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6369 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6370 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6371 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6372 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6373 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6374 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6375 ####### study level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6376 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6377 # modify study description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6378 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6379 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6380 'StudyDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6381 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6382 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6383 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6384 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6385 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6386 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6387 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6388 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6389 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6390 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6391 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6392 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6393 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6394 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6395 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6396 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6397 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6398 'PatientID': 'TOTO_ID', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6399 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6400 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6401 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6402 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6403 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6404 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6405 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6406 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6407 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6408 ####### series level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6409 # modify series description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6410 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6411 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6412 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6413 'SeriesDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6414 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6415 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6416 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6417 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6418 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6419 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6420 def test_rename_patient_with_multiple_studies(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6421 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6422 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6423 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6424 patientDicomId = 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6425 patientName = 'Test' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6426 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6427 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6428 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6429 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6430 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6431 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6432 # each sub-test is in a dedicated 'if' for clarity |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6433 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6434 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6435 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6436 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6437 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6438 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6439 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6440 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6441 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6442 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6443 # rename the patient (at patient level) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6444 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6445 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6446 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6447 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6448 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6449 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6450 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6451 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6452 # make sure the patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6453 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6454 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6455 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6456 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6457 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6458 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6459 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6460 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6461 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6462 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6463 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6464 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6465 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6466 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6467 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6468 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6469 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6470 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6471 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6472 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6473 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6474 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6475 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6476 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6477 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6478 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6479 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6480 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6481 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6482 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6483 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6484 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6485 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6486 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6487 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6488 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6489 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6490 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6491 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6492 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6493 # would have the same orthanc ids as the source ids -> they would be deleted |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6494 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6495 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6496 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6497 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6498 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6499 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6500 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6501 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6502 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6503 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6504 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6505 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6506 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6507 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6508 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6509 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6510 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6511 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6512 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6513 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6514 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6515 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6516 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6517 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6518 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6519 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6520 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6521 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6522 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6523 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6524 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6525 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6526 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6527 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6528 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6529 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6530 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6531 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6532 # try to attach the knee study to an existing patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6533 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6534 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6535 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6536 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6537 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6538 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6539 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6540 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6541 # this should fail if only specifying the PatientID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6542 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6543 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6544 'PatientID': 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6545 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6546 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6547 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6548 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6549 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6550 # this should fail if specifying all tags but one of them is not correct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6551 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6552 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6553 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6554 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6555 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6556 'PatientSex': 'F' # this is wrong ! |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6557 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6558 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6559 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6560 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6561 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6562 # this should fail if specifying a tag that is not defined in DB for that patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6563 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6564 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6565 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6566 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6567 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6568 'PatientSex': 'M', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6569 '0010,1000': 'TUTU' # this does not exist in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6570 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6571 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6572 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6573 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6574 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6575 # this should now work with all correct tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6576 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6577 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6578 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6579 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6580 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6581 'PatientSex': 'M' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6582 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6583 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6584 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6585 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6586 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6587 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6588 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6589 # make sure tha patient name remains the same at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6590 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6591 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6592 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6593 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6594 # try to edit patient in Knee (only study from this patient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6595 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6596 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6597 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6598 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6599 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6600 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6601 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6602 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6603 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6604 # try to change the PatientName and StudyDescription at study level. |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6605 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6606 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6607 'PatientName': 'Test Knee', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6608 'StudyDescription': 'Knee study' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6609 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6610 'Keep': ['StudyInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6611 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6612 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6613 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6614 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6615 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6616 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6617 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6618 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6619 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6620 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6621 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6622 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6623 'PatientName': 'Test Knee 2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6624 'PatientID': 'TEST_KNEE_2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6625 'StudyDescription': 'Knee study 2' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6626 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6627 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6628 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6629 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6630 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6631 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6632 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6633 # reload the patient, now, its orthanc id has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6634 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6635 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6636 # the previous patient shall not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6637 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6638 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6639 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6640 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6641 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6642 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6643 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6644 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6645 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6646 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6647 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6648 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6649 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6650 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6651 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6652 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6653 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6654 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6655 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6656 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
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6657 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
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6658 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
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6659 ] |
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6660 |
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6661 for syntax in SYNTAXES: |
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6662 body = { |
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6663 'Resources' : [ i ], |
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6664 } |
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6665 |
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6666 if syntax != '1.2.840.10008.1.2.1': |
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6667 body['Transcode'] = syntax |
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6668 |
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6669 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6670 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6671 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
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6672 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6673 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6674 self.assertEqual(syntax, GetTransferSyntax( |
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6675 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
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6676 |
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|
6677 DropOrthanc(_LOCAL) |
| 308 | 6678 |
| 6679 | |
| 295 | 6680 def test_getscu(self): |
| 307 | 6681 def CleanTarget(): |
| 6682 if os.path.isdir('/tmp/GETSCU'): | |
| 6683 shutil.rmtree('/tmp/GETSCU') | |
| 6684 os.makedirs('/tmp/GETSCU') | |
| 6685 | |
|
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6686 env = {} |
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6687 if _DOCKER: |
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6688 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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6689 # and running in a GNU/Linux distribution running DCMTK |
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6690 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
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6691 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
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6692 |
| 295 | 6693 # no transcoding required |
| 307 | 6694 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6695 | |
| 6696 CleanTarget() | |
| 295 | 6697 |
|
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6698 subprocess.check_call([ |
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6699 FindExecutable('getscu'), |
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6700 _REMOTE['Server'], |
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6701 str(_REMOTE['DicomPort']), |
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|
6702 '-aec', 'ORTHANC', |
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|
6703 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6704 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
6705 '-k', '0008,0052=STUDY', |
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|
6706 '--output-directory', '/tmp/GETSCU/' |
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|
6707 ], env = env) |
| 295 | 6708 |
| 311 | 6709 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6710 self.assertTrue(os.path.isfile(f1)) | |
| 6711 with open(f1, 'rb') as f: | |
| 6712 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6713 | |
| 307 | 6714 CleanTarget() |
| 295 | 6715 |
| 6716 # transcoding required | |
| 311 | 6717 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6718 |
| 6719 subprocess.check_call([ | |
| 6720 FindExecutable('getscu'), | |
| 6721 _REMOTE['Server'], | |
| 6722 str(_REMOTE['DicomPort']), | |
| 6723 '-aec', 'ORTHANC', | |
| 6724 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6725 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6726 '-k', '0008,0052=STUDY', |
| 6727 '--output-directory', '/tmp/GETSCU/' | |
| 6728 ], env = env) | |
| 6729 | |
| 311 | 6730 self.assertTrue(os.path.isfile(f1)) |
| 6731 with open(f1, 'rb') as f: | |
| 6732 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6733 | |
| 6734 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6735 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6736 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6737 self.assertTrue(os.path.isfile(f2)) | |
| 6738 with open(f2, 'rb') as f: | |
| 6739 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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|
6740 |
|
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|
6741 |
|
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|
6742 def test_findscu_truncation(self): |
|
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|
6743 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
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|
6744 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
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|
6745 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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|
6746 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
6747 |
|
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|
6748 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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|
6749 |
|
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|
6750 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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|
6751 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6752 self.assertEqual(2, len(result)) |
|
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|
6753 |
|
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|
6754 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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|
6755 # study, leading to a string of 249 characters |
|
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|
6756 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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|
6757 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
|
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|
6758 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6759 self.assertEqual(1, len(result)) |
|
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diff
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|
6760 |
|
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|
6761 # The "StudyInstanceUID" is set as a list of 6 times the same |
|
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|
6762 # study, leading to a string of 299 characters. In Orthanc <= |
|
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|
6763 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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6764 # == 256, and is thus wiped out by C-FIND SCP. As a |
|
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|
6765 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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|
6766 # "StudyInstanceUID" and returns all the available |
|
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|
6767 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
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6768 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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6769 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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|
6770 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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|
6771 self.assertEqual(1, len(result)) |
|
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|
6772 |
|
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|
6773 |
|
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|
6774 def test_store_compressed(self): |
|
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6775 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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6776 dicom = f.read() |
|
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|
6777 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
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|
6778 sourceSize = len(dicom) |
|
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|
6779 |
|
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|
6780 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
6781 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
6782 |
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6783 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
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|
6784 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
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6785 _REMOTE, '/peers/peer/store', { |
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6786 'Resources' : [ i ], |
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6787 'Synchronous' : False, |
|
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6788 })) |
|
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|
6789 |
|
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|
6790 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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6791 self.assertFalse(job['Content']['Compress']) |
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6792 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
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|
6793 self.assertEqual(str(sourceSize), job['Content']['Size']) |
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|
6794 |
|
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6795 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6796 DropOrthanc(_LOCAL) |
|
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6797 |
|
509
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|
6798 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
6799 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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|
6800 # Not supported by Orthanc 0.8.6 => failure |
|
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|
6801 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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|
6802 'Resources' : [ i ], |
|
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|
6803 'Compress' : True, |
|
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|
6804 })) |
|
509
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|
6805 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6806 |
|
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|
6807 # Sending to the tested remote server, with compression: OK |
|
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|
6808 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
6809 _REMOTE, '/peers/self/store', { |
|
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|
6810 'Resources' : [ i ], |
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|
6811 'Compress' : True, |
|
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|
6812 'Synchronous' : False, |
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|
6813 })) |
|
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changeset
|
6814 |
|
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|
6815 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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|
6816 self.assertTrue(job['Content']['Compress']) |
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|
6817 |
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|
6818 # Compression must have divided the size of the sent data at least twice |
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|
6819 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6820 |
| 6821 | |
| 6822 def test_move_ambra(self): | |
| 6823 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6824 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6825 | |
| 6826 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6827 | |
| 6828 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6829 '--study', | |
| 6830 '-k', 'StudyInstanceUID=' | |
| 6831 ]))) | |
| 6832 | |
| 6833 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6834 '--study', | |
| 6835 '-k', 'AccessionNumber=', | |
| 6836 ]))) | |
| 6837 | |
| 6838 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6839 '--study', | |
| 6840 '-k', 'AccessionNumber=', | |
| 6841 '-k', 'StudyInstanceUID=' | |
| 6842 ]))) | |
| 6843 | |
| 6844 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6845 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6846 '--study', | |
| 6847 '-k', 'AccessionNumber=CT16000988', | |
| 6848 '-k', 'StudyInstanceUID=', | |
| 6849 ]))) | |
| 6850 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6851 DropOrthanc(_LOCAL) | |
| 6852 | |
| 6853 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6854 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6855 '--study', | |
| 6856 '-k', 'AccessionNumber=CT16000988', | |
| 6857 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6858 ]))) | |
| 6859 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6860 DropOrthanc(_LOCAL) | |
| 6861 | |
| 6862 # This fails on Orthanc <= 1.7.3 | |
| 6863 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6864 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6865 '--study', | |
| 6866 '-k', 'AccessionNumber=', | |
| 6867 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6868 ]))) | |
| 6869 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6870 DropOrthanc(_LOCAL) | |
|
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|
6871 |
|
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|
6872 |
|
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|
6873 def test_decode_elscint(self): |
|
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|
6874 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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|
6875 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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|
6876 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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|
6877 |
|
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|
6878 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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|
6879 self.assertEqual("L", im.mode) |
|
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|
6880 self.assertEqual(512, im.size[0]) |
|
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|
6881 self.assertEqual(512, im.size[1]) |
|
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|
6882 |
|
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changeset
|
6883 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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|
6884 self.assertEqual("L", im.mode) |
|
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|
6885 self.assertEqual(512, im.size[0]) |
|
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|
6886 self.assertEqual(512, im.size[1]) |
|
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|
6887 |
|
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changeset
|
6888 # The two tests below fail on Orthanc <= 1.7.3 |
|
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|
6889 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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|
6890 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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changeset
|
6891 |
|
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diff
changeset
|
6892 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
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changeset
|
6893 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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|
6894 |
|
334
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diff
changeset
|
6895 |
|
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|
6896 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
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|
6897 # Problem reported by Alain Mazy on 2020-09-15 |
|
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|
6898 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
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|
6899 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
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|
6900 |
|
335
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|
6901 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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|
6902 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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|
6903 self.assertEqual(1, len(modalitiesInStudy)) |
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|
6904 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
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|
6905 |
|
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diff
changeset
|
6906 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
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|
6907 # The empty string '' corresponds to universal matching. |
|
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|
6908 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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|
6909 |
|
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changeset
|
6910 if i in [ 'UX', 'UX\\MR' ]: |
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|
6911 expected = 0 |
|
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|
6912 else: |
|
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|
6913 expected = 1 |
|
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|
6914 |
|
334
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changeset
|
6915 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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|
6916 'Query' : { 'ModalitiesInStudy' : i }}) |
|
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|
6917 self.assertEqual(expected, len(a)) |
|
334
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|
6918 |
|
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diff
changeset
|
6919 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
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|
6920 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6921 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
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|
6922 |
|
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changeset
|
6923 |
|
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changeset
|
6924 def test_webdav(self): |
|
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|
6925 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
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|
6926 |
|
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|
6927 for suffix in [ '', '/' ]: |
|
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|
6928 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
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|
6929 self.assertEqual(1, len(f)) |
|
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|
6930 self.assertTrue('/webdav/' in f.keys()) |
|
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|
6931 self.assertTrue(f['/webdav/']['folder']) |
|
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|
6932 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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changeset
|
6933 |
|
bf8369ea3ff1
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diff
changeset
|
6934 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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diff
changeset
|
6935 self.assertEqual(6, len(f)) |
|
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changeset
|
6936 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
6937 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6938 |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6939 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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diff
changeset
|
6940 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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diff
changeset
|
6941 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
6942 |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6943 for depth in [ 0, 1 ]: |
|
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parents:
341
diff
changeset
|
6944 for suffix2 in [ '', '/' ]: |
|
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341
diff
changeset
|
6945 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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more tests of webdav
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diff
changeset
|
6946 |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6947 if i == 'uploads': |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6948 # Empty folders might still exist in "/uploads/" |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6949 self.assertTrue('/webdav/uploads/' in g) |
|
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more tests of webdav
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parents:
341
diff
changeset
|
6950 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6951 for j in g.items(): |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6952 self.assertTrue(g.items()[0][1]['folder']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6953 else: |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6954 self.assertEqual(1, len(g)) |
|
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parents:
341
diff
changeset
|
6955 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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parents:
341
diff
changeset
|
6956 self.assertTrue(g.items()[0][1]['folder']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6957 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6958 |
|
342
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6959 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
bf8369ea3ff1
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parents:
341
diff
changeset
|
6960 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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341
diff
changeset
|
6961 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
bf8369ea3ff1
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parents:
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diff
changeset
|
6962 |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6963 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6964 time.sleep(0.01) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6965 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6966 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6967 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6968 def test_log_categories(self): |
| 350 | 6969 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6970 |
| 350 | 6971 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6972 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6973 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6974 |
| 350 | 6975 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6976 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6977 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6978 |
| 350 | 6979 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6980 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6981 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6982 |
| 350 | 6983 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6984 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6985 # Switch back to the original log level |
| 350 | 6986 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6987 | |
| 6988 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6989 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6990 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6991 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6992 |
| 6993 | |
| 6994 def test_upload_zip(self): | |
| 6995 f = StringIO() | |
| 6996 with zipfile.ZipFile(f, 'w') as z: | |
| 6997 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6998 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6999 c = g.read() | |
| 7000 z.writestr('hello/world/dicom1.dcm', c) | |
| 7001 z.writestr('hello/world/dicom2.dcm', c) | |
| 7002 | |
| 7003 f.seek(0) | |
| 7004 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 7005 | |
| 7006 self.assertEqual(2, len(i)) | |
| 7007 self.assertEqual(i[0], i[1]) | |
| 7008 self.assertEqual(6, len(i[0])) | |
| 7009 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 7010 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 7011 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 7012 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 7013 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 7014 | |
| 7015 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 7016 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7017 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7018 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7019 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7020 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7021 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7022 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7023 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7024 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7025 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7026 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7027 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7028 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7029 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7030 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7031 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7032 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7033 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7034 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7035 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7036 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7037 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7038 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7039 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7040 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7041 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7042 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7043 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7044 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7045 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7046 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7047 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7048 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7049 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
7050 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7051 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
7052 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7053 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7054 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7055 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7056 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7057 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7058 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
7059 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7060 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7061 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7062 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7063 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7064 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7065 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7066 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7067 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7068 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7069 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7070 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7071 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7072 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7073 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7074 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7075 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7076 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7077 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7078 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7079 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7080 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7081 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7082 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7083 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7084 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7085 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7086 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7087 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7088 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7089 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7090 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7091 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7092 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7093 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7094 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7095 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7096 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7097 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7098 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7099 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7100 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7101 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7102 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7103 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7104 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7105 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7106 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7107 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7108 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7109 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7110 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7111 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7112 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7113 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7114 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7115 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7116 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7117 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7118 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7119 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7120 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7121 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7122 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7123 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7124 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7125 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7126 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7127 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7128 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7129 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7130 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7131 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7132 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7133 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7134 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7135 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7136 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7137 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7138 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7139 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7140 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7141 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7142 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7143 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7144 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7145 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7146 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 6): |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7147 self.assertEqual(3, len(peer)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7148 self.assertEqual(5, peer['DatabaseVersion']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7149 self.assertEqual('MyOrthanc', peer['Name']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7150 self.assertEqual('0.8.6', peer['Version']) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7151 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7152 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7153 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7154 |
|
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|
7155 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
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|
7156 # "ParentStudy", "ParentSeries" are not reported |
|
509
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Alain Mazy <am@osimis.io>
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diff
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|
7157 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
7158 self.assertEqual(3, len(j)) |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
7159 else: |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7160 self.assertEqual(6, len(j)) |
|
382
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|
7161 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
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added test_peer_store_straight
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|
7162 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
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added test_peer_store_straight
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|
7163 self.assertEqual('Success', j['Status']) |
|
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added test_peer_store_straight
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diff
changeset
|
7164 |
|
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added test_peer_store_straight
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|
7165 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
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|
7166 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 7167 |
| 7168 | |
| 7169 def test_cp246(self): | |
| 7170 # This fails on Orthanc <= 1.9.0 | |
| 7171 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 7172 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 7173 | |
| 7174 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 7175 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 7176 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 7177 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 7178 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 7179 | |
| 7180 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 7181 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 7182 | |
| 7183 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 7184 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 7185 | |
| 7186 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 7187 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 7188 | |
|
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390
diff
changeset
|
7189 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
7190 def test_revisions_metadata(self): |
|
391
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diff
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|
7191 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
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diff
changeset
|
7192 # was introduced in 1.9.2), or if configuration option |
|
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diff
changeset
|
7193 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
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diff
changeset
|
7194 # related to revisions mimic CouchDB: |
|
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diff
changeset
|
7195 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
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diff
changeset
|
7196 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
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diff
changeset
|
7197 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7198 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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diff
changeset
|
7199 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7200 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
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diff
changeset
|
7201 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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diff
changeset
|
7202 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7203 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7204 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7205 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7206 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7207 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7208 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7209 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7210 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7211 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7212 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7213 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7214 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7215 }) |
|
227d9a932467
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390
diff
changeset
|
7216 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7217 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7218 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7219 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7220 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7221 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7222 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7223 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7224 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7225 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7226 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7227 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7228 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7229 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7230 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7231 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7232 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7233 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7234 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7235 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7236 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7237 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7238 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7239 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7240 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7241 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7242 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7243 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7244 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7245 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7246 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7247 self.assertEqual('hello', body) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7248 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7249 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7250 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7251 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7252 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7253 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7254 self.assertEqual('', body) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7255 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7256 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
7257 'If-None-Match' : '"1-tata"' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7258 }) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7259 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7260 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7261 self.assertEqual('hello', body) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7262 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7263 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7264 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7265 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7266 |
|
227d9a932467
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390
diff
changeset
|
7267 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7268 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7269 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7270 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7271 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7272 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7273 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7274 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7275 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7276 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7277 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7278 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7279 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7280 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7281 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7282 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7283 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7284 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7285 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7286 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7287 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7288 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7289 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7290 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7291 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7292 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7293 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7294 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7295 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7296 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7297 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7298 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7299 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7300 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7301 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7302 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7303 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7304 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7305 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7306 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7307 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7308 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7309 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7310 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7311 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7312 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7313 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7314 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7315 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7316 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7317 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7318 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7319 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7320 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7321 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7322 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7323 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7324 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7325 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7326 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7327 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7328 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7329 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7330 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7331 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7332 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7333 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7334 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7335 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7336 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7337 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7338 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7339 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7340 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7341 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7342 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7343 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7344 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7345 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7346 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7347 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7348 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7349 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7350 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7351 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7352 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7353 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7354 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7355 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7356 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7357 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7358 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7359 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7360 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7361 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7362 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7363 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7364 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7365 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7366 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7367 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7368 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7369 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7370 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7371 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7372 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7373 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7374 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7375 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7376 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7377 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7378 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7379 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7380 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7381 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7382 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7383 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7384 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7385 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7386 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7387 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7388 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7389 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7390 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7391 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7392 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7393 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7394 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7395 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7396 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7397 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7398 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7399 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7400 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7401 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7402 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7403 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7404 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7405 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7406 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7407 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7408 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7409 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7410 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7411 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7412 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7413 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7414 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7415 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7416 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7417 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7418 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7419 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7420 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7421 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7422 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7423 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7424 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7425 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7426 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7427 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7428 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7429 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7430 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7431 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7432 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7433 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7434 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7435 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7436 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7437 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7438 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7439 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7440 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7441 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7442 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7443 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7444 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7445 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7446 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7447 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7448 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7449 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7450 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7451 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7452 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7453 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7454 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7455 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7456 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7457 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7458 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7459 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7460 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7461 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7462 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7463 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7464 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7465 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7466 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7467 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7468 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7469 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7470 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7471 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7472 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7473 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7474 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7475 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7476 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7477 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7478 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7479 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7480 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7481 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7482 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7483 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7484 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7485 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7486 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7487 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7488 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7489 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7490 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7491 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7492 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7493 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7494 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7495 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7496 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7497 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7498 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7499 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7500 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7501 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7502 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7503 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7504 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7505 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7506 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7507 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7508 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7509 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7510 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7511 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7512 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7513 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7514 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7515 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7516 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7517 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7518 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7519 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7520 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7521 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7522 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7523 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7524 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7525 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7526 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7527 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7528 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7529 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7530 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7531 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7532 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7533 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7534 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7535 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7536 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7537 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7538 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7539 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7540 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7541 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7542 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7543 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7544 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7545 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7546 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7547 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7548 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7549 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7550 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7551 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7552 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7553 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7554 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7555 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7556 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7557 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7558 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7559 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7560 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7561 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7562 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7563 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7564 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7565 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7566 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7567 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7568 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7569 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7570 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7571 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7572 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7573 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7574 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7575 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7576 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7577 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7578 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7579 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7580 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7581 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7582 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7583 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7584 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7585 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7586 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7587 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7588 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7589 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7590 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7591 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7592 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7593 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7594 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7595 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7596 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7597 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7598 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7599 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7600 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7601 |
| 7602 | |
| 7603 def test_issue_146(self): | |
| 7604 # "Update Anonyization to 2019c" | |
| 7605 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7606 | |
| 7607 def GetTags(study, params): | |
| 7608 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7609 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7610 self.assertEqual(1, len(b)) | |
| 7611 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7612 | |
| 7613 | |
| 7614 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7615 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7616 | |
| 7617 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7618 | |
| 7619 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7620 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7621 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7622 tagsDefault = GetTags(study, {}) | |
| 7623 | |
| 420 | 7624 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7625 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7626 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7627 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7628 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7629 | |
| 7630 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7631 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7632 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7633 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7634 self.assertEqual('YES', t['0012,0062']) | |
| 7635 | |
| 7636 for t in [ tags2008 ]: | |
| 7637 self.assertEqual('20200101', t['0008,0020']) | |
| 7638 | |
| 7639 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7640 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7641 | |
| 7642 for t in [ tags2008, tags2017c ]: | |
| 7643 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7644 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7645 | |
| 7646 for t in [ tags2021b, tagsDefault ]: | |
| 7647 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7648 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7649 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7650 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7651 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7652 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7653 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7654 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7655 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7656 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7657 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7658 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7659 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7660 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7661 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7662 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7663 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7664 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7665 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7666 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7667 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7668 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7669 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7670 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7671 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7672 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7673 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7674 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7675 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7676 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7677 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7678 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7679 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7680 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7681 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7682 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7683 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7684 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7685 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7686 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7687 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7688 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7689 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7690 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7691 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7692 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7693 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7694 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7695 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7696 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7697 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7698 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7699 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7700 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7701 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7702 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7703 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7704 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7705 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7706 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7707 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7708 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7709 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7710 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7711 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7712 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7713 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7714 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7715 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7716 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7717 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7718 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7719 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7720 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7721 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7722 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7723 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7724 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7725 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7726 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7727 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7728 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7729 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7730 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7731 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7732 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7733 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7734 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7735 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7736 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7737 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7738 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7739 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7740 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7741 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7742 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7743 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7744 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7745 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7746 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7747 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7748 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7749 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7750 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7751 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7752 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7753 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7754 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7755 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7756 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7757 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7758 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7759 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7760 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7761 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7762 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7763 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7764 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7765 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7766 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7767 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7768 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7769 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7770 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7771 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7772 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7773 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7774 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7775 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7776 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7777 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7778 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7779 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7780 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7781 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7782 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7783 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7784 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7785 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7786 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7787 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7788 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7789 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7790 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7791 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7792 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7793 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7794 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7795 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7796 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7797 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7798 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7799 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7800 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7801 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7802 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7803 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7804 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7805 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7806 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7807 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7808 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7809 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7810 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7811 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7812 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7813 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7814 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7815 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7816 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7817 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7818 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7819 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7820 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7821 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7822 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7823 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7824 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7825 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7826 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7827 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7828 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7829 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7830 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7831 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7832 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7833 |
| 7834 | |
| 7835 def test_bulk_modify(self): | |
| 7836 # New in Orthanc 1.9.4 | |
| 7837 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7838 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7839 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7840 if expectedCount != None: |
| 7841 self.assertEqual(expectedCount, len(m)) | |
| 7842 return m | |
| 7843 | |
| 7844 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7845 series = DoGet(_REMOTE, '/series') [0] | |
| 7846 study = DoGet(_REMOTE, '/studies') [0] | |
| 7847 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7848 | |
| 7849 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7850 'Resources' : [ instance ] | |
| 7851 }) | |
| 7852 | |
| 7853 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7854 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7855 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7856 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7857 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7858 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7859 'Resources' : [ instance ] |
| 7860 }) | |
| 7861 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7862 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7863 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7864 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7865 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7866 |
| 7867 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7868 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7869 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7870 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7871 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7872 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7873 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7874 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7875 |
| 410 | 7876 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7877 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7878 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7879 | |
| 7880 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7881 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7882 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7883 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7884 | |
| 7885 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7886 'Resources' : [ knee1, brainix ] | |
| 7887 }) | |
| 7888 | |
| 7889 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7890 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7891 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7892 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7893 | |
| 7894 for i in GetModified(a, 'Instance', 2): | |
| 7895 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7896 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7897 | |
| 7898 b = GetModified(a, 'Series', 2) | |
| 7899 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7900 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7901 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7902 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7903 | |
| 7904 b = GetModified(a, 'Study', 2) | |
| 7905 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7906 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7907 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7908 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7909 | |
| 7910 b = GetModified(a, 'Patient', 2) | |
| 7911 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7912 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7913 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7914 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7915 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7916 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7917 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7918 }) |
| 410 | 7919 |
| 7920 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7921 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7922 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7923 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7924 self.assertEqual(4, len(sourceInstances)) | |
| 7925 self.assertEqual(4, len(sourceSeries)) | |
| 7926 self.assertEqual(3, len(sourceStudies)) | |
| 7927 self.assertEqual(3, len(sourcePatients)) | |
| 7928 | |
| 7929 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7930 'Resources' : [ knee1, brainix ] | |
| 7931 }) | |
| 7932 | |
| 7933 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7934 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7935 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7936 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7937 | |
| 7938 for i in GetModified(a, 'Instance', 2): | |
| 7939 self.assertFalse(i in sourceInstances) | |
| 7940 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7941 | |
| 7942 for i in GetModified(a, 'Series', 2): | |
| 7943 self.assertFalse(i in sourceSeries) | |
| 7944 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7945 | |
| 7946 for i in GetModified(a, 'Study', 2): | |
| 7947 self.assertFalse(i in sourceStudies) | |
| 7948 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7949 | |
| 7950 for i in GetModified(a, 'Patient', 2): | |
| 7951 self.assertFalse(i in sourcePatients) | |
| 7952 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7953 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7954 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7955 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7956 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7957 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7958 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7959 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7960 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7961 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7962 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7963 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7964 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7965 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7966 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7967 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7968 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7969 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7970 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7971 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7972 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7973 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7974 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7975 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7976 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7977 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7978 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7979 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7980 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7981 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7982 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7983 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7984 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7985 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7986 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7987 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7988 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7989 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7990 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7991 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7992 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7993 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7994 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7995 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7996 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7997 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7998 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7999 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8000 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8001 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8002 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8003 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8004 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8005 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8006 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8007 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8008 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8009 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8010 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8011 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8012 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8013 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8014 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8015 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8016 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8017 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8018 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8019 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8020 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8021 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8022 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8023 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8024 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8025 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8026 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8027 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8028 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8029 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8030 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8031 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8032 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8033 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8034 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8035 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8036 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8037 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8038 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8039 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8040 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8041 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8042 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8043 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8044 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8045 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8046 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8047 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8048 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8049 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8050 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8051 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8052 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8053 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8054 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8055 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8056 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8057 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8058 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8059 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8060 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8061 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8062 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8063 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8064 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8065 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8066 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8067 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8068 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8069 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8070 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8071 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8072 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8073 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8074 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8075 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8076 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8077 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8078 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8079 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8080 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8081 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8082 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8083 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8084 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8085 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8086 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8087 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8088 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8089 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8090 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8091 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8092 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8093 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8094 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8095 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8096 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8097 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8098 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8099 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8100 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8101 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8102 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8103 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8104 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8105 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8106 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8107 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8108 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8109 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8110 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8111 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8112 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8113 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8114 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8115 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8116 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8117 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8118 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8119 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8120 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8121 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8122 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8123 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8124 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8125 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8126 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8127 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8128 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8129 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8130 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8131 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8132 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8133 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8134 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8135 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8136 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8137 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8138 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8139 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8140 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8141 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8142 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8143 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8144 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8145 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8146 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8147 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8148 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8149 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8150 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8151 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8152 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8153 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8154 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8155 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8156 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8157 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8158 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8159 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8160 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8161 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8162 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8163 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8164 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8165 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8166 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8167 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8168 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8169 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8170 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8171 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8172 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8173 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8174 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8175 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8176 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8177 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8178 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8179 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8180 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 8181 |
| 8182 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 8183 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 8184 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 8185 | |
| 8186 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 8187 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 8188 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 8189 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 8190 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 8191 | |
| 8192 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 8193 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 8194 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 8195 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 8196 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 8197 | |
| 8198 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 8199 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 8200 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 8201 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 8202 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 8203 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8204 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8205 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8206 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8207 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8208 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8209 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8210 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8211 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8212 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8213 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8214 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8215 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8216 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8217 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8218 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8219 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8220 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8221 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8222 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8223 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8224 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8225 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8226 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8227 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8228 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8229 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8230 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8231 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8232 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8233 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8234 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8235 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8236 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8237 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8238 |
| 415 | 8239 |
| 8240 def test_bulk_content(self): | |
| 8241 # New in Orthanc 1.9.4 | |
| 8242 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 8243 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8244 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8245 | |
| 8246 brainixHierarchy = [ | |
| 8247 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 8248 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 8249 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 8250 brainix, | |
| 8251 ] | |
| 8252 | |
| 8253 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 8254 self.assertEqual(4, len(a)) | |
| 8255 b = map(lambda x: x['ID'], a) | |
| 8256 for i in range(4): | |
| 8257 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8258 self.assertTrue('Metadata' in a[i]) |
| 415 | 8259 |
| 8260 for (level, index) in [ | |
| 8261 ('Patient', 0), | |
| 8262 ('Study', 1), | |
| 8263 ('Series', 2), | |
| 8264 ('Instance', 3), | |
| 8265 ]: | |
| 8266 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 8267 'Level' : level }) | |
| 8268 self.assertEqual(1, len(a)) | |
| 8269 self.assertEqual(level, a[0]['Type']) | |
| 8270 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8271 self.assertTrue('Metadata' in a[0]) |
| 415 | 8272 |
| 8273 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8274 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8275 'Metadata' : False }) |
| 415 | 8276 self.assertEqual(1, len(a)) |
| 8277 self.assertEqual(level, a[0]['Type']) | |
| 8278 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8279 self.assertFalse('Metadata' in a[0]) |
| 415 | 8280 |
| 8281 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 8282 self.assertEqual(3, len(a)) | |
| 8283 for item in a: | |
| 8284 self.assertEqual('Instance', item['Type']) | |
| 8285 b = map(lambda x: x['ID'], a) | |
| 8286 self.assertTrue(knee1 in b) | |
| 8287 self.assertTrue(knee2 in b) | |
| 8288 self.assertTrue(brainix in b) | |
| 8289 | |
| 8290 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 8291 'Level' : 'Series' }) | |
| 8292 self.assertEqual(2, len(a)) | |
| 8293 for item in a: | |
| 8294 self.assertEqual('Series', item['Type']) | |
| 8295 b = map(lambda x: x['ID'], a) | |
| 8296 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 8297 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 8298 | |
| 8299 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8300 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8301 'Metadata' : False }) |
| 415 | 8302 self.assertEqual(1, len(a)) |
| 8303 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 8304 self.assertEqual('Study', a[0]['Type']) | |
| 8305 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8306 self.assertFalse('Metadata' in a[0]) |
| 415 | 8307 |
| 8308 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8309 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8310 'Metadata' : True }) |
| 415 | 8311 self.assertEqual(1, len(a)) |
| 8312 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 8313 self.assertEqual('Patient', a[0]['Type']) | |
| 8314 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8315 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8316 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8317 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8318 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8319 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8320 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8321 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 8322 |
| 8323 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 8324 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 8325 'Level' : level }) | |
| 8326 self.assertEqual(2, len(a)) | |
| 8327 for item in a: | |
| 8328 self.assertEqual(level, item['Type']) | |
| 8329 b = map(lambda x: x['ID'], a) | |
| 8330 if level == 'Instance': | |
| 8331 self.assertTrue(knee1 in b) | |
| 8332 self.assertTrue(brainix in b) | |
| 8333 else: | |
| 8334 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 8335 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8336 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8337 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8338 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8339 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8340 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8341 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8342 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8343 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8344 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8345 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8346 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8347 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8348 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8349 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8350 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8351 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8352 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8353 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8354 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8355 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8356 |
| 417 | 8357 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 8358 'KeepSource' : False | |
| 8359 })) # Neither "Instances", nor "Series" | |
| 8360 | |
| 8361 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8362 'KeepSource' : False, | |
| 8363 'Instances' : [ ], | |
| 8364 'Series' : [ ] | |
| 8365 })) # Empty "Instances" and "Series" | |
| 8366 | |
| 8367 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8368 'Instances' : [ 'nope' ], | |
| 8369 'KeepSource' : False | |
| 8370 })) | |
| 8371 | |
| 8372 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8373 'Series' : [ 'nope' ], | |
| 8374 'KeepSource' : False | |
| 8375 })) | |
| 8376 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8377 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8378 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8379 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8380 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8381 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8382 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8383 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8384 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8385 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8386 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8387 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8388 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8389 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8390 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8391 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8392 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8393 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8394 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8395 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8396 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8397 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8398 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8399 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8400 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8401 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8402 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8403 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8404 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8405 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8406 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8407 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8408 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8409 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8410 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8411 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8412 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8413 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8414 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8415 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8416 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8417 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8418 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8419 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8420 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8421 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8422 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8423 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8424 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8425 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8426 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8427 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8428 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8429 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8430 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8431 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8432 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8433 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8434 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8435 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8436 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8437 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8438 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8439 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8440 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8441 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8442 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8443 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8444 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8445 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8446 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8447 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8448 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8449 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8450 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8451 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8452 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8453 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8454 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8455 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8456 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8457 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8458 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8459 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8460 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8461 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8462 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8463 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8464 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8465 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8466 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8467 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8468 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8469 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8470 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8471 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8472 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8473 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8474 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8475 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8476 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8477 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8478 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8479 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8480 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8481 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8482 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8483 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8484 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8485 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8486 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8487 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8488 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8489 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8490 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8491 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8492 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8493 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8494 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8495 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8496 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8497 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8498 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8499 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8500 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8501 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8502 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8503 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8504 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8505 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8506 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8507 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8508 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8509 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8510 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8511 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8512 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8513 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8514 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8515 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8516 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8517 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8518 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8519 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8520 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8521 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8522 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8523 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8524 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8525 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8526 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8527 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8528 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8529 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8530 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8531 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8532 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8533 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8534 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8535 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8536 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8537 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8538 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8539 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8540 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8541 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8542 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8543 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8544 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8545 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8546 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8547 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8548 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8549 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8550 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8551 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8552 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8553 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8554 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8555 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8556 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8557 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8558 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8559 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8560 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8561 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8562 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8563 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8564 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8565 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8566 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8567 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8568 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8569 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8570 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8571 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8572 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8573 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8574 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8575 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8576 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8577 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8578 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8579 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8580 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8581 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8582 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8583 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8584 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8585 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8586 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8587 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8588 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8589 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8590 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8591 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8592 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8593 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8594 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8595 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8596 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8597 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8598 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8599 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8600 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8601 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8602 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8603 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8604 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8605 |
| 8606 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8607 self.assertEqual(1, len(last)) | |
| 8608 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8609 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8610 |
| 8611 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8612 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8613 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8614 | |
| 8615 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8616 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8617 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8618 | |
| 8619 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8620 self.assertEqual(1, len(last)) | |
| 8621 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8622 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8623 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8624 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8625 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8626 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8627 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8628 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8629 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8630 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8631 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8632 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8633 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8634 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8635 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8636 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8637 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8638 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8639 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8640 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8641 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8642 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8643 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8644 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8645 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8646 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8647 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8648 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8649 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8650 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8651 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8652 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8653 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8654 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8655 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8656 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8657 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8658 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8659 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8660 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8661 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8662 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8663 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8664 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8665 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8666 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8667 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8668 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8669 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8670 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8671 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8672 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8673 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8674 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8675 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8676 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8677 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8678 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8679 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8680 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8681 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8682 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8683 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8684 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8685 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8686 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8687 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8688 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8689 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8690 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8691 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8692 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8693 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8694 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8695 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8696 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8697 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8698 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8699 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8700 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8701 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8702 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8703 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8704 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8705 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8706 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8707 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8708 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8709 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8710 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8711 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8712 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8713 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8714 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8715 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8716 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8717 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8718 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8719 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8720 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8721 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8722 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8723 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8724 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8725 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8726 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8727 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8728 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8729 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8730 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8731 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8732 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8733 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8734 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8735 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8736 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8737 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8738 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8739 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8740 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8741 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8742 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8743 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8744 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8745 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8746 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8747 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8748 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8749 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8750 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8751 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8752 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8753 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8754 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8755 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8756 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8757 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8758 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8759 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8760 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8761 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8762 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8763 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8764 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8765 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8766 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8767 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8768 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8769 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8770 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8771 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8772 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8773 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8774 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8775 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8776 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8777 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8778 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8779 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8780 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8781 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8782 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8783 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8784 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8785 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8786 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8787 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8788 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8789 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8790 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8791 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8792 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8793 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8794 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8795 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8796 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8797 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8798 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8799 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8800 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8801 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8802 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8803 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8804 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8805 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8806 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8807 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8808 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8809 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8810 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8811 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8812 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8813 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8814 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8815 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8816 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8817 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8818 |
| 8819 | |
| 8820 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8821 # New in Orthanc 1.10.0 |
| 440 | 8822 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 8823 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8824 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8825 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 8826 |
| 8827 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8828 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8829 self.assertEqual(numpy.float32, c.dtype) | |
| 8830 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8831 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8832 self.assertAlmostEqual(536, c.max()) |
| 440 | 8833 |
| 8834 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8835 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8836 self.assertEqual(numpy.uint16, c.dtype) | |
| 8837 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8838 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8839 self.assertEqual(536, c.max()) |
| 440 | 8840 |
| 8841 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8842 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8843 self.assertEqual(numpy.float32, c.dtype) | |
| 8844 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8845 | |
| 8846 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8847 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8848 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8849 self.assertEqual(numpy.float32, c.dtype) | |
| 8850 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8851 | |
| 8852 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8853 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8854 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8855 self.assertEqual(numpy.float32, c.dtype) | |
| 8856 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8857 | |
| 8858 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8859 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8860 self.assertEqual(1, len(c.files)) | |
| 8861 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8862 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8863 | |
| 8864 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8865 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8866 self.assertEqual(numpy.float32, c.dtype) | |
| 8867 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8868 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8869 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8870 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8871 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8872 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8873 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8874 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8875 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8876 self.assertAlmostEqual(255, c.max()) |
| 440 | 8877 |
| 8878 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8879 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8880 self.assertEqual(numpy.float32, c.dtype) | |
| 8881 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8882 | |
| 8883 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8884 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8885 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8886 self.assertEqual(numpy.float32, c.dtype) | |
| 8887 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8888 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8889 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8890 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8891 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8892 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8893 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8894 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8895 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8896 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8897 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8898 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8899 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8900 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8901 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8902 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8903 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8904 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8905 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8906 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8907 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8908 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8909 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8910 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8911 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8912 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8913 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8914 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8915 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8916 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8917 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8918 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8919 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8920 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8921 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8922 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8923 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8924 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8925 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8926 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8927 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8928 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8929 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8930 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8931 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8932 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8933 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8934 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8935 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8936 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8937 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8938 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8939 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8940 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8941 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8942 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8943 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8944 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8945 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8946 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8947 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8948 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8949 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8950 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8951 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8952 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8953 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8954 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8955 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8956 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8957 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8958 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8959 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8960 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8961 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8962 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8963 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8964 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8965 def test_rest_find_requested_tags(self): |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8966 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
| 471 | 8967 |
| 8968 # Upload instances | |
| 8969 for i in range(2): | |
| 8970 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 8971 | |
| 8972 # Patient level | |
| 8973 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 8974 'CaseSensitive' : False, | |
| 8975 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8976 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
| 471 | 8977 'Expand': True |
| 8978 }) | |
| 8979 self.assertEqual(1, len(a)) | |
| 8980 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8981 self.assertIn('PatientID', a[0]['RequestedTags']) | |
| 8982 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
| 8983 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
| 8984 | |
| 8985 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8986 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
| 8987 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
| 8988 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
| 8989 | |
| 8990 # Study level, request patient tags too | |
| 8991 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 8992 'CaseSensitive' : False, | |
| 8993 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 8994 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
| 8995 'Expand': True | |
| 8996 }) | |
| 8997 self.assertEqual(1, len(a)) | |
| 8998 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8999 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9000 | |
| 9001 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9002 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9003 | |
| 9004 | |
| 9005 # Series level, request patient and study tags too | |
| 9006 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9007 'CaseSensitive' : False, | |
| 9008 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9009 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
| 471 | 9010 'Expand': True |
| 9011 }) | |
| 9012 self.assertEqual(1, len(a)) | |
| 9013 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9014 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9015 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9016 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9017 |
| 9018 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9019 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9020 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9021 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
| 471 | 9022 |
| 9023 | |
| 9024 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
| 9025 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9026 'CaseSensitive' : False, | |
| 9027 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9028 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
| 471 | 9029 'Expand': True |
| 9030 }) | |
| 9031 self.assertEqual(1, len(a)) | |
| 9032 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9033 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9034 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
| 9035 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9036 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9037 |
| 9038 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9039 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9040 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9041 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9042 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9043 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9044 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9045 def test_rest_find_requested_tags_computed_tags(self): |
| 471 | 9046 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9047 # Upload instances | |
| 9048 for i in range(2): | |
| 9049 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9050 | |
| 9051 | |
| 9052 # Patient level | |
| 9053 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9054 'CaseSensitive' : False, | |
| 9055 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9056 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
| 9057 'Expand': True | |
| 9058 }) | |
| 9059 self.assertEqual(1, len(a)) | |
| 9060 | |
| 9061 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9062 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
| 9063 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
| 9064 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
| 9065 | |
| 9066 # Study level | |
| 9067 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9068 'CaseSensitive' : False, | |
| 9069 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9070 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
| 9071 'Expand': True | |
| 9072 }) | |
| 9073 self.assertEqual(1, len(a)) | |
| 9074 | |
| 9075 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9076 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9077 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9078 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9079 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9080 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
| 9081 | |
| 9082 # Series level | |
| 9083 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9084 'CaseSensitive' : False, | |
| 9085 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9086 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
| 9087 'Expand': True | |
| 9088 }) | |
| 9089 self.assertEqual(1, len(a)) | |
| 9090 | |
| 9091 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9092 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9093 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
| 9094 | |
| 9095 # Instance level | |
| 9096 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 9097 'CaseSensitive' : False, | |
| 9098 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9099 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 9100 'Expand': True | |
| 9101 }) | |
| 9102 self.assertEqual(2, len(a)) | |
| 9103 | |
| 9104 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9105 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9106 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 456 | 9107 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9108 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9109 |
| 471 | 9110 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9111 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9112 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9113 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9114 | |
| 9115 # list series and request tags that are not in the default main dicom tags | |
| 9116 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
| 9117 | |
| 9118 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
| 9119 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
| 9120 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9121 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9122 | |
| 9123 # list studies and request patient and studies tags | |
| 9124 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
| 9125 | |
| 9126 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9127 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9128 | |
| 9129 | |
| 9130 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
| 9131 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
| 9132 | |
| 9133 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9134 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9135 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
| 9136 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9137 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
| 9138 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
| 9139 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9140 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9141 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9142 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9143 |
| 471 | 9144 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9145 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9146 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9147 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9148 | |
| 9149 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9150 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
| 9151 | |
| 9152 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9153 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9154 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9155 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9156 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9157 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9158 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9159 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9160 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9161 |
| 471 | 9162 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9163 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9164 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9165 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9166 | |
| 9167 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9168 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
| 9169 | |
| 9170 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9171 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9172 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9173 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9174 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9175 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 9176 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9177 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9178 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9179 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9180 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9181 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9182 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9183 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
|
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9184 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9185 def test_create_png16RBGA(self): |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9186 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9187 png = f.read() |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9188 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9189 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9190 json.dumps({ |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9191 'PatientName' : 'Jodogne', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9192 'Modality' : 'CT', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9193 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9194 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9195 })) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9196 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9197 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9198 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9199 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9200 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9201 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9202 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9203 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9204 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9205 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9206 j = DoGet(_REMOTE, i['Path']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9207 self.assertEqual('Instance', j['Type']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9208 self.assertEqual(j['ID'], i['ID']) |
|
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9209 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9210 def test_storescu_custom_host_ip_port(self): |
| 510 | 9211 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
| 9212 DropOrthanc(_LOCAL) | |
| 9213 DropOrthanc(_REMOTE) | |
| 9214 | |
| 9215 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 9216 | |
| 9217 # upload to self -> orthanctest shall not receive any content | |
| 9218 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9219 'Resources' : [ a['ID']] | |
| 9220 }) | |
| 9221 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 9222 | |
| 9223 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content | |
| 9224 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') | |
| 9225 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9226 'LocalAet' : 'YOP', | |
| 9227 'CalledAet' : c['AET'], | |
| 9228 'Port' : c['Port'], | |
| 9229 'Host' : c['Host'], | |
| 9230 'Resources' : [ a['ID']] | |
| 9231 }) | |
| 9232 | |
| 9233 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 9234 | |
| 9235 DropOrthanc(_REMOTE) | |
| 9236 DropOrthanc(_LOCAL) | |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9237 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9238 def test_rle_planar_configuration(self): |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9239 # This test failed in Orthanc <= 1.11.2 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9240 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9241 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9242 uri = '/instances/%s/preview' % a |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9243 im = GetImage(_REMOTE, uri) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9244 self.assertEqual('RGB', im.mode) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9245 self.assertEqual(1475, im.size[0]) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9246 self.assertEqual(1475, im.size[1]) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9247 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) |
| 512 | 9248 |
| 9249 def test_rest_api_write_to_file_system(self): | |
| 9250 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 9251 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
| 9252 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances/%s/export' % a, '/tmp/test.dcm')) | |
| 513 | 9253 |
|
515
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9254 def test_overwrite_generates_stable_study(self): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9255 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9256 # This test makes sure there are no regression wrt StableStudy when uploading instances in Orthanc |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9257 # The current behaviour (tested from 1.5.7 to 1.12.0) is |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9258 # If you upload 2 instances with a delay > StableAge, you get 2 StableStudy events and they are both listed in /changes |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9259 # If you upload twice the same instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9260 # If you upload an instance and a modified version of this instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9261 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9262 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9263 def GetAllStableStudyChangesIds(studyId, timeout): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9264 # try to be as fast as possible -> stop as soon as we've found a StableStudy event that appeared after we started monitoring |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9265 fromSeq = DoGet(_REMOTE, '/changes')["Last"] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9266 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9267 endTime = time.time() + timeout |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9268 newStableStudyFound = False |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9269 while not newStableStudyFound and time.time() < endTime: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9270 time.sleep(0.1) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9271 changes = DoGet(_REMOTE, '/changes') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9272 stableStudyChangesIds = [] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9273 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9274 for change in changes["Changes"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9275 if change["ChangeType"] == "StableStudy" and studyId == change["ID"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9276 stableStudyChangesIds.append(change["Seq"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9277 if change["Seq"] > fromSeq: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9278 newStableStudyFound = True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9279 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9280 return stableStudyChangesIds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9281 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9282 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9283 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9284 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9285 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9286 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9287 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9288 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9289 # upload the same instance again and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9290 upload1b = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9291 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9292 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9293 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9294 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9295 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9296 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9297 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9298 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9299 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9300 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9301 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9302 # reupload a modified instance in the same study and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9303 modified = DoPost(_REMOTE, '/instances/%s/modify' % upload1["ID"], |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9304 json.dumps({ |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9305 "Replace" : { |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9306 "InstitutionName" : "hello", |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9307 "SOPInstanceUID": "1.2.840.113619.2.176.2025.1499492.7040.1171286241.705" |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9308 }, |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9309 "Force": True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9310 }), |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9311 'application/json') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9312 upload1b = DoPost(_REMOTE, '/instances', modified, 'application/dicom') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9313 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9314 self.assertEqual(upload1["ParentStudy"], upload1b["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9315 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9316 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9317 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9318 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9319 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9320 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9321 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9322 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9323 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9324 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9325 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9326 # upload a new instance in the same study and check a second StableStudy change has been generated with a new id |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9327 upload2 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9328 changes2 = GetAllStableStudyChangesIds(upload2["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9329 self.assertEqual(upload1["ParentStudy"], upload2["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9330 self.assertEqual(2, len(changes2)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9331 self.assertEqual(changes1[0], changes2[0]) |
| 516 | 9332 |
| 513 | 9333 def test_labels(self): |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9334 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9335 DoGet(_REMOTE, '/system') ['HasLabels']): |
| 513 | 9336 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 9337 patient = DoGet(_REMOTE, '/instances/%s/patient' % u) ['ID'] | |
| 9338 study = DoGet(_REMOTE, '/instances/%s/study' % u) ['ID'] | |
| 9339 series = DoGet(_REMOTE, '/instances/%s/series' % u) ['ID'] | |
| 9340 | |
| 9341 for base in [ '/instances/%s' % u, | |
| 9342 '/series/%s' % series, | |
| 9343 '/studies/%s' % study, | |
|
519
b1991073e4d1
test alphanumeric labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
518
diff
changeset
|
9344 '/patients/%s' % patient ]: |
| 521 | 9345 |
| 9346 # no tags by default | |
| 513 | 9347 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 521 | 9348 |
| 9349 # 404 if requesting a tag that does apply for a resource | |
| 513 | 9350 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9351 |
| 9352 # delete a non existing tag does not generate an error | |
| 513 | 9353 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 9354 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 521 | 9355 |
| 9356 # Not an alphanumeric label -> 400 | |
| 9357 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '%s/labels/@' % base)) | |
| 9358 | |
| 9359 # add a tag | |
| 513 | 9360 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9361 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9362 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9363 | |
| 9364 # double tagging does not generate any error | |
| 9365 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) | |
| 9366 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 9367 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 9368 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9369 | |
| 9370 # add a second tag | |
| 9371 self.assertEqual('', DoPut(_REMOTE, '%s/labels/world' % base)) | |
| 9372 self.assertEqual('', DoGet(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9373 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9374 self.assertEqual(2, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9375 self.assertIn(DoGet(_REMOTE, base) ['Labels'][0], ['hello', 'world']) | |
| 9376 self.assertIn(DoGet(_REMOTE, base) ['Labels'][1], ['hello', 'world']) | |
| 9377 | |
| 9378 # list all tags defined in the system (not only on this resource) | |
| 9379 | |
| 9380 # delete the first tag | |
| 513 | 9381 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9382 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9383 self.assertEqual('world', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9384 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 9385 | |
| 9386 # delete the second tag | |
| 9387 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9388 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 521 | 9389 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/world' % base)) |
| 9390 | |
| 9391 # test all valid chars | |
|
519
b1991073e4d1
test alphanumeric labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
518
diff
changeset
|
9392 self.assertEqual('', DoPut(_REMOTE, '%s/labels/abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789_-.' % base)) |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9393 else: |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9394 print("Your database backend doesn't support labels") |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9395 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9396 def test_find_labels(self): |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9397 def Execute(withLabels, withoutLabels): |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9398 return DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9399 'Query' : { }, |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9400 'WithLabels' : withLabels, |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9401 'WithoutLabels' : withoutLabels, }) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9402 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9403 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9404 DoGet(_REMOTE, '/system') ['HasLabels']): |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9405 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9406 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9407 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9408 self.assertEqual(0, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9409 self.assertEqual(0, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9410 self.assertEqual(1, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9411 self.assertEqual(1, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9412 self.assertEqual(0, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9413 self.assertEqual(0, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9414 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9415 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9416 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9417 DoPut(_REMOTE, '/instances/%s/labels/a' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9418 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9419 self.assertEqual(1, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9420 self.assertEqual(0, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9421 self.assertEqual(1, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9422 self.assertEqual(1, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9423 self.assertEqual(1, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9424 self.assertEqual(1, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9425 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9426 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9427 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9428 DoPut(_REMOTE, '/instances/%s/labels/b' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9429 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9430 self.assertEqual(1, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9431 self.assertEqual(1, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9432 self.assertEqual(1, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9433 self.assertEqual(1, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9434 self.assertEqual(1, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9435 self.assertEqual(1, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9436 self.assertEqual(1, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9437 self.assertEqual(1, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9438 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9439 DoPut(_REMOTE, '/instances/%s/labels/d' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9440 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9441 self.assertEqual(1, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9442 self.assertEqual(1, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9443 self.assertEqual(1, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9444 self.assertEqual(0, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9445 self.assertEqual(1, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9446 self.assertEqual(0, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9447 self.assertEqual(1, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9448 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9449 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9450 DoPut(_REMOTE, '/instances/%s/labels/c' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9451 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9452 self.assertEqual(1, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9453 self.assertEqual(1, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9454 self.assertEqual(0, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9455 self.assertEqual(0, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9456 self.assertEqual(0, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9457 self.assertEqual(0, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9458 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9459 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9460 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9461 DoDelete(_REMOTE, '/instances/%s/labels/b' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9462 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9463 self.assertEqual(1, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9464 self.assertEqual(0, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9465 self.assertEqual(0, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9466 self.assertEqual(0, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9467 self.assertEqual(0, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9468 self.assertEqual(0, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9469 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9470 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9471 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9472 DoDelete(_REMOTE, '/instances/%s/labels/a' % u) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9473 self.assertEqual(1, len(Execute([], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9474 self.assertEqual(0, len(Execute([ 'a' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9475 self.assertEqual(0, len(Execute([ 'a', 'b' ], []))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9476 self.assertEqual(0, len(Execute([], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9477 self.assertEqual(0, len(Execute([], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9478 self.assertEqual(0, len(Execute([ 'a' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9479 self.assertEqual(0, len(Execute([ 'a' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9480 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9481 self.assertEqual(0, len(Execute([ 'a', 'b' ], [ 'c', 'd' ]))) |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9482 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9483 else: |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9484 print("Your database backend doesn't support labels") |