Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 508:ae493446336a
fix tests for missing archives
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Fri, 03 Mar 2023 10:57:09 +0100 |
| parents | 1596865844ff |
| children | 17a74118d73a |
| rev | line source |
|---|---|
| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2022 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
|
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
| 34 | |
| 11 | 35 from PIL import ImageChops |
| 3 | 36 from Toolbox import * |
| 13 | 37 from xml.dom import minidom |
| 312 | 38 from datetime import datetime |
| 3 | 39 |
| 40 _LOCAL = None | |
| 41 _REMOTE = None | |
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42 _DOCKER = False |
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43 |
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44 |
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45 def SetOrthancParameters(local, remote, withinDocker): |
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46 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 47 _LOCAL = local |
| 48 _REMOTE = remote | |
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49 _DOCKER = withinDocker |
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50 |
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51 |
| 14 | 52 def ExtractDicomTags(rawDicom, tags): |
| 53 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 54 f.write(rawDicom) | |
| 55 f.flush() | |
| 45 | 56 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 57 |
| 58 result = [] | |
| 59 for tag in tags: | |
| 60 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 61 if match == None: | |
| 62 result.append('') | |
| 63 else: | |
| 64 result.append(match.group(1)) | |
| 65 | |
| 66 return result | |
| 67 | |
| 68 | |
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69 def CompareLists(a, b): |
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70 if len(a) != len(b): |
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71 return False |
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72 |
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73 for i in range(len(a)): |
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74 d = a[i] - b[i] |
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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76 return False |
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77 |
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78 return True |
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79 |
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80 |
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81 def CompareTags(a, b, tagsToIgnore): |
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82 for i in tagsToIgnore: |
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83 if i in a: |
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84 del a[i] |
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85 if i in b: |
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86 del b[i] |
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87 |
| 123 | 88 if a.keys() == b.keys(): |
| 89 return True | |
| 90 else: | |
| 91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 92 return False | |
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93 |
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94 |
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95 def CallFindScu(args): |
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96 p = subprocess.Popen([ FindExecutable('findscu'), |
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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99 stderr=subprocess.PIPE) |
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100 return p.communicate()[1] |
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101 |
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102 |
| 142 | 103 def GetMoveScuCommand(): |
| 104 return [ | |
| 105 FindExecutable('movescu'), | |
| 106 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 107 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 108 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 109 _REMOTE['Server'], | |
| 110 str(_REMOTE['DicomPort']) | |
| 111 ] | |
| 112 | |
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113 |
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114 def IsDicomUntilPixelDataStored(orthanc): |
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115 # This function detects whether the "StorageCompression" option is |
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116 # "true", OR the storage area does not support read-range |
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117 |
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118 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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119 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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120 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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121 if a != 0x03a0: |
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122 raise Exception('Internal error') |
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123 |
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124 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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125 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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126 raise Exception('Internal error') |
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127 |
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128 DoDelete(orthanc, '/instances/%s' % i) |
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129 |
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130 if len(a) == 1: |
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131 return False |
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132 elif 'dicom-until-pixel-data' in a: |
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133 return True |
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134 else: |
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135 raise Exception('Internal error') |
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136 |
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137 else: |
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138 return False |
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139 |
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140 |
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141 def CallMoveScu(args): |
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142 try: |
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143 subprocess.check_call(GetMoveScuCommand() + args, |
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144 stderr = subprocess.PIPE) |
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145 except subprocess.CalledProcessError as e: |
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146 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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147 # that has been introduced in DCMTK 3.6.2. This error code is |
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148 # expected by some tests that try and C-MOVE non-existing |
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149 # DICOM instances. |
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150 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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151 if e.returncode != 69: |
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152 raise e |
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153 |
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154 |
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155 def GenerateTestSequence(): |
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156 return [ |
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157 { |
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158 'StudyDescription': 'Hello^', |
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159 'ReferencedStudySequence' : [ |
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160 { |
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161 'StudyDescription': 'Toto', |
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162 }, |
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163 { |
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164 'StudyDescription': 'Tata', |
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165 }, |
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166 ] |
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167 }, |
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168 { |
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169 'StudyDescription': 'Sébastien^', |
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170 'StudyDate' : '19700202', |
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171 } |
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172 ] |
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173 |
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174 |
| 3 | 175 class Orthanc(unittest.TestCase): |
| 176 def setUp(self): | |
| 83 | 177 if (sys.version_info >= (3, 0)): |
| 178 # Remove annoying warnings about unclosed socket in Python 3 | |
| 179 import warnings | |
| 180 warnings.simplefilter("ignore", ResourceWarning) | |
| 181 | |
| 508 | 182 print('running : %s' % self.id()) |
| 183 | |
| 3 | 184 DropOrthanc(_LOCAL) |
| 185 DropOrthanc(_REMOTE) | |
| 174 | 186 UninstallLuaCallbacks(_REMOTE) |
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187 |
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188 # Reset stuff possibly set by some integration tests |
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189 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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190 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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191 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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192 |
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193 for i in [ 'toto', 'tata' ]: |
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194 if i in DoGet(_REMOTE, '/modalities'): |
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195 DoDelete(_REMOTE, '/modalities/%s' % i) |
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196 if i in DoGet(_REMOTE, '/peers'): |
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197 DoDelete(_REMOTE, '/peers/%s' % i) |
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198 |
| 312 | 199 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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200 |
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201 def AssertSameImages(self, truth, url): |
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202 im = GetImage(_REMOTE, url) |
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203 self.assertTrue(CompareLists(truth, im.getdata())) |
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204 |
| 3 | 205 |
| 206 def test_system(self): | |
| 177 | 207 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 208 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 209 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 210 | |
| 471 | 211 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 212 system = DoGet(_REMOTE, '/system') | |
| 213 self.assertIn("MainDicomTags", system) | |
| 214 self.assertIn("Patient", system["MainDicomTags"]) | |
| 472 | 215 self.assertIn("Study", system["MainDicomTags"]) |
| 471 | 216 self.assertIn("Series", system["MainDicomTags"]) |
| 217 self.assertIn("Instance", system["MainDicomTags"]) | |
| 218 | |
| 177 | 219 systemInfo = DoGet(_REMOTE, '/system') |
| 220 if systemInfo["Version"] == "mainline": | |
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221 print("Skipping version checks since you're currently in mainline") |
| 177 | 222 return |
| 223 | |
| 173 | 224 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
| 225 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
| 226 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
| 227 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
| 228 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
| 3 | 229 |
| 456 | 230 |
| 3 | 231 def test_upload(self): |
| 173 | 232 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 233 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 234 | |
| 235 sizeDummyCT = 2472 | |
| 236 sizeOverwrite = 2476 | |
| 237 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 238 | |
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239 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 240 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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241 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 242 self.assertEqual(instance, u['ID']) |
| 3 | 243 self.assertEqual('Success', u['Status']) |
| 173 | 244 |
| 183 | 245 if True: |
| 246 # New test for Orthanc 1.4.3 | |
| 247 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 248 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 249 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 250 | |
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251 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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252 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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253 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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254 j = 0 |
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255 else: |
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256 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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257 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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258 |
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259 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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260 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 261 |
| 262 if isCompressed: | |
| 263 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 264 else: | |
| 265 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 266 | |
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267 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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268 self.assertIn('Uuid', attachmentInfo) |
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269 self.assertEqual(1, attachmentInfo['ContentType']) |
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270 |
| 173 | 271 s = sizeDummyCT + j |
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272 |
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273 if isCompressed: |
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274 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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275 else: |
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276 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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277 |
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278 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 279 |
| 3 | 280 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 281 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 282 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 283 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 284 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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285 |
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286 if isCompressed: |
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287 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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288 else: |
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289 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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290 |
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291 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 292 |
| 293 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 294 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 295 self.assertEqual('KNIX', i['PatientName']) |
| 296 | |
| 297 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 298 # Overwriting | |
| 299 self.assertEqual('Success', u['Status']) | |
| 300 else: | |
| 301 self.assertEqual('AlreadyStored', u['Status']) | |
| 302 | |
| 303 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 304 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 305 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 306 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 307 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 308 | |
| 309 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 310 # Overwriting | |
| 311 self.assertEqual('Success', u['Status']) | |
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312 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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313 j2 = 0 |
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314 else: |
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315 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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316 self.assertNotEqual(j, j2) |
| 173 | 317 s2 = sizeOverwrite + j2 |
| 318 self.assertNotEqual(s, s2) | |
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319 if isCompressed: |
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320 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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321 else: |
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322 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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323 |
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324 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 325 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 326 self.assertEqual('ANOTHER', i['PatientName']) | |
| 327 else: | |
| 328 self.assertEqual('AlreadyStored', u['Status']) | |
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329 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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330 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 331 |
| 5 | 332 def test_upload_2(self): |
| 3 | 333 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 334 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 335 self.assertEqual(i, instance['ID']) | |
| 336 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 337 instance['MainDicomTags']['SOPInstanceUID']) | |
| 338 | |
| 339 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 340 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 341 series['MainDicomTags']['SeriesInstanceUID']) | |
| 342 | |
| 343 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 344 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 345 study['MainDicomTags']['StudyInstanceUID']) | |
| 346 | |
| 347 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 348 self.assertEqual('ozp00SjY2xG', | |
| 349 patient['MainDicomTags']['PatientID']) | |
| 350 | |
| 351 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 352 self.assertEqual(2472, len(dicom)) | |
| 353 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 354 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 355 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 356 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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357 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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358 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 359 |
| 360 | |
| 5 | 361 def test_images(self): |
| 362 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 363 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 364 |
| 5 | 365 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 366 self.assertEqual("L", im.mode) | |
| 367 self.assertEqual(512, im.size[0]) | |
| 368 self.assertEqual(358, im.size[1]) | |
| 369 | |
| 370 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 371 self.assertEqual("L", im.mode) | |
| 372 self.assertEqual(512, im.size[0]) | |
| 373 self.assertEqual(358, im.size[1]) | |
| 374 | |
| 375 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 376 self.assertEqual(512, im.size[0]) | |
| 377 self.assertEqual(358, im.size[1]) | |
| 378 | |
| 379 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 380 self.assertEqual("L", im.mode) | |
| 381 self.assertEqual(512, im.size[0]) | |
| 382 self.assertEqual(358, im.size[1]) | |
| 383 | |
| 384 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 385 self.assertEqual("L", im.mode) | |
| 386 self.assertEqual(512, im.size[0]) | |
| 387 self.assertEqual(358, im.size[1]) | |
| 388 | |
| 389 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 390 self.assertEqual(512, im.size[0]) | |
| 391 self.assertEqual(358, im.size[1]) | |
| 64 | 392 |
| 393 # This is Little Endian Explicit | |
| 394 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 395 | |
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396 def test_images_implicit_vr(self): |
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397 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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398 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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399 |
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400 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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401 self.assertEqual("RGB", im.mode) |
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402 self.assertEqual(800, im.size[0]) |
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403 self.assertEqual(600, im.size[1]) |
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404 |
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405 |
| 6 | 406 def test_hierarchy(self): |
| 407 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 408 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 409 UploadFolder(_REMOTE, 'Knee/T1') | |
| 410 UploadFolder(_REMOTE, 'Knee/T2') | |
| 411 | |
| 412 p = DoGet(_REMOTE, '/patients') | |
| 413 s = DoGet(_REMOTE, '/studies') | |
| 414 t = DoGet(_REMOTE, '/series') | |
| 415 self.assertEqual(2, len(p)) | |
| 416 self.assertEqual(2, len(s)) | |
| 417 self.assertEqual(4, len(t)) | |
| 418 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 419 | |
| 420 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 421 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 422 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 423 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 424 | |
| 425 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 426 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 427 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 428 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 429 | |
| 430 self.assertTrue(brainixPatient in p) | |
| 431 self.assertTrue(kneePatient in p) | |
| 432 self.assertTrue(brainixStudy in s) | |
| 433 self.assertTrue(kneeStudy in s) | |
| 434 self.assertTrue(brainixEpi in t) | |
| 435 self.assertTrue(brainixFlair in t) | |
| 436 self.assertTrue(kneeT1 in t) | |
| 437 self.assertTrue(kneeT2 in t) | |
| 438 | |
| 439 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 440 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 441 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 442 | |
| 443 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 444 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 445 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 446 | |
| 447 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 448 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 449 | |
| 450 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 451 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 452 | |
| 453 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 454 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 455 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 456 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 457 | |
| 458 for patient in p: | |
| 459 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 460 self.assertEqual(patient, study['ParentPatient']) | |
| 461 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 462 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 463 self.assertEqual('Unknown', series['Status']) |
| 6 | 464 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 465 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 466 | |
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467 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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468 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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469 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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470 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 471 |
| 472 | |
| 473 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 474 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 475 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 476 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 477 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 478 self.assertEqual(None, r) | |
| 479 | |
| 480 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 481 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 482 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 483 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 484 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 485 self.assertEqual('Study', r['Type']) | |
| 486 self.assertEqual(kneeStudy, r['ID']) | |
| 487 | |
| 488 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 489 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 490 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 491 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 492 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 493 self.assertEqual('Series', r['Type']) | |
| 494 self.assertEqual(kneeT1, r['ID']) | |
| 495 | |
| 496 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 497 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 498 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 499 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 500 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 501 self.assertEqual(None, r) | |
| 502 | |
| 503 DropOrthanc(_REMOTE) | |
| 504 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 505 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 506 |
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507 def test_delete_cascade(self): |
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508 # make sure deleting the last instance of a study deletes the series, study and patient |
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509 |
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510 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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511 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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512 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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513 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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514 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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515 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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516 |
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517 DoDelete(_REMOTE, '/instances/%s' % a) |
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518 |
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519 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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520 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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521 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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522 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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523 |
| 7 | 524 |
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525 def test_multiframe(self): |
| 7 | 526 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 527 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 528 | |
| 529 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 530 self.assertEqual("L", im.mode) | |
| 531 self.assertEqual(512, im.size[0]) | |
| 532 self.assertEqual(512, im.size[1]) | |
| 533 | |
| 534 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 535 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 536 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 537 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 538 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 539 | |
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540 |
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541 def test_changes(self): |
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542 # Check emptiness |
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543 c = DoGet(_REMOTE, '/changes') |
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544 self.assertEqual(0, len(c['Changes'])) |
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545 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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546 self.assertTrue(c['Done']) |
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547 c = DoGet(_REMOTE, '/changes?last') |
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548 self.assertEqual(0, len(c['Changes'])) |
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549 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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550 self.assertTrue(c['Done']) |
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551 |
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552 # Add 1 instance |
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553 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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554 c = DoGet(_REMOTE, '/changes') |
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555 begin = c['Last'] |
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556 self.assertEqual(4, len(c['Changes'])) |
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557 self.assertTrue(c['Done']) |
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558 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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559 |
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560 # Check the order in which the creation events are reported |
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561 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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562 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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563 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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564 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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565 |
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566 c = DoGet(_REMOTE, '/changes?last') |
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567 self.assertEqual(1, len(c['Changes'])) |
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568 self.assertEqual(begin, c['Last']) |
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569 self.assertTrue(c['Done']) |
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570 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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571 self.assertEqual(1, len(c['Changes'])) |
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572 self.assertEqual(begin, c['Last']) |
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573 self.assertTrue(c['Done']) |
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574 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
|
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changeset
|
575 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
576 self.assertEqual(begin - 1, c['Last']) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
577 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
578 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
579 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
580 self.assertEqual(begin - 2, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
581 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
582 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
583 UploadFolder(_REMOTE, 'Knee/T1') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
584 UploadFolder(_REMOTE, 'Knee/T2') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
585 since = begin |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
586 countPatients = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
587 countStudies = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
588 countSeries = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
589 countInstances = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
590 completed = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
591 while True: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
592 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
593 since = c['Last'] |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
594 for i in c['Changes']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
595 if i['ResourceType'] == 'Instance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
596 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
597 if i['ResourceType'] == 'Patient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
598 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
599 if i['ResourceType'] == 'Study': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
600 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
601 if i['ResourceType'] == 'Series': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
602 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
603 if i['ChangeType'] == 'NewInstance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
604 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
605 if i['ChangeType'] == 'NewPatient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
606 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
607 if i['ChangeType'] == 'NewStudy': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
608 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
609 if i['ChangeType'] == 'NewSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
610 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
611 if i['ChangeType'] == 'CompletedSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
612 completed += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
613 self.assertTrue('ID' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
614 self.assertTrue('Path' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
615 self.assertTrue('Seq' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
616 if c['Done']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
617 break |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
618 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
619 self.assertEqual(2 * 50, countInstances) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
620 self.assertEqual(2 * 1, countPatients) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
621 self.assertEqual(2 * 1, countStudies) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
622 self.assertEqual(2 * 2, countSeries) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
623 self.assertEqual(0, completed) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
624 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
625 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
626 def test_archive(self): |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
627 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
628 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 629 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 630 | |
| 631 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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parents:
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diff
changeset
|
632 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
633 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
634 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
635 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
636 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
637 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
638 self.assertEqual(1, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
639 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
640 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 641 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 642 | |
| 643 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
644 self.assertEqual(2, len(z.namelist())) |
| 192 | 645 |
| 646 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 647 'Resources' : [ brainix, knee ] | |
| 648 }) | |
| 649 self.assertEqual(3, len(z.namelist())) | |
|
403
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
650 |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
651 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
652 'Synchronous' : True |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
653 }) |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
654 self.assertEqual(2, len(z.namelist())) |
| 192 | 655 |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
656 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
657 def test_media_archive(self): |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
658 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
659 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
660 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
661 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
662 self.assertEqual(3, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
663 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
664 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
665 self.assertTrue('DICOMDIR' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
666 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
667 try: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
668 os.remove('/tmp/DICOMDIR') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
669 except: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
670 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
671 pass |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
672 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
673 z.extract('DICOMDIR', '/tmp') |
| 45 | 674 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
675 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
676 self.assertEqual(3, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
677 self.assertTrue(a[0].startswith('Warning')) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
678 self.assertEqual('BasicDirectory', a[1]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
679 self.assertEqual('', a[2]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
680 |
| 45 | 681 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
682 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
683 self.assertEqual(1, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
684 self.assertEqual('', a[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
685 |
| 45 | 686 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
687 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
688 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
689 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
690 os.remove('/tmp/DICOMDIR') |
| 10 | 691 |
| 692 | |
| 693 def test_protection(self): | |
| 694 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 695 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 696 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 697 a = DoGet(_REMOTE, '/patients')[0] | |
| 698 b = DoGet(_REMOTE, '/patients')[1] | |
| 699 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 700 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 701 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 702 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 703 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 704 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 705 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 706 | |
| 707 | |
| 12 | 708 def test_raw_tags(self): |
| 10 | 709 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 710 | |
| 711 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 712 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 713 | |
| 714 s = '/instances/%s/content/' % i | |
| 715 | |
| 716 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 717 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 718 | |
| 719 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 720 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 721 | |
| 722 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 723 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 724 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 725 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 726 | |
| 727 for i in DoGet(_REMOTE, '/instances'): | |
| 728 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 729 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 730 | |
| 731 | |
| 732 def test_raw_tags_mdn(self): | |
| 733 # Bug reported by Cyril Paulus | |
| 734 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 735 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 736 | |
| 737 | |
| 738 def test_modify_instance(self): | |
| 739 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 740 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 741 json.dumps({ | |
| 742 "Replace" : { | |
| 743 "PatientName" : "hello", | |
| 744 #"PatientID" : "world" | |
| 745 }, | |
| 746 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
747 "RemovePrivateTags" : True |
| 10 | 748 }), |
| 749 'application/json') | |
| 750 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 751 | |
| 752 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 753 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 754 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 755 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 756 | |
| 757 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 758 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 759 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 760 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 761 | |
| 762 | |
| 763 def test_modify_series(self): | |
| 764 # Upload 4 images from the same series | |
| 765 for i in range(4): | |
| 766 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 767 | |
| 768 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 769 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 770 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 771 'application/json')['ID'] | |
| 772 | |
| 773 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 774 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 775 self.assertEqual(4, len(instances)) | |
| 776 for i in instances: | |
| 777 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 778 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 779 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 780 | |
| 781 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 782 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 783 | |
| 784 | |
| 785 def test_modify_study(self): | |
| 786 # Upload 4 images from the 2 series of the same study | |
| 787 for i in range(4): | |
| 788 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 789 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 790 | |
| 791 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 792 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 793 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 794 'application/json')['ID'] | |
| 795 | |
| 796 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 797 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 798 self.assertEqual(2, len(series)) | |
| 799 for s in series: | |
| 800 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 801 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 802 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 803 | |
| 804 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 805 for i in instances: | |
| 806 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 807 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 808 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 809 | |
| 810 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 811 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 812 | |
| 813 | |
| 814 def test_anonymize_series(self): | |
| 815 # Upload 4 images from the same series | |
| 816 for i in range(4): | |
| 817 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 818 | |
| 819 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 820 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 821 '{}', | |
| 822 'application/json')['ID'] | |
| 823 | |
| 824 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 825 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 826 self.assertEqual(4, len(instances)) | |
| 827 for i in instances: | |
| 828 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 829 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 830 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 831 | |
| 832 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 833 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 834 | |
| 835 | |
| 836 def test_anonymize_study(self): | |
| 837 # Upload 4 images from the 2 series of the same study | |
| 838 for i in range(4): | |
| 839 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 840 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 841 | |
| 842 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 843 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 844 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 845 'application/json')['ID'] | |
| 846 | |
| 847 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 848 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 849 self.assertEqual(2, len(series)) | |
| 850 for s in series: | |
| 851 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 852 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 853 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 854 | |
| 855 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 856 for i in instances: | |
| 857 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 858 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 859 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 860 | |
| 861 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 862 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 863 |
| 864 | |
| 865 | |
| 866 def test_storescu(self): | |
| 867 # Check emptiness | |
| 868 e = DoGet(_REMOTE, '/exports') | |
| 869 self.assertEqual(0, len(e['Exports'])) | |
| 870 self.assertEqual(0, e['Last']) | |
| 871 self.assertTrue(e['Done']) | |
| 872 e = DoGet(_REMOTE, '/exports?last') | |
| 873 self.assertEqual(0, len(e['Exports'])) | |
| 874 self.assertEqual(0, e['Last']) | |
| 875 self.assertTrue(e['Done']) | |
| 876 | |
| 877 # Add 1 instance | |
| 878 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 879 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 880 | |
| 881 # Export the instance | |
| 882 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 883 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 884 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 885 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 886 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 887 | |
| 888 e = DoGet(_REMOTE, '/exports') | |
| 889 self.assertEqual(1, len(e['Exports'])) | |
| 890 self.assertTrue(e['Done']) | |
| 891 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 892 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 893 self.assertEqual(1, len(e['Exports'])) | |
| 894 self.assertTrue(e['Done']) | |
| 895 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 896 e = DoGet(_REMOTE, '/exports?last') | |
| 897 self.assertEqual(1, len(e['Exports'])) | |
| 898 self.assertTrue(e['Done']) | |
| 899 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 900 seqInstance = e['Last'] | |
| 901 | |
| 902 # Export the series | |
| 903 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 904 | |
| 905 e = DoGet(_REMOTE, '/exports') | |
| 906 self.assertEqual(2, len(e['Exports'])) | |
| 907 self.assertTrue(e['Done']) | |
| 908 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 909 seqSeries = e['Last'] | |
| 910 self.assertNotEqual(seqInstance, seqSeries) | |
| 911 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 912 self.assertEqual(1, len(e['Exports'])) | |
| 913 self.assertFalse(e['Done']) | |
| 914 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 915 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 916 self.assertEqual(1, len(e['Exports'])) | |
| 917 self.assertTrue(e['Done']) | |
| 918 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 919 e = DoGet(_REMOTE, '/exports?last') | |
| 920 self.assertEqual(1, len(e['Exports'])) | |
| 921 self.assertTrue(e['Done']) | |
| 922 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 923 | |
| 924 # Export the study | |
| 925 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 926 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 927 | |
| 928 # Export the patient | |
| 929 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 930 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 931 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 932 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 933 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 934 | |
| 935 e = DoGet(_REMOTE, '/exports') | |
| 936 self.assertEqual(4, len(e['Exports'])) | |
| 937 self.assertTrue(e['Done']) | |
| 938 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 939 seqPatient = e['Last'] | |
| 940 self.assertNotEqual(seqInstance, seqSeries) | |
| 941 self.assertNotEqual(seqSeries, seqStudy) | |
| 942 self.assertNotEqual(seqStudy, seqPatient) | |
| 943 self.assertTrue(seqInstance < seqSeries) | |
| 944 self.assertTrue(seqSeries < seqStudy) | |
| 945 self.assertTrue(seqStudy < seqPatient) | |
| 946 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 947 self.assertEqual(1, len(e['Exports'])) | |
| 948 self.assertFalse(e['Done']) | |
| 949 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 950 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 951 self.assertEqual(1, len(e['Exports'])) | |
| 952 self.assertFalse(e['Done']) | |
| 953 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 954 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 955 self.assertEqual(1, len(e['Exports'])) | |
| 956 self.assertFalse(e['Done']) | |
| 957 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 958 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 959 self.assertEqual(1, len(e['Exports'])) | |
| 960 self.assertTrue(e['Done']) | |
| 961 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 962 e = DoGet(_REMOTE, '/exports?last') | |
| 963 self.assertEqual(1, len(e['Exports'])) | |
| 964 self.assertTrue(e['Done']) | |
| 965 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 966 | |
| 967 | |
| 968 # Check the content of the logged information | |
| 969 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 970 | |
| 971 if 'PatientID' in e[0]: | |
| 972 # Since Orthanc 0.8.6 | |
| 973 patient = 'PatientID' | |
| 974 study = 'StudyInstanceUID' | |
| 975 series = 'SeriesInstanceUID' | |
| 976 instance = 'SOPInstanceUID' | |
| 977 else: | |
| 978 # Up to Orthanc 0.8.5 | |
| 979 patient = 'PatientId' | |
| 980 study = 'StudyInstanceUid' | |
| 981 series = 'SeriesInstanceUid' | |
| 982 instance = 'SopInstanceUid' | |
| 983 | |
| 984 for k in range(4): | |
| 985 self.assertTrue('Date' in e[k]) | |
| 986 self.assertTrue('Seq' in e[k]) | |
| 987 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 988 | |
| 989 self.assertEqual(10, len(e[0])) | |
| 990 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 991 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 992 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 993 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 994 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 995 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 996 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 997 | |
| 998 self.assertEqual(9, len(e[1])) | |
| 999 self.assertEqual('Series', e[1]['ResourceType']) | |
| 1000 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 1001 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 1002 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 1003 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 1004 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 1005 | |
| 1006 self.assertEqual(8, len(e[2])) | |
| 1007 self.assertEqual('Study', e[2]['ResourceType']) | |
| 1008 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 1009 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 1010 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1011 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1012 | |
| 1013 self.assertEqual(7, len(e[3])) | |
| 1014 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1015 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1016 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1017 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1018 | |
| 1019 DropOrthanc(_REMOTE) | |
| 1020 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1021 | |
| 1022 | |
| 1023 def test_store_peer(self): | |
| 1024 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1025 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1026 | |
| 1027 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1028 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1029 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1030 | |
| 1031 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1032 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1033 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1034 | |
| 1035 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1036 | |
| 1037 DropOrthanc(_REMOTE) | |
| 1038 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1039 | |
| 1040 | |
| 1041 def test_bulk_storescu(self): | |
| 1042 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1043 | |
| 1044 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1045 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1046 | |
| 1047 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1048 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1049 | |
| 1050 DropOrthanc(_LOCAL) | |
| 1051 | |
| 1052 # Send using patient's UUID | |
| 1053 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1054 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1055 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1056 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1057 | |
| 1058 | |
| 1059 def test_color(self): | |
| 1060 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1061 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1062 self.assertEqual("RGB", im.mode) | |
| 1063 self.assertEqual(41, im.size[0]) | |
| 1064 self.assertEqual(41, im.size[1]) | |
| 1065 | |
| 1066 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1067 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1068 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1069 | |
| 1070 | |
| 12 | 1071 def test_faking_ruby_put(self): |
| 1072 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1073 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1074 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1075 a = DoGet(_REMOTE, '/patients')[0] | |
| 1076 b = DoGet(_REMOTE, '/patients')[1] | |
| 1077 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1078 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1079 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1080 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1081 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1082 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1083 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1084 | |
| 1085 | |
| 1086 def test_faking_ruby_delete(self): | |
| 1087 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1088 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1089 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1090 a = DoGet(_REMOTE, '/patients')[0] | |
| 1091 b = DoGet(_REMOTE, '/patients')[1] | |
| 1092 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1093 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1094 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1095 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1096 | |
| 1097 | |
| 1098 def test_faking_google_put(self): | |
| 1099 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1100 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1101 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1102 a = DoGet(_REMOTE, '/patients')[0] | |
| 1103 b = DoGet(_REMOTE, '/patients')[1] | |
| 1104 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1105 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1106 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1107 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1108 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1109 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1110 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1111 | |
| 1112 | |
| 1113 def test_faking_google_delete(self): | |
| 1114 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1115 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1116 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1117 a = DoGet(_REMOTE, '/patients')[0] | |
| 1118 b = DoGet(_REMOTE, '/patients')[1] | |
| 1119 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1120 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1121 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1122 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1123 | |
| 1124 | |
| 1125 def test_lua(self): | |
| 1126 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1127 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1128 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1129 | |
| 1130 | |
| 1131 def test_metadata(self): | |
| 1132 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1133 p = DoGet(_REMOTE, '/patients')[0] | |
| 1134 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1135 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1136 |
| 1137 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
|
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1138 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1139 self.assertEqual(2, len(m)) |
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1140 self.assertTrue('MainDicomTagsSignature' in m) |
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1141 else: |
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1142 self.assertEqual(1, len(m)) |
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1143 self.assertTrue('LastUpdate' in m) |
| 12 | 1144 |
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1145 # The lines below failed on Orthanc <= 1.8.2 |
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1146 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1147 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1148 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1149 |
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1150 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1151 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1152 self.assertEqual(2, len(m)) |
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1153 self.assertTrue('MainDicomTagsSignature' in m) |
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1154 else: |
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1155 self.assertEqual(1, len(m)) |
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1156 self.assertTrue('LastUpdate' in m) |
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1157 |
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1158 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
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1159 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1160 self.assertEqual(3, len(m)) |
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1161 self.assertTrue('MainDicomTagsSignature' in m) |
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1162 else: |
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1163 self.assertEqual(2, len(m)) |
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1164 self.assertTrue('LastUpdate' in m) |
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1165 |
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1166 # New in Orthanc 1.9.0 |
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1167 self.assertTrue('RemoteAET' in m) |
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1168 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1169 |
| 12 | 1170 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
|
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1171 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1172 self.assertEqual(10, len(m)) |
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1173 self.assertTrue('MainDicomTagsSignature' in m) |
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1174 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1175 self.assertEqual(9, len(m)) |
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1176 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1177 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1178 else: |
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1179 self.assertEqual(8, len(m)) |
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1180 |
| 12 | 1181 self.assertTrue('IndexInSeries' in m) |
| 1182 self.assertTrue('ReceptionDate' in m) | |
| 1183 self.assertTrue('RemoteAET' in m) | |
|
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1184 self.assertTrue('Origin' in m) |
|
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1185 self.assertTrue('TransferSyntax' in m) |
|
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1186 self.assertTrue('SopClassUid' in m) |
| 145 | 1187 self.assertTrue('RemoteIP' in m) |
| 1188 self.assertTrue('HttpUsername' in m) | |
|
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1189 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1190 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1191 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1192 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1193 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1194 |
| 1195 # Play with custom metadata | |
|
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1196 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1197 self.assertEqual('200', headers['status']) |
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1198 self.assertEqual('', body) |
|
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1199 |
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1200 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
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1201 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1202 else: |
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1203 self.assertFalse('ETag' in headers) |
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1204 self.assertFalse('etag' in headers) |
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1205 |
| 12 | 1206 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1207 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1208 self.assertEqual(3, len(m)) |
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1209 self.assertTrue('MainDicomTagsSignature' in m) |
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1210 else: |
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1211 self.assertEqual(2, len(m)) |
| 12 | 1212 self.assertTrue('LastUpdate' in m) |
| 1213 self.assertTrue('5555' in m) | |
| 1214 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1215 |
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1216 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1217 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1218 'If-Match' : headers['etag'] |
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1219 }) |
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1220 else: |
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1221 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1222 |
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1223 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1224 self.assertEqual('200', headers['status']) |
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1225 self.assertEqual('hello', body) |
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1226 |
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1227 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1228 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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1229 'If-Match' : headers['etag'] |
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1230 }) |
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1231 else: |
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1232 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1233 |
| 12 | 1234 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1235 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1236 self.assertEqual(2, len(m)) |
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1237 self.assertTrue('MainDicomTagsSignature' in m) |
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1238 else: |
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|
1239 self.assertEqual(1, len(m)) |
| 12 | 1240 self.assertTrue('LastUpdate' in m) |
| 13 | 1241 |
| 1242 | |
| 1243 def test_statistics(self): | |
| 1244 # Upload 16 instances | |
| 1245 for i in range(4): | |
| 1246 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1247 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1248 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1249 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1250 | |
| 1251 s = DoGet(_REMOTE, '/statistics') | |
| 1252 self.assertEqual(16, s['CountInstances']) | |
| 1253 self.assertEqual(2, s['CountPatients']) | |
| 1254 self.assertEqual(2, s['CountStudies']) | |
| 1255 self.assertEqual(4, s['CountSeries']) | |
| 1256 d = int(s['TotalUncompressedSize']) | |
| 1257 | |
| 1258 e = 0 | |
| 1259 for patient in DoGet(_REMOTE, '/patients'): | |
| 1260 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1261 self.assertEqual(8, s['CountInstances']) | |
| 1262 self.assertEqual(1, s['CountStudies']) | |
| 1263 self.assertEqual(2, s['CountSeries']) | |
| 1264 e += int(s['UncompressedSize']) | |
| 1265 | |
| 1266 for study in DoGet(_REMOTE, '/studies'): | |
| 1267 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1268 self.assertEqual(8, s['CountInstances']) | |
| 1269 self.assertEqual(2, s['CountSeries']) | |
| 1270 e += int(s['UncompressedSize']) | |
| 1271 | |
| 1272 for series in DoGet(_REMOTE, '/series'): | |
| 1273 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1274 self.assertEqual(4, s['CountInstances']) | |
| 1275 e += int(s['UncompressedSize']) | |
| 1276 | |
| 1277 self.assertEqual(3 * d, e) | |
| 1278 | |
| 1279 | |
| 1280 def test_custom_attachment(self): | |
|
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1281 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1282 |
| 13 | 1283 patient = DoGet(_REMOTE, '/patients')[0] |
| 1284 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1285 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1286 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1287 | |
| 1288 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1289 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
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1290 |
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1291 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1292 if IsDicomUntilPixelDataStored(_REMOTE): |
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1293 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1294 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
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1295 |
|
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1296 # New in Orthanc 1.10.0 |
|
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1297 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
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1298 self.assertEqual(2, len(a)) |
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1299 self.assertEqual(1, a['dicom']) |
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1300 self.assertEqual(3, a['dicom-until-pixel-data']) |
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1301 |
|
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1302 else: |
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1303 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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1304 |
|
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|
1305 # New in Orthanc 1.10.0 |
|
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|
1306 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
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1307 self.assertEqual(1, len(a)) |
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1308 self.assertEqual(1, a['dicom']) |
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1309 else: |
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1310 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1311 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1312 |
|
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|
1313 # New in Orthanc 1.10.0 |
|
443
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|
1314 self.assertRaises(Exception, lambda: DoGet( |
|
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1315 _REMOTE, '/instances/%s/attachments?full' % instance)) |
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1316 |
| 13 | 1317 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1318 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1319 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1320 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1321 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1322 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1323 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1324 | |
| 1325 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1326 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1327 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1328 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1329 size + | |
| 1330 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1331 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1332 | |
| 1333 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1334 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1335 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1336 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1337 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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|
1338 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
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1339 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
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1340 }) |
|
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1341 |
|
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1342 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
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|
1343 self.assertEqual('200', headers['status']) |
|
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|
1344 self.assertEqual('world2', body) |
| 13 | 1345 |
| 1346 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
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|
1347 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
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|
1348 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
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1349 }) |
| 13 | 1350 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1351 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1352 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1353 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1354 | |
| 1355 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
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1356 |
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1357 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1358 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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1359 'If-Match' : headers['etag'] |
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1360 }) |
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1361 else: |
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|
1362 self.assertFalse('etag' in headers) |
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1363 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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1364 |
| 13 | 1365 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1366 | |
| 1367 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1368 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1369 | |
| 1370 | |
| 1371 def test_incoming_storescu(self): | |
| 1372 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1373 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
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|
1374 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1375 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1376 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1377 | |
|
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|
1378 i = DoGet(_REMOTE, '/instances') |
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1379 self.assertEqual(1, len(i)) |
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1380 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
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1381 |
|
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1382 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1383 self.assertEqual(10, len(m)) |
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1384 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
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1385 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1386 self.assertEqual(9, len(m)) |
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1387 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1388 else: |
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1389 self.assertEqual(8, len(m)) |
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1390 |
|
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1391 self.assertTrue('IndexInSeries' in m) |
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1392 self.assertTrue('ReceptionDate' in m) |
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|
1393 self.assertTrue('RemoteAET' in m) |
|
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1394 self.assertTrue('Origin' in m) |
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1395 self.assertTrue('TransferSyntax' in m) |
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1396 self.assertTrue('SopClassUid' in m) |
| 145 | 1397 self.assertTrue('RemoteIP' in m) |
| 1398 self.assertTrue('CalledAET' in m) | |
|
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1399 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1400 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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1401 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
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1402 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
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1403 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
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1404 |
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1405 series = DoGet(_REMOTE, '/series')[0] |
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1406 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
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1407 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1408 self.assertEqual(3, len(m)) |
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1409 self.assertTrue('MainDicomTagsSignature' in m) |
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1410 else: |
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1411 self.assertEqual(2, len(m)) |
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1412 self.assertTrue('LastUpdate' in m) |
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1413 self.assertTrue('RemoteAET' in m) |
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1414 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1415 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
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1416 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1417 |
| 13 | 1418 |
| 1419 def test_incoming_findscu(self): | |
| 1420 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1421 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1422 | |
| 1423 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1424 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1425 self.assertEqual(2, len(patientNames)) | |
| 1426 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1427 self.assertTrue('Anonymized' in patientNames) | |
| 1428 | |
| 1429 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1430 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1431 self.assertEqual(2, len(series)) | |
| 1432 self.assertTrue('20070208' in series) | |
| 1433 self.assertTrue('19980312' in series) | |
| 1434 | |
|
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1435 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
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1436 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
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1437 self.assertEqual(1, len(series)) |
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1438 self.assertTrue('19980312' in series) |
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1439 |
| 13 | 1440 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1441 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1442 self.assertEqual(1, len(series)) | |
| 1443 | |
| 1444 # Test the "CaseSentitivePN" flag (false by default) | |
| 1445 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1446 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1447 self.assertEqual(1, len(series)) | |
|
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1448 |
| 70 | 1449 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1450 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1451 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1452 self.assertEqual(2, len(studies)) | |
| 1453 self.assertTrue('20070208' in studies) | |
| 1454 self.assertTrue('19980312' in studies) | |
| 1455 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1456 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1457 self.assertEqual(1, len(studies)) | |
| 1458 self.assertTrue('19980312' in studies) | |
| 1459 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1460 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1461 self.assertEqual(1, len(studies)) | |
| 1462 self.assertTrue('19980312' in studies) | |
|
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1463 |
|
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1464 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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1465 # was *not* the case in Orthanc <= 1.7.2 |
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1466 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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1467 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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1468 self.assertEqual(2, len(instances)) |
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1469 self.assertEqual('ORTHANC', instances[0].strip()) |
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1470 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1471 |
| 1472 | |
|
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1473 def test_incoming_findscu_2(self): |
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1474 # This test fails if "LookupMode_DatabaseOnly" is used |
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1475 # (sequences are not available in this mode, and only main |
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1476 # DICOM tags are returned) |
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1477 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1478 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1479 |
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1480 # Test returning sequence values (only since Orthanc 0.9.5) |
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1481 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1482 sequences = re.findall('\(0008,2112\)', i) |
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1483 self.assertEqual(1, len(sequences)) |
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1484 |
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1485 # Test returning a non-main DICOM tag, |
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1486 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1487 # "MEDPC" in "ColorTestImageJ.dcm" |
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1488 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1489 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1490 self.assertEqual(1, len(tags)) |
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1491 |
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1492 |
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1493 def test_incoming_findscu_3(self): |
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1494 # This test fails if "LookupMode_DatabaseOnly" or |
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1495 # "LookupMode_DiskOnAnswer" is used, as |
|
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1496 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1497 # tag, as thus a constraint cannot be applied to it |
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1498 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1499 |
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1500 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1501 sequences = re.findall('\(0018,1010\)', i) |
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1502 self.assertEqual(1, len(sequences)) |
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1503 |
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1504 |
| 13 | 1505 def test_incoming_movescu(self): |
| 1506 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1507 |
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1508 # No matching patient, so no job is created |
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1509 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1510 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1511 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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1512 |
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1513 # 1 Matching patient, track the job |
| 138 | 1514 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1515 '--patient', | |
| 1516 '-k', '0008,0052=PATIENT', | |
| 1517 '-k', 'PatientID=12345678' | |
| 1518 ]))) | |
| 13 | 1519 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1520 | |
| 1521 | |
| 1522 def test_findscu(self): | |
| 1523 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1524 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1525 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1526 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1527 | |
| 1528 # Test the "find-patient" level | |
| 1529 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1530 self.assertEqual(1, len(p)) | |
| 1531 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1532 | |
| 1533 # Test wildcards constraints. The "LO" value representation | |
| 1534 # for PatientID is always case-sensitive, but the "PN" for | |
| 1535 # PatientName might depend on the implementation: | |
| 1536 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1537 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1538 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1539 self.assertEqual(1, len(p)) | |
| 1540 | |
| 1541 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1542 self.assertEqual(1, len(p)) | |
| 1543 | |
| 1544 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1545 self.assertEqual(1, len(p)) | |
| 1546 | |
| 1547 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1548 self.assertEqual(1, len(p)) | |
| 1549 | |
| 1550 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1551 self.assertEqual(0, len(p)) | |
| 1552 | |
| 1553 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1554 self.assertEqual(0, len(p)) | |
| 1555 | |
| 1556 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1557 self.assertEqual(0, len(p)) | |
| 1558 | |
| 1559 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1560 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1561 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1562 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1563 | |
| 1564 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1565 self.assertEqual(2, len(p)) | |
| 1566 | |
| 1567 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1568 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1569 self.assertEqual(1, len(s)) | |
| 1570 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1571 | |
| 1572 # Test range searches | |
| 1573 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1574 'StudyDate' : '-20070101' }) | |
| 1575 self.assertEqual(0, len(t)) | |
| 1576 | |
| 1577 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1578 'StudyDate' : '20090101-' }) | |
| 1579 self.assertEqual(0, len(t)) | |
| 1580 | |
| 1581 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1582 'StudyDate' : '20070101-' }) | |
| 1583 self.assertEqual(1, len(t)) | |
| 1584 | |
| 1585 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1586 'StudyDate' : '-20090101' }) | |
| 1587 self.assertEqual(1, len(t)) | |
| 1588 | |
| 1589 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1590 'StudyDate' : '20070207-20070207' }) | |
| 1591 self.assertEqual(0, len(t)) | |
| 1592 | |
| 1593 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1594 'StudyDate' : '20070208-20070208' }) | |
| 1595 self.assertEqual(1, len(t)) | |
| 1596 | |
| 1597 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1598 'StudyDate' : '20070209-20070209' }) | |
| 1599 self.assertEqual(0, len(t)) | |
| 1600 | |
| 1601 # Test the ModalitiesInStudy tag | |
| 1602 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1603 'PatientID' : 'B9uTHKOZ', | |
| 1604 'ModalitiesInStudy' : 'US' }) | |
| 1605 self.assertEqual(0, len(t)) | |
| 1606 | |
| 1607 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1608 'PatientID' : 'B9uTHKOZ', | |
| 1609 'ModalitiesInStudy' : 'CT' }) | |
| 1610 self.assertEqual(1, len(t)) | |
| 1611 | |
| 1612 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1613 'PatientID' : 'B9uTHKOZ', | |
| 1614 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1615 self.assertEqual(1, len(t)) | |
| 1616 | |
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1617 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1618 'PatientID' : 'B9uTHKOZ', |
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1619 'ModalitiesInStudy' : '' }) |
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1620 self.assertEqual(1, len(t)) |
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1621 |
| 13 | 1622 # Test the "find-series" level |
| 1623 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1624 'PatientID' : 'B9uTHKOZ', | |
| 1625 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1626 self.assertEqual(1, len(t)) | |
| 1627 | |
| 1628 # Test "\" separator | |
| 1629 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1630 'PatientID' : 'B9uTHKOZ', | |
| 1631 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1632 'Modality' : 'MR\\CT\\US' }) | |
| 1633 self.assertEqual(1, len(t)) | |
| 1634 | |
| 1635 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1636 'PatientID' : 'B9uTHKOZ', | |
| 1637 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1638 'Modality' : 'MR\\US' }) | |
| 1639 self.assertEqual(0, len(t)) | |
| 1640 | |
| 1641 | |
| 1642 def test_update_modalities(self): | |
| 1643 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1644 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1645 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1646 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1647 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1648 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
|
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1649 DoDelete(_REMOTE, '/modalities/tata') |
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1650 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1651 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
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1652 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1653 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1654 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1655 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1656 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1657 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1658 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1659 |
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1660 # New in Orthanc 1.8.1 |
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1661 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1662 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1663 |
| 13 | 1664 DoDelete(_REMOTE, '/modalities/toto') |
| 1665 DoDelete(_REMOTE, '/modalities/tata') | |
| 1666 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1667 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1668 | |
| 1669 | |
| 1670 def test_update_peers(self): | |
| 1671 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1672 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1673 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1674 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1675 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1676 'Username': 'user', | |
| 1677 'Password' : 'pass', | |
| 1678 'RemoteSelf' : 'self' }) | |
| 128 | 1679 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1680 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1681 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1682 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1683 |
| 1684 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1685 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1686 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1687 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1688 else: | |
| 1689 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1690 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1691 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1692 | |
| 128 | 1693 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1694 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1695 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1696 |
| 13 | 1697 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1698 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1699 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1700 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1701 |
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1702 # New in Orthanc 1.8.1 |
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1703 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1704 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1705 |
| 13 | 1706 DoDelete(_REMOTE, '/peers/toto') |
| 1707 DoDelete(_REMOTE, '/peers/tata') | |
| 1708 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1709 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1710 | |
| 1711 | |
| 1712 def test_mesterhazy_modification(self): | |
| 1713 # When I modify a series ( eg. curl | |
| 1714 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1715 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1716 # series is added to a new Study, instead of the existing | |
| 1717 # Study. Fixed in Orthanc 0.7.5 | |
| 1718 | |
| 1719 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1720 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1721 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1722 | |
| 1723 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1724 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1725 | |
| 1726 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1727 | |
| 1728 | |
| 1729 def test_create(self): | |
| 1730 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1731 json.dumps({ | |
| 1732 'PatientName' : 'Jodogne', | |
| 1733 'Modality' : 'CT', | |
| 58 | 1734 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1735 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1736 })) | |
| 1737 | |
| 1738 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1739 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1740 | |
| 1741 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1742 self.assertEqual((5, 5), png.size) | |
| 1743 | |
| 38 | 1744 j = DoGet(_REMOTE, i['Path']) |
| 1745 self.assertEqual('Instance', j['Type']) | |
| 1746 self.assertEqual(j['ID'], i['ID']) | |
| 1747 | |
| 13 | 1748 |
| 1749 def test_pilates(self): | |
| 1750 # "SCU failed error when accessing orthanc with osirix" by | |
| 1751 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1752 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1753 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1754 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1755 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1756 | |
| 1757 | |
| 1758 def test_shared_tags(self): | |
| 1759 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1760 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1761 p = DoGet(_REMOTE, '/patients')[0] | |
| 1762 | |
| 1763 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1764 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1765 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1766 |
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1767 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1768 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1769 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1770 |
| 13 | 1771 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1772 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1773 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1774 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1775 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1776 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1777 | |
| 1778 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1779 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1780 | |
| 1781 | |
| 1782 def test_modules(self): | |
| 1783 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1784 p = DoGet(_REMOTE, '/patients')[0] | |
| 1785 s = DoGet(_REMOTE, '/studies')[0] | |
| 1786 t = DoGet(_REMOTE, '/series')[0] | |
| 1787 | |
| 1788 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1789 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1790 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1791 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1792 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1793 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1794 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1795 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1796 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1797 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1798 | |
| 1799 | |
| 1800 def test_auto_directory(self): | |
| 1801 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1802 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1803 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1804 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1805 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1806 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1807 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1808 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1809 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1810 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1811 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1812 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1813 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1814 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1815 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1816 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1817 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1818 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1819 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1820 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1821 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1822 |
| 1823 | |
| 1824 def test_echo(self): | |
| 1825 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1826 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1827 |
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1828 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1829 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
|
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1830 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1831 |
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1832 # New in Orthanc 1.8.1 |
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1833 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1834 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1835 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1836 |
| 353 | 1837 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1838 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1839 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1840 'AET' : _REMOTE['DicomAet'], | |
| 1841 'Host' : _REMOTE['Server'], | |
| 1842 'Port' : _REMOTE['DicomPort'], | |
| 1843 'CheckFind' : True | |
| 1844 }) | |
| 1845 | |
| 13 | 1846 |
| 1847 def test_xml(self): | |
| 1848 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1849 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1850 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1851 self.assertEqual(len(items), len(json)) | |
| 1852 | |
| 1853 self.assertTrue('dicom-conformance' in json) | |
| 1854 | |
| 1855 ok = False | |
| 1856 for i in items: | |
| 1857 if i.childNodes[0].data == 'dicom-conformance': | |
| 1858 ok = True | |
| 1859 self.assertTrue(ok) | |
| 1860 | |
| 1861 | |
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1862 def test_googlecode_issue_16(self): |
| 13 | 1863 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1864 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1865 self.assertEqual('0018,1063', t) | |
| 1866 | |
| 1867 | |
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1868 def test_googlecode_issue_22(self): |
| 13 | 1869 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1870 a = [ | |
| 1871 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1872 "c69eee9a51eea3e8611e82e578897254", | |
| 1873 "315666be83e2d0111c77bc0996d84901", | |
| 1874 "3e27aa959d911172c48a1436443c72b1", | |
| 1875 "958642c9e7e9d232d3869faff546058c", | |
| 1876 "5e7ea8e3e4230cae707d143481355c59", | |
| 1877 "eda37f83558d858a596175aed8b2ad47", | |
| 1878 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1879 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1880 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1881 "e2f39e85896fe58876654b94cd0b5013", | |
| 1882 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1883 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1884 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1885 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1886 "806b8b3e300c615099c11a5ec23465aa", | |
| 1887 "7c836aa298ba6eef96434579af631a11", | |
| 1888 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1889 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1890 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1891 "44e6670f127e612a2b4aa60a0d207698", | |
| 1892 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1893 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1894 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1895 ] | |
| 1896 | |
| 1897 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1898 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1899 | |
| 1900 for i in range(len(a)): | |
| 1901 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1902 | |
| 1903 | |
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1904 def test_googlecode_issue_19(self): |
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1905 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1906 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1907 | |
| 1908 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1909 if not HasGdcmPlugin(_REMOTE): |
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1910 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1911 |
| 1912 | |
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1913 def test_googlecode_issue_37(self): |
| 13 | 1914 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1915 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1916 | |
| 1917 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1918 'CaseSensitive' : True, | |
| 1919 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1920 self.assertEqual(1, len(a)) | |
| 14 | 1921 |
| 1922 | |
| 1923 def test_rest_find(self): | |
| 1924 # Upload 8 instances | |
| 1925 for i in range(2): | |
| 1926 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1927 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1928 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1929 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1930 | |
| 1931 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1932 'CaseSensitive' : False, | |
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1933 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1934 self.assertEqual(1, len(a)) |
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1935 |
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1936 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1937 'CaseSensitive' : False, |
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1938 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1939 self.assertEqual(2, len(a)) |
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1940 |
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1941 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1942 'CaseSensitive' : False, |
| 14 | 1943 'Query' : { 'PatientName' : '*n*' }}) |
| 1944 self.assertEqual(2, len(a)) | |
| 1945 | |
| 1946 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1947 'CaseSensitive' : True, | |
| 1948 'Query' : { 'PatientName' : '*n*' }}) | |
| 1949 self.assertEqual(0, len(a)) | |
| 1950 | |
| 1951 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1952 'Level' : 'Patient', | |
| 1953 'CaseSensitive' : False, | |
| 1954 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1955 self.assertEqual(1, len(a)) | |
| 1956 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1957 | |
| 1958 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1959 'CaseSensitive' : True, | |
| 1960 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1961 self.assertEqual(0, len(a)) | |
| 1962 | |
| 1963 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1964 'CaseSensitive' : True, | |
| 1965 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1966 self.assertEqual(1, len(a)) | |
| 1967 | |
| 1968 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1969 'CaseSensitive' : True, | |
| 1970 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1971 self.assertEqual(2, len(a)) | |
| 1972 | |
| 1973 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1974 'CaseSensitive' : True, | |
| 1975 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1976 self.assertEqual(4, len(a)) | |
| 1977 | |
| 1978 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1979 self.assertEqual(2, len(a)) | |
| 1980 | |
| 1981 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1982 self.assertEqual(2, len(a)) | |
| 1983 | |
| 1984 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1985 self.assertEqual(4, len(a)) | |
| 1986 | |
| 1987 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1988 self.assertEqual(8, len(a)) | |
| 1989 | |
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1990 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1991 'Expand' : True, |
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1992 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1993 self.assertEqual(1, len(a)) |
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1994 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1995 |
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1996 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1997 'Expand' : True, |
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1998 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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1999 self.assertEqual(2, len(a)) |
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2000 for i in range(2): |
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2001 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2002 |
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2003 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2004 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2005 self.assertEqual(0, len(a)) |
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2006 |
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2007 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2008 'Expand' : True, |
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2009 'Query' : { 'StudyDate' : '-20061201' }}) |
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2010 self.assertEqual(1, len(a)) |
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2011 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2012 |
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2013 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2014 'Expand' : True, |
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2015 'Query' : { 'StudyDate' : '-20051201' }}) |
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2016 self.assertEqual(0, len(a)) |
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2017 |
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2018 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2019 'Expand' : True, |
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2020 'Query' : { 'StudyDate' : '20061201-' }}) |
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2021 self.assertEqual(2, len(a)) |
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2022 for i in range(2): |
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2023 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2024 |
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2025 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2026 'Expand' : True, |
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2027 'Query' : { 'StudyDate' : '20061202-' }}) |
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2028 self.assertEqual(1, len(a)) |
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2029 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2030 |
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2031 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2032 'Expand' : True, |
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2033 'Query' : { 'StudyDate' : '20080819-' }}) |
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2034 self.assertEqual(1, len(a)) |
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2035 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2036 |
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2037 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2038 'Expand' : True, |
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2039 'Query' : { 'StudyDate' : '20080820-' }}) |
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2040 self.assertEqual(0, len(a)) |
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2041 |
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2042 |
| 14 | 2043 |
| 2044 def test_rest_query_retrieve(self): | |
| 2045 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2046 | |
| 2047 # Upload 8 instances | |
| 2048 for i in range(2): | |
| 2049 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2050 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2051 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2052 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2053 | |
| 2054 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2055 for p in DoGet(_REMOTE, '/patients'): | |
| 2056 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2057 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2058 | |
| 2059 for q in DoGet(_REMOTE, '/queries'): | |
| 2060 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2061 | |
| 2062 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2063 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2064 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
| 27 | 2065 'Query' : { |
| 2066 'PatientName' : '*NE*', | |
| 2067 'StudyDate' : '*', | |
| 2068 }})['ID'] | |
| 14 | 2069 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
| 2070 | |
| 2071 b = DoGet(_REMOTE, '/queries/%s' % a) | |
| 2072 self.assertTrue('answers' in b) | |
| 2073 self.assertTrue('level' in b) | |
| 2074 self.assertTrue('modality' in b) | |
| 2075 self.assertTrue('query' in b) | |
| 2076 self.assertTrue('retrieve' in b) | |
| 2077 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
| 2078 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
| 2079 | |
| 2080 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
| 27 | 2081 self.assertEqual(2, len(q)) |
| 14 | 2082 self.assertTrue('PatientName' in q) |
| 27 | 2083 self.assertTrue('StudyDate' in q) |
| 14 | 2084 self.assertEqual('*NE*', q['PatientName']) |
| 27 | 2085 self.assertEqual('*', q['StudyDate']) |
| 14 | 2086 |
| 2087 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 2088 | |
| 2089 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
| 2090 self.assertTrue('content' in s) | |
| 2091 self.assertTrue('retrieve' in s) | |
| 2092 | |
| 2093 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
| 2094 self.assertEqual('887', s['PatientID']) | |
| 2095 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
| 2096 | |
| 2097 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2098 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
| 2099 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 2100 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2101 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 2102 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 2103 | |
| 112 | 2104 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
| 14 | 2105 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 2106 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2107 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2108 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 2109 | |
|
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2110 # New in Orthanc 1.4.3 |
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2111 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2112 self.assertEqual(2, len(s)) |
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2113 for i in range(2): |
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2114 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2115 self.assertEqual('887', s[i]['PatientID']) |
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2116 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2117 |
| 14 | 2118 DoDelete(_REMOTE, '/queries/%s' % a) |
| 2119 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2120 | |
| 2121 | |
| 2122 def test_parent(self): | |
| 2123 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2124 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2125 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2126 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2127 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2128 self.assertEqual(instance, u) |
| 14 | 2129 |
| 2130 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2131 self.assertEqual('Patient', a['Type']) | |
| 2132 self.assertEqual(patient, a['ID']) | |
| 2133 | |
| 2134 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2135 self.assertEqual('Patient', a['Type']) | |
| 2136 self.assertEqual(patient, a['ID']) | |
| 2137 | |
| 2138 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2139 self.assertEqual('Study', a['Type']) | |
| 2140 self.assertEqual(study, a['ID']) | |
| 2141 | |
| 2142 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2143 self.assertEqual('Patient', a['Type']) | |
| 2144 self.assertEqual(patient, a['ID']) | |
| 2145 | |
| 2146 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2147 self.assertEqual('Study', a['Type']) | |
| 2148 self.assertEqual(study, a['ID']) | |
| 2149 | |
| 2150 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2151 self.assertEqual('Series', a['Type']) | |
| 2152 self.assertEqual(series, a['ID']) | |
| 2153 | |
| 2154 | |
| 2155 def test_shanon(self): | |
| 2156 def Anonymize(instance, replacements = {}): | |
| 119 | 2157 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2158 'Replace' : replacements, | |
| 2159 'Force' : True, | |
| 2160 }, 'application/json') | |
| 14 | 2161 |
| 2162 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2163 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2164 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2165 | |
| 2166 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2167 ids = [ 'ozp00SjY2xG', | |
| 2168 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2169 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2170 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2171 | |
| 2172 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2173 for i in range(4): | |
| 2174 self.assertNotEqual(ids[i], a[i]) | |
| 2175 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2176 | |
| 2177 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2178 for i in range(4): | |
| 2179 self.assertNotEqual(ids[i], a[i]) | |
| 2180 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2181 | |
| 2182 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2183 self.assertEqual('instance', a[3]) | |
| 2184 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2185 | |
| 2186 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2187 self.assertEqual('series', a[2]) | |
| 2188 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2189 | |
| 2190 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2191 self.assertEqual('study', a[1]) | |
| 2192 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2193 | |
| 2194 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2195 self.assertEqual('patient', a[0]) | |
| 2196 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2197 | |
| 2198 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2199 'StudyInstanceUID' : 'study', | |
| 2200 'SeriesInstanceUID' : 'series', | |
| 2201 'SOPInstanceUID' : 'instance' }), tags) | |
| 2202 self.assertEqual('patient', a[0]) | |
| 2203 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2204 | |
| 2205 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2206 | |
| 2207 | |
| 2208 def test_shanon_2(self): | |
| 2209 def Modify(instance, replacements = {}): | |
| 119 | 2210 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2211 'Replace' : replacements, | |
| 2212 'Force': True, | |
| 2213 }, 'application/json') | |
| 14 | 2214 |
| 2215 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2216 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2217 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2218 | |
| 2219 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2220 ids = [ 'ozp00SjY2xG', | |
| 2221 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2222 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2223 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2224 | |
| 2225 a = ExtractDicomTags(Modify(u), tags) | |
| 2226 self.assertEqual(ids[0], a[0]) | |
| 2227 self.assertEqual(ids[1], a[1]) | |
| 2228 self.assertEqual(ids[2], a[2]) | |
| 2229 self.assertNotEqual(ids[3], a[3]) | |
| 2230 self.assertEqual(0, len(a[4])) | |
| 2231 | |
| 2232 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2233 self.assertEqual(ids[0], a[0]) | |
| 2234 self.assertEqual(ids[1], a[1]) | |
| 2235 self.assertEqual(ids[2], a[2]) | |
| 2236 self.assertEqual('instance', a[3]) | |
| 2237 | |
| 2238 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2239 self.assertEqual(ids[0], a[0]) | |
| 2240 self.assertEqual(ids[1], a[1]) | |
| 2241 self.assertEqual('series', a[2]) | |
| 2242 self.assertNotEqual(ids[3], a[3]) | |
| 2243 | |
| 2244 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2245 self.assertEqual(ids[0], a[0]) | |
| 2246 self.assertEqual('study', a[1]) | |
| 2247 self.assertNotEqual(ids[2], a[2]) | |
| 2248 self.assertNotEqual(ids[3], a[3]) | |
| 2249 | |
| 2250 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2251 self.assertEqual('patient', a[0]) | |
| 2252 self.assertNotEqual(ids[1], a[1]) | |
| 2253 self.assertNotEqual(ids[2], a[2]) | |
| 2254 self.assertNotEqual(ids[3], a[3]) | |
| 2255 | |
| 2256 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2257 'StudyInstanceUID' : 'study', | |
| 2258 'SeriesInstanceUID' : 'series', | |
| 2259 'SOPInstanceUID' : 'instance' }), tags) | |
| 2260 self.assertEqual('patient', a[0]) | |
| 2261 self.assertEqual('study', a[1]) | |
| 2262 self.assertEqual('series', a[2]) | |
| 2263 self.assertEqual('instance', a[3]) | |
| 2264 | |
| 2265 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2266 | |
| 2267 | |
| 2268 def test_instances_tags(self): | |
| 2269 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2270 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2271 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2272 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2273 | |
| 2274 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2275 self.assertEqual(2, len(i)) | |
| 2276 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2277 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2278 | |
| 2279 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2280 self.assertEqual(2, len(i)) | |
| 2281 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2282 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2283 | |
| 2284 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2285 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2286 self.assertEqual(1, len(i)) | |
| 2287 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2288 | |
| 2289 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2290 self.assertEqual(1, len(i)) | |
| 2291 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2292 | |
|
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2293 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2294 self.assertEqual(1, len(i)) |
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2295 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2296 |
| 14 | 2297 |
| 2298 def test_lookup(self): | |
| 2299 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2300 self.assertEqual(0, len(a)) | |
| 2301 | |
| 2302 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2303 | |
| 2304 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2305 self.assertEqual(1, len(a)) | |
| 2306 self.assertEqual('Patient', a[0]['Type']) | |
| 2307 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2308 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2309 | |
| 2310 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2311 self.assertEqual(1, len(a)) | |
| 2312 self.assertEqual('Study', a[0]['Type']) | |
| 2313 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2314 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2315 | |
| 2316 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2317 self.assertEqual(1, len(a)) | |
| 2318 self.assertEqual('Series', a[0]['Type']) | |
| 2319 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2320 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2321 | |
| 2322 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2323 self.assertEqual(1, len(a)) | |
| 2324 self.assertEqual('Instance', a[0]['Type']) | |
| 2325 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2326 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2327 | |
| 2328 DropOrthanc(_REMOTE) | |
| 2329 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2330 self.assertEqual(0, len(a)) | |
| 2331 | |
| 15 | 2332 |
| 2333 def test_autorouting(self): | |
| 2334 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2335 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2336 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2337 | |
| 2338 # Check that this version is >= 0.8.0 | |
| 2339 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2340 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2341 | |
| 2342 UploadInstance(_REMOTE, knee1) | |
| 2343 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2344 | |
| 2345 DropOrthanc(_REMOTE) | |
| 2346 DropOrthanc(_LOCAL) | |
| 174 | 2347 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2348 UploadInstance(_REMOTE, knee1) |
| 2349 UploadInstance(_REMOTE, knee2) | |
| 2350 UploadInstance(_REMOTE, other) | |
| 2351 WaitEmpty(_REMOTE) | |
| 174 | 2352 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2353 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2354 | |
| 2355 DropOrthanc(_REMOTE) | |
| 2356 DropOrthanc(_LOCAL) | |
| 174 | 2357 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2358 UploadInstance(_REMOTE, knee1) |
| 2359 UploadInstance(_REMOTE, knee2) | |
| 2360 UploadInstance(_REMOTE, other) | |
| 2361 WaitEmpty(_REMOTE) | |
| 174 | 2362 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2363 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2364 | |
| 2365 DropOrthanc(_REMOTE) | |
| 2366 DropOrthanc(_LOCAL) | |
| 174 | 2367 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2368 UploadInstance(_REMOTE, knee1) |
| 2369 WaitEmpty(_REMOTE) | |
| 174 | 2370 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2371 i = DoGet(_LOCAL, '/instances') |
| 2372 self.assertEqual(1, len(i)) | |
| 2373 | |
| 2374 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2375 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2376 f.flush() | |
| 45 | 2377 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2378 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2379 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2380 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2381 |
| 2382 | |
| 2383 def test_storescu_rf(self): | |
| 2384 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2385 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2386 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2387 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2388 |
| 2389 | |
| 2390 def test_anonymize_instance(self): | |
| 2391 def AnonymizeAndUpload(instanceId, parameters): | |
| 2392 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2393 'application/json'), 'application/dicom')['ID'] | |
| 2394 | |
| 2395 def ModifyAndUpload(instanceId, parameters): | |
| 2396 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2397 'application/json'), 'application/dicom')['ID'] | |
| 2398 | |
| 2399 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2400 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2401 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2402 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2403 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2404 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2405 | |
| 2406 b = AnonymizeAndUpload(a, '{}') | |
| 2407 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2408 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2409 | |
| 2410 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2411 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2412 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2413 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2414 | |
| 2415 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2416 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2417 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2418 | |
| 2419 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2420 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2421 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2422 | |
| 2423 # Examples from the Wiki | |
|
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|
2424 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2425 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2426 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2427 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2428 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2429 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2430 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2431 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2432 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2433 | |
|
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|
2434 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2435 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2436 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2437 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2438 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2439 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2440 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2441 | |
|
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|
2442 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2443 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2444 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2445 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2446 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2447 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2448 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2449 | |
| 2450 | |
| 2451 # Test modify non-existing | |
| 2452 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2453 json.dumps({ | |
| 2454 'PatientName' : 'Jodogne', | |
| 2455 'Modality' : 'CT', | |
| 2456 }))['ID'] | |
| 2457 | |
| 2458 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2459 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2460 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2461 | |
| 2462 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2463 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2464 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2465 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2466 | |
|
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2467 |
|
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|
2468 def test_incoming_jpeg(self): |
|
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|
2469 # since this test fails regularly on CI, enable verbosity |
|
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2470 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
|
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|
2471 |
|
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2472 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
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|
2473 if acceptUnknownSopClassUid: |
|
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|
2474 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
|
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2475 else: |
|
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|
2476 tmp = [ '-xs' ] |
|
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|
2477 |
|
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|
2478 while retries > 0: |
|
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|
2479 retries -= 1 |
|
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2480 with open(os.devnull, 'w') as FNULL: |
|
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|
2481 try: |
|
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|
2482 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
|
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2483 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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|
2484 GetDatabasePath(image) ], |
|
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2485 stderr = FNULL) |
|
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|
2486 |
|
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|
2487 if expectSuccess: |
|
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|
2488 return |
|
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retries storescu if it succeeds while it should fail
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|
2489 except subprocess.CalledProcessError as e: |
|
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|
2490 print('storescu failed with error code: %s' % str(e.returncode)) |
|
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2491 if not expectSuccess: |
|
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|
2492 raise e |
|
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|
2493 |
|
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|
2494 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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|
2495 |
|
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|
2496 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
|
f673153f27a4
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|
2497 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
|
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|
2498 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
|
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|
2499 ]) |
|
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2500 self.assertTrue('1.2.840.10008.1.2' in a) |
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2501 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2502 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2503 self.assertEqual(3, len(a)) |
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2504 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2505 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
|
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2506 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
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2507 else: |
|
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|
2508 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
|
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|
2509 |
| 490 | 2510 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
|
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|
2511 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
|
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2512 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
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|
2513 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2514 |
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|
2515 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2516 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
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|
2517 self.assertGreaterEqual(42, len(a)) |
|
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|
2518 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
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|
2519 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2520 else: |
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|
2521 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
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2522 |
|
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|
2523 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
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|
2524 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
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|
2525 storescu('UnknownSopClassUid.dcm', True) |
|
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|
2526 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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2527 |
|
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|
2528 # set back normal verbosity |
|
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changeset
|
2529 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
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|
2530 |
|
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diff
changeset
|
2531 def test_storescu_jpeg(self): |
|
2a29bcff60a7
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|
2532 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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2533 |
|
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|
2534 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2535 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2536 | |
| 2537 # This is JPEG lossless | |
|
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diff
changeset
|
2538 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2539 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2540 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2541 |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2543 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2544 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2545 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2546 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2547 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2548 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2552 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 def test_pixel_data(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2568 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2569 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2570 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2571 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2572 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2573 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2574 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2575 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2576 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2577 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2578 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2579 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2580 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2581 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2582 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2583 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2584 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2585 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2586 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2587 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2588 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2589 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2590 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2591 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2592 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2593 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2594 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2595 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2618 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2619 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2620 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2621 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2622 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2623 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2624 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2625 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2626 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2627 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2628 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2629 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2630 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2631 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2632 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2633 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2634 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2635 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2636 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2637 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2638 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2639 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2640 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2641 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
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|
2642 |
|
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tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2643 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2644 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2645 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2646 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2647 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2648 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2649 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2650 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2651 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2652 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2653 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2654 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2655 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2656 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2657 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2658 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2659 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2660 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2661 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2662 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2663 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2664 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2665 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2666 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2667 |
| 2668 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2669 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
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parents:
89
diff
changeset
|
2670 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2671 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2672 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2673 |
| 22 | 2674 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2675 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2676 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2677 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2678 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2679 | |
|
92
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2680 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2681 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2682 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2683 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2684 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2685 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2686 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2687 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2688 |
| 22 | 2689 def test_encodings(self): |
| 23 | 2690 # Latin-1 (ISO_IR 100) |
| 22 | 2691 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2692 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2693 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2694 |
| 2695 # Latin-2 (ISO_IR 101) | |
| 2696 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2697 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2698 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2699 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2700 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2701 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2702 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2703 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2704 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2705 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2706 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2707 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2708 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2709 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2710 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2711 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2712 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2713 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2714 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2715 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2716 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2717 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2718 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2719 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2720 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2721 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2722 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2723 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2724 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2725 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2726 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2727 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2728 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2729 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2730 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2731 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2732 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2733 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2734 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2735 |
| 174 | 2736 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2737 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2738 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2739 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2740 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2741 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2742 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2743 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
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23
diff
changeset
|
2744 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2745 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2746 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2747 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2748 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2749 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
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changeset
|
2750 |
|
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2751 def test_resources_since_limit(self): |
|
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2752 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2753 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2754 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2755 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2756 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2757 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2758 |
|
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2759 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2760 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2761 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2762 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2763 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2764 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2765 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2766 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2767 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2768 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2769 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2770 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2771 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2772 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2773 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2774 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2775 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2776 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2777 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2778 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2779 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2780 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2781 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2782 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2783 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2784 s = {} |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2785 since = 0 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2786 while True: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2787 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2788 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2789 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2790 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2791 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2792 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2793 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2794 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2795 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2796 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2797 self.assertTrue(instance in s) |
| 36 | 2798 |
| 2799 | |
| 2800 def test_create_pdf(self): | |
| 2801 # Upload 4 instances | |
| 2802 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2803 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2804 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2805 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2806 | |
| 2807 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2808 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2809 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2810 | |
| 2811 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2812 pdf = f.read() | |
| 2813 | |
| 2814 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2815 json.dumps({ | |
| 2816 'Tags' : { | |
| 2817 'PatientName' : 'Jodogne', | |
| 2818 'Modality' : 'CT', | |
| 2819 }, | |
| 2820 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2821 })) | |
| 2822 | |
| 2823 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2824 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2825 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2826 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 2827 |
| 2828 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2829 self.assertEqual(len(b), len(pdf) + 1) | |
| 2830 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2831 | |
| 2832 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2833 json.dumps({ | |
| 2834 'Parent' : brainixPatient, | |
| 2835 'Tags' : { | |
| 2836 'PatientName' : 'Jodogne', | |
| 2837 } | |
| 2838 }))) | |
| 2839 | |
| 2840 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2841 json.dumps({ | |
| 2842 'Parent' : brainixPatient, | |
| 2843 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2844 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2845 })) | |
| 2846 | |
| 2847 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2848 | |
| 2849 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2850 json.dumps({ | |
| 2851 'Parent' : brainixStudy, | |
| 2852 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2853 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2854 })) | |
| 2855 | |
| 2856 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2857 | |
| 2858 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2859 json.dumps({ | |
| 2860 'Parent' : brainixEpi, | |
| 37 | 2861 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2862 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2863 })) | |
| 2864 | |
| 2865 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2866 | |
| 2867 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2868 self.assertEqual(len(b), len(pdf)) | |
| 2869 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2870 | |
| 2871 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2872 |
| 2873 | |
| 2874 def test_create_series(self): | |
| 2875 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2876 json.dumps({ | |
| 2877 'Tags' : { | |
| 40 | 2878 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2879 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2880 'Modality' : 'CT', |
| 2881 }, | |
| 2882 'Content' : [ | |
| 40 | 2883 { |
| 2884 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2885 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2886 }, | |
| 38 | 2887 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2888 ] | |
| 2889 })) | |
| 2890 | |
| 2891 s = DoGet(_REMOTE, i['Path']) | |
| 2892 self.assertEqual('Series', s['Type']) | |
| 2893 self.assertEqual(s['ID'], i['ID']) | |
| 2894 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2895 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2896 self.assertEqual('Complete', s['Status']) | |
| 40 | 2897 |
| 2898 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2899 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2900 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2901 if 'ImageComments' in a: | |
| 2902 self.assertEqual('Tutu', a['ImageComments']) | |
| 2903 else: | |
| 2904 self.assertEqual('Tutu', b['ImageComments']) | |
| 2905 | |
| 2906 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2907 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2908 'Sébastien Jodogne') | |
| 47 | 2909 |
| 2910 | |
| 2911 def test_create_binary(self): | |
| 2912 binary = ''.join(map(chr, range(256))) | |
| 2913 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2914 tags = { | |
| 2915 'PatientName' : 'Jodogne', | |
| 2916 '8899-8899' : encoded | |
| 2917 } | |
| 2918 | |
| 2919 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2920 json.dumps({ | |
| 266 | 2921 'Tags' : tags, |
| 2922 'PrivateCreator' : 'TestBinary', | |
| 47 | 2923 })) |
| 2924 | |
| 2925 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2926 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2927 | |
| 2928 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2929 json.dumps({ | |
| 2930 'InterpretBinaryTags' : False, | |
| 266 | 2931 'Tags' : tags, |
| 2932 'PrivateCreator' : 'TestBinary', | |
| 47 | 2933 })) |
| 2934 | |
| 2935 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2936 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2937 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2938 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2939 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2940 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2941 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2942 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2943 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2944 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2945 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2946 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2947 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2948 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2949 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2950 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2951 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2952 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2953 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2954 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2955 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2956 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2957 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2958 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2959 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2960 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2961 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2962 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2963 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2964 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2965 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2966 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2967 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2968 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2969 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2970 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2971 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2972 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2973 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2974 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2975 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2976 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2977 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2978 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2979 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2980 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2981 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2982 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2983 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2984 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2985 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2986 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2987 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2988 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2989 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2990 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2991 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2992 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2993 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2994 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2995 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2996 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2997 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2998 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2999 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3000 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3001 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3002 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3003 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3004 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3005 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3006 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3007 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3008 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3009 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3010 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3011 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3012 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3013 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3014 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3015 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3016 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3017 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3018 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3019 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3020 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3021 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3022 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3023 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3024 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3025 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3026 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3027 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3028 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3029 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3030 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3031 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3032 }), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3033 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3034 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3035 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3036 |
| 52 | 3037 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3038 | |
| 3039 | |
| 3040 def test_compression(self): | |
| 3041 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3042 | |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3043 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3044 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3045 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3046 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3047 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3048 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3049 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3050 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3051 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3052 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3053 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3054 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3055 # If "StorageCompression" is enabled in the Orthanc to be |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3056 # tested, uncompress the attachment before running the test |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3057 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3058 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3059 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3060 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3061 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3062 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3063 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3064 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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3065 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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3066 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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3067 |
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|
3068 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3069 self.assertTrue('compress' in ops) |
| 3070 self.assertTrue('uncompress' in ops) | |
| 3071 self.assertTrue('is-compressed' in ops) | |
|
380
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3072 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
3073 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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3074 |
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|
3075 # Re-compress the attachment |
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3076 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
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3077 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
3078 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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3079 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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3080 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
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3081 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
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3082 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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3083 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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3084 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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3085 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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3086 |
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3087 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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3088 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
3089 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
3090 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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3091 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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3092 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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3093 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3094 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
3095 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3096 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3097 |
| 3098 | |
| 3099 def test_ordered_slices(self): | |
| 3100 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3101 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3102 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3103 self.assertEqual('Sequence', o['Type']) | |
| 3104 self.assertEqual(1, len(o['Dicom'])) | |
| 3105 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3106 self.assertEqual(76, len(o['Slices'])) | |
| 3107 for j in range(76): | |
| 3108 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3109 | |
| 68 | 3110 self.assertEqual(1, len(o['SlicesShort'])) |
| 3111 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3112 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3113 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3114 | |
| 53 | 3115 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3116 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3117 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3118 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3119 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3120 | |
| 3121 self.assertEqual('Volume', o['Type']) | |
| 3122 self.assertEqual(3, len(o['Dicom'])) | |
| 3123 self.assertEqual(3, len(o['Slices'])) | |
| 3124 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3125 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3126 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3127 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3128 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3129 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3130 | |
| 68 | 3131 self.assertEqual(3, len(o['SlicesShort'])) |
| 3132 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3133 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3134 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3135 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3136 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3137 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3138 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3139 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3140 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3141 | |
| 53 | 3142 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3143 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3144 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3145 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3146 | |
| 3147 self.assertEqual('Sequence', o['Type']) | |
| 3148 self.assertEqual(2, len(o['Dicom'])) | |
| 3149 self.assertEqual(2, len(o['Slices'])) | |
| 3150 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3151 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3152 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3153 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
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|
3154 |
| 68 | 3155 self.assertEqual(2, len(o['SlicesShort'])) |
| 3156 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3157 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3158 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3159 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3160 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3161 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3162 | |
| 3163 | |
|
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|
3164 |
|
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|
3165 def test_incoming_movescu_accession(self): |
|
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|
3166 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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3167 |
|
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|
3168 # No matching patient, so no job is created |
|
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|
3169 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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|
3170 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
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|
3171 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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|
3172 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
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|
3173 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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3174 |
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|
3175 # 1 Matching patient, track the job |
| 138 | 3176 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3177 '--study', | |
| 3178 '-k', '0008,0052=STUDY', | |
| 3179 '-k', 'AccessionNumber=A10003245599' | |
| 3180 ]))) | |
|
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3181 |
|
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3182 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
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|
3183 |
| 55 | 3184 |
| 3185 def test_dicom_to_json(self): | |
| 3186 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
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3187 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
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3188 |
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|
3189 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
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|
3190 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
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|
3191 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3192 # Tags for compatibility with DCMTK 3.6.0 |
| 3193 'RETIRED_OtherPatientIDs', | |
| 3194 'OtherPatientIDs', | |
| 3195 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
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|
3196 ])) |
| 55 | 3197 |
| 3198 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3199 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
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|
3200 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
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|
3201 ])) |
| 55 | 3202 |
|
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|
3203 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
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|
3204 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
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3205 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
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3206 ])) |
|
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3207 |
|
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3208 |
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3209 # NB: To get the actual value of the "tags" JSON file, use the |
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|
3210 # following command: |
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3211 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
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|
3212 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
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|
3213 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
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|
3214 a = json.loads(f.read()) |
|
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3215 |
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|
3216 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
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3217 # reports are truncated starting with PixelData |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3218 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3219 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3220 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3221 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3222 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3223 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3224 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3225 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3226 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3227 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3228 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3229 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3230 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3231 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3232 self.assertEqual(aa, tt) |
| 57 | 3233 |
| 3234 | |
| 3235 def test_batch_archive(self): | |
| 3236 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3237 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3238 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3239 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3240 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3241 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3242 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3243 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3244 | |
| 3245 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3246 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3247 self.assertEqual(0, len(z.namelist())) | |
| 3248 | |
| 3249 # One patient | |
| 3250 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3251 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3252 self.assertEqual(4, len(z.namelist())) | |
| 3253 | |
| 3254 # One patient + twice its study + one series from other patient | |
| 3255 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3256 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3257 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3258 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3259 ]) | |
| 3260 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3261 self.assertEqual(6, len(z.namelist())) | |
| 3262 | |
| 3263 # One patient + one series + one instance | |
| 3264 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3265 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3266 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3267 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3268 ]) | |
| 3269 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3270 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3271 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3272 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3273 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3274 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3275 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3276 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3277 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3278 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3279 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3280 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3281 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3282 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3283 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3284 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3285 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3286 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3287 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3288 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3289 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3290 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3291 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3292 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3293 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3294 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3295 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3296 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3297 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3298 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3299 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3300 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3301 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3302 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3303 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3304 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3305 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3306 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3307 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3308 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3309 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3310 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3311 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3312 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3313 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3314 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3315 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3316 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3317 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3318 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3319 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3320 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3321 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3322 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3323 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3324 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3325 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3326 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3327 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3328 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3329 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3330 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3331 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3332 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3333 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3334 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3335 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3336 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3337 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3338 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3339 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3340 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3341 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3342 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3343 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3344 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3345 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
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|
3346 |
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3347 |
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|
3348 def test_findscu_counters(self): |
|
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3349 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
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|
3350 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
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|
3351 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
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|
3352 |
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|
3353 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
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|
3354 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
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|
3355 self.assertEqual(1, len(s)) |
|
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|
3356 self.assertTrue('1 ' in s) |
|
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|
3357 |
|
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|
3358 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
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|
3359 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
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|
3360 self.assertEqual(1, len(s)) |
|
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|
3361 self.assertTrue('2 ' in s) |
|
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|
3362 |
|
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|
3363 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
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|
3364 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
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|
3365 self.assertEqual(1, len(s)) |
|
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|
3366 self.assertTrue('3 ' in s) |
|
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|
3367 |
|
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|
3368 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
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|
3369 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
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|
3370 self.assertEqual(1, len(s)) |
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|
3371 self.assertTrue('2 ' in s) |
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|
3372 |
|
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|
3373 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
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|
3374 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
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|
3375 self.assertEqual(1, len(s)) |
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|
3376 self.assertTrue('3 ' in s) |
|
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|
3377 |
|
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|
3378 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
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|
3379 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
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|
3380 self.assertEqual(2, len(s)) |
|
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|
3381 self.assertTrue('1 ' in s) |
|
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|
3382 self.assertTrue('2 ' in s) |
|
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|
3383 |
|
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|
3384 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
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|
3385 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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|
3386 self.assertEqual(1, len(s)) |
|
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|
3387 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
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|
3388 self.assertTrue('PT' in t) |
|
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|
3389 self.assertTrue('CT' in t) |
|
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|
3390 |
|
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|
3391 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
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|
3392 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
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|
3393 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
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am@osimis.io
parents:
175
diff
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|
3394 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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|
3395 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
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|
3396 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
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|
3397 |
|
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|
3398 |
|
78
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diff
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|
3399 def test_decode_transfer_syntax(self): |
|
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3400 def Check(t, md5): |
|
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|
3401 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
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|
3402 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
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diff
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|
3403 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
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diff
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|
3404 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
74b7b9aed5f8
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|
3405 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
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|
3406 |
|
78
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|
3407 if md5 == None: |
|
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|
3408 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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|
3409 else: |
|
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|
3410 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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|
3411 self.assertEqual(m, md5) |
|
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|
3412 |
|
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diff
changeset
|
3413 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
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|
3414 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
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|
3415 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
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|
3416 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
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|
3417 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3418 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3419 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3420 | |
| 3421 # The 3 checks below don't work on big-endian | |
| 3422 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
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diff
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|
3423 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
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|
3424 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
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diff
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|
3425 |
|
c2144cf4bd83
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diff
changeset
|
3426 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3427 if not HasGdcmPlugin(_REMOTE): |
|
299
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|
3428 Check('1.2.840.10008.1.2.4.90', None) |
|
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|
3429 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3430 |
| 3431 | |
| 3432 def test_raw_frame(self): | |
| 3433 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3434 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3435 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3436 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3437 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3438 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3439 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3440 | |
| 3441 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3442 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3443 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3444 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3445 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3446 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3447 self.assertEqual("L", im.mode) | |
| 3448 self.assertEqual(512, im.size[0]) | |
| 3449 self.assertEqual(512, im.size[1]) | |
| 3450 | |
| 3451 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3452 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3453 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3454 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3455 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3456 self.assertEqual(69214, len(a)) | |
| 3457 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3458 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3459 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3460 self.assertEqual("RGB", im.mode) | |
| 3461 self.assertEqual(512, im.size[0]) | |
| 3462 self.assertEqual(512, im.size[1]) | |
| 323 | 3463 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3464 self.assertEqual("RGB", im.mode) |
| 3465 self.assertEqual(512, im.size[0]) | |
| 3466 self.assertEqual(512, im.size[1]) | |
| 81 | 3467 |
| 3468 | |
| 3469 | |
| 3470 def test_rest_movescu(self): | |
| 3471 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3472 | |
| 3473 # Upload 4 instances | |
| 3474 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3475 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3476 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3477 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3478 | |
| 3479 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3480 for p in DoGet(_REMOTE, '/patients'): | |
| 3481 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3482 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3483 | |
| 3484 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3485 | |
|
482
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3486 # Move instance Brainix/Flair/IM-0001-0001.dcm |
|
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|
3487 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
changeset
|
3488 'Level' : 'Instance', |
|
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473
diff
changeset
|
3489 'Resources' : [ |
|
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473
diff
changeset
|
3490 { |
|
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diff
changeset
|
3491 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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diff
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|
3492 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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diff
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|
3493 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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diff
changeset
|
3494 } |
|
535e651e70a2
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diff
changeset
|
3495 ]}) |
|
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diff
changeset
|
3496 |
|
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diff
changeset
|
3497 # Move series Brainix/Flair/* |
| 81 | 3498 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 3499 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3500 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3501 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3502 | |
|
482
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Alain Mazy <am@osimis.io>
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diff
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|
3503 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
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diff
changeset
|
3504 # Reset and test asynchronous C-Move at instance level |
|
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diff
changeset
|
3505 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3506 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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diff
changeset
|
3507 |
|
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diff
changeset
|
3508 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
changeset
|
3509 'Level' : 'Instance', |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3510 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3511 { |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3512 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
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parents:
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diff
changeset
|
3513 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3514 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
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|
3515 } |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
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|
3516 ], |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3517 'Asynchronous': True |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3518 }) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3519 |
|
535e651e70a2
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changeset
|
3520 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3521 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
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diff
changeset
|
3522 'Level' : 'Instance', |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3523 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3524 { |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3525 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3526 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3527 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3528 } |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3529 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3530 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3531 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3532 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3533 self.assertNotEqual(None, job) |
|
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3534 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3535 # check the job was successfull |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3536 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3537 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3538 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3539 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3540 |
|
535e651e70a2
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parents:
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diff
changeset
|
3541 # check the job content |
|
535e651e70a2
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diff
changeset
|
3542 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
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diff
changeset
|
3543 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3544 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3545 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
|
535e651e70a2
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473
diff
changeset
|
3546 |
|
535e651e70a2
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diff
changeset
|
3547 # Reset and test synchronous C-Move at series level |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3548 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3549 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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diff
changeset
|
3550 |
| 81 | 3551 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3552 'Resources' : [ | |
| 3553 { | |
| 3554 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3555 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3556 } | |
| 3557 ]}) | |
| 3558 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3559 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3560 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3561 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3562 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3563 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3564 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3565 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3566 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3567 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3568 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3569 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3570 'Level' : 'Series', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3571 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3572 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3573 'PatientID' : '5Yp0E', |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3574 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3575 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3576 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3577 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3578 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3579 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3580 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3581 self.assertNotEqual(None, job) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3582 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3583 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3584 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3585 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3586 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3587 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3588 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3589 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3590 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3591 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3592 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
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diff
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|
3593 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
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|
3594 |
|
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diff
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|
3595 # Move series Brainix/Epi/* |
| 81 | 3596 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3597 'Resources' : [ | |
| 3598 { | |
| 3599 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3600 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3601 } | |
| 3602 ]}) | |
| 3603 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3604 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3605 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3606 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3607 | |
|
482
535e651e70a2
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diff
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|
3608 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
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diff
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|
3609 # Move study Knee asynchronously |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3610 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
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diff
changeset
|
3611 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
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473
diff
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|
3612 'Level' : 'Study', |
|
535e651e70a2
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473
diff
changeset
|
3613 'Resources' : [ |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3614 { |
|
535e651e70a2
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diff
changeset
|
3615 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
|
535e651e70a2
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diff
changeset
|
3616 } |
|
535e651e70a2
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diff
changeset
|
3617 ], |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
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|
3618 'Asynchronous': True |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3619 })) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3620 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3621 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3622 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3623 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3624 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3625 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3626 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3627 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3628 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3629 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3630 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3631 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
| 81 | 3632 |
| 3633 # Reset | |
| 3634 for p in DoGet(_REMOTE, '/patients'): | |
| 3635 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3636 | |
| 3637 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3638 | |
| 3639 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3640 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3641 # Move all at once asynchronously at PatientLevel |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3642 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3643 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3644 'Level' : 'Patient', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3645 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3646 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3647 'PatientID' : '5Yp0E', |
| 81 | 3648 }, |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3649 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3650 'PatientID': '887', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3651 'PatientName' : 'KNEE', |
| 81 | 3652 } |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3653 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3654 'Synchronous': False |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3655 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3656 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3657 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3658 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3659 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3660 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
| 81 | 3661 |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3662 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3663 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3664 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3665 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3666 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3667 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3668 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3669 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3670 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3671 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3672 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3673 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3674 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3675 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3676 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3677 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3678 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3679 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3680 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3681 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3682 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3683 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3684 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3685 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3686 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3687 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3688 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3689 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3690 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3691 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3692 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3693 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3694 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3695 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3696 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3697 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3698 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3699 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3700 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3701 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3702 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3703 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3704 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3705 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3706 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3707 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3708 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3709 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3710 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3711 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3712 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3713 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3714 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3715 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3716 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3717 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3718 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3719 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3720 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3721 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3722 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3723 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3724 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3725 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3726 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3727 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3728 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3729 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3730 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3731 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3732 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3733 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3734 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3735 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3736 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3737 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3738 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3739 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3740 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3741 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3742 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3743 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3744 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3745 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3746 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3747 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3748 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3749 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3750 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3751 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3752 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3753 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3754 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3755 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3756 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3757 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3758 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3759 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3760 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3761 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3762 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3763 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3764 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3765 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3766 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3767 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3768 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3769 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3770 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3771 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3772 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3773 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3774 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3775 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3776 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3777 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3778 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3779 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3780 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3781 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3782 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3783 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3784 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3785 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3786 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3787 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3788 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3789 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3790 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3791 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3792 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3793 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3794 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3795 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3796 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3797 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3798 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3799 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3800 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3801 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3802 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3803 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3804 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3805 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3806 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3807 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3808 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3809 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3810 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3811 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3812 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3813 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3814 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3815 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3816 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3817 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3818 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3819 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3820 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3821 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3822 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3823 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3824 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3825 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3826 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3827 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3828 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3829 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3830 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3831 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3832 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3833 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3834 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3835 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3836 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3837 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3838 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3839 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3840 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3841 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3842 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3843 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3844 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3845 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3846 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3847 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3848 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3849 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3850 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3851 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3852 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3853 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3854 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3855 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3856 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3857 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3858 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3859 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3860 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3861 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3862 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3863 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3864 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3865 }, |
| 119 | 3866 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3867 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3868 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3869 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3870 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3871 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3872 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3873 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3874 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3875 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3876 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3877 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3878 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3879 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3880 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3881 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3882 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3883 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3884 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3885 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3886 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3887 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3888 # metadata before reconstruct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3889 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3890 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3891 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3892 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3893 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3894 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3895 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3896 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3897 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3898 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3899 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3900 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3901 # metadata after reconstruct should have been preserved |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3902 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3903 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3904 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3905 self.assertEqual(mba, maa) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3906 self.assertEqual(mbb, mab) |
|
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3907 |
|
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3908 |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
3909 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
| 104 | 3910 def test_httpClient_lua(self): |
| 496 | 3911 retries = 4 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3912 result = '' |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3913 |
| 104 | 3914 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
| 496 | 3915 scriptContent = f.read() |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3916 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3917 while retries > 0 and not ('OK' in result): |
| 496 | 3918 print("Executing lua script HttpClient.lua") |
| 3919 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3920 retries -= 1 |
| 102 | 3921 |
| 3922 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3923 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3924 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3925 def test_bitbucket_issue_44(self): |
| 319 | 3926 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3927 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3928 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3929 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3930 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3931 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3932 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3933 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3934 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3935 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3936 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3937 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3938 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3939 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3940 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3941 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3942 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3943 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3944 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3945 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3946 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3947 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3948 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3949 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3950 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3951 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3952 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3953 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3954 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3955 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3956 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3957 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3958 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3959 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3960 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3961 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3962 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3963 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3964 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3965 def test_bitbucket_issue_42(self): |
| 319 | 3966 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3967 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3968 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3969 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3970 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3971 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3972 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3973 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3974 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3975 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3976 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3977 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3978 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3979 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3980 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3981 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3982 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3983 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3984 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3985 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3986 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3987 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3988 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3989 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3990 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3991 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3992 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3993 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3994 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3995 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3996 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3997 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3998 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3999 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4000 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4001 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4002 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4003 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4004 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4005 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4006 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4007 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4008 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4009 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4010 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4011 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4012 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4013 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4014 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4015 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4016 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4017 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4018 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4019 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4020 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4021 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4022 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4023 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4024 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4025 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4026 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4027 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4028 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4029 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4030 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4031 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4032 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4033 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4034 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4035 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4036 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4037 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4038 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4039 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4040 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4041 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4042 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4043 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4044 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4045 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4046 # "PHI remaining after anonymization" |
| 319 | 4047 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
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test_bitbucket_issue_46
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diff
changeset
|
4048 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4049 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4050 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
4051 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4052 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4053 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4054 self.assertEqual(1, len(a)) |
|
45ebfab035b7
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parents:
113
diff
changeset
|
4055 |
|
45ebfab035b7
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113
diff
changeset
|
4056 instance = a[0]['ID'] |
|
45ebfab035b7
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diff
changeset
|
4057 |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4058 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
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diff
changeset
|
4059 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4060 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
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|
4061 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
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|
4062 |
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|
4063 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
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|
4064 # (Patient's Mother's Birth Name) tags |
|
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|
4065 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
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4066 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
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|
4067 'application/json')['ID'] |
|
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|
4068 |
|
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|
4069 # Use Table E.1-1 from PS 3.15-2008 |
|
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|
4070 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
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|
4071 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
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|
4072 self.assertTrue('0032,1033' in tags) |
|
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|
4073 self.assertTrue('0010,1060' in tags) |
|
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|
4074 |
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|
4075 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
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|
4076 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
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|
4077 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
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|
4078 self.assertFalse('0032,1033' in tags) |
|
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|
4079 self.assertFalse('0010,1060' in tags) |
|
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|
4080 |
|
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|
4081 t = {} |
|
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|
4082 for (key, value) in tags.iteritems(): |
|
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4083 t[value['Name']] = value['Value'] |
|
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4084 |
|
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|
4085 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
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|
4086 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
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|
4087 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
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|
4088 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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|
4089 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
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|
4090 |
|
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|
4091 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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|
4092 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
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|
4093 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
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|
4094 f.flush() |
|
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|
4095 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
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|
4096 stderr = subprocess.STDOUT).split('\n') |
|
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|
4097 |
|
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|
4098 |
|
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|
4099 def test_bitbucket_issue_55(self): |
|
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4100 def Run(modify, query): |
|
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|
4101 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
4102 |
|
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|
4103 operation = 'modify' if modify else 'anonymize' |
|
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4104 |
|
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|
4105 self.assertRaises(Exception, lambda: DoPost( |
|
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|
4106 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
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|
4107 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
4108 |
|
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|
4109 query["Force"] = True |
|
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|
4110 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
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|
4111 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
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|
4112 DoDelete(_REMOTE, a) |
|
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|
4113 |
|
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|
4114 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
4115 |
|
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|
4116 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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|
4117 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
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|
4118 |
|
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|
4119 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
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|
4120 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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|
4121 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
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|
4122 |
|
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|
4123 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
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|
4124 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
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|
4125 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
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|
4126 |
|
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changeset
|
4127 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
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|
4128 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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|
4129 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
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|
4130 |
|
120
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diff
changeset
|
4131 |
|
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diff
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|
4132 def test_bitbucket_issue_56(self): |
|
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|
4133 # Case-insensitive matching over accents. This test assumes |
|
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|
4134 # that the "CaseSensitivePN" configuration option of Orthanc |
|
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|
4135 # is set to "false" (default value). |
| 319 | 4136 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
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|
4137 |
|
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|
4138 def Check(name, expected, expectedSensitive): |
|
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|
4139 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
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|
4140 '-k', '0008,0052=PATIENT', |
|
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|
4141 '-k', 'PatientName=%s' % name ]) |
|
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|
4142 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
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|
4143 self.assertEqual(expected, len(patientNames)) |
|
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|
4144 |
|
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|
4145 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
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|
4146 'CaseSensitive' : False, |
|
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|
4147 'Query' : { 'PatientName' : name }}) |
|
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|
4148 self.assertEqual(expected, len(a)) |
|
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|
4149 |
|
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|
4150 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
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|
4151 'CaseSensitive' : True, |
|
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|
4152 'Query' : { 'PatientName' : name }}) |
|
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|
4153 self.assertEqual(expectedSensitive, len(a)) |
|
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|
4154 |
|
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|
4155 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
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|
4156 |
|
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|
4157 # WildcardConstraint |
|
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|
4158 Check('TeSt*', 1, 0) |
|
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|
4159 Check('TeSt-a*', 0, 0) |
|
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|
4160 Check('TeSt-É*', 1, 0) |
|
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|
4161 Check('TeSt-é*', 1, 0) |
|
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|
4162 Check('Test-é*', 1, 1) |
|
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|
4163 |
|
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|
4164 # ListConstraint |
|
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|
4165 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4166 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4167 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4168 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4169 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4170 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4171 |
| 125 | 4172 |
| 4173 def test_gbk_alias(self): | |
| 4174 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4175 # This test fails on Orthanc <= 1.3.0 | |
| 4176 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4177 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4178 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4179 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4180 |
| 4181 | |
| 4182 def test_long_tag(self): | |
| 4183 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4184 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4185 | |
| 4186 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4187 self.assertTrue('0018,1020' in tags) | |
| 4188 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4189 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4190 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4191 | |
| 4192 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4193 self.assertTrue('0018,1020' in tags) | |
| 4194 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4195 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4196 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4197 | |
| 4198 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4199 self.assertTrue('SoftwareVersions' in tags) | |
| 4200 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4201 self.assertTrue('HeartRate' in tags) | |
| 4202 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4203 | |
| 4204 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4205 self.assertTrue('SoftwareVersions' in tags) | |
| 4206 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4207 | |
| 4208 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4209 self.assertTrue('SoftwareVersions' in tags) | |
| 4210 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4211 | |
| 4212 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4213 self.assertTrue('SoftwareVersions' in tags) | |
| 4214 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4215 | |
| 4216 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4217 self.assertEqual(1, len(tags)) | |
| 4218 self.assertTrue(i in tags.keys()) | |
| 4219 self.assertTrue('0018,1020' in tags[i]) | |
| 4220 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4221 | |
| 4222 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4223 self.assertEqual(1, len(tags)) | |
| 4224 self.assertTrue(i in tags.keys()) | |
| 4225 self.assertTrue('0018,1020' in tags[i]) | |
| 4226 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4227 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4228 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4229 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4230 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4231 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4232 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4233 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4234 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4235 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4236 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4237 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4238 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4239 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4240 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4241 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4242 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4243 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4244 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4245 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4246 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4247 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4248 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4249 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4250 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4251 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4252 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4253 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4254 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4255 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4256 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4257 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4258 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4259 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4260 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4261 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4262 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4263 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4264 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4265 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4266 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4267 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4268 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4269 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4270 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4271 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4272 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4273 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4274 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4275 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4276 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4277 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4278 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4279 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4280 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4281 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4282 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4283 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4284 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4285 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4286 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4287 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4288 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4289 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4290 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4291 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4292 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4293 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4294 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4295 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4296 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4297 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4298 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4299 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4300 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4301 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4302 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4303 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4304 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4305 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4306 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4307 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4308 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4309 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4310 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4311 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4312 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4313 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4314 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4315 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4316 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4317 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4318 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4319 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4320 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4321 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4322 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4323 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4324 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4325 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4326 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4327 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4328 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4329 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4330 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4331 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4332 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4333 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4334 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4335 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4336 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4337 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4338 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4339 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4340 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4341 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4342 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4343 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4344 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4345 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4346 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4347 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4348 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4349 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4350 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4351 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4352 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4353 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4354 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4355 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4356 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4357 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4358 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4359 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4360 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4361 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4362 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4363 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4364 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4365 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4366 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4367 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4368 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4369 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4370 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4371 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4372 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4373 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4374 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4375 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4376 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4377 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4378 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4379 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4380 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4381 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4382 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4383 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4384 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4385 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4386 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4387 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4388 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4389 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4390 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4391 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4392 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4393 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4394 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4395 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4396 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4397 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4398 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4399 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4400 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4401 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
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|
4402 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
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|
4403 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
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changeset
|
4404 |
|
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test_anonymize_relationships_3
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changeset
|
4405 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
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changeset
|
4406 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
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changeset
|
4407 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
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test_anonymize_relationships_3
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changeset
|
4408 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
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test_anonymize_relationships_3
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changeset
|
4409 |
|
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test_anonymize_relationships_3
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diff
changeset
|
4410 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
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changeset
|
4411 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
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diff
changeset
|
4412 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
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test_anonymize_relationships_3
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diff
changeset
|
4413 |
|
f0d4c4707e64
test_anonymize_relationships_3
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diff
changeset
|
4414 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
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parents:
132
diff
changeset
|
4415 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
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diff
changeset
|
4416 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
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parents:
138
diff
changeset
|
4417 |
|
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4418 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4419 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4420 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4421 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4422 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4423 |
|
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4424 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4425 |
|
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4426 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4427 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
138
diff
changeset
|
4428 |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
138
diff
changeset
|
4429 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4430 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4431 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4432 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
138
diff
changeset
|
4433 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4434 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4435 self.assertEqual(1, len(b)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4436 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4437 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4438 self.assertEqual(1, len(c)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4439 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4440 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4441 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4442 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4443 |
|
28d50ffac07d
test_metadata_origin
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parents:
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diff
changeset
|
4444 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4445 # Upload using the REST API |
|
144
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4446 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4447 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4448 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4449 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4450 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4451 |
| 4452 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4453 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4454 | |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4455 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4456 self.assertEqual('RestApi', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4457 self.assertEqual('', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4458 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4459 self.assertFalse('CalledAET' in m) |
| 315 | 4460 self.assertTrue('HttpUsername' in m) |
| 4461 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4462 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4463 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4464 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4465 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4466 self.assertTrue('ReceptionDate' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4467 |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4468 DoDelete(_REMOTE, '/instances/%s' % i) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4469 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4470 # Upload using the DICOM protocol |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4471 subprocess.check_call([ FindExecutable('storescu'), |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4472 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4473 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4474 '-xw' ]) # Propose JPEG2000 |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4475 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4476 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4477 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4478 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4479 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4480 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4481 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4482 self.assertEqual('DicomProtocol', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4483 self.assertEqual('STORESCU', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4484 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4485 self.assertEqual('ANY-SCP', m['CalledAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4486 self.assertFalse('HttpUsername' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4487 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4488 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4489 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4490 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4491 self.assertTrue('ReceptionDate' in m) |
| 147 | 4492 |
| 4493 | |
| 4494 def test_lua_deadlock(self): | |
| 4495 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4496 # is with the lua script I'm using for conversion of images to | |
| 4497 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4498 # instance appears to be stored and then everything just | |
| 4499 # halts, ie Orthanc wont respond to anything after that." | |
| 4500 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4501 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4502 |
| 4503 subprocess.check_call([ FindExecutable('storescu'), | |
| 4504 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4505 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4506 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4507 ]) | |
| 4508 | |
| 4509 instances = DoGet(_REMOTE, '/instances') | |
| 4510 self.assertEqual(2, len(instances)) | |
| 4511 | |
| 4512 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4513 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4514 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4515 self.assertEqual(t1, t2); |
|
154
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147
diff
changeset
|
4516 |
|
4a533d003080
test_find_group_length
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147
diff
changeset
|
4517 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4518 def test_find_group_length(self): |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4519 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
4a533d003080
test_find_group_length
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147
diff
changeset
|
4520 # one of the Generic Group Length tags (*, 0x0000) |
|
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test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4521 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4a533d003080
test_find_group_length
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diff
changeset
|
4522 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4523 self.assertFalse('UnableToProcess' in result) |
|
4a533d003080
test_find_group_length
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diff
changeset
|
4524 self.assertFalse('E:' in result) |
|
179
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diff
changeset
|
4525 |
|
8a2dd77d4035
testing split/merge
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177
diff
changeset
|
4526 |
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|
4527 def test_split(self): |
|
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|
4528 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
4529 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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|
4530 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4531 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
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|
4532 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4533 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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diff
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|
4534 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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changeset
|
4535 |
|
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|
4536 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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|
4537 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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changeset
|
4538 |
|
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changeset
|
4539 info = DoGet(_REMOTE, '/studies/%s' % study) |
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|
4540 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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changeset
|
4541 |
|
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|
4542 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
4543 (_REMOTE, '/studies/%s/split' % study, { |
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changeset
|
4544 'Series' : [ t2 ], |
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|
4545 'Replace' : { 'PatientName' : 'Hello' }, |
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|
4546 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4547 'KeepSource' : False, |
| 4548 'Asynchronous' : True | |
|
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|
4549 })) |
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changeset
|
4550 |
|
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changeset
|
4551 self.assertNotEqual(None, job) |
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changeset
|
4552 |
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changeset
|
4553 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4554 self.assertEqual(2, len(studies)) |
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changeset
|
4555 |
|
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changeset
|
4556 series = set(DoGet(_REMOTE, '/series')) |
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changeset
|
4557 self.assertEqual(2, len(series)) |
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|
4558 self.assertTrue(t1 in series) |
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changeset
|
4559 |
|
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changeset
|
4560 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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changeset
|
4561 self.assertTrue(study in studies) |
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|
4562 self.assertTrue(study2 in studies) |
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changeset
|
4563 |
|
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changeset
|
4564 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4565 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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changeset
|
4566 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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changeset
|
4567 |
|
254
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changeset
|
4568 sopInstanceUids = set() |
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changeset
|
4569 for i in DoGet(_REMOTE, '/instances?expand'): |
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changeset
|
4570 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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changeset
|
4571 |
|
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changeset
|
4572 self.assertTrue(knee1Sop in sopInstanceUids) |
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changeset
|
4573 |
|
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changeset
|
4574 # Fails if Orthanc <= 1.5.7 |
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|
4575 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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changeset
|
4576 |
|
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changeset
|
4577 # One original instance is kept, another one is added because of the split |
|
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changeset
|
4578 self.assertEqual(2, len(sopInstanceUids)) |
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changeset
|
4579 |
|
179
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changeset
|
4580 |
|
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changeset
|
4581 def test_merge(self): |
|
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changeset
|
4582 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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changeset
|
4583 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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changeset
|
4584 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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diff
changeset
|
4585 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
179
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diff
changeset
|
4586 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
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changeset
|
4587 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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diff
changeset
|
4588 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
|
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diff
changeset
|
4589 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
|
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diff
changeset
|
4590 |
|
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diff
changeset
|
4591 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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changeset
|
4592 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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diff
changeset
|
4593 |
|
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changeset
|
4594 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
4595 (_REMOTE, '/studies/%s/merge' % knee, { |
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diff
changeset
|
4596 'Resources' : [ brainix ], |
| 181 | 4597 'KeepSource' : True, |
| 4598 'Synchronous' : False | |
|
179
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diff
changeset
|
4599 })) |
|
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diff
changeset
|
4600 |
|
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diff
changeset
|
4601 self.assertNotEqual(None, job) |
|
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diff
changeset
|
4602 |
|
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diff
changeset
|
4603 studies = set(DoGet(_REMOTE, '/studies')) |
|
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diff
changeset
|
4604 self.assertEqual(2, len(studies)) |
|
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diff
changeset
|
4605 self.assertTrue(knee in studies) |
|
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diff
changeset
|
4606 self.assertTrue(brainix in studies) |
|
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diff
changeset
|
4607 |
|
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changeset
|
4608 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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changeset
|
4609 self.assertTrue(t1 in series) |
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diff
changeset
|
4610 series.remove(t1) |
|
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changeset
|
4611 self.assertEqual(1, len(series)) |
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changeset
|
4612 |
|
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changeset
|
4613 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
|
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changeset
|
4614 self.assertEqual(1, len(instances)) |
|
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changeset
|
4615 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4616 |
|
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diff
changeset
|
4617 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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changeset
|
4618 self.assertEqual(1, len(instances)) |
|
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changeset
|
4619 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4620 |
|
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changeset
|
4621 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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changeset
|
4622 self.assertEqual(1, len(instances)) |
|
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changeset
|
4623 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4624 |
|
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changeset
|
4625 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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changeset
|
4626 |
|
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changeset
|
4627 for key in tags['PatientMainDicomTags']: |
|
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|
4628 self.assertEqual(a[key], merged[key]) |
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|
4629 if (key in b and key != 'PatientSex'): |
|
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|
4630 self.assertNotEqual(a[key], b[key]) |
|
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changeset
|
4631 |
|
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changeset
|
4632 for key in tags['MainDicomTags']: |
|
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|
4633 # Not in the patient/study module |
|
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|
4634 if (not key in [ 'InstitutionName', |
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4635 'RequestingPhysician', |
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4636 'RequestedProcedureDescription', ]): |
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4637 self.assertEqual(a[key], merged[key]) |
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4638 if (key in b): |
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4639 self.assertNotEqual(a[key], b[key]) |
|
254
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4640 |
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4641 sopInstanceUids = set() |
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4642 for i in DoGet(_REMOTE, '/instances?expand'): |
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4643 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4644 |
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4645 self.assertTrue(kneeSop in sopInstanceUids) |
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4646 self.assertTrue(brainixSop in sopInstanceUids) |
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4647 |
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4648 # Fails if Orthanc <= 1.5.7 |
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4649 # The 2 original instances are kept, another one is added because of the merge |
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4650 self.assertEqual(3, len(sopInstanceUids)) |
|
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4651 |
| 187 | 4652 |
| 4653 def test_async_archive(self): | |
| 4654 # Testing the asynchronous generation of archives/medias (new | |
| 4655 # in Orthanc 1.4.3) | |
| 4656 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4657 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4658 | |
| 4659 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4660 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4661 | |
| 4662 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 508 | 4663 (_REMOTE, '/series/%s/archive' % kneeT1, { |
| 187 | 4664 'Synchronous' : False |
| 4665 })) | |
| 4666 | |
| 4667 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4668 self.assertEqual(1, len(z.namelist())) | |
| 4669 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4670 | |
|
354
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|
4671 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4672 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4673 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4674 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4675 |
| 187 | 4676 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 508 | 4677 (_REMOTE, '/series/%s/media' % kneeT1, { |
| 187 | 4678 'Synchronous' : False |
| 4679 })) | |
| 4680 | |
| 4681 # The archive from the first job has been replaced by the | |
| 4682 # archive from second job (as MediaArchiveSize == 1) | |
| 4683 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4684 | |
| 4685 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4686 self.assertEqual(2, len(z.namelist())) | |
| 4687 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4688 | |
|
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|
4689 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4690 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4691 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4692 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4693 |
| 187 | 4694 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4695 (_REMOTE, '/tools/create-archive', { | |
| 4696 'Synchronous' : False, | |
| 4697 'Resources' : [ kneeT1, kneeT2 ], | |
| 4698 })) | |
| 4699 | |
| 4700 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4701 self.assertEqual(2, len(z.namelist())) | |
| 4702 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4703 | |
|
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4704 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4705 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4706 self.assertEqual(2, info['Content']['InstancesCount']) |
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4707 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4708 |
| 187 | 4709 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4710 (_REMOTE, '/tools/create-media', { | |
| 4711 'Synchronous' : False, | |
| 4712 'Resources' : [ kneeT1, kneeT2 ], | |
| 4713 })) | |
| 4714 | |
| 4715 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4716 self.assertEqual(3, len(z.namelist())) | |
| 4717 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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4718 |
|
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|
4719 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4720 self.assertEqual(2, info['Content']['InstancesCount']) |
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4721 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4722 |
| 187 | 4723 |
|
188
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|
4724 def test_queries_hierarchy(self): |
|
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|
4725 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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|
4726 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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4727 |
|
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|
4728 tags = { |
|
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4729 'NumberOfPatientRelatedInstances' : '', |
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|
4730 'NumberOfPatientRelatedSeries' : '', |
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4731 'NumberOfPatientRelatedStudies' : '', |
|
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|
4732 'NumberOfStudyRelatedInstances' : '', |
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|
4733 'NumberOfStudyRelatedSeries' : '', |
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|
4734 'NumberOfSeriesRelatedInstances' : '', |
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|
4735 } |
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|
4736 |
|
189
11719f19bd62
test_dicom_disk_size
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diff
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|
4737 tags2 = copy.copy(tags) |
|
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|
4738 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
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|
4739 |
|
188
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4740 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
4741 'Level' : 'Patient', |
|
189
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|
4742 'Query' : tags2 |
|
188
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|
4743 }) ['ID'] |
|
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4744 |
|
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|
4745 study = DoPost(_REMOTE, '/modalities/self/query', { |
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|
4746 'Level' : 'Study', |
|
189
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|
4747 'Query' : tags2 |
|
188
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|
4748 }) ['ID'] |
|
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4749 |
|
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|
4750 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
4751 'Level' : 'Series', |
|
189
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4752 'Query' : tags2 |
|
188
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4753 }) ['ID'] |
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4754 |
|
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|
4755 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
4756 'Level' : 'Instance', |
|
189
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4757 'Query' : tags2 |
|
188
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4758 }) ['ID'] |
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4759 |
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|
4760 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
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|
4761 self.assertEqual(1, len(p)) |
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|
4762 self.assertEqual('887', p[0]['PatientID']) |
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|
4763 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
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|
4764 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
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|
4765 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
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|
4766 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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|
4767 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
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|
4768 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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|
4769 |
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|
4770 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
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4771 self.assertEqual(1, len(p)) |
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|
4772 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
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|
4773 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
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4774 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
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|
4775 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4776 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
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4777 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4778 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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changeset
|
4779 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4780 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4781 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4782 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4783 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4784 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4785 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4786 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4787 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4788 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4789 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4790 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4791 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4792 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4793 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4794 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4795 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4796 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4797 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4798 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4799 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4800 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4801 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4802 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4803 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4804 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4805 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4806 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4807 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4808 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4809 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4810 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4811 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4812 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4813 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4814 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4815 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4816 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4817 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4818 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4819 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4820 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4821 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4822 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4823 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4824 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4825 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4826 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4827 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4828 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4829 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4830 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4831 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4832 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4833 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4834 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4835 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4836 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4837 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4838 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4839 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4840 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4841 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4842 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4843 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4844 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4845 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4846 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4847 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4848 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4849 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4850 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4851 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4852 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4853 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4854 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4855 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4856 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4857 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4858 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4859 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4860 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4861 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4862 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4863 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4864 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4865 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4866 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4867 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4868 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4869 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4870 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4871 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4872 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4873 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4874 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4875 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4876 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4877 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4878 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4879 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4880 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4881 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4882 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4883 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4884 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4885 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4886 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4887 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4888 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4889 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4890 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4891 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4892 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4893 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4894 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4895 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4896 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4897 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4898 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4899 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4900 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4901 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4902 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4903 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4904 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4905 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4906 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4907 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4908 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4909 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4910 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4911 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4912 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4913 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4914 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4915 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4916 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4917 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4918 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4919 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4920 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4921 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4922 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4923 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4924 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4925 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4926 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4927 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4928 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4929 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4930 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4931 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4932 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4933 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4934 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4935 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4936 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4937 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4938 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4939 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4940 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4941 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4942 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4943 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4944 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4945 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4946 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4947 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4948 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4949 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4950 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4951 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4952 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4953 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4954 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4955 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4956 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4957 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4958 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
| 508 | 4959 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
| 4960 | |
| 4961 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4962 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4963 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4964 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4965 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4966 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4967 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4968 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4969 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4970 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4971 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4972 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4973 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4974 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4975 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4976 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4977 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4978 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4979 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4980 |
|
2444c9a7c422
test_bitbucket_issue_90
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4981 # Just like the "CR000000.dcm" of the issue, the test image |
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4982 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
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4983 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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4984 |
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4985 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
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4986 |
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4987 # In wildcard constraints, the patient sex must be set for a match to occur |
|
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4988 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
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4989 self.assertEqual(0, CountRestResults('*')) |
|
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4990 |
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4991 # In single-valued constraints, the patient sex must be set |
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4992 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
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4993 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
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4994 self.assertEqual(0, CountRestResults('F')) |
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4995 self.assertEqual(0, CountRestResults('M')) |
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4996 |
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4997 # Empty constraints are only used to ask the actual value of |
|
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4998 # the tag to be added to the *answer*. The tag should not used |
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4999 # as a filter in such a situation. |
|
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5000 self.assertEqual(1, CountDicomResults('PatientSex')) |
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5001 self.assertEqual(1, CountDicomResults('PatientSex=')) |
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5002 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
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5003 |
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5004 |
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5005 def test_rest_modalities_in_study(self): |
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5006 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
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5007 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
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5008 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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5009 |
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5010 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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5011 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
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5012 self.assertEqual(0, len(a)) |
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5013 |
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5014 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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5015 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
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5016 self.assertEqual(1, len(a)) |
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5017 |
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5018 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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5019 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
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5020 self.assertEqual(1, len(a)) |
| 211 | 5021 |
| 5022 | |
| 5023 def test_series_status(self): | |
| 5024 def HasCompletedInChanges(): | |
| 5025 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 5026 if c['ChangeType'] == 'CompletedSeries': | |
| 5027 return True; | |
| 5028 | |
| 5029 return False | |
| 5030 | |
| 5031 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 5032 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 5033 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5034 self.assertFalse(HasCompletedInChanges()) | |
| 5035 | |
| 5036 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 5037 | |
| 5038 for i in range(3): | |
| 5039 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 5040 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5041 self.assertFalse(HasCompletedInChanges()) | |
| 5042 | |
| 5043 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 5044 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5045 self.assertTrue(HasCompletedInChanges()) | |
| 5046 | |
| 5047 DoDelete(_REMOTE, '/changes') | |
| 5048 self.assertFalse(HasCompletedInChanges()) | |
| 5049 | |
| 5050 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 5051 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5052 self.assertFalse(HasCompletedInChanges()) | |
| 5053 | |
| 215 | 5054 |
| 5055 def test_dicomweb(self): | |
| 5056 def Compare(dicom, reference): | |
| 5057 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5058 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 5059 headers = { 'Accept' : 'application/dicom+json' }) | |
| 5060 with open(GetDatabasePath(reference), 'rb') as c: | |
| 5061 d = json.load(c) | |
| 220 | 5062 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 5063 |
| 5064 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 5065 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 5066 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 5067 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 5068 |
| 5069 | |
| 5070 def test_issue_95_encodings(self): | |
| 319 | 5071 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 5072 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 5073 | |
| 5074 # Very useful tool: "file2" from package "file-kanji" | |
| 5075 | |
| 5076 def GetPatientName(dicom): | |
| 5077 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5078 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 5079 return j['PatientName'] | |
| 5080 | |
| 5081 def ComparePatientName(name, dicom): | |
| 5082 self.assertEqual(name, GetPatientName(dicom)) | |
| 5083 | |
| 5084 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5085 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 5086 | |
| 5087 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 5088 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 5089 | |
| 5090 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 5091 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 5092 | |
| 5093 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 5094 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 5095 | |
| 5096 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 5097 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 5098 | |
| 5099 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5100 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 5101 | |
| 5102 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 5103 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 5104 | |
| 5105 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 5106 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 5107 | |
| 5108 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 5109 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 5110 # Linux console into Emacs automatically reverse the string | |
| 5111 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 5112 | |
| 5113 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 5114 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 5115 # characters by default, but copy/paste works with Emacs | |
| 5116 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 5117 | |
| 5118 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 5119 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 5120 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 5121 # remainer. Orthanc only takes into consideration the first | |
| 5122 # codepage: This is a limitation. | |
| 5123 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 5124 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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5125 |
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5126 |
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|
5127 def test_findscu_missing_tags(self): |
|
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|
5128 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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5129 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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5130 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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5131 |
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|
5132 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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5133 |
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5134 # We have 2 instances... |
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5135 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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5136 self.assertEqual(2, len(patientNames)) |
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5137 self.assertEqual('KNIX', patientNames[0]) |
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5138 self.assertEqual('KNIX', patientNames[1]) |
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5139 |
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5140 # ...but only 1 value for the "Rows" tag |
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|
5141 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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5142 self.assertEqual(1, len(rows)) |
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5143 self.assertEqual('512', rows[0]) |
|
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5144 |
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5145 |
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5146 |
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5147 def test_bitbucket_issue_131(self): |
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5148 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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5149 # StudyInstanceUID in it's database." |
| 319 | 5150 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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5151 |
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5152 # Insert 2 instances, with the same StudyInstanceUID, but with |
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5153 # different patient IDs. Orthanc will create 2 distincts |
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5154 # patients, and the hierarchy of resources above the two |
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5155 # instances will be fully disjoint. |
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5156 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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5157 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
|
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|
5158 |
|
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diff
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|
5159 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
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|
5160 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
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|
5161 |
|
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diff
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|
5162 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
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|
5163 'Level' : 'Study', |
|
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diff
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|
5164 'Query' : {"PatientID": "A" }})['ID'] |
|
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diff
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|
5165 |
|
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diff
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|
5166 # 1 study is matched |
|
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diff
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|
5167 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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diff
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|
5168 |
|
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diff
changeset
|
5169 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5170 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5171 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5172 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
changeset
|
5173 |
|
00e5aeea33dd
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diff
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|
5174 # The two studies are matched, as we made the request at the |
|
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diff
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|
5175 # Study level, thus the shared StudyInstanceUID is used as the key |
|
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|
5176 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
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|
5177 |
|
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test_bitbucket_issue_131
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diff
changeset
|
5178 |
|
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diff
changeset
|
5179 # Match the 2 studies |
|
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diff
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|
5180 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
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|
5181 'Level' : 'Study', |
|
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diff
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|
5182 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
|
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diff
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|
5183 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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diff
changeset
|
5184 DropOrthanc(_LOCAL) |
|
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diff
changeset
|
5185 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5186 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5187 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5188 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
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|
5189 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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test_bitbucket_issue_131
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diff
changeset
|
5190 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5191 |
|
00e5aeea33dd
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diff
changeset
|
5192 # Same test, at the patient level => only 1 instance is transfered |
|
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diff
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|
5193 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
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|
5194 'Level' : 'Patient', |
|
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diff
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|
5195 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
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diff
changeset
|
5196 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5197 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5198 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5199 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5200 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5201 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
changeset
|
5202 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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test_bitbucket_issue_131
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218
diff
changeset
|
5203 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5204 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5205 # Same test, at the series level => only 1 instance is transfered |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5206 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5207 'Level' : 'Series', |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5208 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5209 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5210 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5211 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5212 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5213 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5214 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5215 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5216 |
|
233
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5217 |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5218 def test_bitbucket_issue_136(self): |
|
ce0b19a2c807
test_bitbucket_issue_136
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parents:
231
diff
changeset
|
5219 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5220 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5221 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
ce0b19a2c807
test_bitbucket_issue_136
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parents:
231
diff
changeset
|
5222 self.assertEqual(1, len(patientNames)) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5223 self.assertEqual('John Doe', patientNames[0]) |
|
234
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5224 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5225 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5226 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5227 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5228 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5229 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5230 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5231 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5232 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5233 'application/json')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5234 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5235 self.assertEqual(2, len(series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5236 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5237 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5238 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5239 self.assertEqual(1, len(cr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5240 self.assertEqual(1, len(pr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5241 self.assertEqual(1, len(cr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5242 self.assertEqual(1, len(pr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5243 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5244 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5245 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5246 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5247 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
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233
diff
changeset
|
5248 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
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233
diff
changeset
|
5249 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5250 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5251 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5252 # This fails on Orthanc <= 1.5.6 |
|
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diff
changeset
|
5253 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5254 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5255 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
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234
diff
changeset
|
5256 |
|
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5257 def test_anonymize_relationships_5(self): |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
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parents:
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diff
changeset
|
5258 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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added anonymization test for RTH data (currently failing)
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parents:
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diff
changeset
|
5259 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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added anonymization test for RTH data (currently failing)
amazy
parents:
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diff
changeset
|
5260 oStudyId = ct1['ParentStudy'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5261 oCtInstanceId = ct1['ID'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5262 oRtInstanceId = rt1['ID'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5263 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
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254
diff
changeset
|
5264 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
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added anonymization test for RTH data (currently failing)
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parents:
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diff
changeset
|
5265 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5266 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5267 # first validate the relationships in the source data |
|
02c3d91b155c
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5268 oStudyUID = oCtTags['StudyInstanceUID'] |
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5269 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
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5270 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
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5271 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5272 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
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5273 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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5274 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
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5275 |
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5276 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5277 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
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5278 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
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5279 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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5280 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5281 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5282 |
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5283 ### anonymize |
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5284 |
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5285 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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5286 'application/json')['ID'] |
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5287 |
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5288 ### validate |
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5289 |
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5290 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
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5291 self.assertEqual(2, len(aSeries)) |
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5292 |
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5293 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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5294 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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5295 aCtInstanceId = aCt[0]['Instances'][0] |
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5296 aRtInstanceId = aRt[0]['Instances'][0] |
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5297 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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5298 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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5299 |
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5300 # now validate the relationships in the anonymized data |
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5301 aStudyUID = aCtTags['StudyInstanceUID'] |
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5302 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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5303 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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5304 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5305 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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5306 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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5307 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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5308 |
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5309 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5310 # make sure all UIDs have been updated |
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5311 self.assertNotEqual(oStudyUID, aStudyUID) |
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5312 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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5313 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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|
5314 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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5315 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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5316 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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|
5317 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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5318 |
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|
5319 # validate the relationships |
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|
5320 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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|
5321 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5322 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5323 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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|
5324 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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|
5325 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5326 |
| 256 | 5327 def test_anonymize_relationships_5b(self): |
| 5328 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5329 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5330 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5331 oStudyId = ct1['ParentStudy'] | |
| 5332 oCtInstanceId = ct1['ID'] | |
| 5333 oRtInstanceId = rt1['ID'] | |
| 5334 | |
| 5335 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5336 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5337 | |
| 5338 ### anonymize while forcing the StudyInstanceUID | |
| 5339 | |
| 5340 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5341 'application/json')['ID'] | |
| 5342 | |
| 5343 ### validate | |
| 5344 | |
| 5345 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5346 self.assertEqual(2, len(aSeries)) | |
| 5347 | |
| 5348 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5349 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5350 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5351 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5352 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5353 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5354 | |
| 5355 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5356 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5357 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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5358 |
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5359 |
|
235
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|
5360 def test_bitbucket_issue_140(self): |
| 266 | 5361 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5362 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5363 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
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|
5364 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
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|
5365 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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5366 |
|
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|
5367 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5368 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5369 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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|
5370 }, 'application/json') ['ID'] |
|
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5371 |
|
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|
5372 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
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|
5373 self.assertEqual(1, len(instances)) |
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5374 |
|
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|
5375 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
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|
5376 t = tags['4321,1012'] |
|
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|
5377 self.assertEqual('String', t['Type']) |
|
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|
5378 self.assertEqual('RadioButton3', t['Name']) |
|
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|
5379 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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|
5380 self.assertEqual('jklmopq', t['Value']) |
|
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5381 |
|
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|
5382 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
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|
5383 t = tags['4321,1012'] |
| 327 | 5384 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
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|
5385 self.assertEqual('RadioButton3', t['Name']) |
|
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|
5386 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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|
5387 self.assertEqual('aaabbbccc', t['Value']) |
|
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5388 |
|
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5389 |
|
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|
5390 def test_find_normalize(self): |
|
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|
5391 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
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5392 |
|
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changeset
|
5393 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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5394 |
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|
5395 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5396 'Level' : 'Instance', |
|
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5397 'Query' : { 'Rows' : '42' } |
|
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5398 }) ['ID'] |
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5399 |
|
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|
5400 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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5401 self.assertEqual(1, len(b)) |
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5402 self.assertFalse('Rows' in b[0]) |
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5403 |
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|
5404 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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235
diff
changeset
|
5405 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5406 'Query' : { 'Rows' : '42' }, |
|
2de1aec255ae
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diff
changeset
|
5407 'Normalize' : False |
|
2de1aec255ae
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diff
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|
5408 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5409 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5410 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
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diff
changeset
|
5411 self.assertEqual(0, len(b)) |
|
2de1aec255ae
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235
diff
changeset
|
5412 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
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235
diff
changeset
|
5413 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5414 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5415 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5416 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5417 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5418 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5419 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
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diff
changeset
|
5420 self.assertEqual(1, len(b)) |
|
2de1aec255ae
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diff
changeset
|
5421 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
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diff
changeset
|
5422 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5423 |
| 5424 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5425 'Level' : 'Instance', | |
| 5426 'Query' : { 'Rows' : '' }, | |
| 5427 'Normalize' : False | |
| 5428 }) ['ID'] | |
| 5429 | |
| 5430 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5431 self.assertEqual(1, len(b)) | |
| 5432 self.assertTrue('Rows' in b[0]) | |
| 5433 self.assertEqual('512', b[0]['Rows']) | |
| 5434 | |
| 5435 self.assertRaises(Exception, lambda: DoPost( | |
| 5436 _REMOTE, '/modalities/self/query', { | |
| 5437 'Level' : 'Instance', | |
| 5438 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5439 'Normalize' : False | |
| 5440 })) | |
|
243
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test_bitbucket_issue_141
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237
diff
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|
5441 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5442 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5443 def test_bitbucket_issue_141(self): |
| 319 | 5444 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
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diff
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|
5445 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
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diff
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|
5446 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5447 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5448 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
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diff
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|
5449 pdf = f.read() |
|
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test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5450 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5451 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
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parents:
237
diff
changeset
|
5452 'Parent' : study, |
|
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test_bitbucket_issue_141
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237
diff
changeset
|
5453 'Tags' : {}, |
|
cccf697a4e13
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237
diff
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|
5454 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
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test_bitbucket_issue_141
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diff
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|
5455 }) ['ID'] |
|
cccf697a4e13
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parents:
237
diff
changeset
|
5456 |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5457 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5458 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5459 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5460 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5461 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5462 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5463 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5464 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5465 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
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243
diff
changeset
|
5466 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5467 |
| 5468 | |
| 5469 def test_log_level(self): | |
| 319 | 5470 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5471 original = DoGet(_REMOTE, '/tools/log-level') |
| 5472 | |
| 5473 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5474 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5475 DoGet(_REMOTE, '/system') | |
| 5476 | |
| 5477 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5478 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5479 DoGet(_REMOTE, '/system') | |
| 5480 | |
| 5481 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5482 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5483 DoGet(_REMOTE, '/system') | |
| 5484 | |
| 5485 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5486 | |
| 5487 # Switch back to the original log level | |
| 5488 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5489 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5490 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5491 def test_upload_compressed(self): |
| 265 | 5492 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5493 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
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263
diff
changeset
|
5494 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5495 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5496 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5497 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5498 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5499 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5500 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5501 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5502 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5503 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5504 |
| 5505 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5506 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5507 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5508 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5509 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5510 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5511 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5512 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5513 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5514 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5515 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5516 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5517 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5518 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5519 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5520 'Level' : 'Study', |
|
a2719263fd04
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262
diff
changeset
|
5521 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5522 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5523 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5524 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
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parents:
262
diff
changeset
|
5525 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5526 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5527 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5528 ## |
|
a2719263fd04
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diff
changeset
|
5529 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
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diff
changeset
|
5530 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
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diff
changeset
|
5531 ## |
|
a2719263fd04
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diff
changeset
|
5532 |
|
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5533 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
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diff
changeset
|
5534 # is wiped out by the normalization |
|
a2719263fd04
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diff
changeset
|
5535 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
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262
diff
changeset
|
5536 'Level' : 'Study', |
|
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262
diff
changeset
|
5537 'Query' : { |
|
a2719263fd04
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diff
changeset
|
5538 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
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parents:
262
diff
changeset
|
5539 }, |
|
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5540 'Normalize' : False |
|
a2719263fd04
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parents:
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diff
changeset
|
5541 })) |
|
a2719263fd04
test_study_series_find_inconsistency
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parents:
262
diff
changeset
|
5542 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5543 # This test fails on Orthanc <= 1.5.8 |
|
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parents:
262
diff
changeset
|
5544 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5545 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5546 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5547 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5548 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5549 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5550 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5551 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5552 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5553 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5554 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5555 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5556 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5557 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5558 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5559 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5560 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5561 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5562 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5563 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5564 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5565 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5566 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5567 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5568 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5569 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5570 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5571 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5572 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5573 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5574 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5575 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5576 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5577 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5578 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5579 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5580 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5581 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5582 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5583 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5584 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5585 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5586 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5587 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5588 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5589 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5590 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5591 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5592 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5593 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5594 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5595 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5596 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5597 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5598 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5599 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5600 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5601 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5602 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5603 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5604 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5605 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5606 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5607 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5608 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5609 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5610 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5611 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5612 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5613 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5614 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5615 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5616 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5617 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5618 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5619 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5620 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5621 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5622 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5623 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5624 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5625 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5626 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5627 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5628 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5629 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5630 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5631 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5632 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5633 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5634 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5635 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5636 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5637 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5638 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5639 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5640 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5641 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5642 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5643 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5644 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5645 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5646 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5647 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5648 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5649 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5650 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5651 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5652 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5653 # At the series level, the "ProtocolName" tag is allowed, and |
|
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5654 # normalization has no effect |
|
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5655 |
|
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5656 self.assertEqual(1, CountAnswers({ |
|
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5657 'Level' : 'Series', |
|
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5658 'Query' : { |
|
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5659 'ProtocolName' : '' # Universal matching |
|
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|
5660 }, |
|
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|
5661 'Normalize' : normalize, |
|
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|
5662 })) |
|
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|
5663 self.assertEqual(0, CountAnswers({ |
|
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|
5664 'Level' : 'Series', |
|
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|
5665 'Query' : { |
|
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|
5666 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
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|
5667 }, |
|
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|
5668 'Normalize' : normalize, |
|
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|
5669 })) |
|
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|
5670 self.assertEqual(0, CountAnswers({ |
|
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|
5671 'Level' : 'Series', |
|
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|
5672 'Query' : { |
|
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|
5673 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
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|
5674 }, |
|
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|
5675 'Normalize' : normalize, |
|
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|
5676 })) |
|
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|
5677 |
|
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|
5678 self.assertEqual(1, CountAnswers({ |
|
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|
5679 'Level' : 'Study', |
|
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|
5680 'Query' : { |
|
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|
5681 'ProtocolName' : '' # Universal matching |
|
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|
5682 }, |
|
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|
5683 'Normalize' : normalize, |
|
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|
5684 })) |
|
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|
5685 |
|
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|
5686 |
|
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|
5687 ## |
|
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|
5688 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
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5689 ## |
|
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|
5690 |
|
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|
5691 for level in [ 'Study', 'Series' ] : |
|
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|
5692 for normalize in [ True, False ]: |
|
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|
5693 self.assertEqual(1, CountAnswers({ |
|
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|
5694 'Level' : level, |
|
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|
5695 'Query' : { |
|
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|
5696 'StudyInstanceUID' : '' # Universal matching |
|
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|
5697 }, |
|
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|
5698 'Normalize' : normalize, |
|
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|
5699 })) |
|
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|
5700 self.assertEqual(0, CountAnswers({ |
|
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|
5701 'Level' : level, |
|
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|
5702 'Query' : { |
|
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|
5703 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
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|
5704 }, |
|
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|
5705 'Normalize' : normalize, |
|
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|
5706 })) |
|
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|
5707 self.assertEqual(1, CountAnswers({ |
|
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|
5708 'Level' : level, |
|
a2719263fd04
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|
5709 'Query' : { |
|
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|
5710 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
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|
5711 }, |
|
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|
5712 'Normalize' : normalize, |
|
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|
5713 })) |
|
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|
5714 |
| 269 | 5715 # Wildcard matching is not allowed for this VR |
|
263
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|
5716 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5717 self.assertRaises(Exception, lambda: CountAnswers({ |
|
263
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|
5718 'Level' : level, |
|
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|
5719 'Query' : { |
| 269 | 5720 'StudyInstanceUID' : '*' |
|
263
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|
5721 }, |
|
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|
5722 'Normalize' : normalize, |
|
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|
5723 })) |
| 265 | 5724 |
| 5725 | |
| 5726 def test_rendered(self): | |
| 5727 # New in Orthanc 1.6.0 | |
| 5728 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5729 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5730 self.assertEqual("RGB", im.mode) | |
| 5731 self.assertEqual(41, im.size[0]) | |
| 5732 self.assertEqual(41, im.size[1]) | |
| 5733 | |
| 5734 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5735 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5736 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5737 | |
| 5738 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5739 self.assertEqual("RGB", im.mode) | |
| 5740 self.assertEqual(10, im.size[0]) | |
| 5741 self.assertEqual(10, im.size[1]) | |
| 5742 | |
| 5743 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5744 self.assertEqual("RGB", im.mode) | |
| 5745 self.assertEqual(10, im.size[0]) | |
| 5746 self.assertEqual(10, im.size[1]) | |
| 5747 | |
| 5748 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5749 self.assertEqual("RGB", im.mode) | |
| 5750 self.assertEqual(128, im.size[0]) | |
| 5751 self.assertEqual(128, im.size[1]) | |
| 5752 | |
| 5753 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5754 self.assertEqual("RGB", im.mode) | |
| 5755 self.assertEqual(10, im.size[0]) | |
| 5756 self.assertEqual(10, im.size[1]) | |
| 5757 | |
| 5758 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5759 self.assertEqual("RGB", im.mode) | |
| 5760 self.assertEqual(10, im.size[0]) | |
| 5761 self.assertEqual(10, im.size[1]) | |
| 5762 | |
| 5763 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5764 self.assertEqual("RGB", im.mode) | |
| 5765 self.assertEqual(5, im.size[0]) | |
| 5766 self.assertEqual(5, im.size[1]) | |
| 5767 | |
| 5768 | |
| 5769 # Grayscale image | |
| 5770 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5771 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5772 self.assertEqual("L", im.mode) | |
| 5773 self.assertEqual(288, im.size[0]) | |
| 5774 self.assertEqual(288, im.size[1]) | |
| 5775 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5776 | |
| 5777 # Those are the original windowing parameters that are written | |
| 5778 # inside the DICOM file | |
| 5779 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5780 self.assertEqual("L", im2.mode) | |
| 5781 self.assertEqual(288, im2.size[0]) | |
| 5782 self.assertEqual(288, im2.size[1]) | |
| 5783 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5784 | |
| 5785 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5786 self.assertEqual("L", im.mode) | |
| 5787 self.assertEqual(512, im.size[0]) | |
| 5788 self.assertEqual(512, im.size[1]) | |
| 5789 | |
| 5790 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5791 self.assertEqual("L", im.mode) | |
| 5792 self.assertEqual(10, im.size[0]) | |
| 5793 self.assertEqual(10, im.size[1]) | |
| 5794 | |
| 5795 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5796 self.assertEqual("L", im.mode) | |
| 5797 self.assertEqual(10, im.size[0]) | |
| 5798 self.assertEqual(10, im.size[1]) | |
| 5799 | |
| 5800 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5801 self.assertEqual("L", im.mode) | |
| 5802 self.assertEqual(1, im.size[0]) | |
| 5803 self.assertEqual(1, im.size[1]) | |
| 5804 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5805 | |
| 5806 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5807 self.assertEqual("L", im.mode) | |
| 5808 self.assertEqual(1, im.size[0]) | |
| 5809 self.assertEqual(1, im.size[1]) | |
| 5810 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5811 | |
| 5812 | |
| 5813 # Test monochrome 1 | |
| 5814 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5815 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5816 self.assertEqual("L", im.mode) | |
| 5817 self.assertEqual(2010, im.size[0]) | |
| 5818 self.assertEqual(2446, im.size[1]) | |
| 5819 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5820 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5821 self.assertEqual("L", im.mode) | |
| 5822 self.assertEqual(20, im.size[0]) | |
| 5823 self.assertEqual(24, im.size[1]) | |
| 5824 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5825 self.assertEqual("L", im.mode) | |
| 5826 self.assertEqual(20, im.size[0]) | |
| 5827 self.assertEqual(24, im.size[1]) | |
| 5828 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5829 self.assertEqual("L", im.mode) | |
| 5830 self.assertEqual(10, im.size[0]) | |
| 5831 self.assertEqual(12, im.size[1]) | |
| 5832 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5833 self.assertEqual("L", im.mode) | |
| 5834 self.assertEqual(20, im.size[0]) | |
| 5835 self.assertEqual(24, im.size[1]) | |
|
268
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|
5836 |
|
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|
5837 |
|
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|
5838 def test_bitbucket_issue_154(self): |
|
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|
5839 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5840 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
268
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|
5841 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
|
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|
5842 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
|
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|
5843 |
|
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changeset
|
5844 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
|
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|
5845 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
|
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|
5846 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
|
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|
5847 |
|
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|
5848 # C-FIND is working on list of UIDs |
|
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|
5849 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
|
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5850 '-k', 'StudyInstanceUID=%s' % study, |
|
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5851 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
|
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5852 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
|
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5853 self.assertEqual(2, len(series)) |
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|
5854 self.assertTrue(series1 in series) |
|
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5855 self.assertTrue(series2 in series) |
|
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5856 |
|
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|
5857 # Individual retrieval is working in Orthanc < 1.6.0 |
|
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5858 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5859 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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|
5860 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
|
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|
5861 '-k', 'StudyInstanceUID=%s' % study, |
|
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|
5862 '-k', 'SeriesInstanceUID=%s' % series1, |
|
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|
5863 ]))) |
|
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|
5864 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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|
5865 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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|
5866 '-k', 'StudyInstanceUID=%s' % study, |
|
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|
5867 '-k', 'SeriesInstanceUID=%s' % series2, |
|
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|
5868 ]))) |
|
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|
5869 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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|
5870 |
|
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|
5871 DropOrthanc(_LOCAL) |
|
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|
5872 |
|
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|
5873 # But list matching is working only in Orthanc >= 1.6.0 |
|
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5874 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
5875 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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|
5876 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
|
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|
5877 '-k', 'StudyInstanceUID=%s' % study, |
|
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|
5878 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
|
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|
5879 ]))) |
|
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|
5880 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5881 |
|
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|
5882 |
|
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5883 def test_storage_commitment_api(self): |
|
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5884 # Storage commitment is available since Orthanc 1.6.0 |
|
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|
5885 |
|
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|
5886 def WaitTransaction(uid): |
|
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|
5887 while True: |
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|
5888 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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|
5889 if s['Status'] != 'Pending': |
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|
5890 return s |
|
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|
5891 else: |
|
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|
5892 time.sleep(0.01) |
|
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|
5893 |
| 281 | 5894 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5895 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5896 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5897 |
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|
5898 # Against self |
| 281 | 5899 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5900 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5901 }) ['ID'] | |
|
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|
5902 self.assertTrue(transaction.startswith('2.25.')) |
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|
5903 |
|
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|
5904 result = WaitTransaction(transaction) |
|
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|
5905 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5906 self.assertEqual('Success', result['Status']) |
|
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|
5907 self.assertEqual(1, len(result['Success'])) |
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|
5908 self.assertEqual(0, len(result['Failures'])) |
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|
5909 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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|
5910 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5911 |
| 281 | 5912 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5913 "DicomInstances" : [ | |
| 5914 { 'SOPClassUID' : sopClassUid, | |
| 5915 'SOPInstanceUID' : sopInstanceUid }, | |
| 5916 ], | |
| 5917 }) | |
| 5918 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5919 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5920 | |
| 5921 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5922 "Resources" : [ | |
| 5923 instance['ID'], | |
| 5924 instance['ParentSeries'], | |
| 5925 instance['ParentStudy'], | |
| 5926 instance['ParentPatient'], | |
| 5927 ] | |
| 5928 }) | |
|
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|
5929 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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|
5930 self.assertEqual(result, WaitTransaction(transaction)) |
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|
5931 |
|
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|
5932 |
| 281 | 5933 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5934 "DicomInstances" : [ | |
| 5935 [ 'nope', 'nope2' ], | |
| 5936 [ sopClassUid, sopInstanceUid ], | |
| 5937 ], | |
| 5938 }) ['ID'] | |
|
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|
5939 self.assertTrue(transaction.startswith('2.25.')) |
|
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|
5940 |
|
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|
5941 result = WaitTransaction(transaction) |
|
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|
5942 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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|
5943 self.assertEqual('Failure', result['Status']) |
|
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|
5944 self.assertEqual(1, len(result['Success'])) |
|
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|
5945 self.assertEqual(1, len(result['Failures'])) |
|
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|
5946 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
|
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|
5947 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5948 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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|
5949 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
|
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|
5950 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
|
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|
5951 |
|
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changeset
|
5952 # Cannot remove items from a failed storage commitment transaction |
|
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|
5953 self.assertRaises(Exception, lambda: |
|
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|
5954 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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|
5955 |
|
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|
5956 |
|
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|
5957 # Against Orthanc 0.8.6, that does not support storage commitment |
|
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|
5958 self.assertRaises(Exception, lambda: |
| 281 | 5959 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
| 5960 "DicomInstances" : [ | |
| 5961 [ sopClassUid, sopInstanceUid ], | |
| 5962 ] | |
| 5963 })) | |
|
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|
5964 |
|
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|
5965 |
|
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|
5966 |
|
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|
5967 def test_storage_commitment_store(self): |
|
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|
5968 # Storage commitment is available since Orthanc 1.6.0 |
|
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|
5969 |
|
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|
5970 def WaitTransaction(uid): |
|
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|
5971 while True: |
|
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|
5972 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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|
5973 if s['Status'] != 'Pending': |
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|
5974 return s |
|
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|
5975 else: |
|
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|
5976 time.sleep(0.01) |
|
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|
5977 |
|
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|
5978 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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|
5979 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
5980 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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diff
changeset
|
5981 |
|
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starting tests for storage commitment
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diff
changeset
|
5982 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
31e1e49df380
starting tests for storage commitment
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diff
changeset
|
5983 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
5984 'Resources' : [ i ], |
|
31e1e49df380
starting tests for storage commitment
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diff
changeset
|
5985 'StorageCommitment' : True, |
|
31e1e49df380
starting tests for storage commitment
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diff
changeset
|
5986 })) |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5987 |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
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269
diff
changeset
|
5988 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
5989 'Resources' : [ i ], |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5990 'StorageCommitment' : False, |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5991 }) |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
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269
diff
changeset
|
5992 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
31e1e49df380
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269
diff
changeset
|
5993 |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
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269
diff
changeset
|
5994 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5995 'Resources' : [ i ], |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5996 'StorageCommitment' : True, |
|
31e1e49df380
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269
diff
changeset
|
5997 }) |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5998 |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5999 transaction = j['StorageCommitmentTransactionUID'] |
|
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diff
changeset
|
6000 self.assertTrue(transaction.startswith('2.25.')) |
|
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6001 |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6002 result = WaitTransaction(transaction) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
6003 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
6004 self.assertEqual('Success', result['Status']) |
|
5daa3896981c
testing storage commitment reports
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279
diff
changeset
|
6005 self.assertEqual(1, len(result['Success'])) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6006 self.assertEqual(0, len(result['Failures'])) |
|
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testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6007 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6008 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6009 result['Success'][0]['SOPInstanceUID']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6010 |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6011 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6012 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6013 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6014 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6015 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6016 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6017 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6018 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6019 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6020 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6021 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6022 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6023 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6024 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6025 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6026 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6027 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6028 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6029 answer['SOPClassUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6030 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6031 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6032 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6033 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6034 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6035 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6036 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6037 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
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parents:
285
diff
changeset
|
6038 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6039 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6040 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6041 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6042 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6043 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6044 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6045 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6046 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6047 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6048 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6049 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6050 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6051 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6052 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6053 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6054 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6055 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6056 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6057 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6058 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6059 # Export, with transcoding disabled => this fails |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6060 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6061 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6062 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
6063 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6064 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6065 |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6066 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6067 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6068 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6069 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6070 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6071 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6072 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6073 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6074 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6075 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6076 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6077 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6078 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6079 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6080 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6081 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6082 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6083 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6084 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6085 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6086 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6087 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6088 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6089 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6090 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6091 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
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289
diff
changeset
|
6092 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6093 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6094 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6095 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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290
diff
changeset
|
6096 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6097 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6098 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6099 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6100 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
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HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6101 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6102 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6103 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
6104 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6105 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
6106 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6107 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6108 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6109 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6110 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6111 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6112 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6113 |
| 304 | 6114 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6115 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6116 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6117 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6118 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6119 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6120 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6121 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6122 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6123 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6124 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6125 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6126 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6127 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6128 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6129 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6130 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6131 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6132 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6133 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6134 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6135 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6136 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6137 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6138 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6139 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6140 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6141 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6142 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6143 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6144 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6145 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6146 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6147 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6148 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6149 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6150 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6151 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6152 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6153 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6154 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6155 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6156 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6157 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6158 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6159 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6160 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6161 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6162 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6163 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6164 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6165 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6166 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6167 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6168 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6169 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6170 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6171 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6172 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6173 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6174 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6175 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6176 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6177 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6178 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6179 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6180 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6181 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6182 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6183 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6184 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6185 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6186 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6187 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6188 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6189 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6190 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6191 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6192 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6193 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6194 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6195 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6196 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6197 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6198 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6199 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6200 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6201 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6202 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6203 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6204 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6205 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6206 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6207 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6208 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6209 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6210 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6211 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6212 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6213 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6214 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6215 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6216 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6217 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6218 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6219 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6220 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6221 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6222 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6223 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6224 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6225 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6226 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6227 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6228 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6229 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6230 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6231 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6232 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6233 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6234 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6235 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6236 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6237 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6238 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6239 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6240 |
| 308 | 6241 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6242 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6243 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6244 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6245 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6246 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6247 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6248 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6249 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6250 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6251 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6252 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6253 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6254 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6255 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6256 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6257 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6258 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6259 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6260 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6261 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6262 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6263 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6264 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6265 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6266 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6267 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6268 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6269 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6270 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6271 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6272 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6273 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6274 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6275 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6276 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6277 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6278 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6279 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6280 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6281 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6282 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6283 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6284 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6285 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6286 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6287 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6288 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6289 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6290 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6291 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6292 |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6293 def test_modify_need_force_to_change_uids(self): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6294 def Modify(level, resourceId, replaceTags, force, keepSource): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6295 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6296 'Replace' : replaceTags, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6297 'Force': force, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6298 'KeepSource' : keepSource |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6299 }) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6300 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6301 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6302 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6303 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6304 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6305 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6306 # can not change the StudyInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6307 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6308 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6309 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6310 # can not change the SeriesInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6311 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6312 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6313 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6314 # can not change the SOPInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6315 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6316 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6317 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6318 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6319 # can not change the PatientID of a study unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6320 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6321 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6322 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6323 |
| 500 | 6324 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6325 # this was forbidden even with Force=true till 1.11.2 included |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6326 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6327 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6328 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6329 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6330 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6331 def test_modify_study_module_reconstruction(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6332 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6333 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6334 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6335 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6336 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6337 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6338 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6339 UploadFolder(_REMOTE, 'Knee/T2') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6340 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6341 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6342 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6343 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6344 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6345 'Replace' : replaceTags, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6346 'Force': force, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6347 'KeepSource' : keepSource |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6348 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6349 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6350 return (modifyResponse, modifiedResource) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6351 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6352 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6353 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6354 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6355 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6356 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6357 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6358 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6359 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6360 ####### study level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6361 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6362 # modify study description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6363 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6364 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6365 'StudyDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6366 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6367 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6368 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6369 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6370 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6371 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6372 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6373 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6374 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6375 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6376 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6377 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6378 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6379 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6380 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6381 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6382 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6383 'PatientID': 'TOTO_ID', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6384 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6385 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6386 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6387 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6388 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6389 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6390 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6391 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6392 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6393 ####### series level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6394 # modify series description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6395 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6396 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6397 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6398 'SeriesDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6399 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6400 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6401 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6402 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6403 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6404 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6405 def test_rename_patient_with_multiple_studies(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6406 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6407 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6408 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6409 patientDicomId = 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6410 patientName = 'Test' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6411 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6412 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6413 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6414 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6415 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6416 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6417 # each sub-test is in a dedicated 'if' for clarity |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6418 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6419 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6420 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6421 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6422 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6423 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6424 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6425 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6426 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6427 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6428 # rename the patient (at patient level) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6429 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6430 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6431 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6432 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6433 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6434 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6435 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6436 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6437 # make sure the patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6438 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6439 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6440 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6441 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6442 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6443 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6444 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6445 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6446 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6447 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6448 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6449 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6450 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6451 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6452 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6453 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6454 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6455 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6456 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6457 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6458 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6459 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6460 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6461 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6462 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6463 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6464 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6465 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6466 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6467 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6468 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6469 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6470 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6471 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6472 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6473 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6474 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6475 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6476 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6477 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6478 # would have the same orthanc ids as the source ids -> they would be deleted |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6479 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6480 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6481 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6482 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6483 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6484 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6485 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6486 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6487 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6488 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6489 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6490 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6491 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6492 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6493 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6494 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6495 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6496 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6497 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6498 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6499 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6500 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6501 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6502 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6503 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6504 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6505 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6506 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6507 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6508 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6509 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6510 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6511 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6512 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6513 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6514 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6515 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6516 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6517 # try to attach the knee study to an existing patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6518 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6519 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6520 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6521 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6522 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6523 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6524 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6525 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6526 # this should fail if only specifying the PatientID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6527 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6528 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6529 'PatientID': 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6530 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6531 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6532 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6533 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6534 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6535 # this should fail if specifying all tags but one of them is not correct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6536 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6537 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6538 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6539 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6540 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6541 'PatientSex': 'F' # this is wrong ! |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6542 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6543 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6544 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6545 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6546 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6547 # this should fail if specifying a tag that is not defined in DB for that patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6548 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6549 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6550 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6551 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6552 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6553 'PatientSex': 'M', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6554 '0010,1000': 'TUTU' # this does not exist in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6555 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6556 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6557 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6558 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6559 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6560 # this should now work with all correct tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6561 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6562 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6563 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6564 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6565 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6566 'PatientSex': 'M' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6567 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6568 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6569 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6570 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6571 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6572 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6573 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6574 # make sure tha patient name remains the same at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6575 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6576 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6577 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6578 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6579 # try to edit patient in Knee (only study from this patient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6580 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6581 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6582 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6583 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6584 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6585 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6586 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6587 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6588 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6589 # try to change the PatientName and StudyDescription at study level. |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6590 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6591 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6592 'PatientName': 'Test Knee', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6593 'StudyDescription': 'Knee study' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6594 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6595 'Keep': ['StudyInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6596 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6597 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6598 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6599 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6600 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6601 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6602 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6603 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6604 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6605 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6606 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6607 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6608 'PatientName': 'Test Knee 2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6609 'PatientID': 'TEST_KNEE_2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6610 'StudyDescription': 'Knee study 2' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6611 }, |
|
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6612 'Force': True, |
|
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|
6613 'KeepSource' : False |
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|
6614 }) |
|
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|
6615 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
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|
6616 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
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|
6617 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
|
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|
6618 # reload the patient, now, its orthanc id has changed |
|
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|
6619 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
|
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|
6620 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
|
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|
6621 # the previous patient shall not exist anymore |
|
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|
6622 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
|
498
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6623 |
|
305
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6624 def test_store_peer_transcoding(self): |
|
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6625 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
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6626 |
|
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6627 SYNTAXES = [ |
|
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6628 '1.2.840.10008.1.2', |
|
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6629 '1.2.840.10008.1.2.1', |
|
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6630 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
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6631 '1.2.840.10008.1.2.2', |
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6632 '1.2.840.10008.1.2.4.50', |
|
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|
6633 '1.2.840.10008.1.2.4.51', |
|
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6634 '1.2.840.10008.1.2.4.57', |
|
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|
6635 '1.2.840.10008.1.2.4.70', |
|
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|
6636 ] |
|
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|
6637 |
|
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|
6638 if HasGdcmPlugin(_REMOTE): |
|
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6639 SYNTAXES = SYNTAXES + [ |
|
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|
6640 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
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|
6641 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
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|
6642 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
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|
6643 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
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|
6644 ] |
|
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|
6645 |
|
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|
6646 for syntax in SYNTAXES: |
|
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|
6647 body = { |
|
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|
6648 'Resources' : [ i ], |
|
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|
6649 } |
|
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|
6650 |
|
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|
6651 if syntax != '1.2.840.10008.1.2.1': |
|
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|
6652 body['Transcode'] = syntax |
|
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|
6653 |
|
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|
6654 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6655 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
6656 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
|
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|
6657 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6658 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
6659 self.assertEqual(syntax, GetTransferSyntax( |
|
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|
6660 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
|
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|
6661 |
|
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diff
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|
6662 DropOrthanc(_LOCAL) |
| 308 | 6663 |
| 6664 | |
| 295 | 6665 def test_getscu(self): |
| 307 | 6666 def CleanTarget(): |
| 6667 if os.path.isdir('/tmp/GETSCU'): | |
| 6668 shutil.rmtree('/tmp/GETSCU') | |
| 6669 os.makedirs('/tmp/GETSCU') | |
| 6670 | |
|
306
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diff
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|
6671 env = {} |
|
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|
6672 if _DOCKER: |
|
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|
6673 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
|
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|
6674 # and running in a GNU/Linux distribution running DCMTK |
|
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|
6675 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
|
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|
6676 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
|
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diff
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|
6677 |
| 295 | 6678 # no transcoding required |
| 307 | 6679 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6680 | |
| 6681 CleanTarget() | |
| 295 | 6682 |
|
306
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|
6683 subprocess.check_call([ |
|
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|
6684 FindExecutable('getscu'), |
|
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diff
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|
6685 _REMOTE['Server'], |
|
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|
6686 str(_REMOTE['DicomPort']), |
|
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diff
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|
6687 '-aec', 'ORTHANC', |
|
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diff
changeset
|
6688 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6689 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
306
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|
6690 '-k', '0008,0052=STUDY', |
|
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|
6691 '--output-directory', '/tmp/GETSCU/' |
|
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|
6692 ], env = env) |
| 295 | 6693 |
| 311 | 6694 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6695 self.assertTrue(os.path.isfile(f1)) | |
| 6696 with open(f1, 'rb') as f: | |
| 6697 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6698 | |
| 307 | 6699 CleanTarget() |
| 295 | 6700 |
| 6701 # transcoding required | |
| 311 | 6702 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6703 |
| 6704 subprocess.check_call([ | |
| 6705 FindExecutable('getscu'), | |
| 6706 _REMOTE['Server'], | |
| 6707 str(_REMOTE['DicomPort']), | |
| 6708 '-aec', 'ORTHANC', | |
| 6709 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6710 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6711 '-k', '0008,0052=STUDY', |
| 6712 '--output-directory', '/tmp/GETSCU/' | |
| 6713 ], env = env) | |
| 6714 | |
| 311 | 6715 self.assertTrue(os.path.isfile(f1)) |
| 6716 with open(f1, 'rb') as f: | |
| 6717 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6718 | |
| 6719 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6720 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6721 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6722 self.assertTrue(os.path.isfile(f2)) | |
| 6723 with open(f2, 'rb') as f: | |
| 6724 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
324
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|
6725 |
|
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|
6726 |
|
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|
6727 def test_findscu_truncation(self): |
|
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|
6728 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
|
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|
6729 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
|
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|
6730 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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|
6731 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
6732 |
|
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|
6733 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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|
6734 |
|
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|
6735 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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|
6736 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6737 self.assertEqual(2, len(result)) |
|
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|
6738 |
|
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|
6739 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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6740 # study, leading to a string of 249 characters |
|
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|
6741 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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|
6742 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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|
6743 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6744 self.assertEqual(1, len(result)) |
|
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|
6745 |
|
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|
6746 # The "StudyInstanceUID" is set as a list of 6 times the same |
|
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6747 # study, leading to a string of 299 characters. In Orthanc <= |
|
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changeset
|
6748 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
|
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|
6749 # == 256, and is thus wiped out by C-FIND SCP. As a |
|
6164d39399ad
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diff
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|
6750 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
6164d39399ad
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diff
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|
6751 # "StudyInstanceUID" and returns all the available |
|
6164d39399ad
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diff
changeset
|
6752 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
6164d39399ad
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diff
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|
6753 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
6164d39399ad
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diff
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|
6754 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
|
6164d39399ad
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diff
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|
6755 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
6164d39399ad
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diff
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|
6756 self.assertEqual(1, len(result)) |
|
328
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diff
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|
6757 |
|
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diff
changeset
|
6758 |
|
8a462f9c5a97
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diff
changeset
|
6759 def test_store_compressed(self): |
|
8a462f9c5a97
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diff
changeset
|
6760 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
8a462f9c5a97
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diff
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|
6761 dicom = f.read() |
|
8a462f9c5a97
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diff
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|
6762 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
|
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diff
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|
6763 sourceSize = len(dicom) |
|
324
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|
6764 |
|
328
8a462f9c5a97
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diff
changeset
|
6765 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
8a462f9c5a97
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diff
changeset
|
6766 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
6767 |
|
8a462f9c5a97
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diff
changeset
|
6768 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
8a462f9c5a97
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diff
changeset
|
6769 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
8a462f9c5a97
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diff
changeset
|
6770 _REMOTE, '/peers/peer/store', { |
|
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diff
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|
6771 'Resources' : [ i ], |
|
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diff
changeset
|
6772 'Synchronous' : False, |
|
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diff
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|
6773 })) |
|
8a462f9c5a97
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diff
changeset
|
6774 |
|
8a462f9c5a97
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diff
changeset
|
6775 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
8a462f9c5a97
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diff
changeset
|
6776 self.assertFalse(job['Content']['Compress']) |
|
8a462f9c5a97
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diff
changeset
|
6777 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
8a462f9c5a97
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diff
changeset
|
6778 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
8a462f9c5a97
test_store_compressed
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parents:
327
diff
changeset
|
6779 |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6780 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
8a462f9c5a97
test_store_compressed
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parents:
327
diff
changeset
|
6781 DropOrthanc(_LOCAL) |
|
8a462f9c5a97
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6782 |
|
8a462f9c5a97
test_store_compressed
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parents:
327
diff
changeset
|
6783 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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diff
changeset
|
6784 # Not supported by Orthanc 0.8.6 => failure |
|
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test_store_compressed
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diff
changeset
|
6785 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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327
diff
changeset
|
6786 'Resources' : [ i ], |
|
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test_store_compressed
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diff
changeset
|
6787 'Compress' : True, |
|
8a462f9c5a97
test_store_compressed
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diff
changeset
|
6788 })) |
|
8a462f9c5a97
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diff
changeset
|
6789 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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test_store_compressed
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parents:
327
diff
changeset
|
6790 |
|
8a462f9c5a97
test_store_compressed
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parents:
327
diff
changeset
|
6791 # Sending to the tested remote server, with compression: OK |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6792 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
8a462f9c5a97
test_store_compressed
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parents:
327
diff
changeset
|
6793 _REMOTE, '/peers/self/store', { |
|
8a462f9c5a97
test_store_compressed
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327
diff
changeset
|
6794 'Resources' : [ i ], |
|
8a462f9c5a97
test_store_compressed
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327
diff
changeset
|
6795 'Compress' : True, |
|
8a462f9c5a97
test_store_compressed
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327
diff
changeset
|
6796 'Synchronous' : False, |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6797 })) |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6798 |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6799 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
8a462f9c5a97
test_store_compressed
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diff
changeset
|
6800 self.assertTrue(job['Content']['Compress']) |
|
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test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6801 |
|
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6802 # Compression must have divided the size of the sent data at least twice |
|
8a462f9c5a97
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6803 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6804 |
| 6805 | |
| 6806 def test_move_ambra(self): | |
| 6807 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6808 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6809 | |
| 6810 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6811 | |
| 6812 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6813 '--study', | |
| 6814 '-k', 'StudyInstanceUID=' | |
| 6815 ]))) | |
| 6816 | |
| 6817 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6818 '--study', | |
| 6819 '-k', 'AccessionNumber=', | |
| 6820 ]))) | |
| 6821 | |
| 6822 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6823 '--study', | |
| 6824 '-k', 'AccessionNumber=', | |
| 6825 '-k', 'StudyInstanceUID=' | |
| 6826 ]))) | |
| 6827 | |
| 6828 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6829 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6830 '--study', | |
| 6831 '-k', 'AccessionNumber=CT16000988', | |
| 6832 '-k', 'StudyInstanceUID=', | |
| 6833 ]))) | |
| 6834 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6835 DropOrthanc(_LOCAL) | |
| 6836 | |
| 6837 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6838 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6839 '--study', | |
| 6840 '-k', 'AccessionNumber=CT16000988', | |
| 6841 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6842 ]))) | |
| 6843 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6844 DropOrthanc(_LOCAL) | |
| 6845 | |
| 6846 # This fails on Orthanc <= 1.7.3 | |
| 6847 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6848 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6849 '--study', | |
| 6850 '-k', 'AccessionNumber=', | |
| 6851 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6852 ]))) | |
| 6853 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6854 DropOrthanc(_LOCAL) | |
|
333
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parents:
332
diff
changeset
|
6855 |
|
695be643b0f4
test_decode_elscint
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parents:
332
diff
changeset
|
6856 |
|
695be643b0f4
test_decode_elscint
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parents:
332
diff
changeset
|
6857 def test_decode_elscint(self): |
|
695be643b0f4
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diff
changeset
|
6858 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
695be643b0f4
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diff
changeset
|
6859 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
695be643b0f4
test_decode_elscint
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parents:
332
diff
changeset
|
6860 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6861 |
|
695be643b0f4
test_decode_elscint
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parents:
332
diff
changeset
|
6862 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
695be643b0f4
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diff
changeset
|
6863 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
6864 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
6865 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
6866 |
|
695be643b0f4
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332
diff
changeset
|
6867 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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diff
changeset
|
6868 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
6869 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
6870 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
6871 |
|
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332
diff
changeset
|
6872 # The two tests below fail on Orthanc <= 1.7.3 |
|
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diff
changeset
|
6873 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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diff
changeset
|
6874 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6875 |
|
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diff
changeset
|
6876 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
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diff
changeset
|
6877 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6878 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6879 |
|
971ff285302b
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diff
changeset
|
6880 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
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diff
changeset
|
6881 # Problem reported by Alain Mazy on 2020-09-15 |
|
971ff285302b
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diff
changeset
|
6882 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
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diff
changeset
|
6883 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
971ff285302b
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diff
changeset
|
6884 |
|
335
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diff
changeset
|
6885 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
96718de2f29c
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diff
changeset
|
6886 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
96718de2f29c
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diff
changeset
|
6887 self.assertEqual(1, len(modalitiesInStudy)) |
|
96718de2f29c
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diff
changeset
|
6888 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
96718de2f29c
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diff
changeset
|
6889 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
6890 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
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diff
changeset
|
6891 # The empty string '' corresponds to universal matching. |
|
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|
6892 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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|
6893 |
|
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diff
changeset
|
6894 if i in [ 'UX', 'UX\\MR' ]: |
|
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changeset
|
6895 expected = 0 |
|
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|
6896 else: |
|
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changeset
|
6897 expected = 1 |
|
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changeset
|
6898 |
|
334
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test_rest_modalities_in_study_2
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diff
changeset
|
6899 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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test_rest_modalities_in_study_2
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diff
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|
6900 'Query' : { 'ModalitiesInStudy' : i }}) |
|
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changeset
|
6901 self.assertEqual(expected, len(a)) |
|
334
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test_rest_modalities_in_study_2
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diff
changeset
|
6902 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6903 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6904 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
335
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changeset
|
6905 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
ec13ace43bde
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diff
changeset
|
6906 |
|
ec13ace43bde
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diff
changeset
|
6907 |
|
ec13ace43bde
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diff
changeset
|
6908 def test_webdav(self): |
|
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changeset
|
6909 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
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diff
changeset
|
6910 |
|
342
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diff
changeset
|
6911 for suffix in [ '', '/' ]: |
|
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diff
changeset
|
6912 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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diff
changeset
|
6913 self.assertEqual(1, len(f)) |
|
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changeset
|
6914 self.assertTrue('/webdav/' in f.keys()) |
|
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changeset
|
6915 self.assertTrue(f['/webdav/']['folder']) |
|
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changeset
|
6916 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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changeset
|
6917 |
|
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diff
changeset
|
6918 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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changeset
|
6919 self.assertEqual(6, len(f)) |
|
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changeset
|
6920 self.assertTrue(f['/webdav/']['folder']) |
|
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changeset
|
6921 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6922 |
|
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diff
changeset
|
6923 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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changeset
|
6924 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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changeset
|
6925 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
6926 |
|
bf8369ea3ff1
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diff
changeset
|
6927 for depth in [ 0, 1 ]: |
|
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diff
changeset
|
6928 for suffix2 in [ '', '/' ]: |
|
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diff
changeset
|
6929 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
changeset
|
6930 |
|
bf8369ea3ff1
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diff
changeset
|
6931 if i == 'uploads': |
|
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diff
changeset
|
6932 # Empty folders might still exist in "/uploads/" |
|
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changeset
|
6933 self.assertTrue('/webdav/uploads/' in g) |
|
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diff
changeset
|
6934 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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diff
changeset
|
6935 for j in g.items(): |
|
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changeset
|
6936 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
changeset
|
6937 else: |
|
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diff
changeset
|
6938 self.assertEqual(1, len(g)) |
|
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diff
changeset
|
6939 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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diff
changeset
|
6940 self.assertTrue(g.items()[0][1]['folder']) |
|
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more tests of webdav
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341
diff
changeset
|
6941 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6942 |
|
342
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diff
changeset
|
6943 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
6944 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
6945 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
6946 |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6947 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
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diff
changeset
|
6948 time.sleep(0.01) |
|
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diff
changeset
|
6949 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
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trying webdav tests
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335
diff
changeset
|
6950 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6951 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6952 def test_log_categories(self): |
| 350 | 6953 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
6954 |
| 350 | 6955 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6956 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
6957 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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diff
changeset
|
6958 |
| 350 | 6959 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6960 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
6961 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6962 |
| 350 | 6963 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6964 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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348
diff
changeset
|
6965 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6966 |
| 350 | 6967 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
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348
diff
changeset
|
6968 |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6969 # Switch back to the original log level |
| 350 | 6970 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6971 | |
| 6972 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
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348
diff
changeset
|
6973 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6974 |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6975 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6976 |
| 6977 | |
| 6978 def test_upload_zip(self): | |
| 6979 f = StringIO() | |
| 6980 with zipfile.ZipFile(f, 'w') as z: | |
| 6981 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6982 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6983 c = g.read() | |
| 6984 z.writestr('hello/world/dicom1.dcm', c) | |
| 6985 z.writestr('hello/world/dicom2.dcm', c) | |
| 6986 | |
| 6987 f.seek(0) | |
| 6988 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6989 | |
| 6990 self.assertEqual(2, len(i)) | |
| 6991 self.assertEqual(i[0], i[1]) | |
| 6992 self.assertEqual(6, len(i[0])) | |
| 6993 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 6994 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 6995 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 6996 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 6997 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 6998 | |
| 6999 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 7000 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7001 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7002 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7003 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
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359
diff
changeset
|
7004 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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diff
changeset
|
7005 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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diff
changeset
|
7006 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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diff
changeset
|
7007 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7008 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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diff
changeset
|
7009 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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diff
changeset
|
7010 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7011 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7012 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7013 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7014 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7015 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7016 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7017 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7018 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7019 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7020 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7021 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7022 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7023 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7024 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7025 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7026 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7027 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7028 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7029 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7030 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7031 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7032 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7033 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7034 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7035 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7036 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7037 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7038 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7039 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7040 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7041 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7042 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7043 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7044 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7045 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7046 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7047 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7048 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7049 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7050 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7051 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7052 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7053 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7054 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7055 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7056 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7057 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7058 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7059 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7060 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7061 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7062 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7063 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7064 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7065 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7066 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7067 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7068 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7069 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7070 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7071 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7072 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7073 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7074 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7075 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7076 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7077 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7078 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7079 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7080 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7081 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7082 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7083 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7084 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7085 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7086 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7087 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7088 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7089 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7090 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7091 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7092 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7093 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7094 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7095 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7096 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7097 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7098 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7099 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7100 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7101 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7102 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7103 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7104 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7105 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7106 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7107 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7108 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7109 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7110 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7111 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7112 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7113 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7114 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
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diff
changeset
|
7115 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
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diff
changeset
|
7116 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
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diff
changeset
|
7117 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
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test_pixel_data_offset
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diff
changeset
|
7118 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
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diff
changeset
|
7119 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
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diff
changeset
|
7120 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
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parents:
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diff
changeset
|
7121 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
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diff
changeset
|
7122 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
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added test_peer_store_straight
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diff
changeset
|
7123 |
|
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added test_peer_store_straight
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diff
changeset
|
7124 |
|
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added test_peer_store_straight
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diff
changeset
|
7125 def test_peer_store_straight(self): |
|
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changeset
|
7126 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
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added test_peer_store_straight
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diff
changeset
|
7127 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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added test_peer_store_straight
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parents:
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diff
changeset
|
7128 |
|
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added test_peer_store_straight
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diff
changeset
|
7129 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
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added test_peer_store_straight
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diff
changeset
|
7130 self.assertEqual(3, len(peer)) |
|
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added test_peer_store_straight
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diff
changeset
|
7131 self.assertEqual(5, peer['DatabaseVersion']) |
|
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added test_peer_store_straight
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diff
changeset
|
7132 self.assertEqual('MyOrthanc', peer['Name']) |
|
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added test_peer_store_straight
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changeset
|
7133 self.assertEqual('0.8.6', peer['Version']) |
|
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added test_peer_store_straight
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diff
changeset
|
7134 |
|
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added test_peer_store_straight
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diff
changeset
|
7135 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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added test_peer_store_straight
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diff
changeset
|
7136 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
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parents:
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diff
changeset
|
7137 |
|
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added test_peer_store_straight
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diff
changeset
|
7138 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
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added test_peer_store_straight
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diff
changeset
|
7139 # "ParentStudy", "ParentSeries" are not reported |
|
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added test_peer_store_straight
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diff
changeset
|
7140 self.assertEqual(3, len(j)) |
|
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added test_peer_store_straight
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diff
changeset
|
7141 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
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added test_peer_store_straight
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diff
changeset
|
7142 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
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added test_peer_store_straight
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diff
changeset
|
7143 self.assertEqual('Success', j['Status']) |
|
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added test_peer_store_straight
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parents:
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diff
changeset
|
7144 |
|
a8dd562943a7
added test_peer_store_straight
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parents:
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diff
changeset
|
7145 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
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diff
changeset
|
7146 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 7147 |
| 7148 | |
| 7149 def test_cp246(self): | |
| 7150 # This fails on Orthanc <= 1.9.0 | |
| 7151 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 7152 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 7153 | |
| 7154 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 7155 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 7156 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 7157 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 7158 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 7159 | |
| 7160 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 7161 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 7162 | |
| 7163 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 7164 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 7165 | |
| 7166 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 7167 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 7168 | |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7169 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
7170 def test_revisions_metadata(self): |
|
391
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diff
changeset
|
7171 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
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diff
changeset
|
7172 # was introduced in 1.9.2), or if configuration option |
|
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testing revisions in metadata
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parents:
390
diff
changeset
|
7173 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
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testing revisions in metadata
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parents:
390
diff
changeset
|
7174 # related to revisions mimic CouchDB: |
|
227d9a932467
testing revisions in metadata
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diff
changeset
|
7175 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
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testing revisions in metadata
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parents:
390
diff
changeset
|
7176 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
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testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
7177 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7178 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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testing revisions in metadata
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parents:
390
diff
changeset
|
7179 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
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parents:
394
diff
changeset
|
7180 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
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390
diff
changeset
|
7181 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7182 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7183 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7184 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7185 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7186 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7187 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7188 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7189 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7190 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7191 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7192 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7193 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7194 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7195 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7196 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7197 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7198 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7199 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7200 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7201 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7202 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7203 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7204 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7205 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7206 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7207 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7208 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7209 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7210 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7211 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7212 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7213 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7214 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7215 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
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diff
changeset
|
7216 |
|
227d9a932467
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390
diff
changeset
|
7217 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
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diff
changeset
|
7218 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7219 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7220 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
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diff
changeset
|
7221 self.assertEqual('200', headers['status']) |
|
397
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diff
changeset
|
7222 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7223 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7224 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7225 self.assertEqual('200', headers['status']) |
|
397
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diff
changeset
|
7226 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7227 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7228 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7229 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7230 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7231 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7232 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7233 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7234 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7235 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7236 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7237 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7238 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7239 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7240 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7241 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7242 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7243 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7244 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7245 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7246 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7247 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7248 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7249 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7250 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7251 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7252 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7253 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7254 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7255 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7256 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7257 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7258 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7259 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7260 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7261 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7262 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7263 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7264 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7265 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7266 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7267 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7268 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7269 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7270 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7271 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7272 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7273 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7274 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7275 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7276 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7277 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7278 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7279 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7280 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7281 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7282 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7283 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7284 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7285 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7286 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7287 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7288 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7289 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7290 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7291 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7292 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7293 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7294 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7295 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7296 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7297 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7298 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7299 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7300 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7301 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7302 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7303 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7304 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7305 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7306 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7307 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7308 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7309 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7310 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7311 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7312 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7313 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7314 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7315 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7316 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7317 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7318 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7319 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7320 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7321 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7322 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7323 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7324 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7325 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7326 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7327 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7328 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7329 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7330 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7331 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7332 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7333 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7334 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7335 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7336 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7337 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7338 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7339 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7340 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7341 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7342 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7343 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7344 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7345 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7346 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7347 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7348 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7349 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7350 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7351 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7352 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7353 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7354 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7355 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7356 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7357 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7358 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7359 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7360 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7361 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7362 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7363 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7364 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7365 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7366 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7367 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7368 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7369 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7370 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7371 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7372 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7373 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7374 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7375 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7376 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7377 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7378 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7379 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7380 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7381 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7382 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7383 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7384 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7385 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7386 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7387 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7388 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7389 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7390 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7391 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7392 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7393 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7394 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7395 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7396 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7397 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7398 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7399 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7400 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7401 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7402 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7403 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7404 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7405 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7406 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7407 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7408 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7409 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7410 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7411 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7412 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7413 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7414 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7415 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7416 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7417 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7418 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7419 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7420 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7421 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7422 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7423 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7424 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7425 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7426 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7427 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7428 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7429 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7430 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7431 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7432 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7433 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7434 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7435 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7436 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7437 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7438 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7439 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7440 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7441 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7442 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7443 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7444 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7445 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7446 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7447 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7448 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7449 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7450 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7451 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7452 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7453 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7454 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7455 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7456 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7457 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7458 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7459 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7460 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7461 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7462 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7463 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7464 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7465 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7466 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7467 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7468 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7469 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7470 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7471 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7472 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7473 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7474 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7475 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7476 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7477 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7478 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7479 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7480 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7481 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7482 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7483 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7484 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7485 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7486 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7487 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7488 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7489 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7490 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7491 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7492 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7493 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7494 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7495 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7496 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7497 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7498 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7499 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7500 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7501 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7502 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7503 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7504 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7505 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7506 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7507 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7508 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7509 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7510 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7511 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7512 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7513 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7514 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7515 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7516 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7517 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7518 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7519 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7520 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7521 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7522 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7523 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7524 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7525 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7526 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7527 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7528 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7529 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7530 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7531 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7532 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7533 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7534 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7535 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7536 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7537 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7538 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7539 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7540 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7541 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7542 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7543 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7544 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7545 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7546 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7547 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7548 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7549 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7550 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7551 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7552 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7553 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7554 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7555 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7556 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7557 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7558 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7559 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7560 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7561 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7562 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7563 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7564 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7565 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7566 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7567 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7568 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7569 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7570 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7571 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7572 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7573 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7574 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7575 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7576 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7577 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7578 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7579 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7580 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7581 |
| 7582 | |
| 7583 def test_issue_146(self): | |
| 7584 # "Update Anonyization to 2019c" | |
| 7585 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7586 | |
| 7587 def GetTags(study, params): | |
| 7588 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7589 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7590 self.assertEqual(1, len(b)) | |
| 7591 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7592 | |
| 7593 | |
| 7594 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7595 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7596 | |
| 7597 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7598 | |
| 7599 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7600 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7601 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7602 tagsDefault = GetTags(study, {}) | |
| 7603 | |
| 420 | 7604 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7605 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7606 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7607 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7608 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7609 | |
| 7610 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7611 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7612 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7613 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7614 self.assertEqual('YES', t['0012,0062']) | |
| 7615 | |
| 7616 for t in [ tags2008 ]: | |
| 7617 self.assertEqual('20200101', t['0008,0020']) | |
| 7618 | |
| 7619 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7620 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7621 | |
| 7622 for t in [ tags2008, tags2017c ]: | |
| 7623 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7624 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7625 | |
| 7626 for t in [ tags2021b, tagsDefault ]: | |
| 7627 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7628 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7629 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7630 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7631 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7632 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7633 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7634 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7635 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7636 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7637 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7638 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7639 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7640 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7641 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7642 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7643 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7644 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7645 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7646 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7647 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7648 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7649 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7650 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7651 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7652 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7653 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7654 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7655 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7656 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7657 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7658 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7659 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7660 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7661 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7662 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7663 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7664 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7665 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7666 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7667 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7668 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7669 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7670 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7671 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7672 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7673 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7674 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7675 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7676 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7677 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7678 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7679 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7680 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7681 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7682 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7683 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7684 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7685 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7686 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7687 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7688 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7689 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7690 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7691 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7692 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7693 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7694 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7695 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7696 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7697 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7698 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7699 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7700 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7701 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7702 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7703 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7704 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7705 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7706 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7707 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7708 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7709 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7710 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7711 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7712 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7713 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7714 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7715 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7716 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7717 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7718 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7719 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7720 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7721 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7722 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7723 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7724 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7725 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7726 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7727 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7728 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7729 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7730 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7731 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7732 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7733 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7734 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7735 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7736 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7737 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7738 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7739 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7740 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7741 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7742 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7743 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7744 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7745 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7746 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7747 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7748 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7749 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7750 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7751 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7752 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7753 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7754 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7755 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7756 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7757 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7758 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7759 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7760 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7761 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7762 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7763 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7764 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7765 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7766 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7767 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7768 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7769 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7770 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7771 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7772 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7773 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7774 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7775 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7776 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7777 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7778 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7779 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7780 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7781 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7782 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7783 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7784 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7785 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7786 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7787 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7788 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7789 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7790 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7791 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7792 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7793 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7794 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7795 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7796 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7797 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7798 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7799 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7800 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7801 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7802 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7803 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7804 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7805 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7806 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7807 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7808 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7809 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7810 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7811 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7812 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7813 |
| 7814 | |
| 7815 def test_bulk_modify(self): | |
| 7816 # New in Orthanc 1.9.4 | |
| 7817 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7818 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7819 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7820 if expectedCount != None: |
| 7821 self.assertEqual(expectedCount, len(m)) | |
| 7822 return m | |
| 7823 | |
| 7824 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7825 series = DoGet(_REMOTE, '/series') [0] | |
| 7826 study = DoGet(_REMOTE, '/studies') [0] | |
| 7827 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7828 | |
| 7829 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7830 'Resources' : [ instance ] | |
| 7831 }) | |
| 7832 | |
| 7833 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7834 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7835 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7836 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7837 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7838 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7839 'Resources' : [ instance ] |
| 7840 }) | |
| 7841 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7842 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7843 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7844 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7845 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7846 |
| 7847 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7848 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7849 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7850 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7851 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7852 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7853 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7854 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7855 |
| 410 | 7856 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7857 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7858 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7859 | |
| 7860 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7861 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7862 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7863 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7864 | |
| 7865 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7866 'Resources' : [ knee1, brainix ] | |
| 7867 }) | |
| 7868 | |
| 7869 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7870 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7871 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7872 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7873 | |
| 7874 for i in GetModified(a, 'Instance', 2): | |
| 7875 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7876 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7877 | |
| 7878 b = GetModified(a, 'Series', 2) | |
| 7879 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7880 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7881 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7882 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7883 | |
| 7884 b = GetModified(a, 'Study', 2) | |
| 7885 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7886 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7887 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7888 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7889 | |
| 7890 b = GetModified(a, 'Patient', 2) | |
| 7891 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7892 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7893 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7894 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7895 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7896 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7897 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7898 }) |
| 410 | 7899 |
| 7900 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7901 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7902 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7903 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7904 self.assertEqual(4, len(sourceInstances)) | |
| 7905 self.assertEqual(4, len(sourceSeries)) | |
| 7906 self.assertEqual(3, len(sourceStudies)) | |
| 7907 self.assertEqual(3, len(sourcePatients)) | |
| 7908 | |
| 7909 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7910 'Resources' : [ knee1, brainix ] | |
| 7911 }) | |
| 7912 | |
| 7913 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7914 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7915 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7916 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7917 | |
| 7918 for i in GetModified(a, 'Instance', 2): | |
| 7919 self.assertFalse(i in sourceInstances) | |
| 7920 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7921 | |
| 7922 for i in GetModified(a, 'Series', 2): | |
| 7923 self.assertFalse(i in sourceSeries) | |
| 7924 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7925 | |
| 7926 for i in GetModified(a, 'Study', 2): | |
| 7927 self.assertFalse(i in sourceStudies) | |
| 7928 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7929 | |
| 7930 for i in GetModified(a, 'Patient', 2): | |
| 7931 self.assertFalse(i in sourcePatients) | |
| 7932 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7933 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7934 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7935 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7936 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7937 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7938 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7939 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7940 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7941 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7942 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7943 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7944 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7945 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7946 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7947 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7948 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7949 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7950 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7951 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7952 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7953 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7954 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7955 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7956 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7957 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7958 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7959 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7960 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7961 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7962 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7963 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7964 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7965 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7966 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7967 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7968 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7969 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7970 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7971 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7972 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7973 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7974 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7975 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7976 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7977 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7978 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7979 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7980 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7981 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7982 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7983 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7984 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7985 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7986 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7987 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7988 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7989 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7990 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7991 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7992 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7993 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7994 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7995 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7996 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7997 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7998 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7999 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8000 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8001 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8002 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8003 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8004 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8005 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8006 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8007 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8008 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8009 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8010 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8011 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8012 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8013 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8014 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8015 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8016 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8017 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8018 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8019 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8020 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8021 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8022 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8023 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8024 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8025 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8026 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8027 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8028 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8029 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8030 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8031 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8032 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8033 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8034 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8035 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8036 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8037 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8038 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8039 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8040 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8041 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8042 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8043 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8044 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8045 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8046 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8047 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8048 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8049 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8050 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8051 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8052 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8053 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8054 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8055 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8056 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8057 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8058 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8059 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8060 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8061 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8062 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8063 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8064 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8065 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8066 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8067 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8068 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8069 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8070 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8071 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8072 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8073 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8074 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8075 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8076 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8077 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8078 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8079 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8080 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8081 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8082 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8083 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8084 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8085 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8086 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8087 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8088 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8089 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8090 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8091 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8092 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8093 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8094 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8095 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8096 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8097 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8098 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8099 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8100 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8101 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8102 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8103 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8104 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8105 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8106 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8107 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8108 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8109 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8110 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8111 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8112 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8113 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8114 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8115 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8116 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8117 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8118 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8119 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8120 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8121 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8122 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8123 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8124 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8125 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8126 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8127 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8128 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8129 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8130 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8131 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8132 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8133 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8134 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8135 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8136 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8137 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8138 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8139 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8140 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8141 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8142 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8143 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8144 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8145 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8146 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8147 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8148 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8149 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8150 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8151 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8152 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8153 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8154 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8155 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8156 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8157 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8158 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8159 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8160 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 8161 |
| 8162 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 8163 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 8164 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 8165 | |
| 8166 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 8167 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 8168 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 8169 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 8170 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 8171 | |
| 8172 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 8173 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 8174 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 8175 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 8176 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 8177 | |
| 8178 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 8179 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 8180 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 8181 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 8182 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 8183 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8184 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8185 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8186 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8187 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8188 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8189 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8190 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8191 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8192 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8193 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8194 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8195 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8196 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8197 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8198 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8199 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8200 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8201 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8202 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8203 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8204 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8205 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8206 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8207 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8208 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8209 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8210 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8211 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8212 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8213 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8214 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8215 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8216 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8217 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8218 |
| 415 | 8219 |
| 8220 def test_bulk_content(self): | |
| 8221 # New in Orthanc 1.9.4 | |
| 8222 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 8223 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8224 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8225 | |
| 8226 brainixHierarchy = [ | |
| 8227 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 8228 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 8229 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 8230 brainix, | |
| 8231 ] | |
| 8232 | |
| 8233 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 8234 self.assertEqual(4, len(a)) | |
| 8235 b = map(lambda x: x['ID'], a) | |
| 8236 for i in range(4): | |
| 8237 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8238 self.assertTrue('Metadata' in a[i]) |
| 415 | 8239 |
| 8240 for (level, index) in [ | |
| 8241 ('Patient', 0), | |
| 8242 ('Study', 1), | |
| 8243 ('Series', 2), | |
| 8244 ('Instance', 3), | |
| 8245 ]: | |
| 8246 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 8247 'Level' : level }) | |
| 8248 self.assertEqual(1, len(a)) | |
| 8249 self.assertEqual(level, a[0]['Type']) | |
| 8250 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8251 self.assertTrue('Metadata' in a[0]) |
| 415 | 8252 |
| 8253 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8254 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8255 'Metadata' : False }) |
| 415 | 8256 self.assertEqual(1, len(a)) |
| 8257 self.assertEqual(level, a[0]['Type']) | |
| 8258 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8259 self.assertFalse('Metadata' in a[0]) |
| 415 | 8260 |
| 8261 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 8262 self.assertEqual(3, len(a)) | |
| 8263 for item in a: | |
| 8264 self.assertEqual('Instance', item['Type']) | |
| 8265 b = map(lambda x: x['ID'], a) | |
| 8266 self.assertTrue(knee1 in b) | |
| 8267 self.assertTrue(knee2 in b) | |
| 8268 self.assertTrue(brainix in b) | |
| 8269 | |
| 8270 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 8271 'Level' : 'Series' }) | |
| 8272 self.assertEqual(2, len(a)) | |
| 8273 for item in a: | |
| 8274 self.assertEqual('Series', item['Type']) | |
| 8275 b = map(lambda x: x['ID'], a) | |
| 8276 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 8277 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 8278 | |
| 8279 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8280 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8281 'Metadata' : False }) |
| 415 | 8282 self.assertEqual(1, len(a)) |
| 8283 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 8284 self.assertEqual('Study', a[0]['Type']) | |
| 8285 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8286 self.assertFalse('Metadata' in a[0]) |
| 415 | 8287 |
| 8288 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8289 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8290 'Metadata' : True }) |
| 415 | 8291 self.assertEqual(1, len(a)) |
| 8292 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 8293 self.assertEqual('Patient', a[0]['Type']) | |
| 8294 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8295 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8296 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8297 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8298 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8299 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8300 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8301 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 8302 |
| 8303 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 8304 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 8305 'Level' : level }) | |
| 8306 self.assertEqual(2, len(a)) | |
| 8307 for item in a: | |
| 8308 self.assertEqual(level, item['Type']) | |
| 8309 b = map(lambda x: x['ID'], a) | |
| 8310 if level == 'Instance': | |
| 8311 self.assertTrue(knee1 in b) | |
| 8312 self.assertTrue(brainix in b) | |
| 8313 else: | |
| 8314 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 8315 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8316 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8317 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8318 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8319 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8320 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8321 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8322 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8323 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8324 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8325 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8326 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8327 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8328 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8329 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8330 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8331 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8332 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8333 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8334 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8335 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8336 |
| 417 | 8337 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 8338 'KeepSource' : False | |
| 8339 })) # Neither "Instances", nor "Series" | |
| 8340 | |
| 8341 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8342 'KeepSource' : False, | |
| 8343 'Instances' : [ ], | |
| 8344 'Series' : [ ] | |
| 8345 })) # Empty "Instances" and "Series" | |
| 8346 | |
| 8347 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8348 'Instances' : [ 'nope' ], | |
| 8349 'KeepSource' : False | |
| 8350 })) | |
| 8351 | |
| 8352 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8353 'Series' : [ 'nope' ], | |
| 8354 'KeepSource' : False | |
| 8355 })) | |
| 8356 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8357 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8358 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8359 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8360 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8361 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8362 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8363 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8364 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8365 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8366 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8367 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8368 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8369 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8370 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8371 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8372 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8373 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8374 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8375 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8376 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8377 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8378 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8379 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8380 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8381 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8382 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8383 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8384 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8385 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8386 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8387 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8388 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8389 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8390 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8391 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8392 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8393 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8394 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8395 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8396 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8397 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8398 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8399 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8400 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8401 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8402 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8403 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8404 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8405 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8406 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8407 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8408 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8409 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8410 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8411 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8412 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8413 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8414 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8415 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8416 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8417 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8418 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8419 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8420 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8421 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8422 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8423 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8424 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8425 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8426 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8427 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8428 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8429 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8430 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8431 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8432 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8433 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8434 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8435 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8436 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8437 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8438 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8439 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8440 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8441 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8442 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8443 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8444 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8445 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8446 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8447 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8448 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8449 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8450 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8451 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8452 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8453 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8454 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8455 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8456 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8457 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8458 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8459 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8460 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8461 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8462 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8463 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8464 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8465 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8466 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8467 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8468 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8469 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8470 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8471 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8472 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8473 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8474 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8475 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8476 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8477 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8478 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8479 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8480 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8481 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8482 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8483 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8484 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8485 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8486 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8487 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8488 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8489 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8490 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8491 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8492 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8493 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8494 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8495 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8496 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8497 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8498 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8499 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8500 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8501 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8502 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8503 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8504 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8505 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8506 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8507 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8508 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8509 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8510 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8511 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8512 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8513 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8514 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8515 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8516 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8517 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8518 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8519 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8520 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8521 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8522 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8523 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8524 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8525 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8526 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8527 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8528 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8529 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8530 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8531 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8532 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8533 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8534 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8535 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8536 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8537 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8538 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8539 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8540 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8541 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8542 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8543 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8544 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8545 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8546 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8547 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8548 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8549 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8550 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8551 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8552 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8553 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8554 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8555 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8556 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8557 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8558 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8559 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8560 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8561 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8562 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8563 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8564 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8565 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8566 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8567 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8568 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8569 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8570 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8571 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8572 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8573 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8574 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8575 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8576 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8577 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8578 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8579 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8580 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8581 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8582 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8583 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8584 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8585 |
| 8586 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8587 self.assertEqual(1, len(last)) | |
| 8588 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8589 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8590 |
| 8591 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8592 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8593 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8594 | |
| 8595 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8596 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8597 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8598 | |
| 8599 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8600 self.assertEqual(1, len(last)) | |
| 8601 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8602 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8603 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8604 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8605 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8606 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8607 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8608 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8609 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8610 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8611 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8612 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8613 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8614 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8615 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8616 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8617 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8618 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8619 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8620 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8621 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8622 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8623 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8624 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8625 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8626 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8627 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8628 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8629 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8630 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8631 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8632 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8633 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8634 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8635 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8636 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8637 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8638 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8639 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8640 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8641 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8642 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8643 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8644 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8645 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8646 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8647 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8648 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8649 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8650 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8651 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8652 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8653 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8654 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8655 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8656 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8657 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8658 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8659 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8660 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8661 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8662 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8663 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8664 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8665 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8666 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8667 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8668 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8669 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8670 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8671 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8672 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8673 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8674 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8675 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8676 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8677 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8678 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8679 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8680 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8681 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8682 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8683 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8684 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8685 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8686 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8687 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8688 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8689 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8690 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8691 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8692 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8693 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8694 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8695 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8696 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8697 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8698 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8699 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8700 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8701 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8702 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8703 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8704 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8705 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8706 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8707 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8708 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8709 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8710 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8711 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8712 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8713 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8714 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8715 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8716 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8717 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8718 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8719 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8720 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8721 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8722 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8723 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8724 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8725 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8726 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8727 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8728 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8729 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8730 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8731 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8732 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8733 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8734 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8735 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8736 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8737 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8738 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8739 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8740 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8741 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8742 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8743 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8744 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8745 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8746 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8747 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8748 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8749 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8750 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8751 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8752 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8753 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8754 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8755 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8756 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8757 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8758 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8759 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8760 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8761 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8762 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8763 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8764 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8765 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8766 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8767 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8768 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8769 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8770 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8771 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8772 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8773 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8774 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8775 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8776 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8777 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8778 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8779 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8780 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8781 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8782 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8783 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8784 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8785 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8786 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8787 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8788 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8789 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8790 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8791 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8792 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8793 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8794 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8795 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8796 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8797 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8798 |
| 8799 | |
| 8800 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8801 # New in Orthanc 1.10.0 |
| 440 | 8802 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 8803 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8804 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8805 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 8806 |
| 8807 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8808 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8809 self.assertEqual(numpy.float32, c.dtype) | |
| 8810 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8811 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8812 self.assertAlmostEqual(536, c.max()) |
| 440 | 8813 |
| 8814 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8815 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8816 self.assertEqual(numpy.uint16, c.dtype) | |
| 8817 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8818 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8819 self.assertEqual(536, c.max()) |
| 440 | 8820 |
| 8821 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8822 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8823 self.assertEqual(numpy.float32, c.dtype) | |
| 8824 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8825 | |
| 8826 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8827 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8828 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8829 self.assertEqual(numpy.float32, c.dtype) | |
| 8830 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8831 | |
| 8832 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8833 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8834 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8835 self.assertEqual(numpy.float32, c.dtype) | |
| 8836 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8837 | |
| 8838 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8839 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8840 self.assertEqual(1, len(c.files)) | |
| 8841 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8842 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8843 | |
| 8844 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8845 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8846 self.assertEqual(numpy.float32, c.dtype) | |
| 8847 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8848 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8849 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8850 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8851 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8852 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8853 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8854 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8855 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8856 self.assertAlmostEqual(255, c.max()) |
| 440 | 8857 |
| 8858 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8859 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8860 self.assertEqual(numpy.float32, c.dtype) | |
| 8861 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8862 | |
| 8863 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8864 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8865 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8866 self.assertEqual(numpy.float32, c.dtype) | |
| 8867 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8868 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8869 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
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parents:
440
diff
changeset
|
8870 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
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parents:
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diff
changeset
|
8871 self.assertEqual(numpy.float32, c.dtype) |
|
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expanded test_numpy
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parents:
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diff
changeset
|
8872 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
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parents:
440
diff
changeset
|
8873 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
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parents:
440
diff
changeset
|
8874 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
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parents:
440
diff
changeset
|
8875 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8876 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8877 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
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parents:
440
diff
changeset
|
8878 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8879 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8880 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8881 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8882 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8883 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8884 def test_find_patient_name_with_brackets_and_star(self): |
|
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added tests for patient names with square brackets
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parents:
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diff
changeset
|
8885 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8886 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8887 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8888 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8889 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8890 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8891 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8892 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8893 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8894 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8895 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8896 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8897 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8898 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
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parents:
441
diff
changeset
|
8899 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8900 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8901 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8902 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8903 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8904 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8905 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8906 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8907 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8908 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8909 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8910 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8911 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8912 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8913 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8914 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8915 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8916 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8917 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8918 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8919 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8920 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8921 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8922 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8923 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8924 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8925 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8926 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8927 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8928 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8929 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8930 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8931 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8932 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8933 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8934 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8935 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8936 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8937 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8938 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8939 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8940 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8941 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8942 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8943 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8944 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8945 def test_rest_find_requested_tags(self): |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8946 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
| 471 | 8947 |
| 8948 # Upload instances | |
| 8949 for i in range(2): | |
| 8950 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 8951 | |
| 8952 # Patient level | |
| 8953 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 8954 'CaseSensitive' : False, | |
| 8955 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8956 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
| 471 | 8957 'Expand': True |
| 8958 }) | |
| 8959 self.assertEqual(1, len(a)) | |
| 8960 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8961 self.assertIn('PatientID', a[0]['RequestedTags']) | |
| 8962 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
| 8963 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
| 8964 | |
| 8965 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8966 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
| 8967 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
| 8968 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
| 8969 | |
| 8970 # Study level, request patient tags too | |
| 8971 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 8972 'CaseSensitive' : False, | |
| 8973 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 8974 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
| 8975 'Expand': True | |
| 8976 }) | |
| 8977 self.assertEqual(1, len(a)) | |
| 8978 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8979 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 8980 | |
| 8981 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8982 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 8983 | |
| 8984 | |
| 8985 # Series level, request patient and study tags too | |
| 8986 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 8987 'CaseSensitive' : False, | |
| 8988 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8989 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
| 471 | 8990 'Expand': True |
| 8991 }) | |
| 8992 self.assertEqual(1, len(a)) | |
| 8993 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8994 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 8995 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8996 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 8997 |
| 8998 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8999 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9000 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9001 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
| 471 | 9002 |
| 9003 | |
| 9004 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
| 9005 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9006 'CaseSensitive' : False, | |
| 9007 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9008 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
| 471 | 9009 'Expand': True |
| 9010 }) | |
| 9011 self.assertEqual(1, len(a)) | |
| 9012 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9013 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9014 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
| 9015 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9016 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9017 |
| 9018 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9019 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9020 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9021 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9022 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9023 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9024 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9025 def test_rest_find_requested_tags_computed_tags(self): |
| 471 | 9026 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9027 # Upload instances | |
| 9028 for i in range(2): | |
| 9029 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9030 | |
| 9031 | |
| 9032 # Patient level | |
| 9033 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9034 'CaseSensitive' : False, | |
| 9035 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9036 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
| 9037 'Expand': True | |
| 9038 }) | |
| 9039 self.assertEqual(1, len(a)) | |
| 9040 | |
| 9041 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9042 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
| 9043 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
| 9044 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
| 9045 | |
| 9046 # Study level | |
| 9047 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9048 'CaseSensitive' : False, | |
| 9049 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9050 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
| 9051 'Expand': True | |
| 9052 }) | |
| 9053 self.assertEqual(1, len(a)) | |
| 9054 | |
| 9055 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9056 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9057 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9058 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9059 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9060 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
| 9061 | |
| 9062 # Series level | |
| 9063 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9064 'CaseSensitive' : False, | |
| 9065 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9066 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
| 9067 'Expand': True | |
| 9068 }) | |
| 9069 self.assertEqual(1, len(a)) | |
| 9070 | |
| 9071 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9072 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9073 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
| 9074 | |
| 9075 # Instance level | |
| 9076 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 9077 'CaseSensitive' : False, | |
| 9078 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9079 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 9080 'Expand': True | |
| 9081 }) | |
| 9082 self.assertEqual(2, len(a)) | |
| 9083 | |
| 9084 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9085 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9086 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 456 | 9087 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9088 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9089 |
| 471 | 9090 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9091 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9092 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9093 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9094 | |
| 9095 # list series and request tags that are not in the default main dicom tags | |
| 9096 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
| 9097 | |
| 9098 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
| 9099 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
| 9100 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9101 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9102 | |
| 9103 # list studies and request patient and studies tags | |
| 9104 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
| 9105 | |
| 9106 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9107 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9108 | |
| 9109 | |
| 9110 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
| 9111 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
| 9112 | |
| 9113 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9114 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9115 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
| 9116 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9117 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
| 9118 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
| 9119 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9120 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9121 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9122 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9123 |
| 471 | 9124 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9125 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9126 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9127 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9128 | |
| 9129 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9130 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
| 9131 | |
| 9132 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9133 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9134 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9135 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9136 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9137 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9138 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9139 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9140 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9141 |
| 471 | 9142 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9143 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9144 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9145 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9146 | |
| 9147 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9148 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
| 9149 | |
| 9150 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9151 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9152 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9153 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9154 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9155 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 9156 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9157 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9158 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9159 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9160 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9161 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9162 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9163 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
|
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9164 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9165 def test_create_png16RBGA(self): |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9166 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9167 png = f.read() |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9168 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9169 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9170 json.dumps({ |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9171 'PatientName' : 'Jodogne', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9172 'Modality' : 'CT', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9173 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9174 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9175 })) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9176 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9177 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9178 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9179 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9180 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9181 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9182 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9183 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9184 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9185 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9186 j = DoGet(_REMOTE, i['Path']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9187 self.assertEqual('Instance', j['Type']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9188 self.assertEqual(j['ID'], i['ID']) |
|
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9189 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9190 def test_storescu_custom_host_ip_port(self): |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9191 DropOrthanc(_LOCAL) |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9192 DropOrthanc(_REMOTE) |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9193 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9194 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9195 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9196 # upload to self -> orthanctest shall not receive any content |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9197 DoPost(_REMOTE, '/modalities/self/store', { |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9198 'Resources' : [ a['ID']] |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9199 }) |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9200 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9201 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9202 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9203 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9204 DoPost(_REMOTE, '/modalities/self/store', { |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9205 'LocalAet' : 'YOP', |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9206 'CalledAet' : c['AET'], |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9207 'Port' : c['Port'], |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9208 'Host' : c['Host'], |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9209 'Resources' : [ a['ID']] |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
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9210 }) |
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9211 |
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9212 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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9213 |
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9214 DropOrthanc(_REMOTE) |
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9215 DropOrthanc(_LOCAL) |
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9216 |
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9217 def test_rle_planar_configuration(self): |
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9218 # This test failed in Orthanc <= 1.11.2 |
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9219 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ |
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9220 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] |
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9221 uri = '/instances/%s/preview' % a |
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9222 im = GetImage(_REMOTE, uri) |
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9223 self.assertEqual('RGB', im.mode) |
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9224 self.assertEqual(1475, im.size[0]) |
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9225 self.assertEqual(1475, im.size[1]) |
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9226 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) |