Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 440:3a5222eb4c93
added test_numpy
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 26 Nov 2021 19:03:45 +0100 |
| parents | 2ca9e31d582f |
| children | 21a45ddc9256 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2021 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
|
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
| 34 | |
| 11 | 35 from PIL import ImageChops |
| 3 | 36 from Toolbox import * |
| 13 | 37 from xml.dom import minidom |
| 312 | 38 from datetime import datetime |
| 3 | 39 |
| 40 _LOCAL = None | |
| 41 _REMOTE = None | |
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42 _DOCKER = False |
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43 |
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44 |
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45 def SetOrthancParameters(local, remote, withinDocker): |
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46 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 47 _LOCAL = local |
| 48 _REMOTE = remote | |
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49 _DOCKER = withinDocker |
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50 |
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51 |
| 14 | 52 def ExtractDicomTags(rawDicom, tags): |
| 53 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 54 f.write(rawDicom) | |
| 55 f.flush() | |
| 45 | 56 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 57 |
| 58 result = [] | |
| 59 for tag in tags: | |
| 60 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 61 if match == None: | |
| 62 result.append('') | |
| 63 else: | |
| 64 result.append(match.group(1)) | |
| 65 | |
| 66 return result | |
| 67 | |
| 68 | |
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69 def CompareLists(a, b): |
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70 if len(a) != len(b): |
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71 return False |
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72 |
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73 for i in range(len(a)): |
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74 d = a[i] - b[i] |
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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76 return False |
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77 |
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78 return True |
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79 |
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80 |
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81 def CompareTags(a, b, tagsToIgnore): |
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82 for i in tagsToIgnore: |
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83 if i in a: |
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84 del a[i] |
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85 if i in b: |
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86 del b[i] |
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87 |
| 123 | 88 if a.keys() == b.keys(): |
| 89 return True | |
| 90 else: | |
| 91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 92 return False | |
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93 |
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94 |
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95 def CallFindScu(args): |
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96 p = subprocess.Popen([ FindExecutable('findscu'), |
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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99 stderr=subprocess.PIPE) |
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100 return p.communicate()[1] |
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101 |
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102 |
| 142 | 103 def GetMoveScuCommand(): |
| 104 return [ | |
| 105 FindExecutable('movescu'), | |
| 106 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 107 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 108 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 109 _REMOTE['Server'], | |
| 110 str(_REMOTE['DicomPort']) | |
| 111 ] | |
| 112 | |
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113 |
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114 def IsDicomUntilPixelDataStored(orthanc): |
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115 # This function detects whether the "StorageCompression" option is |
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116 # "true", OR the storage area does not support read-range |
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117 |
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118 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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119 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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120 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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121 if a != 0x03a0: |
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122 raise Exception('Internal error') |
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123 |
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124 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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125 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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126 raise Exception('Internal error') |
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127 |
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128 DoDelete(orthanc, '/instances/%s' % i) |
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129 |
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130 if len(a) == 1: |
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131 return False |
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132 elif 'dicom-until-pixel-data' in a: |
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133 return True |
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134 else: |
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135 raise Exception('Internal error') |
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136 |
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137 else: |
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138 return False |
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139 |
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140 |
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141 def CallMoveScu(args): |
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142 try: |
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143 subprocess.check_call(GetMoveScuCommand() + args, |
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144 stderr = subprocess.PIPE) |
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145 except subprocess.CalledProcessError as e: |
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146 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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147 # that has been introduced in DCMTK 3.6.2. This error code is |
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148 # expected by some tests that try and C-MOVE non-existing |
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149 # DICOM instances. |
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150 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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151 if e.returncode != 69: |
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152 raise e |
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153 |
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154 |
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155 def GenerateTestSequence(): |
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156 return [ |
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157 { |
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158 'StudyDescription': 'Hello^', |
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159 'ReferencedStudySequence' : [ |
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160 { |
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161 'StudyDescription': 'Toto', |
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162 }, |
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163 { |
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164 'StudyDescription': 'Tata', |
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165 }, |
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166 ] |
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167 }, |
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168 { |
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169 'StudyDescription': 'Sébastien^', |
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170 'StudyDate' : '19700202', |
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171 } |
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172 ] |
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173 |
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174 |
| 3 | 175 class Orthanc(unittest.TestCase): |
| 176 def setUp(self): | |
| 83 | 177 if (sys.version_info >= (3, 0)): |
| 178 # Remove annoying warnings about unclosed socket in Python 3 | |
| 179 import warnings | |
| 180 warnings.simplefilter("ignore", ResourceWarning) | |
| 181 | |
| 3 | 182 DropOrthanc(_LOCAL) |
| 183 DropOrthanc(_REMOTE) | |
| 174 | 184 UninstallLuaCallbacks(_REMOTE) |
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185 |
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186 # Reset stuff possibly set by some integration tests |
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187 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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188 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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189 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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190 |
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191 for i in [ 'toto', 'tata' ]: |
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192 if i in DoGet(_REMOTE, '/modalities'): |
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193 DoDelete(_REMOTE, '/modalities/%s' % i) |
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194 if i in DoGet(_REMOTE, '/peers'): |
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195 DoDelete(_REMOTE, '/peers/%s' % i) |
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196 |
| 312 | 197 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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198 |
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199 def AssertSameImages(self, truth, url): |
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200 im = GetImage(_REMOTE, url) |
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201 self.assertTrue(CompareLists(truth, im.getdata())) |
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202 |
| 3 | 203 |
| 204 def test_system(self): | |
| 177 | 205 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 206 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 207 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 208 | |
| 209 systemInfo = DoGet(_REMOTE, '/system') | |
| 210 if systemInfo["Version"] == "mainline": | |
| 211 print "Skipping version checks since you're currently in mainline" | |
| 212 return | |
| 213 | |
| 173 | 214 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
| 215 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
| 216 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
| 217 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
| 218 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
| 3 | 219 |
| 220 def test_upload(self): | |
| 173 | 221 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 222 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 223 | |
| 224 sizeDummyCT = 2472 | |
| 225 sizeOverwrite = 2476 | |
| 226 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 227 | |
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228 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 229 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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230 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 231 self.assertEqual(instance, u['ID']) |
| 3 | 232 self.assertEqual('Success', u['Status']) |
| 173 | 233 |
| 183 | 234 if True: |
| 235 # New test for Orthanc 1.4.3 | |
| 236 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 237 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 238 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 239 | |
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240 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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241 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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242 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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243 j = 0 |
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244 else: |
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245 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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246 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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247 |
| 173 | 248 s = sizeDummyCT + j |
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249 |
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250 if isCompressed: |
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251 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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252 else: |
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253 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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254 |
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255 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 256 |
| 3 | 257 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 258 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 259 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 260 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 261 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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262 |
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263 if isCompressed: |
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264 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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265 else: |
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266 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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267 |
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268 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 269 |
| 270 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 271 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 272 self.assertEqual('KNIX', i['PatientName']) |
| 273 | |
| 274 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 275 # Overwriting | |
| 276 self.assertEqual('Success', u['Status']) | |
| 277 else: | |
| 278 self.assertEqual('AlreadyStored', u['Status']) | |
| 279 | |
| 280 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 281 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 282 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 283 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 284 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 285 | |
| 286 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 287 # Overwriting | |
| 288 self.assertEqual('Success', u['Status']) | |
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289 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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290 j2 = 0 |
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291 else: |
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292 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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293 self.assertNotEqual(j, j2) |
| 173 | 294 s2 = sizeOverwrite + j2 |
| 295 self.assertNotEqual(s, s2) | |
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296 if isCompressed: |
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297 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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298 else: |
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299 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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300 |
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301 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 302 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 303 self.assertEqual('ANOTHER', i['PatientName']) | |
| 304 else: | |
| 305 self.assertEqual('AlreadyStored', u['Status']) | |
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306 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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307 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 308 |
| 5 | 309 def test_upload_2(self): |
| 3 | 310 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 311 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 312 self.assertEqual(i, instance['ID']) | |
| 313 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 314 instance['MainDicomTags']['SOPInstanceUID']) | |
| 315 | |
| 316 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 317 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 318 series['MainDicomTags']['SeriesInstanceUID']) | |
| 319 | |
| 320 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 321 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 322 study['MainDicomTags']['StudyInstanceUID']) | |
| 323 | |
| 324 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 325 self.assertEqual('ozp00SjY2xG', | |
| 326 patient['MainDicomTags']['PatientID']) | |
| 327 | |
| 328 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 329 self.assertEqual(2472, len(dicom)) | |
| 330 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 331 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 332 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 333 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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334 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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335 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 336 |
| 337 | |
| 5 | 338 def test_images(self): |
| 339 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 340 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 341 |
| 5 | 342 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 343 self.assertEqual("L", im.mode) | |
| 344 self.assertEqual(512, im.size[0]) | |
| 345 self.assertEqual(358, im.size[1]) | |
| 346 | |
| 347 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 348 self.assertEqual("L", im.mode) | |
| 349 self.assertEqual(512, im.size[0]) | |
| 350 self.assertEqual(358, im.size[1]) | |
| 351 | |
| 352 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 353 self.assertEqual(512, im.size[0]) | |
| 354 self.assertEqual(358, im.size[1]) | |
| 355 | |
| 356 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 357 self.assertEqual("L", im.mode) | |
| 358 self.assertEqual(512, im.size[0]) | |
| 359 self.assertEqual(358, im.size[1]) | |
| 360 | |
| 361 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 362 self.assertEqual("L", im.mode) | |
| 363 self.assertEqual(512, im.size[0]) | |
| 364 self.assertEqual(358, im.size[1]) | |
| 365 | |
| 366 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 367 self.assertEqual(512, im.size[0]) | |
| 368 self.assertEqual(358, im.size[1]) | |
| 64 | 369 |
| 370 # This is Little Endian Explicit | |
| 371 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 372 | |
| 6 | 373 |
| 374 def test_hierarchy(self): | |
| 375 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 376 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 377 UploadFolder(_REMOTE, 'Knee/T1') | |
| 378 UploadFolder(_REMOTE, 'Knee/T2') | |
| 379 | |
| 380 p = DoGet(_REMOTE, '/patients') | |
| 381 s = DoGet(_REMOTE, '/studies') | |
| 382 t = DoGet(_REMOTE, '/series') | |
| 383 self.assertEqual(2, len(p)) | |
| 384 self.assertEqual(2, len(s)) | |
| 385 self.assertEqual(4, len(t)) | |
| 386 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 387 | |
| 388 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 389 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 390 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 391 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 392 | |
| 393 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 394 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 395 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 396 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 397 | |
| 398 self.assertTrue(brainixPatient in p) | |
| 399 self.assertTrue(kneePatient in p) | |
| 400 self.assertTrue(brainixStudy in s) | |
| 401 self.assertTrue(kneeStudy in s) | |
| 402 self.assertTrue(brainixEpi in t) | |
| 403 self.assertTrue(brainixFlair in t) | |
| 404 self.assertTrue(kneeT1 in t) | |
| 405 self.assertTrue(kneeT2 in t) | |
| 406 | |
| 407 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 408 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 409 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 410 | |
| 411 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 412 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 413 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 414 | |
| 415 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 416 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 417 | |
| 418 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 419 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 420 | |
| 421 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 422 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 423 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 424 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 425 | |
| 426 for patient in p: | |
| 427 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 428 self.assertEqual(patient, study['ParentPatient']) | |
| 429 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 430 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 431 self.assertEqual('Unknown', series['Status']) |
| 6 | 432 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 433 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 434 | |
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435 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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436 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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437 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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438 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 439 |
| 440 | |
| 441 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 442 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 443 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 444 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 445 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 446 self.assertEqual(None, r) | |
| 447 | |
| 448 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 449 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 450 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 451 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 452 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 453 self.assertEqual('Study', r['Type']) | |
| 454 self.assertEqual(kneeStudy, r['ID']) | |
| 455 | |
| 456 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 457 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 458 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 459 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 460 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 461 self.assertEqual('Series', r['Type']) | |
| 462 self.assertEqual(kneeT1, r['ID']) | |
| 463 | |
| 464 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 465 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 466 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 467 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 468 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 469 self.assertEqual(None, r) | |
| 470 | |
| 471 DropOrthanc(_REMOTE) | |
| 472 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 473 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 474 |
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475 def test_delete_cascade(self): |
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476 # make sure deleting the last instance of a study deletes the series, study and patient |
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477 |
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478 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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479 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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480 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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481 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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482 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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483 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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484 |
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485 DoDelete(_REMOTE, '/instances/%s' % a) |
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486 |
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487 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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488 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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489 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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490 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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491 |
| 7 | 492 |
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493 def test_multiframe(self): |
| 7 | 494 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 495 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 496 | |
| 497 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 498 self.assertEqual("L", im.mode) | |
| 499 self.assertEqual(512, im.size[0]) | |
| 500 self.assertEqual(512, im.size[1]) | |
| 501 | |
| 502 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 503 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 504 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 505 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 506 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 507 | |
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508 |
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509 def test_changes(self): |
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510 # Check emptiness |
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511 c = DoGet(_REMOTE, '/changes') |
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512 self.assertEqual(0, len(c['Changes'])) |
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513 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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514 self.assertTrue(c['Done']) |
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515 c = DoGet(_REMOTE, '/changes?last') |
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516 self.assertEqual(0, len(c['Changes'])) |
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517 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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518 self.assertTrue(c['Done']) |
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519 |
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520 # Add 1 instance |
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521 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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522 c = DoGet(_REMOTE, '/changes') |
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523 begin = c['Last'] |
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524 self.assertEqual(4, len(c['Changes'])) |
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525 self.assertTrue(c['Done']) |
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526 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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527 |
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528 # Check the order in which the creation events are reported |
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529 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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530 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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531 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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532 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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533 |
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534 c = DoGet(_REMOTE, '/changes?last') |
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535 self.assertEqual(1, len(c['Changes'])) |
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536 self.assertEqual(begin, c['Last']) |
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537 self.assertTrue(c['Done']) |
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538 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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539 self.assertEqual(1, len(c['Changes'])) |
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540 self.assertEqual(begin, c['Last']) |
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541 self.assertTrue(c['Done']) |
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542 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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543 self.assertEqual(1, len(c['Changes'])) |
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544 self.assertEqual(begin - 1, c['Last']) |
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545 self.assertFalse(c['Done']) |
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546 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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547 self.assertEqual(1, len(c['Changes'])) |
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548 self.assertEqual(begin - 2, c['Last']) |
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549 self.assertFalse(c['Done']) |
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550 |
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551 UploadFolder(_REMOTE, 'Knee/T1') |
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552 UploadFolder(_REMOTE, 'Knee/T2') |
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553 since = begin |
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554 countPatients = 0 |
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555 countStudies = 0 |
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556 countSeries = 0 |
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557 countInstances = 0 |
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558 completed = 0 |
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559 while True: |
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|
560 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
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|
561 since = c['Last'] |
|
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changeset
|
562 for i in c['Changes']: |
|
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changeset
|
563 if i['ResourceType'] == 'Instance': |
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|
564 countInstances += 1 |
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|
565 if i['ResourceType'] == 'Patient': |
|
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changeset
|
566 countPatients += 1 |
|
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|
567 if i['ResourceType'] == 'Study': |
|
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|
568 countStudies += 1 |
|
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changeset
|
569 if i['ResourceType'] == 'Series': |
|
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changeset
|
570 countSeries += 1 |
|
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changeset
|
571 if i['ChangeType'] == 'NewInstance': |
|
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|
572 countInstances += 1 |
|
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|
573 if i['ChangeType'] == 'NewPatient': |
|
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changeset
|
574 countPatients += 1 |
|
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changeset
|
575 if i['ChangeType'] == 'NewStudy': |
|
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changeset
|
576 countStudies += 1 |
|
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changeset
|
577 if i['ChangeType'] == 'NewSeries': |
|
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changeset
|
578 countSeries += 1 |
|
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changeset
|
579 if i['ChangeType'] == 'CompletedSeries': |
|
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changeset
|
580 completed += 1 |
|
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changeset
|
581 self.assertTrue('ID' in i) |
|
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|
582 self.assertTrue('Path' in i) |
|
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|
583 self.assertTrue('Seq' in i) |
|
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changeset
|
584 if c['Done']: |
|
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diff
changeset
|
585 break |
|
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diff
changeset
|
586 |
|
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|
587 self.assertEqual(2 * 50, countInstances) |
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588 self.assertEqual(2 * 1, countPatients) |
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|
589 self.assertEqual(2 * 1, countStudies) |
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|
590 self.assertEqual(2 * 2, countSeries) |
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|
591 self.assertEqual(0, completed) |
|
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diff
changeset
|
592 |
|
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diff
changeset
|
593 |
|
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changeset
|
594 def test_archive(self): |
|
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595 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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596 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 597 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 598 | |
| 599 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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600 self.assertEqual(2, len(z.namelist())) |
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changeset
|
601 |
|
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changeset
|
602 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
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603 self.assertEqual(2, len(z.namelist())) |
|
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changeset
|
604 |
|
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diff
changeset
|
605 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
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606 self.assertEqual(1, len(z.namelist())) |
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changeset
|
607 |
|
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|
608 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 609 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 610 | |
| 611 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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|
612 self.assertEqual(2, len(z.namelist())) |
| 192 | 613 |
| 614 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 615 'Resources' : [ brainix, knee ] | |
| 616 }) | |
| 617 self.assertEqual(3, len(z.namelist())) | |
|
403
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changeset
|
618 |
|
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|
619 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
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|
620 'Synchronous' : True |
|
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|
621 }) |
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changeset
|
622 self.assertEqual(2, len(z.namelist())) |
| 192 | 623 |
|
8
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|
624 |
|
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|
625 def test_media_archive(self): |
|
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626 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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|
627 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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diff
changeset
|
628 |
|
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diff
changeset
|
629 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
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|
630 self.assertEqual(3, len(z.namelist())) |
|
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changeset
|
631 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
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changeset
|
632 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
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changeset
|
633 self.assertTrue('DICOMDIR' in z.namelist()) |
|
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diff
changeset
|
634 |
|
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diff
changeset
|
635 try: |
|
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changeset
|
636 os.remove('/tmp/DICOMDIR') |
|
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changeset
|
637 except: |
|
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changeset
|
638 # The file does not exist |
|
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changeset
|
639 pass |
|
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changeset
|
640 |
|
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diff
changeset
|
641 z.extract('DICOMDIR', '/tmp') |
| 45 | 642 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
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changeset
|
643 stderr = subprocess.STDOUT).split('\n') |
|
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|
644 self.assertEqual(3, len(a)) |
|
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|
645 self.assertTrue(a[0].startswith('Warning')) |
|
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646 self.assertEqual('BasicDirectory', a[1]) |
|
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|
647 self.assertEqual('', a[2]) |
|
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|
648 |
| 45 | 649 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
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changeset
|
650 stderr = subprocess.STDOUT).split('\n') |
|
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|
651 self.assertEqual(1, len(a)) |
|
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changeset
|
652 self.assertEqual('', a[0]) |
|
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7
diff
changeset
|
653 |
| 45 | 654 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
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changeset
|
655 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
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changeset
|
656 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
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changeset
|
657 |
|
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parents:
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diff
changeset
|
658 os.remove('/tmp/DICOMDIR') |
| 10 | 659 |
| 660 | |
| 661 def test_protection(self): | |
| 662 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 663 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 664 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 665 a = DoGet(_REMOTE, '/patients')[0] | |
| 666 b = DoGet(_REMOTE, '/patients')[1] | |
| 667 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 668 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 669 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 670 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 671 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 672 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 673 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 674 | |
| 675 | |
| 12 | 676 def test_raw_tags(self): |
| 10 | 677 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 678 | |
| 679 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 680 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 681 | |
| 682 s = '/instances/%s/content/' % i | |
| 683 | |
| 684 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 685 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 686 | |
| 687 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 688 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 689 | |
| 690 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 691 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 692 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 693 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 694 | |
| 695 for i in DoGet(_REMOTE, '/instances'): | |
| 696 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 697 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 698 | |
| 699 | |
| 700 def test_raw_tags_mdn(self): | |
| 701 # Bug reported by Cyril Paulus | |
| 702 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 703 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 704 | |
| 705 | |
| 706 def test_modify_instance(self): | |
| 707 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 708 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 709 json.dumps({ | |
| 710 "Replace" : { | |
| 711 "PatientName" : "hello", | |
| 712 #"PatientID" : "world" | |
| 713 }, | |
| 714 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
715 "RemovePrivateTags" : True |
| 10 | 716 }), |
| 717 'application/json') | |
| 718 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 719 | |
| 720 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 721 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 722 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 723 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 724 | |
| 725 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 726 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 727 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 728 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 729 | |
| 730 | |
| 731 def test_modify_series(self): | |
| 732 # Upload 4 images from the same series | |
| 733 for i in range(4): | |
| 734 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 735 | |
| 736 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 737 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 738 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 739 'application/json')['ID'] | |
| 740 | |
| 741 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 742 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 743 self.assertEqual(4, len(instances)) | |
| 744 for i in instances: | |
| 745 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 746 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 747 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 748 | |
| 749 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 750 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 751 | |
| 752 | |
| 753 def test_modify_study(self): | |
| 754 # Upload 4 images from the 2 series of the same study | |
| 755 for i in range(4): | |
| 756 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 757 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 758 | |
| 759 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 760 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 761 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 762 'application/json')['ID'] | |
| 763 | |
| 764 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 765 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 766 self.assertEqual(2, len(series)) | |
| 767 for s in series: | |
| 768 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 769 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 770 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 771 | |
| 772 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 773 for i in instances: | |
| 774 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 775 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 776 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 777 | |
| 778 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 779 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 780 | |
| 781 | |
| 782 def test_anonymize_series(self): | |
| 783 # Upload 4 images from the same series | |
| 784 for i in range(4): | |
| 785 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 786 | |
| 787 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 788 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 789 '{}', | |
| 790 'application/json')['ID'] | |
| 791 | |
| 792 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 793 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 794 self.assertEqual(4, len(instances)) | |
| 795 for i in instances: | |
| 796 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 797 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 798 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 799 | |
| 800 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 801 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 802 | |
| 803 | |
| 804 def test_anonymize_study(self): | |
| 805 # Upload 4 images from the 2 series of the same study | |
| 806 for i in range(4): | |
| 807 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 808 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 809 | |
| 810 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 811 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 812 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 813 'application/json')['ID'] | |
| 814 | |
| 815 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 816 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 817 self.assertEqual(2, len(series)) | |
| 818 for s in series: | |
| 819 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 820 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 821 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 822 | |
| 823 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 824 for i in instances: | |
| 825 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 826 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 827 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 828 | |
| 829 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 830 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 831 |
| 832 | |
| 833 | |
| 834 def test_storescu(self): | |
| 835 # Check emptiness | |
| 836 e = DoGet(_REMOTE, '/exports') | |
| 837 self.assertEqual(0, len(e['Exports'])) | |
| 838 self.assertEqual(0, e['Last']) | |
| 839 self.assertTrue(e['Done']) | |
| 840 e = DoGet(_REMOTE, '/exports?last') | |
| 841 self.assertEqual(0, len(e['Exports'])) | |
| 842 self.assertEqual(0, e['Last']) | |
| 843 self.assertTrue(e['Done']) | |
| 844 | |
| 845 # Add 1 instance | |
| 846 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 847 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 848 | |
| 849 # Export the instance | |
| 850 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 851 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 852 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 853 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 854 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 855 | |
| 856 e = DoGet(_REMOTE, '/exports') | |
| 857 self.assertEqual(1, len(e['Exports'])) | |
| 858 self.assertTrue(e['Done']) | |
| 859 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 860 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 861 self.assertEqual(1, len(e['Exports'])) | |
| 862 self.assertTrue(e['Done']) | |
| 863 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 864 e = DoGet(_REMOTE, '/exports?last') | |
| 865 self.assertEqual(1, len(e['Exports'])) | |
| 866 self.assertTrue(e['Done']) | |
| 867 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 868 seqInstance = e['Last'] | |
| 869 | |
| 870 # Export the series | |
| 871 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 872 | |
| 873 e = DoGet(_REMOTE, '/exports') | |
| 874 self.assertEqual(2, len(e['Exports'])) | |
| 875 self.assertTrue(e['Done']) | |
| 876 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 877 seqSeries = e['Last'] | |
| 878 self.assertNotEqual(seqInstance, seqSeries) | |
| 879 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 880 self.assertEqual(1, len(e['Exports'])) | |
| 881 self.assertFalse(e['Done']) | |
| 882 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 883 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 884 self.assertEqual(1, len(e['Exports'])) | |
| 885 self.assertTrue(e['Done']) | |
| 886 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 887 e = DoGet(_REMOTE, '/exports?last') | |
| 888 self.assertEqual(1, len(e['Exports'])) | |
| 889 self.assertTrue(e['Done']) | |
| 890 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 891 | |
| 892 # Export the study | |
| 893 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 894 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 895 | |
| 896 # Export the patient | |
| 897 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 898 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 899 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 900 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 901 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 902 | |
| 903 e = DoGet(_REMOTE, '/exports') | |
| 904 self.assertEqual(4, len(e['Exports'])) | |
| 905 self.assertTrue(e['Done']) | |
| 906 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 907 seqPatient = e['Last'] | |
| 908 self.assertNotEqual(seqInstance, seqSeries) | |
| 909 self.assertNotEqual(seqSeries, seqStudy) | |
| 910 self.assertNotEqual(seqStudy, seqPatient) | |
| 911 self.assertTrue(seqInstance < seqSeries) | |
| 912 self.assertTrue(seqSeries < seqStudy) | |
| 913 self.assertTrue(seqStudy < seqPatient) | |
| 914 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 915 self.assertEqual(1, len(e['Exports'])) | |
| 916 self.assertFalse(e['Done']) | |
| 917 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 918 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 919 self.assertEqual(1, len(e['Exports'])) | |
| 920 self.assertFalse(e['Done']) | |
| 921 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 922 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 923 self.assertEqual(1, len(e['Exports'])) | |
| 924 self.assertFalse(e['Done']) | |
| 925 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 926 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 927 self.assertEqual(1, len(e['Exports'])) | |
| 928 self.assertTrue(e['Done']) | |
| 929 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 930 e = DoGet(_REMOTE, '/exports?last') | |
| 931 self.assertEqual(1, len(e['Exports'])) | |
| 932 self.assertTrue(e['Done']) | |
| 933 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 934 | |
| 935 | |
| 936 # Check the content of the logged information | |
| 937 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 938 | |
| 939 if 'PatientID' in e[0]: | |
| 940 # Since Orthanc 0.8.6 | |
| 941 patient = 'PatientID' | |
| 942 study = 'StudyInstanceUID' | |
| 943 series = 'SeriesInstanceUID' | |
| 944 instance = 'SOPInstanceUID' | |
| 945 else: | |
| 946 # Up to Orthanc 0.8.5 | |
| 947 patient = 'PatientId' | |
| 948 study = 'StudyInstanceUid' | |
| 949 series = 'SeriesInstanceUid' | |
| 950 instance = 'SopInstanceUid' | |
| 951 | |
| 952 for k in range(4): | |
| 953 self.assertTrue('Date' in e[k]) | |
| 954 self.assertTrue('Seq' in e[k]) | |
| 955 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 956 | |
| 957 self.assertEqual(10, len(e[0])) | |
| 958 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 959 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 960 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 961 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 962 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 963 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 964 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 965 | |
| 966 self.assertEqual(9, len(e[1])) | |
| 967 self.assertEqual('Series', e[1]['ResourceType']) | |
| 968 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 969 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 970 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 971 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 972 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 973 | |
| 974 self.assertEqual(8, len(e[2])) | |
| 975 self.assertEqual('Study', e[2]['ResourceType']) | |
| 976 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 977 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 978 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 979 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 980 | |
| 981 self.assertEqual(7, len(e[3])) | |
| 982 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 983 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 984 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 985 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 986 | |
| 987 DropOrthanc(_REMOTE) | |
| 988 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 989 | |
| 990 | |
| 991 def test_store_peer(self): | |
| 992 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 993 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 994 | |
| 995 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 996 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 997 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 998 | |
| 999 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1000 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1001 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1002 | |
| 1003 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1004 | |
| 1005 DropOrthanc(_REMOTE) | |
| 1006 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1007 | |
| 1008 | |
| 1009 def test_bulk_storescu(self): | |
| 1010 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1011 | |
| 1012 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1013 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1014 | |
| 1015 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1016 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1017 | |
| 1018 DropOrthanc(_LOCAL) | |
| 1019 | |
| 1020 # Send using patient's UUID | |
| 1021 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1022 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1023 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1024 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1025 | |
| 1026 | |
| 1027 def test_color(self): | |
| 1028 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1029 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1030 self.assertEqual("RGB", im.mode) | |
| 1031 self.assertEqual(41, im.size[0]) | |
| 1032 self.assertEqual(41, im.size[1]) | |
| 1033 | |
| 1034 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1035 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1036 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1037 | |
| 1038 | |
| 12 | 1039 def test_faking_ruby_put(self): |
| 1040 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1041 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1042 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1043 a = DoGet(_REMOTE, '/patients')[0] | |
| 1044 b = DoGet(_REMOTE, '/patients')[1] | |
| 1045 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1046 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1047 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1048 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1049 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1050 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1051 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1052 | |
| 1053 | |
| 1054 def test_faking_ruby_delete(self): | |
| 1055 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1056 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1057 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1058 a = DoGet(_REMOTE, '/patients')[0] | |
| 1059 b = DoGet(_REMOTE, '/patients')[1] | |
| 1060 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1061 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1062 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1063 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1064 | |
| 1065 | |
| 1066 def test_faking_google_put(self): | |
| 1067 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1068 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1069 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1070 a = DoGet(_REMOTE, '/patients')[0] | |
| 1071 b = DoGet(_REMOTE, '/patients')[1] | |
| 1072 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1073 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1074 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1075 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1076 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1077 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1078 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1079 | |
| 1080 | |
| 1081 def test_faking_google_delete(self): | |
| 1082 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1083 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1084 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1085 a = DoGet(_REMOTE, '/patients')[0] | |
| 1086 b = DoGet(_REMOTE, '/patients')[1] | |
| 1087 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1088 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1089 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1090 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1091 | |
| 1092 | |
| 1093 def test_lua(self): | |
| 1094 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1095 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1096 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1097 | |
| 1098 | |
| 1099 def test_metadata(self): | |
| 1100 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1101 p = DoGet(_REMOTE, '/patients')[0] | |
| 1102 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1103 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1104 |
| 1105 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
| 1106 self.assertEqual(1, len(m)) | |
| 1107 self.assertEqual('LastUpdate', m[0]) | |
| 1108 | |
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1109 # The lines below failed on Orthanc <= 1.8.2 |
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1110 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1111 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1112 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1113 |
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1114 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
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1115 self.assertEqual(1, len(m)) |
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1116 self.assertEqual('LastUpdate', m[0]) |
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1117 |
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1118 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1119 self.assertEqual(2, len(m)) |
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1120 self.assertTrue('LastUpdate' in m) |
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1121 |
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1122 # New in Orthanc 1.9.0 |
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1123 self.assertTrue('RemoteAET' in m) |
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1124 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1125 |
| 12 | 1126 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
|
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1127 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1128 self.assertEqual(9, len(m)) |
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1129 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1130 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1131 else: |
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1132 self.assertEqual(8, len(m)) |
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1133 |
| 12 | 1134 self.assertTrue('IndexInSeries' in m) |
| 1135 self.assertTrue('ReceptionDate' in m) | |
| 1136 self.assertTrue('RemoteAET' in m) | |
|
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1137 self.assertTrue('Origin' in m) |
|
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1138 self.assertTrue('TransferSyntax' in m) |
|
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1139 self.assertTrue('SopClassUid' in m) |
| 145 | 1140 self.assertTrue('RemoteIP' in m) |
| 1141 self.assertTrue('HttpUsername' in m) | |
|
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1142 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1143 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1144 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1145 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1146 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1147 |
| 1148 # Play with custom metadata | |
|
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1149 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1150 self.assertEqual('200', headers['status']) |
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1151 self.assertEqual('', body) |
|
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1152 |
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1153 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
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1154 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1155 else: |
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1156 self.assertFalse('ETag' in headers) |
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1157 self.assertFalse('etag' in headers) |
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1158 |
| 12 | 1159 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1160 self.assertEqual(2, len(m)) | |
| 1161 self.assertTrue('LastUpdate' in m) | |
| 1162 self.assertTrue('5555' in m) | |
| 1163 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1164 |
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1165 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1166 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1167 'If-Match' : headers['etag'] |
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1168 }) |
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1169 else: |
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1170 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1171 |
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1172 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1173 self.assertEqual('200', headers['status']) |
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1174 self.assertEqual('hello', body) |
|
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1175 |
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1176 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1177 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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1178 'If-Match' : headers['etag'] |
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1179 }) |
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1180 else: |
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1181 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1182 |
| 12 | 1183 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1184 self.assertEqual(1, len(m)) | |
| 1185 self.assertTrue('LastUpdate' in m) | |
| 13 | 1186 |
| 1187 | |
| 1188 def test_statistics(self): | |
| 1189 # Upload 16 instances | |
| 1190 for i in range(4): | |
| 1191 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1192 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1193 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1194 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1195 | |
| 1196 s = DoGet(_REMOTE, '/statistics') | |
| 1197 self.assertEqual(16, s['CountInstances']) | |
| 1198 self.assertEqual(2, s['CountPatients']) | |
| 1199 self.assertEqual(2, s['CountStudies']) | |
| 1200 self.assertEqual(4, s['CountSeries']) | |
| 1201 d = int(s['TotalUncompressedSize']) | |
| 1202 | |
| 1203 e = 0 | |
| 1204 for patient in DoGet(_REMOTE, '/patients'): | |
| 1205 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1206 self.assertEqual(8, s['CountInstances']) | |
| 1207 self.assertEqual(1, s['CountStudies']) | |
| 1208 self.assertEqual(2, s['CountSeries']) | |
| 1209 e += int(s['UncompressedSize']) | |
| 1210 | |
| 1211 for study in DoGet(_REMOTE, '/studies'): | |
| 1212 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1213 self.assertEqual(8, s['CountInstances']) | |
| 1214 self.assertEqual(2, s['CountSeries']) | |
| 1215 e += int(s['UncompressedSize']) | |
| 1216 | |
| 1217 for series in DoGet(_REMOTE, '/series'): | |
| 1218 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1219 self.assertEqual(4, s['CountInstances']) | |
| 1220 e += int(s['UncompressedSize']) | |
| 1221 | |
| 1222 self.assertEqual(3 * d, e) | |
| 1223 | |
| 1224 | |
| 1225 def test_custom_attachment(self): | |
|
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1226 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1227 |
| 13 | 1228 patient = DoGet(_REMOTE, '/patients')[0] |
| 1229 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1230 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1231 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1232 | |
| 1233 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1234 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
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1235 |
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1236 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1237 if IsDicomUntilPixelDataStored(_REMOTE): |
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1238 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1239 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
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1240 else: |
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1241 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1242 else: |
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1243 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1244 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1245 |
| 1246 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) | |
| 1247 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1248 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1249 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1250 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1251 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1252 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1253 | |
| 1254 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1255 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1256 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1257 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1258 size + | |
| 1259 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1260 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1261 | |
| 1262 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1263 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1264 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1265 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1266 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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1267 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
397
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1268 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
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1269 }) |
|
393
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1270 |
|
394
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1271 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
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1272 self.assertEqual('200', headers['status']) |
|
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1273 self.assertEqual('world2', body) |
| 13 | 1274 |
| 1275 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
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1276 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
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1277 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
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1278 }) |
| 13 | 1279 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1280 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1281 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1282 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1283 | |
| 1284 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
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1285 |
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1286 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1287 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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1288 'If-Match' : headers['etag'] |
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1289 }) |
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1290 else: |
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1291 self.assertFalse('etag' in headers) |
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1292 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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1293 |
| 13 | 1294 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1295 | |
| 1296 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1297 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1298 | |
| 1299 | |
| 1300 def test_incoming_storescu(self): | |
| 1301 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1302 subprocess.check_call([ FindExecutable('storescu'), |
|
44
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1303 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1304 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1305 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1306 | |
|
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1307 i = DoGet(_REMOTE, '/instances') |
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1308 self.assertEqual(1, len(i)) |
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1309 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
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1310 |
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1311 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1312 self.assertEqual(9, len(m)) |
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1313 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1314 else: |
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1315 self.assertEqual(8, len(m)) |
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1316 |
|
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1317 self.assertTrue('IndexInSeries' in m) |
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1318 self.assertTrue('ReceptionDate' in m) |
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1319 self.assertTrue('RemoteAET' in m) |
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1320 self.assertTrue('Origin' in m) |
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1321 self.assertTrue('TransferSyntax' in m) |
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1322 self.assertTrue('SopClassUid' in m) |
| 145 | 1323 self.assertTrue('RemoteIP' in m) |
| 1324 self.assertTrue('CalledAET' in m) | |
|
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1325 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1326 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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1327 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
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1328 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
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1329 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
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1330 |
|
369
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1331 series = DoGet(_REMOTE, '/series')[0] |
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1332 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1333 self.assertEqual(2, len(m)) |
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1334 self.assertTrue('LastUpdate' in m) |
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1335 self.assertTrue('RemoteAET' in m) |
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1336 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1337 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
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1338 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1339 |
| 13 | 1340 |
| 1341 def test_incoming_findscu(self): | |
| 1342 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1343 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1344 | |
| 1345 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1346 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1347 self.assertEqual(2, len(patientNames)) | |
| 1348 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1349 self.assertTrue('Anonymized' in patientNames) | |
| 1350 | |
| 1351 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1352 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1353 self.assertEqual(2, len(series)) | |
| 1354 self.assertTrue('20070208' in series) | |
| 1355 self.assertTrue('19980312' in series) | |
| 1356 | |
|
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1357 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
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1358 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
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1359 self.assertEqual(1, len(series)) |
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1360 self.assertTrue('19980312' in series) |
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1361 |
| 13 | 1362 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1363 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1364 self.assertEqual(1, len(series)) | |
| 1365 | |
| 1366 # Test the "CaseSentitivePN" flag (false by default) | |
| 1367 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1368 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1369 self.assertEqual(1, len(series)) | |
|
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1370 |
| 70 | 1371 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1372 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1373 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1374 self.assertEqual(2, len(studies)) | |
| 1375 self.assertTrue('20070208' in studies) | |
| 1376 self.assertTrue('19980312' in studies) | |
| 1377 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1378 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1379 self.assertEqual(1, len(studies)) | |
| 1380 self.assertTrue('19980312' in studies) | |
| 1381 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1382 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1383 self.assertEqual(1, len(studies)) | |
| 1384 self.assertTrue('19980312' in studies) | |
|
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1385 |
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1386 # Test that "Retrieve AE Title (0008,0054)" is present, which |
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1387 # was *not* the case in Orthanc <= 1.7.2 |
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1388 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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1389 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
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1390 self.assertEqual(2, len(instances)) |
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1391 self.assertEqual('ORTHANC', instances[0].strip()) |
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1392 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1393 |
| 1394 | |
|
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1395 def test_incoming_findscu_2(self): |
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1396 # This test fails if "LookupMode_DatabaseOnly" is used |
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1397 # (sequences are not available in this mode, and only main |
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1398 # DICOM tags are returned) |
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1399 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1400 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1401 |
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1402 # Test returning sequence values (only since Orthanc 0.9.5) |
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1403 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1404 sequences = re.findall('\(0008,2112\)', i) |
|
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1405 self.assertEqual(1, len(sequences)) |
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1406 |
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1407 # Test returning a non-main DICOM tag, |
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1408 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1409 # "MEDPC" in "ColorTestImageJ.dcm" |
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1410 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1411 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1412 self.assertEqual(1, len(tags)) |
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1413 |
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1414 |
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1415 def test_incoming_findscu_3(self): |
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1416 # This test fails if "LookupMode_DatabaseOnly" or |
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1417 # "LookupMode_DiskOnAnswer" is used, as |
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1418 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1419 # tag, as thus a constraint cannot be applied to it |
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1420 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1421 |
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1422 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1423 sequences = re.findall('\(0018,1010\)', i) |
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1424 self.assertEqual(1, len(sequences)) |
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1425 |
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1426 |
| 13 | 1427 def test_incoming_movescu(self): |
| 1428 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
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1429 |
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1430 # No matching patient, so no job is created |
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1431 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1432 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1433 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1434 |
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1435 # 1 Matching patient, track the job |
| 138 | 1436 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1437 '--patient', | |
| 1438 '-k', '0008,0052=PATIENT', | |
| 1439 '-k', 'PatientID=12345678' | |
| 1440 ]))) | |
| 13 | 1441 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1442 | |
| 1443 | |
| 1444 def test_findscu(self): | |
| 1445 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1446 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1447 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1448 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1449 | |
| 1450 # Test the "find-patient" level | |
| 1451 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1452 self.assertEqual(1, len(p)) | |
| 1453 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1454 | |
| 1455 # Test wildcards constraints. The "LO" value representation | |
| 1456 # for PatientID is always case-sensitive, but the "PN" for | |
| 1457 # PatientName might depend on the implementation: | |
| 1458 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1459 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1460 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1461 self.assertEqual(1, len(p)) | |
| 1462 | |
| 1463 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1464 self.assertEqual(1, len(p)) | |
| 1465 | |
| 1466 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1467 self.assertEqual(1, len(p)) | |
| 1468 | |
| 1469 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1470 self.assertEqual(1, len(p)) | |
| 1471 | |
| 1472 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1473 self.assertEqual(0, len(p)) | |
| 1474 | |
| 1475 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1476 self.assertEqual(0, len(p)) | |
| 1477 | |
| 1478 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1479 self.assertEqual(0, len(p)) | |
| 1480 | |
| 1481 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1482 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1483 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1484 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1485 | |
| 1486 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1487 self.assertEqual(2, len(p)) | |
| 1488 | |
| 1489 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1490 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1491 self.assertEqual(1, len(s)) | |
| 1492 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1493 | |
| 1494 # Test range searches | |
| 1495 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1496 'StudyDate' : '-20070101' }) | |
| 1497 self.assertEqual(0, len(t)) | |
| 1498 | |
| 1499 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1500 'StudyDate' : '20090101-' }) | |
| 1501 self.assertEqual(0, len(t)) | |
| 1502 | |
| 1503 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1504 'StudyDate' : '20070101-' }) | |
| 1505 self.assertEqual(1, len(t)) | |
| 1506 | |
| 1507 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1508 'StudyDate' : '-20090101' }) | |
| 1509 self.assertEqual(1, len(t)) | |
| 1510 | |
| 1511 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1512 'StudyDate' : '20070207-20070207' }) | |
| 1513 self.assertEqual(0, len(t)) | |
| 1514 | |
| 1515 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1516 'StudyDate' : '20070208-20070208' }) | |
| 1517 self.assertEqual(1, len(t)) | |
| 1518 | |
| 1519 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1520 'StudyDate' : '20070209-20070209' }) | |
| 1521 self.assertEqual(0, len(t)) | |
| 1522 | |
| 1523 # Test the ModalitiesInStudy tag | |
| 1524 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1525 'PatientID' : 'B9uTHKOZ', | |
| 1526 'ModalitiesInStudy' : 'US' }) | |
| 1527 self.assertEqual(0, len(t)) | |
| 1528 | |
| 1529 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1530 'PatientID' : 'B9uTHKOZ', | |
| 1531 'ModalitiesInStudy' : 'CT' }) | |
| 1532 self.assertEqual(1, len(t)) | |
| 1533 | |
| 1534 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1535 'PatientID' : 'B9uTHKOZ', | |
| 1536 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1537 self.assertEqual(1, len(t)) | |
| 1538 | |
| 1539 # Test the "find-series" level | |
| 1540 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1541 'PatientID' : 'B9uTHKOZ', | |
| 1542 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1543 self.assertEqual(1, len(t)) | |
| 1544 | |
| 1545 # Test "\" separator | |
| 1546 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1547 'PatientID' : 'B9uTHKOZ', | |
| 1548 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1549 'Modality' : 'MR\\CT\\US' }) | |
| 1550 self.assertEqual(1, len(t)) | |
| 1551 | |
| 1552 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1553 'PatientID' : 'B9uTHKOZ', | |
| 1554 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1555 'Modality' : 'MR\\US' }) | |
| 1556 self.assertEqual(0, len(t)) | |
| 1557 | |
| 1558 | |
| 1559 def test_update_modalities(self): | |
| 1560 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1561 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1562 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1563 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1564 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1565 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1566 DoDelete(_REMOTE, '/modalities/tata') |
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1567 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1568 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
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1569 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1570 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1571 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1572 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1573 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1574 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1575 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1576 |
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1577 # New in Orthanc 1.8.1 |
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1578 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1579 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1580 |
| 13 | 1581 DoDelete(_REMOTE, '/modalities/toto') |
| 1582 DoDelete(_REMOTE, '/modalities/tata') | |
| 1583 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1584 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1585 | |
| 1586 | |
| 1587 def test_update_peers(self): | |
| 1588 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1589 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1590 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1591 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1592 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1593 'Username': 'user', | |
| 1594 'Password' : 'pass', | |
| 1595 'RemoteSelf' : 'self' }) | |
| 128 | 1596 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1597 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1598 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1599 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1600 |
| 1601 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1602 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1603 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1604 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1605 else: | |
| 1606 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1607 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1608 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1609 | |
| 128 | 1610 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1611 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1612 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1613 |
| 13 | 1614 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1615 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1616 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1617 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1618 |
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1619 # New in Orthanc 1.8.1 |
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1620 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1621 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1622 |
| 13 | 1623 DoDelete(_REMOTE, '/peers/toto') |
| 1624 DoDelete(_REMOTE, '/peers/tata') | |
| 1625 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1626 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1627 | |
| 1628 | |
| 1629 def test_mesterhazy_modification(self): | |
| 1630 # When I modify a series ( eg. curl | |
| 1631 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1632 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1633 # series is added to a new Study, instead of the existing | |
| 1634 # Study. Fixed in Orthanc 0.7.5 | |
| 1635 | |
| 1636 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1637 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1638 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1639 | |
| 1640 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1641 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1642 | |
| 1643 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1644 | |
| 1645 | |
| 1646 def test_create(self): | |
| 1647 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1648 json.dumps({ | |
| 1649 'PatientName' : 'Jodogne', | |
| 1650 'Modality' : 'CT', | |
| 58 | 1651 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1652 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1653 })) | |
| 1654 | |
| 1655 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1656 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1657 | |
| 1658 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1659 self.assertEqual((5, 5), png.size) | |
| 1660 | |
| 38 | 1661 j = DoGet(_REMOTE, i['Path']) |
| 1662 self.assertEqual('Instance', j['Type']) | |
| 1663 self.assertEqual(j['ID'], i['ID']) | |
| 1664 | |
| 13 | 1665 |
| 1666 def test_pilates(self): | |
| 1667 # "SCU failed error when accessing orthanc with osirix" by | |
| 1668 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1669 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1670 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1671 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1672 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1673 | |
| 1674 | |
| 1675 def test_shared_tags(self): | |
| 1676 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1677 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1678 p = DoGet(_REMOTE, '/patients')[0] | |
| 1679 | |
| 1680 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1681 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
|
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1682 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1683 |
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1684 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1685 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1686 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1687 |
| 13 | 1688 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1689 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1690 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1691 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1692 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1693 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1694 | |
| 1695 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1696 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1697 | |
| 1698 | |
| 1699 def test_modules(self): | |
| 1700 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1701 p = DoGet(_REMOTE, '/patients')[0] | |
| 1702 s = DoGet(_REMOTE, '/studies')[0] | |
| 1703 t = DoGet(_REMOTE, '/series')[0] | |
| 1704 | |
| 1705 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1706 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1707 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1708 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1709 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1710 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1711 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1712 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1713 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1714 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1715 | |
| 1716 | |
| 1717 def test_auto_directory(self): | |
| 1718 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1719 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1720 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1721 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1722 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1723 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1724 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1725 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1726 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1727 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1728 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1729 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1730 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1731 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1732 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1733 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1734 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1735 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1736 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1737 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1738 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1739 |
| 1740 | |
| 1741 def test_echo(self): | |
| 1742 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1743 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1744 |
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1745 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1746 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1747 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1748 |
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1749 # New in Orthanc 1.8.1 |
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1750 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1751 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1752 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1753 |
| 353 | 1754 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1755 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1756 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1757 'AET' : _REMOTE['DicomAet'], | |
| 1758 'Host' : _REMOTE['Server'], | |
| 1759 'Port' : _REMOTE['DicomPort'], | |
| 1760 'CheckFind' : True | |
| 1761 }) | |
| 1762 | |
| 13 | 1763 |
| 1764 def test_xml(self): | |
| 1765 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1766 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1767 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1768 self.assertEqual(len(items), len(json)) | |
| 1769 | |
| 1770 self.assertTrue('dicom-conformance' in json) | |
| 1771 | |
| 1772 ok = False | |
| 1773 for i in items: | |
| 1774 if i.childNodes[0].data == 'dicom-conformance': | |
| 1775 ok = True | |
| 1776 self.assertTrue(ok) | |
| 1777 | |
| 1778 | |
|
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1779 def test_googlecode_issue_16(self): |
| 13 | 1780 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1781 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1782 self.assertEqual('0018,1063', t) | |
| 1783 | |
| 1784 | |
|
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1785 def test_googlecode_issue_22(self): |
| 13 | 1786 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1787 a = [ | |
| 1788 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1789 "c69eee9a51eea3e8611e82e578897254", | |
| 1790 "315666be83e2d0111c77bc0996d84901", | |
| 1791 "3e27aa959d911172c48a1436443c72b1", | |
| 1792 "958642c9e7e9d232d3869faff546058c", | |
| 1793 "5e7ea8e3e4230cae707d143481355c59", | |
| 1794 "eda37f83558d858a596175aed8b2ad47", | |
| 1795 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1796 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1797 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1798 "e2f39e85896fe58876654b94cd0b5013", | |
| 1799 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1800 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1801 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1802 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1803 "806b8b3e300c615099c11a5ec23465aa", | |
| 1804 "7c836aa298ba6eef96434579af631a11", | |
| 1805 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1806 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1807 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1808 "44e6670f127e612a2b4aa60a0d207698", | |
| 1809 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1810 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1811 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1812 ] | |
| 1813 | |
| 1814 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1815 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1816 | |
| 1817 for i in range(len(a)): | |
| 1818 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1819 | |
| 1820 | |
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1821 def test_googlecode_issue_19(self): |
|
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1822 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1823 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1824 | |
| 1825 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1826 if not HasGdcmPlugin(_REMOTE): |
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1827 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1828 |
| 1829 | |
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1830 def test_googlecode_issue_37(self): |
| 13 | 1831 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1832 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1833 | |
| 1834 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1835 'CaseSensitive' : True, | |
| 1836 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1837 self.assertEqual(1, len(a)) | |
| 14 | 1838 |
| 1839 | |
| 1840 def test_rest_find(self): | |
| 1841 # Upload 8 instances | |
| 1842 for i in range(2): | |
| 1843 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1844 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1845 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1846 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1847 | |
| 1848 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1849 'CaseSensitive' : False, | |
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1850 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1851 self.assertEqual(1, len(a)) |
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1852 |
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1853 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1854 'CaseSensitive' : False, |
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1855 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1856 self.assertEqual(2, len(a)) |
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1857 |
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1858 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1859 'CaseSensitive' : False, |
| 14 | 1860 'Query' : { 'PatientName' : '*n*' }}) |
| 1861 self.assertEqual(2, len(a)) | |
| 1862 | |
| 1863 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1864 'CaseSensitive' : True, | |
| 1865 'Query' : { 'PatientName' : '*n*' }}) | |
| 1866 self.assertEqual(0, len(a)) | |
| 1867 | |
| 1868 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1869 'Level' : 'Patient', | |
| 1870 'CaseSensitive' : False, | |
| 1871 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1872 self.assertEqual(1, len(a)) | |
| 1873 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1874 | |
| 1875 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1876 'CaseSensitive' : True, | |
| 1877 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1878 self.assertEqual(0, len(a)) | |
| 1879 | |
| 1880 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1881 'CaseSensitive' : True, | |
| 1882 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1883 self.assertEqual(1, len(a)) | |
| 1884 | |
| 1885 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1886 'CaseSensitive' : True, | |
| 1887 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1888 self.assertEqual(2, len(a)) | |
| 1889 | |
| 1890 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1891 'CaseSensitive' : True, | |
| 1892 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1893 self.assertEqual(4, len(a)) | |
| 1894 | |
| 1895 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1896 self.assertEqual(2, len(a)) | |
| 1897 | |
| 1898 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1899 self.assertEqual(2, len(a)) | |
| 1900 | |
| 1901 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1902 self.assertEqual(4, len(a)) | |
| 1903 | |
| 1904 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1905 self.assertEqual(8, len(a)) | |
| 1906 | |
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1907 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1908 'Expand' : True, |
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1909 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1910 self.assertEqual(1, len(a)) |
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1911 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1912 |
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1913 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1914 'Expand' : True, |
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1915 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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1916 self.assertEqual(2, len(a)) |
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1917 for i in range(2): |
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1918 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1919 |
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1920 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1921 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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1922 self.assertEqual(0, len(a)) |
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1923 |
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1924 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1925 'Expand' : True, |
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1926 'Query' : { 'StudyDate' : '-20061201' }}) |
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1927 self.assertEqual(1, len(a)) |
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1928 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1929 |
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1930 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1931 'Expand' : True, |
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1932 'Query' : { 'StudyDate' : '-20051201' }}) |
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1933 self.assertEqual(0, len(a)) |
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1934 |
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1935 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1936 'Expand' : True, |
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1937 'Query' : { 'StudyDate' : '20061201-' }}) |
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1938 self.assertEqual(2, len(a)) |
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1939 for i in range(2): |
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1940 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1941 |
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1942 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1943 'Expand' : True, |
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1944 'Query' : { 'StudyDate' : '20061202-' }}) |
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1945 self.assertEqual(1, len(a)) |
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1946 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1947 |
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1948 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1949 'Expand' : True, |
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1950 'Query' : { 'StudyDate' : '20080819-' }}) |
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1951 self.assertEqual(1, len(a)) |
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1952 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1953 |
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1954 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1955 'Expand' : True, |
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1956 'Query' : { 'StudyDate' : '20080820-' }}) |
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1957 self.assertEqual(0, len(a)) |
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1958 |
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1959 |
| 14 | 1960 |
| 1961 def test_rest_query_retrieve(self): | |
| 1962 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1963 | |
| 1964 # Upload 8 instances | |
| 1965 for i in range(2): | |
| 1966 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1967 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1968 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1969 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1970 | |
| 1971 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1972 for p in DoGet(_REMOTE, '/patients'): | |
| 1973 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 1974 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 1975 | |
| 1976 for q in DoGet(_REMOTE, '/queries'): | |
| 1977 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 1978 | |
| 1979 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1980 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 1981 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
| 27 | 1982 'Query' : { |
| 1983 'PatientName' : '*NE*', | |
| 1984 'StudyDate' : '*', | |
| 1985 }})['ID'] | |
| 14 | 1986 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
| 1987 | |
| 1988 b = DoGet(_REMOTE, '/queries/%s' % a) | |
| 1989 self.assertTrue('answers' in b) | |
| 1990 self.assertTrue('level' in b) | |
| 1991 self.assertTrue('modality' in b) | |
| 1992 self.assertTrue('query' in b) | |
| 1993 self.assertTrue('retrieve' in b) | |
| 1994 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
| 1995 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
| 1996 | |
| 1997 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
| 27 | 1998 self.assertEqual(2, len(q)) |
| 14 | 1999 self.assertTrue('PatientName' in q) |
| 27 | 2000 self.assertTrue('StudyDate' in q) |
| 14 | 2001 self.assertEqual('*NE*', q['PatientName']) |
| 27 | 2002 self.assertEqual('*', q['StudyDate']) |
| 14 | 2003 |
| 2004 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 2005 | |
| 2006 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
| 2007 self.assertTrue('content' in s) | |
| 2008 self.assertTrue('retrieve' in s) | |
| 2009 | |
| 2010 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
| 2011 self.assertEqual('887', s['PatientID']) | |
| 2012 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
| 2013 | |
| 2014 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2015 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
| 2016 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 2017 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2018 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 2019 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 2020 | |
| 112 | 2021 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
| 14 | 2022 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 2023 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2024 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2025 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 2026 | |
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2027 # New in Orthanc 1.4.3 |
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2028 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2029 self.assertEqual(2, len(s)) |
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2030 for i in range(2): |
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2031 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2032 self.assertEqual('887', s[i]['PatientID']) |
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2033 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2034 |
| 14 | 2035 DoDelete(_REMOTE, '/queries/%s' % a) |
| 2036 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2037 | |
| 2038 | |
| 2039 def test_parent(self): | |
| 2040 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2041 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2042 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2043 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2044 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
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2045 self.assertEqual(instance, u) |
| 14 | 2046 |
| 2047 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2048 self.assertEqual('Patient', a['Type']) | |
| 2049 self.assertEqual(patient, a['ID']) | |
| 2050 | |
| 2051 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2052 self.assertEqual('Patient', a['Type']) | |
| 2053 self.assertEqual(patient, a['ID']) | |
| 2054 | |
| 2055 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2056 self.assertEqual('Study', a['Type']) | |
| 2057 self.assertEqual(study, a['ID']) | |
| 2058 | |
| 2059 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2060 self.assertEqual('Patient', a['Type']) | |
| 2061 self.assertEqual(patient, a['ID']) | |
| 2062 | |
| 2063 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2064 self.assertEqual('Study', a['Type']) | |
| 2065 self.assertEqual(study, a['ID']) | |
| 2066 | |
| 2067 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2068 self.assertEqual('Series', a['Type']) | |
| 2069 self.assertEqual(series, a['ID']) | |
| 2070 | |
| 2071 | |
| 2072 def test_shanon(self): | |
| 2073 def Anonymize(instance, replacements = {}): | |
| 119 | 2074 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2075 'Replace' : replacements, | |
| 2076 'Force' : True, | |
| 2077 }, 'application/json') | |
| 14 | 2078 |
| 2079 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2080 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2081 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2082 | |
| 2083 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2084 ids = [ 'ozp00SjY2xG', | |
| 2085 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2086 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2087 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2088 | |
| 2089 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2090 for i in range(4): | |
| 2091 self.assertNotEqual(ids[i], a[i]) | |
| 2092 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2093 | |
| 2094 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2095 for i in range(4): | |
| 2096 self.assertNotEqual(ids[i], a[i]) | |
| 2097 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2098 | |
| 2099 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2100 self.assertEqual('instance', a[3]) | |
| 2101 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2102 | |
| 2103 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2104 self.assertEqual('series', a[2]) | |
| 2105 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2106 | |
| 2107 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2108 self.assertEqual('study', a[1]) | |
| 2109 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2110 | |
| 2111 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2112 self.assertEqual('patient', a[0]) | |
| 2113 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2114 | |
| 2115 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2116 'StudyInstanceUID' : 'study', | |
| 2117 'SeriesInstanceUID' : 'series', | |
| 2118 'SOPInstanceUID' : 'instance' }), tags) | |
| 2119 self.assertEqual('patient', a[0]) | |
| 2120 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2121 | |
| 2122 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2123 | |
| 2124 | |
| 2125 def test_shanon_2(self): | |
| 2126 def Modify(instance, replacements = {}): | |
| 119 | 2127 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2128 'Replace' : replacements, | |
| 2129 'Force': True, | |
| 2130 }, 'application/json') | |
| 14 | 2131 |
| 2132 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2133 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2134 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2135 | |
| 2136 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2137 ids = [ 'ozp00SjY2xG', | |
| 2138 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2139 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2140 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2141 | |
| 2142 a = ExtractDicomTags(Modify(u), tags) | |
| 2143 self.assertEqual(ids[0], a[0]) | |
| 2144 self.assertEqual(ids[1], a[1]) | |
| 2145 self.assertEqual(ids[2], a[2]) | |
| 2146 self.assertNotEqual(ids[3], a[3]) | |
| 2147 self.assertEqual(0, len(a[4])) | |
| 2148 | |
| 2149 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2150 self.assertEqual(ids[0], a[0]) | |
| 2151 self.assertEqual(ids[1], a[1]) | |
| 2152 self.assertEqual(ids[2], a[2]) | |
| 2153 self.assertEqual('instance', a[3]) | |
| 2154 | |
| 2155 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2156 self.assertEqual(ids[0], a[0]) | |
| 2157 self.assertEqual(ids[1], a[1]) | |
| 2158 self.assertEqual('series', a[2]) | |
| 2159 self.assertNotEqual(ids[3], a[3]) | |
| 2160 | |
| 2161 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2162 self.assertEqual(ids[0], a[0]) | |
| 2163 self.assertEqual('study', a[1]) | |
| 2164 self.assertNotEqual(ids[2], a[2]) | |
| 2165 self.assertNotEqual(ids[3], a[3]) | |
| 2166 | |
| 2167 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2168 self.assertEqual('patient', a[0]) | |
| 2169 self.assertNotEqual(ids[1], a[1]) | |
| 2170 self.assertNotEqual(ids[2], a[2]) | |
| 2171 self.assertNotEqual(ids[3], a[3]) | |
| 2172 | |
| 2173 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2174 'StudyInstanceUID' : 'study', | |
| 2175 'SeriesInstanceUID' : 'series', | |
| 2176 'SOPInstanceUID' : 'instance' }), tags) | |
| 2177 self.assertEqual('patient', a[0]) | |
| 2178 self.assertEqual('study', a[1]) | |
| 2179 self.assertEqual('series', a[2]) | |
| 2180 self.assertEqual('instance', a[3]) | |
| 2181 | |
| 2182 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2183 | |
| 2184 | |
| 2185 def test_instances_tags(self): | |
| 2186 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2187 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2188 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2189 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2190 | |
| 2191 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2192 self.assertEqual(2, len(i)) | |
| 2193 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2194 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2195 | |
| 2196 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2197 self.assertEqual(2, len(i)) | |
| 2198 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2199 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2200 | |
| 2201 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2202 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2203 self.assertEqual(1, len(i)) | |
| 2204 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2205 | |
| 2206 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2207 self.assertEqual(1, len(i)) | |
| 2208 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2209 | |
|
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2210 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2211 self.assertEqual(1, len(i)) |
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2212 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2213 |
| 14 | 2214 |
| 2215 def test_lookup(self): | |
| 2216 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2217 self.assertEqual(0, len(a)) | |
| 2218 | |
| 2219 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2220 | |
| 2221 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2222 self.assertEqual(1, len(a)) | |
| 2223 self.assertEqual('Patient', a[0]['Type']) | |
| 2224 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2225 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2226 | |
| 2227 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2228 self.assertEqual(1, len(a)) | |
| 2229 self.assertEqual('Study', a[0]['Type']) | |
| 2230 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2231 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2232 | |
| 2233 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2234 self.assertEqual(1, len(a)) | |
| 2235 self.assertEqual('Series', a[0]['Type']) | |
| 2236 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2237 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2238 | |
| 2239 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2240 self.assertEqual(1, len(a)) | |
| 2241 self.assertEqual('Instance', a[0]['Type']) | |
| 2242 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2243 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2244 | |
| 2245 DropOrthanc(_REMOTE) | |
| 2246 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2247 self.assertEqual(0, len(a)) | |
| 2248 | |
| 15 | 2249 |
| 2250 def test_autorouting(self): | |
| 2251 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2252 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2253 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2254 | |
| 2255 # Check that this version is >= 0.8.0 | |
| 2256 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2257 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2258 | |
| 2259 UploadInstance(_REMOTE, knee1) | |
| 2260 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2261 | |
| 2262 DropOrthanc(_REMOTE) | |
| 2263 DropOrthanc(_LOCAL) | |
| 174 | 2264 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2265 UploadInstance(_REMOTE, knee1) |
| 2266 UploadInstance(_REMOTE, knee2) | |
| 2267 UploadInstance(_REMOTE, other) | |
| 2268 WaitEmpty(_REMOTE) | |
| 174 | 2269 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2270 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2271 | |
| 2272 DropOrthanc(_REMOTE) | |
| 2273 DropOrthanc(_LOCAL) | |
| 174 | 2274 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2275 UploadInstance(_REMOTE, knee1) |
| 2276 UploadInstance(_REMOTE, knee2) | |
| 2277 UploadInstance(_REMOTE, other) | |
| 2278 WaitEmpty(_REMOTE) | |
| 174 | 2279 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2280 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2281 | |
| 2282 DropOrthanc(_REMOTE) | |
| 2283 DropOrthanc(_LOCAL) | |
| 174 | 2284 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2285 UploadInstance(_REMOTE, knee1) |
| 2286 WaitEmpty(_REMOTE) | |
| 174 | 2287 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2288 i = DoGet(_LOCAL, '/instances') |
| 2289 self.assertEqual(1, len(i)) | |
| 2290 | |
| 2291 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2292 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2293 f.flush() | |
| 45 | 2294 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2295 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2296 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2297 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2298 |
| 2299 | |
| 2300 def test_storescu_rf(self): | |
| 2301 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2302 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2303 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2304 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2305 |
| 2306 | |
| 2307 def test_anonymize_instance(self): | |
| 2308 def AnonymizeAndUpload(instanceId, parameters): | |
| 2309 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2310 'application/json'), 'application/dicom')['ID'] | |
| 2311 | |
| 2312 def ModifyAndUpload(instanceId, parameters): | |
| 2313 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2314 'application/json'), 'application/dicom')['ID'] | |
| 2315 | |
| 2316 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2317 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2318 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2319 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2320 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2321 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2322 | |
| 2323 b = AnonymizeAndUpload(a, '{}') | |
| 2324 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2325 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2326 | |
| 2327 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2328 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2329 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2330 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2331 | |
| 2332 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2333 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2334 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2335 | |
| 2336 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2337 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2338 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2339 | |
| 2340 # Examples from the Wiki | |
|
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2341 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2342 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2343 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2344 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2345 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2346 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2347 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2348 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2349 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2350 | |
|
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2351 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2352 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2353 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2354 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2355 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2356 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2357 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2358 | |
|
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|
2359 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2360 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2361 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2362 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2363 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2364 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2365 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2366 | |
| 2367 | |
| 2368 # Test modify non-existing | |
| 2369 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2370 json.dumps({ | |
| 2371 'PatientName' : 'Jodogne', | |
| 2372 'Modality' : 'CT', | |
| 2373 }))['ID'] | |
| 2374 | |
| 2375 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2376 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2377 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2378 | |
| 2379 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2380 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2381 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2382 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2383 | |
|
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2384 |
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2385 def test_incoming_jpeg(self): |
|
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2386 def storescu(image, acceptUnknownSopClassUid): |
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2387 if acceptUnknownSopClassUid: |
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2388 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2389 else: |
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2390 tmp = [ '-xs' ] |
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2391 |
|
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2392 with open(os.devnull, 'w') as FNULL: |
|
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2393 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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2394 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
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2395 GetDatabasePath(image) ], |
|
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2396 stderr = FNULL) |
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2397 |
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2398 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2399 |
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2400 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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2401 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
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2402 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
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2403 ]) |
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2404 self.assertTrue('1.2.840.10008.1.2' in a) |
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2405 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2406 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2407 self.assertEqual(3, len(a)) |
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2408 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2409 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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2410 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2411 else: |
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2412 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
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2413 |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2414 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False)) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2415 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True)) |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2416 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2417 |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2418 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2419 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2420 self.assertGreaterEqual(42, len(a)) |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2421 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2422 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2423 else: |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2424 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2425 |
|
62
f9c4ce95756f
removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
61
diff
changeset
|
2426 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2427 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2428 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2429 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2430 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2431 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2432 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2433 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2434 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2435 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2436 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2437 | |
| 2438 # This is JPEG lossless | |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2439 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2440 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2441 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2442 |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2443 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2444 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2445 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2446 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2447 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2448 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2449 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2450 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2451 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2452 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2453 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2454 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2455 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2456 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2457 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2458 def test_pixel_data(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2459 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2460 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2461 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2462 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2463 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2464 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2465 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2466 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2467 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2468 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2469 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2470 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2471 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2472 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2473 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2474 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2475 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2476 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2477 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2478 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2479 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2480 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2481 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2482 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2483 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2484 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2485 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2486 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2487 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2488 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2489 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2490 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2491 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2492 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2493 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2494 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2495 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2496 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2497 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2498 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2499 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2500 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2501 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2502 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2503 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2504 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2505 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2506 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2507 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2508 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2509 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2510 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2511 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2512 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2513 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2514 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2515 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2516 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2517 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2518 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2519 def test_decode_rf(self): |
|
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tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2520 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2521 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2522 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2523 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2524 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2525 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2526 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2527 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2528 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2529 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2530 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2531 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2532 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2533 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2534 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2535 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2536 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2537 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2538 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2539 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2540 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2541 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2543 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2544 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2545 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2546 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2547 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2548 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2552 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2568 |
| 2569 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2570 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
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parents:
89
diff
changeset
|
2571 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2572 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2573 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2574 |
| 22 | 2575 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2576 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2577 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2578 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2579 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2580 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2581 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2582 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2583 |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2584 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2585 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2586 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2587 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2588 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2589 |
| 22 | 2590 def test_encodings(self): |
| 23 | 2591 # Latin-1 (ISO_IR 100) |
| 22 | 2592 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2593 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2594 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2595 |
| 2596 # Latin-2 (ISO_IR 101) | |
| 2597 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2598 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2599 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2600 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2601 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2602 | |
|
26
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2603 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2604 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2605 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2606 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2607 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2608 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2609 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2610 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2611 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2612 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2613 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2614 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2615 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2616 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2617 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2618 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2619 }) |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2620 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2621 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2622 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2623 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2624 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2625 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2626 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2627 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2628 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2629 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2630 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2631 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2632 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2633 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2634 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2635 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2636 |
| 174 | 2637 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
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test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
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23
diff
changeset
|
2638 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
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23
diff
changeset
|
2639 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2640 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2641 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2642 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2643 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2644 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2645 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2646 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2647 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2648 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2649 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2650 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
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diff
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|
2651 |
|
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diff
changeset
|
2652 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2653 # Upload 16 instances |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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diff
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|
2654 for i in range(4): |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2655 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
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|
2656 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2657 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2658 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2659 |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2660 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2661 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2662 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2663 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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diff
changeset
|
2664 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2665 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2666 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2667 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2668 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2669 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2670 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2671 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2672 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2673 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2674 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
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parents:
28
diff
changeset
|
2675 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2676 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2677 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2678 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2679 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2680 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2681 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2682 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
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28
diff
changeset
|
2683 |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2684 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2685 s = {} |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2686 since = 0 |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2687 while True: |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2688 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2689 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2690 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2691 |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2692 since += len(t) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2693 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2694 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2695 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2696 self.assertEqual(16, len(s)) |
|
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2697 for instance in DoGet(_REMOTE, '/instances'): |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2698 self.assertTrue(instance in s) |
| 36 | 2699 |
| 2700 | |
| 2701 def test_create_pdf(self): | |
| 2702 # Upload 4 instances | |
| 2703 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2704 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2705 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2706 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2707 | |
| 2708 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2709 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2710 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2711 | |
| 2712 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2713 pdf = f.read() | |
| 2714 | |
| 2715 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2716 json.dumps({ | |
| 2717 'Tags' : { | |
| 2718 'PatientName' : 'Jodogne', | |
| 2719 'Modality' : 'CT', | |
| 2720 }, | |
| 2721 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2722 })) | |
| 2723 | |
| 2724 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2725 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 2726 | |
| 2727 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2728 self.assertEqual(len(b), len(pdf) + 1) | |
| 2729 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2730 | |
| 2731 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2732 json.dumps({ | |
| 2733 'Parent' : brainixPatient, | |
| 2734 'Tags' : { | |
| 2735 'PatientName' : 'Jodogne', | |
| 2736 } | |
| 2737 }))) | |
| 2738 | |
| 2739 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2740 json.dumps({ | |
| 2741 'Parent' : brainixPatient, | |
| 2742 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2743 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2744 })) | |
| 2745 | |
| 2746 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2747 | |
| 2748 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2749 json.dumps({ | |
| 2750 'Parent' : brainixStudy, | |
| 2751 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2752 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2753 })) | |
| 2754 | |
| 2755 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2756 | |
| 2757 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2758 json.dumps({ | |
| 2759 'Parent' : brainixEpi, | |
| 37 | 2760 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2761 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2762 })) | |
| 2763 | |
| 2764 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2765 | |
| 2766 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2767 self.assertEqual(len(b), len(pdf)) | |
| 2768 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2769 | |
| 2770 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2771 |
| 2772 | |
| 2773 def test_create_series(self): | |
| 2774 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2775 json.dumps({ | |
| 2776 'Tags' : { | |
| 40 | 2777 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2778 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2779 'Modality' : 'CT', |
| 2780 }, | |
| 2781 'Content' : [ | |
| 40 | 2782 { |
| 2783 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2784 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2785 }, | |
| 38 | 2786 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2787 ] | |
| 2788 })) | |
| 2789 | |
| 2790 s = DoGet(_REMOTE, i['Path']) | |
| 2791 self.assertEqual('Series', s['Type']) | |
| 2792 self.assertEqual(s['ID'], i['ID']) | |
| 2793 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2794 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2795 self.assertEqual('Complete', s['Status']) | |
| 40 | 2796 |
| 2797 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2798 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2799 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2800 if 'ImageComments' in a: | |
| 2801 self.assertEqual('Tutu', a['ImageComments']) | |
| 2802 else: | |
| 2803 self.assertEqual('Tutu', b['ImageComments']) | |
| 2804 | |
| 2805 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2806 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2807 'Sébastien Jodogne') | |
| 47 | 2808 |
| 2809 | |
| 2810 def test_create_binary(self): | |
| 2811 binary = ''.join(map(chr, range(256))) | |
| 2812 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2813 tags = { | |
| 2814 'PatientName' : 'Jodogne', | |
| 2815 '8899-8899' : encoded | |
| 2816 } | |
| 2817 | |
| 2818 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2819 json.dumps({ | |
| 266 | 2820 'Tags' : tags, |
| 2821 'PrivateCreator' : 'TestBinary', | |
| 47 | 2822 })) |
| 2823 | |
| 2824 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2825 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2826 | |
| 2827 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2828 json.dumps({ | |
| 2829 'InterpretBinaryTags' : False, | |
| 266 | 2830 'Tags' : tags, |
| 2831 'PrivateCreator' : 'TestBinary', | |
| 47 | 2832 })) |
| 2833 | |
| 2834 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2835 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2836 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2837 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2838 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2839 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2840 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2841 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2842 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2843 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2844 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2845 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2846 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2847 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2848 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2849 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2850 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2851 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2852 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2853 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2854 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2855 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2856 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2857 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2858 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2859 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2860 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2861 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2862 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2863 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2864 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2865 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2866 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2867 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2868 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2869 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2870 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2871 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2872 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2873 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2874 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2875 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2876 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2877 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2878 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2879 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2880 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2881 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2882 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2883 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2884 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2885 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2886 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2887 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2888 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2889 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2890 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2891 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2892 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2893 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2894 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2895 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2896 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2897 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2898 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2899 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2900 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2901 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2902 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2903 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2904 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2905 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2906 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2907 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2908 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2909 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2910 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2911 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2912 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2913 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2914 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2915 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2916 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2917 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2918 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2919 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2920 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2921 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2922 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2923 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2924 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2925 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2926 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2927 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2928 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2929 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2930 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2931 }), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2932 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2933 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2934 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2935 |
| 52 | 2936 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 2937 | |
| 2938 | |
| 2939 def test_compression(self): | |
| 2940 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2941 | |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2942 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
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2943 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
2944 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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|
2945 self.assertEqual(1, len(aa)) |
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|
2946 self.assertTrue('dicom' in aa) |
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|
2947 else: |
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|
2948 self.assertEqual(2, len(aa)) |
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changeset
|
2949 self.assertTrue('dicom' in aa) |
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|
2950 self.assertTrue('dicom-as-json' in aa) |
|
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|
2951 |
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|
2952 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
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|
2953 |
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|
2954 # If "StorageCompression" is enabled in the Orthanc to be |
|
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changeset
|
2955 # tested, uncompress the attachment before running the test |
|
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|
2956 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
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changeset
|
2957 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 2958 |
|
380
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|
2959 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
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|
2960 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
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|
2961 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
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|
2962 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
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|
2963 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
2964 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
2965 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
2966 |
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|
2967 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 2968 self.assertTrue('compress' in ops) |
| 2969 self.assertTrue('uncompress' in ops) | |
| 2970 self.assertTrue('is-compressed' in ops) | |
|
380
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|
2971 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
2972 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
2973 |
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|
2974 # Re-compress the attachment |
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|
2975 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
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|
2976 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
2977 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
2978 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
2979 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
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|
2980 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
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|
2981 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
2982 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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2983 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
2984 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
2985 |
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|
2986 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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|
2987 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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2988 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
2989 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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2990 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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|
2991 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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2992 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
2993 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
2994 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
2995 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 2996 |
| 2997 | |
| 2998 def test_ordered_slices(self): | |
| 2999 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3000 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3001 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3002 self.assertEqual('Sequence', o['Type']) | |
| 3003 self.assertEqual(1, len(o['Dicom'])) | |
| 3004 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3005 self.assertEqual(76, len(o['Slices'])) | |
| 3006 for j in range(76): | |
| 3007 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3008 | |
| 68 | 3009 self.assertEqual(1, len(o['SlicesShort'])) |
| 3010 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3011 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3012 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3013 | |
| 53 | 3014 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3015 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3016 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3017 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3018 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3019 | |
| 3020 self.assertEqual('Volume', o['Type']) | |
| 3021 self.assertEqual(3, len(o['Dicom'])) | |
| 3022 self.assertEqual(3, len(o['Slices'])) | |
| 3023 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3024 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3025 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3026 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3027 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3028 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3029 | |
| 68 | 3030 self.assertEqual(3, len(o['SlicesShort'])) |
| 3031 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3032 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3033 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3034 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3035 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3036 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3037 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3038 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3039 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3040 | |
| 53 | 3041 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3042 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3043 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3044 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3045 | |
| 3046 self.assertEqual('Sequence', o['Type']) | |
| 3047 self.assertEqual(2, len(o['Dicom'])) | |
| 3048 self.assertEqual(2, len(o['Slices'])) | |
| 3049 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3050 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3051 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3052 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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diff
changeset
|
3053 |
| 68 | 3054 self.assertEqual(2, len(o['SlicesShort'])) |
| 3055 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3056 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3057 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3058 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3059 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3060 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3061 | |
| 3062 | |
|
54
c5f8a6b0d85e
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diff
changeset
|
3063 |
|
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diff
changeset
|
3064 def test_incoming_movescu_accession(self): |
|
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diff
changeset
|
3065 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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changeset
|
3066 |
|
137
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changeset
|
3067 # No matching patient, so no job is created |
|
54
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diff
changeset
|
3068 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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diff
changeset
|
3069 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
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diff
changeset
|
3070 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
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diff
changeset
|
3071 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
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diff
changeset
|
3072 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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changeset
|
3073 |
|
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changeset
|
3074 # 1 Matching patient, track the job |
| 138 | 3075 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3076 '--study', | |
| 3077 '-k', '0008,0052=STUDY', | |
| 3078 '-k', 'AccessionNumber=A10003245599' | |
| 3079 ]))) | |
|
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|
3080 |
|
54
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diff
changeset
|
3081 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3082 |
| 55 | 3083 |
| 3084 def test_dicom_to_json(self): | |
| 3085 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
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diff
changeset
|
3086 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
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changeset
|
3087 |
|
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diff
changeset
|
3088 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
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diff
changeset
|
3089 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3090 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3091 # Tags for compatibility with DCMTK 3.6.0 |
| 3092 'RETIRED_OtherPatientIDs', | |
| 3093 'OtherPatientIDs', | |
| 3094 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3095 ])) |
| 55 | 3096 |
| 3097 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3098 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3099 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3100 ])) |
| 55 | 3101 |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3102 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3103 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3104 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3105 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3106 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3107 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3108 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3109 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3110 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3111 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3112 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3113 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3114 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3115 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3116 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3117 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3118 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3119 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3120 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3121 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3122 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3123 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3124 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3125 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3126 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3127 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3128 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3129 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3130 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3131 self.assertEqual(aa, tt) |
| 57 | 3132 |
| 3133 | |
| 3134 def test_batch_archive(self): | |
| 3135 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3136 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3137 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3138 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3139 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3140 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3141 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3142 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3143 | |
| 3144 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3145 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3146 self.assertEqual(0, len(z.namelist())) | |
| 3147 | |
| 3148 # One patient | |
| 3149 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3150 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3151 self.assertEqual(4, len(z.namelist())) | |
| 3152 | |
| 3153 # One patient + twice its study + one series from other patient | |
| 3154 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3155 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3156 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3157 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3158 ]) | |
| 3159 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3160 self.assertEqual(6, len(z.namelist())) | |
| 3161 | |
| 3162 # One patient + one series + one instance | |
| 3163 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3164 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3165 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3166 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3167 ]) | |
| 3168 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3169 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3170 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3171 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3172 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3173 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3174 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3175 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3176 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3177 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3178 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3179 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3180 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3181 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3182 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3183 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3184 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3185 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3186 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3187 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3188 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3189 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3190 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3191 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3192 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3193 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3194 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3195 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3196 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3197 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3198 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3199 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3200 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3201 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3202 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3203 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3204 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3205 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3206 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3207 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3208 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3209 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3210 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3211 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3212 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3213 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3214 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3215 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3216 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3217 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3218 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3219 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3220 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3221 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3222 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3223 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3224 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3225 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3226 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3227 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3228 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3229 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3230 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3231 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3232 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3233 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3234 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3235 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3236 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3237 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3238 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3239 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3240 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3241 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3242 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3243 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3244 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3245 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3246 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3247 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3248 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3249 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3250 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3251 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3252 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3253 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3254 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3255 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3256 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3257 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3258 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3259 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3260 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3261 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3262 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3263 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3264 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3265 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3266 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3267 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3268 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3269 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3270 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3271 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3272 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3273 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3274 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3275 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3276 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3277 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3278 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3279 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3280 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3281 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3282 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3283 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3284 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3285 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3286 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3287 self.assertTrue('PT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3288 self.assertTrue('CT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3289 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3290 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3291 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3292 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents:
175
diff
changeset
|
3293 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3294 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3295 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3296 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3297 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3298 def test_decode_transfer_syntax(self): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3299 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3300 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3301 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3302 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3303 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3304 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3305 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3306 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3307 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3308 else: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3309 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3310 self.assertEqual(m, md5) |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3311 |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3312 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3313 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3314 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3315 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3316 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3317 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3318 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3319 | |
| 3320 # The 3 checks below don't work on big-endian | |
| 3321 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3322 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3323 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3324 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3325 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3326 if not HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3327 Check('1.2.840.10008.1.2.4.90', None) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3328 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3329 |
| 3330 | |
| 3331 def test_raw_frame(self): | |
| 3332 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3333 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3334 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3335 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3336 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3337 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3338 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3339 | |
| 3340 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3341 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3342 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3343 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3344 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3345 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3346 self.assertEqual("L", im.mode) | |
| 3347 self.assertEqual(512, im.size[0]) | |
| 3348 self.assertEqual(512, im.size[1]) | |
| 3349 | |
| 3350 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3351 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3352 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3353 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3354 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3355 self.assertEqual(69214, len(a)) | |
| 3356 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3357 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3358 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3359 self.assertEqual("RGB", im.mode) | |
| 3360 self.assertEqual(512, im.size[0]) | |
| 3361 self.assertEqual(512, im.size[1]) | |
| 323 | 3362 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3363 self.assertEqual("RGB", im.mode) |
| 3364 self.assertEqual(512, im.size[0]) | |
| 3365 self.assertEqual(512, im.size[1]) | |
| 81 | 3366 |
| 3367 | |
| 3368 | |
| 3369 def test_rest_movescu(self): | |
| 3370 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3371 | |
| 3372 # Upload 4 instances | |
| 3373 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3374 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3375 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3376 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3377 | |
| 3378 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3379 for p in DoGet(_REMOTE, '/patients'): | |
| 3380 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3381 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3382 | |
| 3383 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3384 | |
| 3385 # Upload instance Brainix/Flair/IM-0001-0001.dcm | |
| 3386 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance', | |
| 3387 'Resources' : [ | |
| 3388 { | |
| 3389 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3390 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3391 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', | |
| 3392 } | |
| 3393 ]}) | |
| 3394 | |
| 3395 # Upload series Brainix/Flair/* | |
| 3396 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3397 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3398 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3399 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3400 | |
| 3401 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3402 'Resources' : [ | |
| 3403 { | |
| 3404 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3405 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3406 } | |
| 3407 ]}) | |
| 3408 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3409 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3410 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3411 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3412 | |
| 3413 # Upload series Brainix/Epi/* | |
| 3414 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3415 'Resources' : [ | |
| 3416 { | |
| 3417 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3418 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3419 } | |
| 3420 ]}) | |
| 3421 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3422 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3423 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3424 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3425 | |
| 3426 # Upload study Knee/* | |
| 3427 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3428 'Resources' : [ | |
| 3429 { | |
| 3430 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3431 } | |
| 3432 ]}) | |
| 3433 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3434 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3435 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3436 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3437 | |
| 3438 # Reset | |
| 3439 for p in DoGet(_REMOTE, '/patients'): | |
| 3440 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3441 | |
| 3442 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3443 | |
| 3444 | |
| 3445 # Upload all at once | |
| 3446 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3447 'Resources' : [ | |
| 3448 { | |
| 3449 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3450 }, | |
| 3451 { | |
| 3452 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3453 } | |
| 3454 ]}) | |
| 3455 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3456 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3457 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3458 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3459 | |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3460 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3461 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3462 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3463 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3464 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3465 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3466 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3467 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3468 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3469 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3470 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3471 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3472 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3473 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3474 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3475 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3476 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3477 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3478 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3479 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3480 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3481 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3482 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3483 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3484 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3485 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3486 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3487 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3488 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3489 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3490 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3491 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3492 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3493 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3494 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3495 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3496 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3497 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3498 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3499 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3500 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3501 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3502 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3503 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3504 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3505 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3506 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3507 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3508 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3509 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3510 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3511 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3512 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3513 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3514 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3515 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3516 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3517 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3518 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3519 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3520 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3521 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3522 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3523 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3524 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3525 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3526 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3527 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3528 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3529 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3530 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3531 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3532 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3533 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3534 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3535 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3536 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3537 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3538 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3539 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3540 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3541 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3542 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3543 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3544 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3545 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3546 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3547 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3548 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3549 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3550 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3551 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3552 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3553 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3554 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3555 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3556 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3557 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3558 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3559 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3560 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3561 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3562 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3563 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3564 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3565 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3566 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3567 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3568 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3569 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3570 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3571 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3572 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3573 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3574 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3575 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3576 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3577 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3578 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3579 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3580 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3581 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3582 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3583 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3584 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3585 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3586 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3587 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3588 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3589 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3590 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3591 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3592 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3593 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3594 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3595 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3596 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3597 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3598 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3599 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3600 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3601 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3602 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3603 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3604 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3605 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3606 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3607 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3608 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3609 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3610 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3611 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3612 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3613 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3614 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3615 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3616 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3617 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3618 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3619 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3620 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3621 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3622 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3623 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3624 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3625 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3626 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3627 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3628 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3629 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3630 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3631 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3632 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3633 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3634 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3635 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3636 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3637 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3638 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3639 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3640 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3641 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3642 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3643 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3644 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3645 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3646 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3647 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3648 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3649 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3650 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3651 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3652 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3653 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3654 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3655 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3656 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3657 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3658 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3659 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3660 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3661 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3662 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3663 }, |
| 119 | 3664 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3665 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3666 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3667 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3668 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3669 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3670 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3671 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3672 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3673 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3674 b = instances[0] if instances[1] == a else instances[1] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3675 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3676 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3677 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3678 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3679 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3680 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3681 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3682 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3683 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {}) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3684 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3685 CompareMainDicomTag('hello', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3686 CompareMainDicomTag('world', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3687 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
| 102 | 3688 |
| 104 | 3689 def test_httpClient_lua(self): |
| 3690 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: | |
| 102 | 3691 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua') |
| 3692 | |
| 3693 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3694 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3695 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3696 def test_bitbucket_issue_44(self): |
| 319 | 3697 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3698 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3699 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3700 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3701 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3702 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3703 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3704 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3705 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3706 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3707 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3708 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3709 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3710 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3711 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3712 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3713 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3714 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3715 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3716 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3717 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3718 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3719 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3720 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3721 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3722 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3723 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3724 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3725 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3726 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3727 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3728 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3729 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3730 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3731 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3732 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3733 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3734 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3735 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3736 def test_bitbucket_issue_42(self): |
| 319 | 3737 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3738 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3739 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3740 modified = DoPost(_REMOTE, |
|
7005cdeeb704
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3741 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3742 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3743 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3744 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3745 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3746 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3747 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3748 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3749 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3750 |
|
113
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3751 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3752 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3753 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3754 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3755 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3756 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3757 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3758 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3759 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3760 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3761 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3762 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3763 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3764 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3765 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3766 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3767 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3768 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3769 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3770 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3771 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3772 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3773 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3774 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3775 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3776 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3777 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3778 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3779 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3780 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3781 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3782 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3783 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3784 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3785 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3786 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3787 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3788 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3789 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3790 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3791 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3792 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3793 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3794 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3795 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3796 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3797 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3798 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3799 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3800 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3801 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3802 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3803 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3804 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3805 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3806 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3807 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3808 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3809 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3810 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3811 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3812 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3813 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
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test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3814 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3815 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3816 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
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parents:
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diff
changeset
|
3817 # "PHI remaining after anonymization" |
| 319 | 3818 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
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diff
changeset
|
3819 |
|
45ebfab035b7
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113
diff
changeset
|
3820 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
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diff
changeset
|
3821 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
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diff
changeset
|
3822 { 'DicomVersion' : version }, |
|
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diff
changeset
|
3823 'application/json') ['ID'] |
|
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diff
changeset
|
3824 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
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diff
changeset
|
3825 self.assertEqual(1, len(a)) |
|
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diff
changeset
|
3826 |
|
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diff
changeset
|
3827 instance = a[0]['ID'] |
|
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diff
changeset
|
3828 |
|
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diff
changeset
|
3829 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
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diff
changeset
|
3830 |
|
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diff
changeset
|
3831 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
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diff
changeset
|
3832 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
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diff
changeset
|
3833 |
|
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diff
changeset
|
3834 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
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changeset
|
3835 # (Patient's Mother's Birth Name) tags |
|
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diff
changeset
|
3836 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
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diff
changeset
|
3837 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
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diff
changeset
|
3838 'application/json')['ID'] |
|
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diff
changeset
|
3839 |
|
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diff
changeset
|
3840 # Use Table E.1-1 from PS 3.15-2008 |
|
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diff
changeset
|
3841 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
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diff
changeset
|
3842 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
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|
3843 self.assertTrue('0032,1033' in tags) |
|
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|
3844 self.assertTrue('0010,1060' in tags) |
|
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3845 |
|
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3846 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
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|
3847 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
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3848 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
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|
3849 self.assertFalse('0032,1033' in tags) |
|
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|
3850 self.assertFalse('0010,1060' in tags) |
|
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|
3851 |
|
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|
3852 t = {} |
|
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|
3853 for (key, value) in tags.iteritems(): |
|
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3854 t[value['Name']] = value['Value'] |
|
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|
3855 |
|
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|
3856 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
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|
3857 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
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3858 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
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|
3859 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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|
3860 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
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|
3861 |
|
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|
3862 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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|
3863 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
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3864 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
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|
3865 f.flush() |
|
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|
3866 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
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|
3867 stderr = subprocess.STDOUT).split('\n') |
|
118
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|
3868 |
|
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test_bitbucket_issue_55
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diff
changeset
|
3869 |
|
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test_bitbucket_issue_55
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|
3870 def test_bitbucket_issue_55(self): |
|
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|
3871 def Run(modify, query): |
|
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|
3872 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
3873 |
|
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|
3874 operation = 'modify' if modify else 'anonymize' |
|
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|
3875 |
|
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|
3876 self.assertRaises(Exception, lambda: DoPost( |
|
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3877 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
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|
3878 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
3879 |
|
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|
3880 query["Force"] = True |
|
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3881 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
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|
3882 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
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|
3883 DoDelete(_REMOTE, a) |
|
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|
3884 |
|
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changeset
|
3885 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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changeset
|
3886 |
|
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|
3887 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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|
3888 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
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changeset
|
3889 |
|
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diff
changeset
|
3890 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
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changeset
|
3891 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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|
3892 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
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|
3893 |
|
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|
3894 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
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|
3895 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
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|
3896 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
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changeset
|
3897 |
|
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diff
changeset
|
3898 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
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changeset
|
3899 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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|
3900 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
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|
3901 |
|
120
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diff
changeset
|
3902 |
|
fce08afe6b2d
test_bitbucket_issue_56
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diff
changeset
|
3903 def test_bitbucket_issue_56(self): |
|
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diff
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|
3904 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
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diff
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|
3905 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
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|
3906 # is set to "false" (default value). |
| 319 | 3907 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
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|
3908 |
|
fce08afe6b2d
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diff
changeset
|
3909 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
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parents:
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|
3910 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
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diff
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|
3911 '-k', '0008,0052=PATIENT', |
|
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test_bitbucket_issue_56
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parents:
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diff
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|
3912 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
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|
3913 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
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|
3914 self.assertEqual(expected, len(patientNames)) |
|
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parents:
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changeset
|
3915 |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
changeset
|
3916 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
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|
3917 'CaseSensitive' : False, |
|
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diff
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|
3918 'Query' : { 'PatientName' : name }}) |
|
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diff
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|
3919 self.assertEqual(expected, len(a)) |
|
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|
3920 |
|
fce08afe6b2d
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diff
changeset
|
3921 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
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|
3922 'CaseSensitive' : True, |
|
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|
3923 'Query' : { 'PatientName' : name }}) |
|
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|
3924 self.assertEqual(expectedSensitive, len(a)) |
|
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|
3925 |
|
fce08afe6b2d
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diff
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|
3926 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
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|
3927 |
|
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diff
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|
3928 # WildcardConstraint |
|
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|
3929 Check('TeSt*', 1, 0) |
|
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|
3930 Check('TeSt-a*', 0, 0) |
|
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changeset
|
3931 Check('TeSt-É*', 1, 0) |
|
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changeset
|
3932 Check('TeSt-é*', 1, 0) |
|
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changeset
|
3933 Check('Test-é*', 1, 1) |
|
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|
3934 |
|
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|
3935 # ListConstraint |
|
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changeset
|
3936 Check('Test-éüäöò\\nope', 1, 1) |
|
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changeset
|
3937 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
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changeset
|
3938 |
|
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|
3939 # ValueConstraint |
|
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changeset
|
3940 Check('Test-éüäöò', 1, 1) |
|
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changeset
|
3941 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
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|
3942 |
| 125 | 3943 |
| 3944 def test_gbk_alias(self): | |
| 3945 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 3946 # This test fails on Orthanc <= 1.3.0 | |
| 3947 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 3948 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 3949 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 3950 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 3951 |
| 3952 | |
| 3953 def test_long_tag(self): | |
| 3954 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 3955 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 3956 | |
| 3957 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3958 self.assertTrue('0018,1020' in tags) | |
| 3959 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 3960 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 3961 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 3962 | |
| 3963 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 3964 self.assertTrue('0018,1020' in tags) | |
| 3965 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 3966 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 3967 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 3968 | |
| 3969 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 3970 self.assertTrue('SoftwareVersions' in tags) | |
| 3971 self.assertEqual(None, tags['SoftwareVersions']) | |
| 3972 self.assertTrue('HeartRate' in tags) | |
| 3973 self.assertEqual(474, int(tags['HeartRate'])) | |
| 3974 | |
| 3975 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 3976 self.assertTrue('SoftwareVersions' in tags) | |
| 3977 self.assertEqual(None, tags['SoftwareVersions']) | |
| 3978 | |
| 3979 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 3980 self.assertTrue('SoftwareVersions' in tags) | |
| 3981 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 3982 | |
| 3983 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 3984 self.assertTrue('SoftwareVersions' in tags) | |
| 3985 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 3986 | |
| 3987 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 3988 self.assertEqual(1, len(tags)) | |
| 3989 self.assertTrue(i in tags.keys()) | |
| 3990 self.assertTrue('0018,1020' in tags[i]) | |
| 3991 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 3992 | |
| 3993 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 3994 self.assertEqual(1, len(tags)) | |
| 3995 self.assertTrue(i in tags.keys()) | |
| 3996 self.assertTrue('0018,1020' in tags[i]) | |
| 3997 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 3998 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 3999 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4000 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4001 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4002 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4003 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4004 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4005 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4006 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4007 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4008 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4009 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4010 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4011 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4012 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4013 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4014 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4015 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4016 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4017 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4018 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4019 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4020 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4021 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4022 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4023 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4024 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4025 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4026 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4027 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4028 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4029 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4030 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4031 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4032 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4033 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4034 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4035 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4036 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4037 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4038 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4039 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4040 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4041 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4042 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4043 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4044 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4045 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4046 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4047 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4048 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4049 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4050 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4051 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4052 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4053 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4054 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4055 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4056 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4057 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4058 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4059 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4060 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4061 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4062 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4063 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4064 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4065 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4066 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4067 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4068 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4069 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4070 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4071 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4072 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4073 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4074 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4075 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4076 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4077 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4078 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4079 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4080 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4081 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4082 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4083 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4084 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4085 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4086 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4087 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4088 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4089 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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parents:
130
diff
changeset
|
4090 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4091 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4092 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4093 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4094 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4095 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4096 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4097 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4098 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4099 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4100 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4101 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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parents:
130
diff
changeset
|
4102 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4103 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4104 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4105 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4106 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4107 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4108 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4109 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4110 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4111 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4112 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4113 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4114 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4115 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4116 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4117 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4118 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4119 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4120 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4121 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4122 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4123 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4124 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4125 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4126 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4127 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4128 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4129 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4130 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4131 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4132 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4133 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4134 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4135 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4136 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4137 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4138 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4139 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4140 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4141 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4142 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4143 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4144 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4145 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4146 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4147 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4148 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4149 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4150 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4151 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4152 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4153 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4154 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4155 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4156 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4157 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4158 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4159 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4160 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4161 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4162 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4163 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4164 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4165 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4166 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4167 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4168 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4169 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4170 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4171 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4172 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4173 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4174 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4175 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4176 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4177 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4178 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4179 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4180 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4181 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4182 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
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|
4183 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
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changeset
|
4184 |
|
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test_anonymize_relationships_3
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diff
changeset
|
4185 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
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test_anonymize_relationships_3
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diff
changeset
|
4186 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
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changeset
|
4187 self.assertEqual(str(content1), str(content2)) |
|
141
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test_bitbucket_issue_94
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138
diff
changeset
|
4188 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4189 |
|
5de178abe4d8
test_bitbucket_issue_94
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changeset
|
4190 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4191 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4192 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
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test_bitbucket_issue_94
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diff
changeset
|
4193 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
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test_bitbucket_issue_94
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diff
changeset
|
4194 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4195 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
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test_bitbucket_issue_94
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diff
changeset
|
4196 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4197 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
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test_bitbucket_issue_94
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diff
changeset
|
4198 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
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diff
changeset
|
4199 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4200 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
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test_bitbucket_issue_94
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diff
changeset
|
4201 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4202 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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changeset
|
4203 self.assertEqual(1, len(a)) |
|
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test_bitbucket_issue_94
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changeset
|
4204 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4205 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
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diff
changeset
|
4206 self.assertEqual(1, len(b)) |
|
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test_bitbucket_issue_94
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parents:
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diff
changeset
|
4207 |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
138
diff
changeset
|
4208 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
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parents:
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diff
changeset
|
4209 self.assertEqual(1, len(c)) |
|
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test_bitbucket_issue_94
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changeset
|
4210 |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4211 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
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diff
changeset
|
4212 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
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142
diff
changeset
|
4213 |
|
28d50ffac07d
test_metadata_origin
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142
diff
changeset
|
4214 |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4215 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4216 # Upload using the REST API |
|
144
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diff
changeset
|
4217 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
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diff
changeset
|
4218 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4219 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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diff
changeset
|
4220 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4221 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4222 |
| 4223 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4224 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4225 | |
|
144
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testing metadata?expand
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diff
changeset
|
4226 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4227 self.assertEqual('RestApi', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4228 self.assertEqual('', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4229 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
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parents:
143
diff
changeset
|
4230 self.assertFalse('CalledAET' in m) |
| 315 | 4231 self.assertTrue('HttpUsername' in m) |
| 4232 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
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testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4233 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4234 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4235 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4236 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4237 self.assertTrue('ReceptionDate' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4238 |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4239 DoDelete(_REMOTE, '/instances/%s' % i) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4240 |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4241 # Upload using the DICOM protocol |
|
28d50ffac07d
test_metadata_origin
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parents:
142
diff
changeset
|
4242 subprocess.check_call([ FindExecutable('storescu'), |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4243 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4244 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4245 '-xw' ]) # Propose JPEG2000 |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4246 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4247 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4248 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4249 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4250 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4251 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4252 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4253 self.assertEqual('DicomProtocol', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4254 self.assertEqual('STORESCU', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4255 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4256 self.assertEqual('ANY-SCP', m['CalledAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4257 self.assertFalse('HttpUsername' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4258 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4259 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4260 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4261 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4262 self.assertTrue('ReceptionDate' in m) |
| 147 | 4263 |
| 4264 | |
| 4265 def test_lua_deadlock(self): | |
| 4266 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4267 # is with the lua script I'm using for conversion of images to | |
| 4268 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4269 # instance appears to be stored and then everything just | |
| 4270 # halts, ie Orthanc wont respond to anything after that." | |
| 4271 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4272 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4273 |
| 4274 subprocess.check_call([ FindExecutable('storescu'), | |
| 4275 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4276 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4277 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4278 ]) | |
| 4279 | |
| 4280 instances = DoGet(_REMOTE, '/instances') | |
| 4281 self.assertEqual(2, len(instances)) | |
| 4282 | |
| 4283 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4284 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4285 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4286 self.assertEqual(t1, t2); |
|
154
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4287 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4288 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4289 def test_find_group_length(self): |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4290 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4291 # one of the Generic Group Length tags (*, 0x0000) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4292 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4a533d003080
test_find_group_length
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parents:
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diff
changeset
|
4293 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4294 self.assertFalse('UnableToProcess' in result) |
|
4a533d003080
test_find_group_length
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147
diff
changeset
|
4295 self.assertFalse('E:' in result) |
|
179
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diff
changeset
|
4296 |
|
8a2dd77d4035
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177
diff
changeset
|
4297 |
|
8a2dd77d4035
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diff
changeset
|
4298 def test_split(self): |
|
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diff
changeset
|
4299 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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diff
changeset
|
4300 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
254
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diff
changeset
|
4301 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
|
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test generation of sopinstanceuid in split/merge
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diff
changeset
|
4302 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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diff
changeset
|
4303 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
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diff
changeset
|
4304 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
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diff
changeset
|
4305 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
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177
diff
changeset
|
4306 |
|
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diff
changeset
|
4307 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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|
4308 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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changeset
|
4309 |
|
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|
4310 info = DoGet(_REMOTE, '/studies/%s' % study) |
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|
4311 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4312 |
|
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|
4313 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
4314 (_REMOTE, '/studies/%s/split' % study, { |
|
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|
4315 'Series' : [ t2 ], |
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|
4316 'Replace' : { 'PatientName' : 'Hello' }, |
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|
4317 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4318 'KeepSource' : False, |
| 4319 'Asynchronous' : True | |
|
179
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|
4320 })) |
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changeset
|
4321 |
|
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|
4322 self.assertNotEqual(None, job) |
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changeset
|
4323 |
|
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|
4324 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4325 self.assertEqual(2, len(studies)) |
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changeset
|
4326 |
|
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changeset
|
4327 series = set(DoGet(_REMOTE, '/series')) |
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|
4328 self.assertEqual(2, len(series)) |
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|
4329 self.assertTrue(t1 in series) |
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|
4330 |
|
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|
4331 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4332 self.assertTrue(study in studies) |
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|
4333 self.assertTrue(study2 in studies) |
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changeset
|
4334 |
|
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changeset
|
4335 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4336 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4337 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4338 |
|
254
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|
4339 sopInstanceUids = set() |
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|
4340 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4341 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4342 |
|
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|
4343 self.assertTrue(knee1Sop in sopInstanceUids) |
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|
4344 |
|
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|
4345 # Fails if Orthanc <= 1.5.7 |
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|
4346 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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|
4347 |
|
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|
4348 # One original instance is kept, another one is added because of the split |
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|
4349 self.assertEqual(2, len(sopInstanceUids)) |
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|
4350 |
|
179
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|
4351 |
|
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changeset
|
4352 def test_merge(self): |
|
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|
4353 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
254
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|
4354 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
4355 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4356 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
179
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diff
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|
4357 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
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diff
changeset
|
4358 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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changeset
|
4359 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
|
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changeset
|
4360 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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diff
changeset
|
4361 |
|
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diff
changeset
|
4362 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
changeset
|
4363 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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diff
changeset
|
4364 |
|
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diff
changeset
|
4365 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
4366 (_REMOTE, '/studies/%s/merge' % knee, { |
|
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diff
changeset
|
4367 'Resources' : [ brainix ], |
| 181 | 4368 'KeepSource' : True, |
| 4369 'Synchronous' : False | |
|
179
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diff
changeset
|
4370 })) |
|
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diff
changeset
|
4371 |
|
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diff
changeset
|
4372 self.assertNotEqual(None, job) |
|
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177
diff
changeset
|
4373 |
|
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177
diff
changeset
|
4374 studies = set(DoGet(_REMOTE, '/studies')) |
|
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diff
changeset
|
4375 self.assertEqual(2, len(studies)) |
|
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diff
changeset
|
4376 self.assertTrue(knee in studies) |
|
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diff
changeset
|
4377 self.assertTrue(brainix in studies) |
|
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diff
changeset
|
4378 |
|
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diff
changeset
|
4379 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
|
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diff
changeset
|
4380 self.assertTrue(t1 in series) |
|
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diff
changeset
|
4381 series.remove(t1) |
|
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diff
changeset
|
4382 self.assertEqual(1, len(series)) |
|
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diff
changeset
|
4383 |
|
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diff
changeset
|
4384 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
|
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diff
changeset
|
4385 self.assertEqual(1, len(instances)) |
|
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diff
changeset
|
4386 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
|
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diff
changeset
|
4387 |
|
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diff
changeset
|
4388 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
|
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diff
changeset
|
4389 self.assertEqual(1, len(instances)) |
|
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diff
changeset
|
4390 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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diff
changeset
|
4391 |
|
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diff
changeset
|
4392 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
|
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changeset
|
4393 self.assertEqual(1, len(instances)) |
|
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diff
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|
4394 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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diff
changeset
|
4395 |
|
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diff
changeset
|
4396 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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changeset
|
4397 |
|
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changeset
|
4398 for key in tags['PatientMainDicomTags']: |
|
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changeset
|
4399 self.assertEqual(a[key], merged[key]) |
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|
4400 if (key in b and key != 'PatientSex'): |
|
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|
4401 self.assertNotEqual(a[key], b[key]) |
|
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changeset
|
4402 |
|
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changeset
|
4403 for key in tags['MainDicomTags']: |
|
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changeset
|
4404 # Not in the patient/study module |
|
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|
4405 if (not key in [ 'InstitutionName', |
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changeset
|
4406 'RequestingPhysician', |
|
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|
4407 'RequestedProcedureDescription', ]): |
|
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|
4408 self.assertEqual(a[key], merged[key]) |
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|
4409 if (key in b): |
|
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|
4410 self.assertNotEqual(a[key], b[key]) |
|
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|
4411 |
|
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changeset
|
4412 sopInstanceUids = set() |
|
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|
4413 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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changeset
|
4414 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4415 |
|
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|
4416 self.assertTrue(kneeSop in sopInstanceUids) |
|
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|
4417 self.assertTrue(brainixSop in sopInstanceUids) |
|
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4418 |
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4419 # Fails if Orthanc <= 1.5.7 |
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4420 # The 2 original instances are kept, another one is added because of the merge |
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4421 self.assertEqual(3, len(sopInstanceUids)) |
|
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4422 |
| 187 | 4423 |
| 4424 def test_async_archive(self): | |
| 4425 # Testing the asynchronous generation of archives/medias (new | |
| 4426 # in Orthanc 1.4.3) | |
| 4427 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4428 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4429 | |
| 4430 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4431 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4432 | |
| 4433 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 4434 (_REMOTE, '/studies/%s/archive' % kneeT1, { | |
| 4435 'Synchronous' : False | |
| 4436 })) | |
| 4437 | |
| 4438 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4439 self.assertEqual(1, len(z.namelist())) | |
| 4440 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4441 | |
|
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4442 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4443 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4444 self.assertEqual(1, info['Content']['InstancesCount']) |
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4445 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4446 |
| 187 | 4447 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 4448 (_REMOTE, '/studies/%s/media' % kneeT1, { | |
| 4449 'Synchronous' : False | |
| 4450 })) | |
| 4451 | |
| 4452 # The archive from the first job has been replaced by the | |
| 4453 # archive from second job (as MediaArchiveSize == 1) | |
| 4454 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4455 | |
| 4456 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4457 self.assertEqual(2, len(z.namelist())) | |
| 4458 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4459 | |
|
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4460 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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4461 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4462 self.assertEqual(1, info['Content']['InstancesCount']) |
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4463 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4464 |
| 187 | 4465 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4466 (_REMOTE, '/tools/create-archive', { | |
| 4467 'Synchronous' : False, | |
| 4468 'Resources' : [ kneeT1, kneeT2 ], | |
| 4469 })) | |
| 4470 | |
| 4471 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4472 self.assertEqual(2, len(z.namelist())) | |
| 4473 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4474 | |
|
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4475 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4476 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4477 self.assertEqual(2, info['Content']['InstancesCount']) |
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4478 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4479 |
| 187 | 4480 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4481 (_REMOTE, '/tools/create-media', { | |
| 4482 'Synchronous' : False, | |
| 4483 'Resources' : [ kneeT1, kneeT2 ], | |
| 4484 })) | |
| 4485 | |
| 4486 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4487 self.assertEqual(3, len(z.namelist())) | |
| 4488 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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4489 |
|
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4490 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4491 self.assertEqual(2, info['Content']['InstancesCount']) |
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4492 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4493 |
| 187 | 4494 |
|
188
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4495 def test_queries_hierarchy(self): |
|
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4496 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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4497 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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4498 |
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4499 tags = { |
|
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4500 'NumberOfPatientRelatedInstances' : '', |
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4501 'NumberOfPatientRelatedSeries' : '', |
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4502 'NumberOfPatientRelatedStudies' : '', |
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4503 'NumberOfStudyRelatedInstances' : '', |
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4504 'NumberOfStudyRelatedSeries' : '', |
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4505 'NumberOfSeriesRelatedInstances' : '', |
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4506 } |
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4507 |
|
189
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|
4508 tags2 = copy.copy(tags) |
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4509 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
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4510 |
|
188
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4511 patient = DoPost(_REMOTE, '/modalities/self/query', { |
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4512 'Level' : 'Patient', |
|
189
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4513 'Query' : tags2 |
|
188
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4514 }) ['ID'] |
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4515 |
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4516 study = DoPost(_REMOTE, '/modalities/self/query', { |
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4517 'Level' : 'Study', |
|
189
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4518 'Query' : tags2 |
|
188
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4519 }) ['ID'] |
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4520 |
|
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4521 series = DoPost(_REMOTE, '/modalities/self/query', { |
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4522 'Level' : 'Series', |
|
189
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4523 'Query' : tags2 |
|
188
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4524 }) ['ID'] |
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4525 |
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4526 instance = DoPost(_REMOTE, '/modalities/self/query', { |
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4527 'Level' : 'Instance', |
|
189
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4528 'Query' : tags2 |
|
188
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4529 }) ['ID'] |
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4530 |
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4531 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
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4532 self.assertEqual(1, len(p)) |
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4533 self.assertEqual('887', p[0]['PatientID']) |
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4534 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
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4535 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
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4536 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
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4537 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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4538 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
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4539 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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4540 |
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4541 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
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4542 self.assertEqual(1, len(p)) |
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4543 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
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4544 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
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4545 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
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4546 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4547 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
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4548 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4549 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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4550 |
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4551 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
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4552 self.assertEqual(1, len(p)) |
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4553 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
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4554 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
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4555 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4556 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
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|
4557 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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4558 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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4559 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
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|
4560 |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4561 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4562 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4563 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4564 |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4565 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4566 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
4567 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4568 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4569 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4570 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4571 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4572 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4573 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4574 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4575 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4576 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4577 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4578 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4579 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4580 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4581 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4582 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4583 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4584 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4585 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4586 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4587 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4588 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4589 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4590 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4591 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4592 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4593 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4594 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4595 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4596 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4597 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4598 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4599 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4600 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4601 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4602 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4603 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4604 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4605 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4606 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4607 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4608 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4609 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4610 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4611 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4612 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4613 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4614 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4615 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4616 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4617 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4618 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4619 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4620 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4621 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4622 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4623 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4624 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4625 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4626 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4627 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4628 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4629 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4630 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4631 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4632 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4633 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
4634 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4635 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4636 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4637 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4638 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4639 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4640 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4641 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4642 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4643 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4644 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4645 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4646 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4647 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4648 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4649 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
4650 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4651 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4652 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4653 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4654 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4655 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4656 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4657 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4658 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4659 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4660 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4661 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4662 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4663 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4664 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4665 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4666 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4667 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4668 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4669 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4670 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4671 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4672 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4673 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4674 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4675 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4676 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4677 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4678 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4679 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4680 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4681 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4682 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4683 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4684 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4685 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4686 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4687 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4688 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4689 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4690 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4691 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4692 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4693 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4694 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4695 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4696 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4697 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4698 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4699 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4700 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4701 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4702 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4703 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4704 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4705 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4706 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4707 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4708 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4709 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4710 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4711 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4712 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4713 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4714 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4715 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4716 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4717 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4718 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4719 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4720 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4721 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4722 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4723 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4724 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4725 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4726 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4727 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4728 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4729 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4730 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4731 z = GetArchive(_REMOTE, '/patients/%s/media' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4732 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4733 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4734 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4735 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4736 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4737 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4738 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4739 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4740 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4741 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4742 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4743 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4744 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4745 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4746 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4747 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4748 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4749 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4750 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4751 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4752 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4753 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4754 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4755 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4756 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4757 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4758 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4759 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4760 |
|
2444c9a7c422
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4761 # In single-valued constraints, the patient sex must be set |
|
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4762 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
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|
4763 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
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4764 self.assertEqual(0, CountRestResults('F')) |
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4765 self.assertEqual(0, CountRestResults('M')) |
|
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4766 |
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4767 # Empty constraints are only used to ask the actual value of |
|
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4768 # the tag to be added to the *answer*. The tag should not used |
|
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4769 # as a filter in such a situation. |
|
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4770 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
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|
4771 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
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4772 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
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4773 |
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4774 |
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4775 def test_rest_modalities_in_study(self): |
|
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4776 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
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4777 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
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4778 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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4779 |
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4780 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4781 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
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4782 self.assertEqual(0, len(a)) |
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4783 |
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4784 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4785 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
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4786 self.assertEqual(1, len(a)) |
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4787 |
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4788 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4789 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
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4790 self.assertEqual(1, len(a)) |
| 211 | 4791 |
| 4792 | |
| 4793 def test_series_status(self): | |
| 4794 def HasCompletedInChanges(): | |
| 4795 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 4796 if c['ChangeType'] == 'CompletedSeries': | |
| 4797 return True; | |
| 4798 | |
| 4799 return False | |
| 4800 | |
| 4801 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 4802 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 4803 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4804 self.assertFalse(HasCompletedInChanges()) | |
| 4805 | |
| 4806 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 4807 | |
| 4808 for i in range(3): | |
| 4809 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 4810 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4811 self.assertFalse(HasCompletedInChanges()) | |
| 4812 | |
| 4813 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 4814 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4815 self.assertTrue(HasCompletedInChanges()) | |
| 4816 | |
| 4817 DoDelete(_REMOTE, '/changes') | |
| 4818 self.assertFalse(HasCompletedInChanges()) | |
| 4819 | |
| 4820 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 4821 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4822 self.assertFalse(HasCompletedInChanges()) | |
| 4823 | |
| 215 | 4824 |
| 4825 def test_dicomweb(self): | |
| 4826 def Compare(dicom, reference): | |
| 4827 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4828 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 4829 headers = { 'Accept' : 'application/dicom+json' }) | |
| 4830 with open(GetDatabasePath(reference), 'rb') as c: | |
| 4831 d = json.load(c) | |
| 220 | 4832 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 4833 |
| 4834 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 4835 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 4836 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 4837 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 4838 |
| 4839 | |
| 4840 def test_issue_95_encodings(self): | |
| 319 | 4841 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 4842 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 4843 | |
| 4844 # Very useful tool: "file2" from package "file-kanji" | |
| 4845 | |
| 4846 def GetPatientName(dicom): | |
| 4847 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4848 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4849 return j['PatientName'] | |
| 4850 | |
| 4851 def ComparePatientName(name, dicom): | |
| 4852 self.assertEqual(name, GetPatientName(dicom)) | |
| 4853 | |
| 4854 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4855 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 4856 | |
| 4857 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 4858 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 4859 | |
| 4860 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 4861 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 4862 | |
| 4863 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 4864 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 4865 | |
| 4866 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 4867 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 4868 | |
| 4869 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4870 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 4871 | |
| 4872 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 4873 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 4874 | |
| 4875 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 4876 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 4877 | |
| 4878 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 4879 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 4880 # Linux console into Emacs automatically reverse the string | |
| 4881 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 4882 | |
| 4883 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 4884 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 4885 # characters by default, but copy/paste works with Emacs | |
| 4886 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 4887 | |
| 4888 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 4889 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 4890 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 4891 # remainer. Orthanc only takes into consideration the first | |
| 4892 # codepage: This is a limitation. | |
| 4893 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 4894 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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|
4895 |
|
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diff
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|
4896 |
|
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diff
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|
4897 def test_findscu_missing_tags(self): |
|
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diff
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|
4898 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
|
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diff
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|
4899 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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diff
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|
4900 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
|
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diff
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|
4901 |
|
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diff
changeset
|
4902 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
|
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diff
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|
4903 |
|
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217
diff
changeset
|
4904 # We have 2 instances... |
|
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217
diff
changeset
|
4905 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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diff
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|
4906 self.assertEqual(2, len(patientNames)) |
|
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diff
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|
4907 self.assertEqual('KNIX', patientNames[0]) |
|
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diff
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|
4908 self.assertEqual('KNIX', patientNames[1]) |
|
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diff
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|
4909 |
|
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diff
changeset
|
4910 # ...but only 1 value for the "Rows" tag |
|
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diff
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|
4911 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
|
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diff
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|
4912 self.assertEqual(1, len(rows)) |
|
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diff
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|
4913 self.assertEqual('512', rows[0]) |
|
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4914 |
|
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4915 |
|
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|
4916 |
|
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|
4917 def test_bitbucket_issue_131(self): |
|
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|
4918 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
|
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|
4919 # StudyInstanceUID in it's database." |
| 319 | 4920 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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4921 |
|
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diff
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|
4922 # Insert 2 instances, with the same StudyInstanceUID, but with |
|
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|
4923 # different patient IDs. Orthanc will create 2 distincts |
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|
4924 # patients, and the hierarchy of resources above the two |
|
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|
4925 # instances will be fully disjoint. |
|
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|
4926 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
|
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|
4927 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
|
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4928 |
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|
4929 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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4930 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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4931 |
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|
4932 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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4933 'Level' : 'Study', |
|
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|
4934 'Query' : {"PatientID": "A" }})['ID'] |
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4935 |
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|
4936 # 1 study is matched |
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|
4937 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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4938 |
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|
4939 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4940 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4941 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4942 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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4943 |
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4944 # The two studies are matched, as we made the request at the |
|
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4945 # Study level, thus the shared StudyInstanceUID is used as the key |
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4946 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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4947 |
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4948 |
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4949 # Match the 2 studies |
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4950 a = DoPost(_REMOTE, '/modalities/self/query', { |
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4951 'Level' : 'Study', |
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4952 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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4953 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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4954 DropOrthanc(_LOCAL) |
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4955 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4956 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4957 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4958 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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4959 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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4960 |
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|
4961 |
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4962 # Same test, at the patient level => only 1 instance is transfered |
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4963 a = DoPost(_REMOTE, '/modalities/self/query', { |
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4964 'Level' : 'Patient', |
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4965 'Query' : {"PatientID": "A" }})['ID'] |
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4966 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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|
4967 DropOrthanc(_LOCAL) |
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|
4968 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4969 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4970 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4971 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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|
4972 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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|
4973 |
|
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diff
changeset
|
4974 |
|
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diff
changeset
|
4975 # Same test, at the series level => only 1 instance is transfered |
|
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|
4976 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
4977 'Level' : 'Series', |
|
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|
4978 'Query' : {"PatientID": "A" }})['ID'] |
|
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|
4979 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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diff
changeset
|
4980 DropOrthanc(_LOCAL) |
|
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diff
changeset
|
4981 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4982 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4983 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4984 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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|
4985 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
4986 |
|
233
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diff
changeset
|
4987 |
|
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diff
changeset
|
4988 def test_bitbucket_issue_136(self): |
|
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changeset
|
4989 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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diff
changeset
|
4990 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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|
4991 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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changeset
|
4992 self.assertEqual(1, len(patientNames)) |
|
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changeset
|
4993 self.assertEqual('John Doe', patientNames[0]) |
|
234
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diff
changeset
|
4994 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
4995 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
4996 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
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diff
changeset
|
4997 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
93cd4fdd4a67
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diff
changeset
|
4998 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
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diff
changeset
|
4999 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
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233
diff
changeset
|
5000 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
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diff
changeset
|
5001 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5002 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
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test_anonymize_relationships_4
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diff
changeset
|
5003 'application/json')['ID'] |
|
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233
diff
changeset
|
5004 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
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diff
changeset
|
5005 self.assertEqual(2, len(series)) |
|
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diff
changeset
|
5006 |
|
93cd4fdd4a67
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233
diff
changeset
|
5007 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
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233
diff
changeset
|
5008 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5009 self.assertEqual(1, len(cr)) |
|
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diff
changeset
|
5010 self.assertEqual(1, len(pr)) |
|
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diff
changeset
|
5011 self.assertEqual(1, len(cr[0]['Instances'])) |
|
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diff
changeset
|
5012 self.assertEqual(1, len(pr[0]['Instances'])) |
|
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diff
changeset
|
5013 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5014 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
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diff
changeset
|
5015 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
93cd4fdd4a67
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diff
changeset
|
5016 |
|
93cd4fdd4a67
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diff
changeset
|
5017 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
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diff
changeset
|
5018 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
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diff
changeset
|
5019 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
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diff
changeset
|
5020 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
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diff
changeset
|
5021 |
|
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diff
changeset
|
5022 # This fails on Orthanc <= 1.5.6 |
|
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diff
changeset
|
5023 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
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diff
changeset
|
5024 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
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diff
changeset
|
5025 |
|
9929e4af2b7a
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diff
changeset
|
5026 |
|
255
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diff
changeset
|
5027 def test_anonymize_relationships_5(self): |
|
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diff
changeset
|
5028 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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diff
changeset
|
5029 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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diff
changeset
|
5030 oStudyId = ct1['ParentStudy'] |
|
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diff
changeset
|
5031 oCtInstanceId = ct1['ID'] |
|
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diff
changeset
|
5032 oRtInstanceId = rt1['ID'] |
|
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diff
changeset
|
5033 |
|
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diff
changeset
|
5034 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
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diff
changeset
|
5035 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
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diff
changeset
|
5036 |
|
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diff
changeset
|
5037 # first validate the relationships in the source data |
|
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diff
changeset
|
5038 oStudyUID = oCtTags['StudyInstanceUID'] |
|
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diff
changeset
|
5039 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5040 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5041 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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diff
changeset
|
5042 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5043 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5044 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
|
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diff
changeset
|
5045 |
|
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diff
changeset
|
5046 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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diff
changeset
|
5047 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
|
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diff
changeset
|
5048 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
|
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5049 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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5050 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5051 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5052 |
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5053 ### anonymize |
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5054 |
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5055 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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5056 'application/json')['ID'] |
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5057 |
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5058 ### validate |
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5059 |
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5060 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
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5061 self.assertEqual(2, len(aSeries)) |
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5062 |
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5063 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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5064 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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5065 aCtInstanceId = aCt[0]['Instances'][0] |
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5066 aRtInstanceId = aRt[0]['Instances'][0] |
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5067 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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5068 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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5069 |
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5070 # now validate the relationships in the anonymized data |
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5071 aStudyUID = aCtTags['StudyInstanceUID'] |
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5072 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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5073 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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5074 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5075 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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5076 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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5077 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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5078 |
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5079 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5080 # make sure all UIDs have been updated |
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5081 self.assertNotEqual(oStudyUID, aStudyUID) |
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5082 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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5083 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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5084 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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5085 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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5086 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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5087 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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5088 |
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5089 # validate the relationships |
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5090 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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5091 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5092 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5093 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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5094 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5095 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5096 |
| 256 | 5097 def test_anonymize_relationships_5b(self): |
| 5098 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5099 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5100 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5101 oStudyId = ct1['ParentStudy'] | |
| 5102 oCtInstanceId = ct1['ID'] | |
| 5103 oRtInstanceId = rt1['ID'] | |
| 5104 | |
| 5105 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5106 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5107 | |
| 5108 ### anonymize while forcing the StudyInstanceUID | |
| 5109 | |
| 5110 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5111 'application/json')['ID'] | |
| 5112 | |
| 5113 ### validate | |
| 5114 | |
| 5115 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5116 self.assertEqual(2, len(aSeries)) | |
| 5117 | |
| 5118 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5119 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5120 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5121 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5122 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5123 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5124 | |
| 5125 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5126 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5127 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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5128 |
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5129 |
|
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5130 def test_bitbucket_issue_140(self): |
| 266 | 5131 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5132 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5133 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
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5134 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
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5135 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
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5136 |
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5137 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5138 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5139 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
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5140 }, 'application/json') ['ID'] |
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5141 |
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5142 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
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5143 self.assertEqual(1, len(instances)) |
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5144 |
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5145 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
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5146 t = tags['4321,1012'] |
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5147 self.assertEqual('String', t['Type']) |
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5148 self.assertEqual('RadioButton3', t['Name']) |
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5149 self.assertEqual('RadioLogic', t['PrivateCreator']) |
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5150 self.assertEqual('jklmopq', t['Value']) |
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5151 |
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5152 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
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5153 t = tags['4321,1012'] |
| 327 | 5154 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
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5155 self.assertEqual('RadioButton3', t['Name']) |
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5156 self.assertEqual('RadioLogic', t['PrivateCreator']) |
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5157 self.assertEqual('aaabbbccc', t['Value']) |
|
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5158 |
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5159 |
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5160 def test_find_normalize(self): |
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5161 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
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5162 |
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5163 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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5164 |
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5165 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5166 'Level' : 'Instance', |
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5167 'Query' : { 'Rows' : '42' } |
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5168 }) ['ID'] |
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5169 |
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5170 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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5171 self.assertEqual(1, len(b)) |
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5172 self.assertFalse('Rows' in b[0]) |
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5173 |
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5174 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5175 'Level' : 'Instance', |
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5176 'Query' : { 'Rows' : '42' }, |
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5177 'Normalize' : False |
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5178 }) ['ID'] |
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5179 |
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5180 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
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5181 self.assertEqual(0, len(b)) |
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5182 |
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5183 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5184 'Level' : 'Instance', |
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|
5185 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5186 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5187 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5188 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5189 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5190 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5191 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5192 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5193 |
| 5194 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5195 'Level' : 'Instance', | |
| 5196 'Query' : { 'Rows' : '' }, | |
| 5197 'Normalize' : False | |
| 5198 }) ['ID'] | |
| 5199 | |
| 5200 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5201 self.assertEqual(1, len(b)) | |
| 5202 self.assertTrue('Rows' in b[0]) | |
| 5203 self.assertEqual('512', b[0]['Rows']) | |
| 5204 | |
| 5205 self.assertRaises(Exception, lambda: DoPost( | |
| 5206 _REMOTE, '/modalities/self/query', { | |
| 5207 'Level' : 'Instance', | |
| 5208 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5209 'Normalize' : False | |
| 5210 })) | |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5211 |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5212 |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5213 def test_bitbucket_issue_141(self): |
| 319 | 5214 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5215 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5216 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5217 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5218 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5219 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5220 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5221 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5222 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5223 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5224 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5225 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5226 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5227 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5228 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5229 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5230 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5231 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5232 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5233 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5234 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5235 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5236 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5237 |
| 5238 | |
| 5239 def test_log_level(self): | |
| 319 | 5240 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5241 original = DoGet(_REMOTE, '/tools/log-level') |
| 5242 | |
| 5243 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5244 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5245 DoGet(_REMOTE, '/system') | |
| 5246 | |
| 5247 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5248 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5249 DoGet(_REMOTE, '/system') | |
| 5250 | |
| 5251 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5252 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5253 DoGet(_REMOTE, '/system') | |
| 5254 | |
| 5255 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5256 | |
| 5257 # Switch back to the original log level | |
| 5258 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5259 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5260 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5261 def test_upload_compressed(self): |
| 265 | 5262 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5263 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5264 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5265 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5266 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5267 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5268 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5269 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5270 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5271 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5272 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5273 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5274 |
| 5275 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5276 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5277 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5278 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5279 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5280 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5281 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5282 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5283 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5284 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5285 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5286 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5287 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5288 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5289 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5290 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5291 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5292 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5293 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5294 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5295 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5296 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5297 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5298 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5299 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5300 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5301 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5302 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5303 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5304 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5305 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5306 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5307 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5308 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5309 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5310 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5311 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5312 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5313 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5314 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5315 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5316 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5317 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5318 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5319 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5320 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5321 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5322 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5323 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5324 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5325 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5326 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5327 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5328 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5329 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5330 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5331 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5332 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5333 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5334 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5335 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5336 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5337 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5338 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5339 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5340 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5341 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5342 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5343 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5344 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5345 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5346 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5347 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5348 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5349 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5350 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5351 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5352 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5353 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5354 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5355 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5356 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5357 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5358 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5359 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5360 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5361 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5362 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5363 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5364 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5365 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5366 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5367 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5368 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5369 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5370 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5371 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5372 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5373 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5374 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5375 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5376 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5377 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5378 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5379 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5380 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5381 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5382 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5383 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5384 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5385 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5386 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5387 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5388 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5389 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5390 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5391 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5392 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5393 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5394 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5395 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5396 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5397 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5398 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5399 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5400 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5401 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5402 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5403 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5404 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5405 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5406 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5407 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5408 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5409 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5410 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5411 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5412 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5413 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5414 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5415 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5416 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5417 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5418 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5419 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5420 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5421 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5422 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5423 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5424 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5425 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5426 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5427 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5428 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5429 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5430 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5431 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5432 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5433 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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5434 'Level' : 'Series', |
|
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5435 'Query' : { |
|
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5436 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
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5437 }, |
|
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5438 'Normalize' : normalize, |
|
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5439 })) |
|
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5440 self.assertEqual(0, CountAnswers({ |
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5441 'Level' : 'Series', |
|
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5442 'Query' : { |
|
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5443 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
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5444 }, |
|
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5445 'Normalize' : normalize, |
|
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5446 })) |
|
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5447 |
|
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5448 self.assertEqual(1, CountAnswers({ |
|
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5449 'Level' : 'Study', |
|
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5450 'Query' : { |
|
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5451 'ProtocolName' : '' # Universal matching |
|
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5452 }, |
|
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5453 'Normalize' : normalize, |
|
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5454 })) |
|
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|
5455 |
|
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|
5456 |
|
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5457 ## |
|
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5458 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
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5459 ## |
|
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5460 |
|
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5461 for level in [ 'Study', 'Series' ] : |
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5462 for normalize in [ True, False ]: |
|
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5463 self.assertEqual(1, CountAnswers({ |
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5464 'Level' : level, |
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5465 'Query' : { |
|
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5466 'StudyInstanceUID' : '' # Universal matching |
|
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5467 }, |
|
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5468 'Normalize' : normalize, |
|
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5469 })) |
|
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5470 self.assertEqual(0, CountAnswers({ |
|
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5471 'Level' : level, |
|
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5472 'Query' : { |
|
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5473 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
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5474 }, |
|
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|
5475 'Normalize' : normalize, |
|
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5476 })) |
|
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|
5477 self.assertEqual(1, CountAnswers({ |
|
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5478 'Level' : level, |
|
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5479 'Query' : { |
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5480 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
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5481 }, |
|
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5482 'Normalize' : normalize, |
|
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5483 })) |
|
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5484 |
| 269 | 5485 # Wildcard matching is not allowed for this VR |
|
263
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5486 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5487 self.assertRaises(Exception, lambda: CountAnswers({ |
|
263
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5488 'Level' : level, |
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5489 'Query' : { |
| 269 | 5490 'StudyInstanceUID' : '*' |
|
263
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5491 }, |
|
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5492 'Normalize' : normalize, |
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5493 })) |
| 265 | 5494 |
| 5495 | |
| 5496 def test_rendered(self): | |
| 5497 # New in Orthanc 1.6.0 | |
| 5498 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5499 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5500 self.assertEqual("RGB", im.mode) | |
| 5501 self.assertEqual(41, im.size[0]) | |
| 5502 self.assertEqual(41, im.size[1]) | |
| 5503 | |
| 5504 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5505 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5506 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5507 | |
| 5508 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5509 self.assertEqual("RGB", im.mode) | |
| 5510 self.assertEqual(10, im.size[0]) | |
| 5511 self.assertEqual(10, im.size[1]) | |
| 5512 | |
| 5513 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5514 self.assertEqual("RGB", im.mode) | |
| 5515 self.assertEqual(10, im.size[0]) | |
| 5516 self.assertEqual(10, im.size[1]) | |
| 5517 | |
| 5518 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5519 self.assertEqual("RGB", im.mode) | |
| 5520 self.assertEqual(128, im.size[0]) | |
| 5521 self.assertEqual(128, im.size[1]) | |
| 5522 | |
| 5523 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5524 self.assertEqual("RGB", im.mode) | |
| 5525 self.assertEqual(10, im.size[0]) | |
| 5526 self.assertEqual(10, im.size[1]) | |
| 5527 | |
| 5528 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5529 self.assertEqual("RGB", im.mode) | |
| 5530 self.assertEqual(10, im.size[0]) | |
| 5531 self.assertEqual(10, im.size[1]) | |
| 5532 | |
| 5533 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5534 self.assertEqual("RGB", im.mode) | |
| 5535 self.assertEqual(5, im.size[0]) | |
| 5536 self.assertEqual(5, im.size[1]) | |
| 5537 | |
| 5538 | |
| 5539 # Grayscale image | |
| 5540 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5541 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5542 self.assertEqual("L", im.mode) | |
| 5543 self.assertEqual(288, im.size[0]) | |
| 5544 self.assertEqual(288, im.size[1]) | |
| 5545 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5546 | |
| 5547 # Those are the original windowing parameters that are written | |
| 5548 # inside the DICOM file | |
| 5549 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5550 self.assertEqual("L", im2.mode) | |
| 5551 self.assertEqual(288, im2.size[0]) | |
| 5552 self.assertEqual(288, im2.size[1]) | |
| 5553 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5554 | |
| 5555 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5556 self.assertEqual("L", im.mode) | |
| 5557 self.assertEqual(512, im.size[0]) | |
| 5558 self.assertEqual(512, im.size[1]) | |
| 5559 | |
| 5560 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5561 self.assertEqual("L", im.mode) | |
| 5562 self.assertEqual(10, im.size[0]) | |
| 5563 self.assertEqual(10, im.size[1]) | |
| 5564 | |
| 5565 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5566 self.assertEqual("L", im.mode) | |
| 5567 self.assertEqual(10, im.size[0]) | |
| 5568 self.assertEqual(10, im.size[1]) | |
| 5569 | |
| 5570 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5571 self.assertEqual("L", im.mode) | |
| 5572 self.assertEqual(1, im.size[0]) | |
| 5573 self.assertEqual(1, im.size[1]) | |
| 5574 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5575 | |
| 5576 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5577 self.assertEqual("L", im.mode) | |
| 5578 self.assertEqual(1, im.size[0]) | |
| 5579 self.assertEqual(1, im.size[1]) | |
| 5580 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5581 | |
| 5582 | |
| 5583 # Test monochrome 1 | |
| 5584 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5585 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5586 self.assertEqual("L", im.mode) | |
| 5587 self.assertEqual(2010, im.size[0]) | |
| 5588 self.assertEqual(2446, im.size[1]) | |
| 5589 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5590 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5591 self.assertEqual("L", im.mode) | |
| 5592 self.assertEqual(20, im.size[0]) | |
| 5593 self.assertEqual(24, im.size[1]) | |
| 5594 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5595 self.assertEqual("L", im.mode) | |
| 5596 self.assertEqual(20, im.size[0]) | |
| 5597 self.assertEqual(24, im.size[1]) | |
| 5598 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5599 self.assertEqual("L", im.mode) | |
| 5600 self.assertEqual(10, im.size[0]) | |
| 5601 self.assertEqual(12, im.size[1]) | |
| 5602 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5603 self.assertEqual("L", im.mode) | |
| 5604 self.assertEqual(20, im.size[0]) | |
| 5605 self.assertEqual(24, im.size[1]) | |
|
268
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5606 |
|
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|
5607 |
|
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5608 def test_bitbucket_issue_154(self): |
|
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5609 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5610 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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|
5611 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
|
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|
5612 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5613 |
|
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|
5614 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
|
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|
5615 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
|
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5616 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
|
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|
5617 |
|
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|
5618 # C-FIND is working on list of UIDs |
|
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|
5619 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
|
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|
5620 '-k', 'StudyInstanceUID=%s' % study, |
|
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|
5621 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
|
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|
5622 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
|
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|
5623 self.assertEqual(2, len(series)) |
|
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|
5624 self.assertTrue(series1 in series) |
|
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5625 self.assertTrue(series2 in series) |
|
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5626 |
|
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5627 # Individual retrieval is working in Orthanc < 1.6.0 |
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5628 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5629 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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5630 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5631 '-k', 'StudyInstanceUID=%s' % study, |
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5632 '-k', 'SeriesInstanceUID=%s' % series1, |
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5633 ]))) |
|
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5634 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5635 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5636 '-k', 'StudyInstanceUID=%s' % study, |
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5637 '-k', 'SeriesInstanceUID=%s' % series2, |
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5638 ]))) |
|
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5639 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5640 |
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5641 DropOrthanc(_LOCAL) |
|
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5642 |
|
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5643 # But list matching is working only in Orthanc >= 1.6.0 |
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5644 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5645 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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|
5646 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5647 '-k', 'StudyInstanceUID=%s' % study, |
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5648 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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5649 ]))) |
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5650 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5651 |
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5652 |
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5653 def test_storage_commitment_api(self): |
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5654 # Storage commitment is available since Orthanc 1.6.0 |
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5655 |
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5656 def WaitTransaction(uid): |
|
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5657 while True: |
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5658 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5659 if s['Status'] != 'Pending': |
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5660 return s |
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5661 else: |
|
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5662 time.sleep(0.01) |
|
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5663 |
| 281 | 5664 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5665 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5666 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5667 |
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5668 # Against self |
| 281 | 5669 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5670 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5671 }) ['ID'] | |
|
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5672 self.assertTrue(transaction.startswith('2.25.')) |
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5673 |
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5674 result = WaitTransaction(transaction) |
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5675 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5676 self.assertEqual('Success', result['Status']) |
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5677 self.assertEqual(1, len(result['Success'])) |
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5678 self.assertEqual(0, len(result['Failures'])) |
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5679 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5680 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5681 |
| 281 | 5682 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5683 "DicomInstances" : [ | |
| 5684 { 'SOPClassUID' : sopClassUid, | |
| 5685 'SOPInstanceUID' : sopInstanceUid }, | |
| 5686 ], | |
| 5687 }) | |
| 5688 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5689 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5690 | |
| 5691 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5692 "Resources" : [ | |
| 5693 instance['ID'], | |
| 5694 instance['ParentSeries'], | |
| 5695 instance['ParentStudy'], | |
| 5696 instance['ParentPatient'], | |
| 5697 ] | |
| 5698 }) | |
|
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|
5699 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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|
5700 self.assertEqual(result, WaitTransaction(transaction)) |
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|
5701 |
|
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|
5702 |
| 281 | 5703 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5704 "DicomInstances" : [ | |
| 5705 [ 'nope', 'nope2' ], | |
| 5706 [ sopClassUid, sopInstanceUid ], | |
| 5707 ], | |
| 5708 }) ['ID'] | |
|
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|
5709 self.assertTrue(transaction.startswith('2.25.')) |
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|
5710 |
|
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|
5711 result = WaitTransaction(transaction) |
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|
5712 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5713 self.assertEqual('Failure', result['Status']) |
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|
5714 self.assertEqual(1, len(result['Success'])) |
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|
5715 self.assertEqual(1, len(result['Failures'])) |
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|
5716 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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|
5717 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5718 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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|
5719 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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|
5720 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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|
5721 |
|
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|
5722 # Cannot remove items from a failed storage commitment transaction |
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|
5723 self.assertRaises(Exception, lambda: |
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|
5724 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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|
5725 |
|
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|
5726 |
|
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|
5727 # Against Orthanc 0.8.6, that does not support storage commitment |
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|
5728 self.assertRaises(Exception, lambda: |
| 281 | 5729 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
| 5730 "DicomInstances" : [ | |
| 5731 [ sopClassUid, sopInstanceUid ], | |
| 5732 ] | |
| 5733 })) | |
|
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5734 |
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|
5735 |
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|
5736 |
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|
5737 def test_storage_commitment_store(self): |
|
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5738 # Storage commitment is available since Orthanc 1.6.0 |
|
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|
5739 |
|
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|
5740 def WaitTransaction(uid): |
|
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|
5741 while True: |
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|
5742 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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|
5743 if s['Status'] != 'Pending': |
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|
5744 return s |
|
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|
5745 else: |
|
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|
5746 time.sleep(0.01) |
|
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|
5747 |
|
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|
5748 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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5749 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
5750 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5751 |
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5752 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
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5753 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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5754 'Resources' : [ i ], |
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5755 'StorageCommitment' : True, |
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5756 })) |
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5757 |
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5758 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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5759 'Resources' : [ i ], |
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5760 'StorageCommitment' : False, |
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5761 }) |
|
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269
diff
changeset
|
5762 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5763 |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5764 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5765 'Resources' : [ i ], |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5766 'StorageCommitment' : True, |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5767 }) |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5768 |
|
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5769 transaction = j['StorageCommitmentTransactionUID'] |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
5770 self.assertTrue(transaction.startswith('2.25.')) |
|
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5771 |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5772 result = WaitTransaction(transaction) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
5773 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
5774 self.assertEqual('Success', result['Status']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
5775 self.assertEqual(1, len(result['Success'])) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5776 self.assertEqual(0, len(result['Failures'])) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5777 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
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279
diff
changeset
|
5778 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5779 result['Success'][0]['SOPInstanceUID']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5780 |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5781 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5782 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5783 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5784 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5785 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5786 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5787 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5788 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5789 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5790 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5791 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5792 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5793 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5794 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5795 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5796 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5797 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5798 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5799 answer['SOPClassUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5800 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5801 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5802 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5803 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5804 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5805 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5806 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5807 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5808 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5809 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5810 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5811 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5812 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5813 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5814 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5815 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5816 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5817 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5818 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5819 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5820 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5821 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5822 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5823 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5824 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5825 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5826 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5827 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5828 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5829 # Export, with transcoding disabled => this fails |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5830 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5831 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5832 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
5833 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5834 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5835 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5836 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5837 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5838 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5839 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5840 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5841 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5842 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5843 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5844 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5845 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5846 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5847 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5848 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5849 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5850 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5851 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5852 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5853 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5854 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5855 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5856 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5857 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5858 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5859 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5860 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5861 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5862 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5863 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5864 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5865 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5866 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5867 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5868 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5869 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5870 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5871 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5872 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5873 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5874 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5875 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
5876 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5877 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5878 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5879 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5880 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5881 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5882 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5883 |
| 304 | 5884 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5885 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5886 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5887 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5888 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5889 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5890 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5891 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5892 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5893 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5894 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5895 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5896 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5897 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5898 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5899 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5900 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5901 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5902 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5903 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5904 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5905 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5906 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5907 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5908 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5909 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5910 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5911 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5912 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5913 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5914 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5915 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5916 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5917 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5918 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5919 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5920 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5921 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5922 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5923 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5924 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5925 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5926 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5927 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5928 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5929 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5930 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5931 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5932 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5933 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5934 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5935 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5936 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5937 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5938 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5939 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5940 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5941 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5942 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5943 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5944 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5945 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5946 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5947 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5948 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5949 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5950 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5951 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5952 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5953 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5954 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5955 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5956 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5957 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5958 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5959 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5960 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5961 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5962 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5963 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5964 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5965 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5966 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5967 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5968 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5969 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5970 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5971 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5972 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5973 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5974 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5975 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5976 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5977 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5978 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5979 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5980 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5981 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5982 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5983 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5984 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5985 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5986 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5987 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5988 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5989 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5990 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5991 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5992 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5993 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5994 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5995 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5996 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5997 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5998 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5999 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6000 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6001 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6002 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6003 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6004 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6005 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6006 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6007 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6008 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6009 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6010 |
| 308 | 6011 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6012 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6013 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6014 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6015 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6016 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6017 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6018 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6019 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6020 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6021 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6022 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6023 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6024 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6025 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6026 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6027 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6028 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6029 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6030 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6031 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6032 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6033 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6034 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6035 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6036 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6037 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6038 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6039 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6040 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6041 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6042 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6043 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6044 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6045 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6046 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6047 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6048 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6049 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6050 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6051 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6052 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6053 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6054 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6055 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6056 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6057 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6058 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6059 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6060 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6061 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6062 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6063 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6064 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6065 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6066 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6067 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6068 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6069 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6070 '1.2.840.10008.1.2.2', |
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6071 '1.2.840.10008.1.2.4.50', |
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6072 '1.2.840.10008.1.2.4.51', |
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6073 '1.2.840.10008.1.2.4.57', |
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6074 '1.2.840.10008.1.2.4.70', |
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6075 ] |
|
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6076 |
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6077 if HasGdcmPlugin(_REMOTE): |
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6078 SYNTAXES = SYNTAXES + [ |
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6079 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
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6080 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
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6081 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
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6082 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
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6083 ] |
|
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6084 |
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|
6085 for syntax in SYNTAXES: |
|
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6086 body = { |
|
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6087 'Resources' : [ i ], |
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6088 } |
|
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|
6089 |
|
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6090 if syntax != '1.2.840.10008.1.2.1': |
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6091 body['Transcode'] = syntax |
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6092 |
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6093 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6094 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6095 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
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6096 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6097 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
6098 self.assertEqual(syntax, GetTransferSyntax( |
|
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6099 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
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|
6100 |
|
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|
6101 DropOrthanc(_LOCAL) |
| 308 | 6102 |
| 6103 | |
| 295 | 6104 def test_getscu(self): |
| 307 | 6105 def CleanTarget(): |
| 6106 if os.path.isdir('/tmp/GETSCU'): | |
| 6107 shutil.rmtree('/tmp/GETSCU') | |
| 6108 os.makedirs('/tmp/GETSCU') | |
| 6109 | |
|
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6110 env = {} |
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|
6111 if _DOCKER: |
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6112 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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6113 # and running in a GNU/Linux distribution running DCMTK |
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6114 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
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6115 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
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6116 |
| 295 | 6117 # no transcoding required |
| 307 | 6118 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6119 | |
| 6120 CleanTarget() | |
| 295 | 6121 |
|
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|
6122 subprocess.check_call([ |
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|
6123 FindExecutable('getscu'), |
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|
6124 _REMOTE['Server'], |
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|
6125 str(_REMOTE['DicomPort']), |
|
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|
6126 '-aec', 'ORTHANC', |
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|
6127 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6128 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
6129 '-k', '0008,0052=STUDY', |
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|
6130 '--output-directory', '/tmp/GETSCU/' |
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|
6131 ], env = env) |
| 295 | 6132 |
| 311 | 6133 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6134 self.assertTrue(os.path.isfile(f1)) | |
| 6135 with open(f1, 'rb') as f: | |
| 6136 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6137 | |
| 307 | 6138 CleanTarget() |
| 295 | 6139 |
| 6140 # transcoding required | |
| 311 | 6141 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6142 |
| 6143 subprocess.check_call([ | |
| 6144 FindExecutable('getscu'), | |
| 6145 _REMOTE['Server'], | |
| 6146 str(_REMOTE['DicomPort']), | |
| 6147 '-aec', 'ORTHANC', | |
| 6148 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6149 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6150 '-k', '0008,0052=STUDY', |
| 6151 '--output-directory', '/tmp/GETSCU/' | |
| 6152 ], env = env) | |
| 6153 | |
| 311 | 6154 self.assertTrue(os.path.isfile(f1)) |
| 6155 with open(f1, 'rb') as f: | |
| 6156 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6157 | |
| 6158 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6159 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6160 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6161 self.assertTrue(os.path.isfile(f2)) | |
| 6162 with open(f2, 'rb') as f: | |
| 6163 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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|
6164 |
|
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|
6165 |
|
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|
6166 def test_findscu_truncation(self): |
|
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|
6167 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
|
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|
6168 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
|
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|
6169 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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|
6170 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
6171 |
|
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|
6172 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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|
6173 |
|
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|
6174 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
|
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|
6175 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6176 self.assertEqual(2, len(result)) |
|
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|
6177 |
|
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|
6178 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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|
6179 # study, leading to a string of 249 characters |
|
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|
6180 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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|
6181 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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|
6182 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6183 self.assertEqual(1, len(result)) |
|
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|
6184 |
|
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|
6185 # The "StudyInstanceUID" is set as a list of 6 times the same |
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6186 # study, leading to a string of 299 characters. In Orthanc <= |
|
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6187 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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6188 # == 256, and is thus wiped out by C-FIND SCP. As a |
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6189 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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6190 # "StudyInstanceUID" and returns all the available |
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6191 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
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6192 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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6193 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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6194 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6195 self.assertEqual(1, len(result)) |
|
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|
6196 |
|
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|
6197 |
|
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|
6198 def test_store_compressed(self): |
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|
6199 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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6200 dicom = f.read() |
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|
6201 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
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|
6202 sourceSize = len(dicom) |
|
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6203 |
|
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6204 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
6205 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
6206 |
|
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|
6207 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
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6208 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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6209 _REMOTE, '/peers/peer/store', { |
|
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6210 'Resources' : [ i ], |
|
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6211 'Synchronous' : False, |
|
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6212 })) |
|
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6213 |
|
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6214 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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6215 self.assertFalse(job['Content']['Compress']) |
|
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6216 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
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6217 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
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6218 |
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6219 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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6220 DropOrthanc(_LOCAL) |
|
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6221 |
|
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6222 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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6223 # Not supported by Orthanc 0.8.6 => failure |
|
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6224 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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6225 'Resources' : [ i ], |
|
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6226 'Compress' : True, |
|
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|
6227 })) |
|
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6228 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6229 |
|
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6230 # Sending to the tested remote server, with compression: OK |
|
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|
6231 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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6232 _REMOTE, '/peers/self/store', { |
|
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6233 'Resources' : [ i ], |
|
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6234 'Compress' : True, |
|
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6235 'Synchronous' : False, |
|
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|
6236 })) |
|
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|
6237 |
|
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|
6238 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
6239 self.assertTrue(job['Content']['Compress']) |
|
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|
6240 |
|
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6241 # Compression must have divided the size of the sent data at least twice |
|
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6242 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6243 |
| 6244 | |
| 6245 def test_move_ambra(self): | |
| 6246 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6247 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6248 | |
| 6249 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6250 | |
| 6251 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6252 '--study', | |
| 6253 '-k', 'StudyInstanceUID=' | |
| 6254 ]))) | |
| 6255 | |
| 6256 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6257 '--study', | |
| 6258 '-k', 'AccessionNumber=', | |
| 6259 ]))) | |
| 6260 | |
| 6261 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6262 '--study', | |
| 6263 '-k', 'AccessionNumber=', | |
| 6264 '-k', 'StudyInstanceUID=' | |
| 6265 ]))) | |
| 6266 | |
| 6267 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6268 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6269 '--study', | |
| 6270 '-k', 'AccessionNumber=CT16000988', | |
| 6271 '-k', 'StudyInstanceUID=', | |
| 6272 ]))) | |
| 6273 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6274 DropOrthanc(_LOCAL) | |
| 6275 | |
| 6276 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6277 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6278 '--study', | |
| 6279 '-k', 'AccessionNumber=CT16000988', | |
| 6280 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6281 ]))) | |
| 6282 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6283 DropOrthanc(_LOCAL) | |
| 6284 | |
| 6285 # This fails on Orthanc <= 1.7.3 | |
| 6286 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6287 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6288 '--study', | |
| 6289 '-k', 'AccessionNumber=', | |
| 6290 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6291 ]))) | |
| 6292 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6293 DropOrthanc(_LOCAL) | |
|
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|
6294 |
|
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|
6295 |
|
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|
6296 def test_decode_elscint(self): |
|
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|
6297 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
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|
6298 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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6299 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
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|
6300 |
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|
6301 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
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|
6302 self.assertEqual("L", im.mode) |
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6303 self.assertEqual(512, im.size[0]) |
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6304 self.assertEqual(512, im.size[1]) |
|
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|
6305 |
|
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changeset
|
6306 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
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|
6307 self.assertEqual("L", im.mode) |
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|
6308 self.assertEqual(512, im.size[0]) |
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|
6309 self.assertEqual(512, im.size[1]) |
|
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|
6310 |
|
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changeset
|
6311 # The two tests below fail on Orthanc <= 1.7.3 |
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|
6312 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
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|
6313 self.assertEqual(512 * 512 * 2, len(raw)) |
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|
6314 |
|
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changeset
|
6315 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
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|
6316 self.assertEqual(512 * 512 * 2, len(raw)) |
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|
6317 |
|
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6318 |
|
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|
6319 def test_rest_modalities_in_study_2(self): |
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6320 # Problem reported by Alain Mazy on 2020-09-15 |
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|
6321 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
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|
6322 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
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|
6323 |
|
335
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|
6324 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
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|
6325 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
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|
6326 self.assertEqual(1, len(modalitiesInStudy)) |
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|
6327 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
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|
6328 |
|
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|
6329 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
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|
6330 # The empty string '' corresponds to universal matching. |
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|
6331 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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6332 |
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|
6333 if i in [ 'UX', 'UX\\MR' ]: |
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|
6334 expected = 0 |
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6335 else: |
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|
6336 expected = 1 |
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|
6337 |
|
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|
6338 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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|
6339 'Query' : { 'ModalitiesInStudy' : i }}) |
|
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|
6340 self.assertEqual(expected, len(a)) |
|
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|
6341 |
|
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changeset
|
6342 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
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|
6343 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6344 self.assertEqual(expected, len(studyInstanceUid)) |
|
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6345 |
|
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|
6346 |
|
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|
6347 def test_webdav(self): |
|
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6348 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
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|
6349 |
|
342
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changeset
|
6350 for suffix in [ '', '/' ]: |
|
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|
6351 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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diff
changeset
|
6352 self.assertEqual(1, len(f)) |
|
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diff
changeset
|
6353 self.assertTrue('/webdav/' in f.keys()) |
|
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diff
changeset
|
6354 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
6355 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6356 |
|
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341
diff
changeset
|
6357 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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diff
changeset
|
6358 self.assertEqual(6, len(f)) |
|
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diff
changeset
|
6359 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
6360 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6361 |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6362 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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diff
changeset
|
6363 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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diff
changeset
|
6364 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
6365 |
|
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more tests of webdav
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341
diff
changeset
|
6366 for depth in [ 0, 1 ]: |
|
bf8369ea3ff1
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341
diff
changeset
|
6367 for suffix2 in [ '', '/' ]: |
|
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341
diff
changeset
|
6368 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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341
diff
changeset
|
6369 |
|
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341
diff
changeset
|
6370 if i == 'uploads': |
|
bf8369ea3ff1
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diff
changeset
|
6371 # Empty folders might still exist in "/uploads/" |
|
bf8369ea3ff1
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341
diff
changeset
|
6372 self.assertTrue('/webdav/uploads/' in g) |
|
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341
diff
changeset
|
6373 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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parents:
341
diff
changeset
|
6374 for j in g.items(): |
|
bf8369ea3ff1
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diff
changeset
|
6375 self.assertTrue(g.items()[0][1]['folder']) |
|
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parents:
341
diff
changeset
|
6376 else: |
|
bf8369ea3ff1
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341
diff
changeset
|
6377 self.assertEqual(1, len(g)) |
|
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341
diff
changeset
|
6378 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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parents:
341
diff
changeset
|
6379 self.assertTrue(g.items()[0][1]['folder']) |
|
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more tests of webdav
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parents:
341
diff
changeset
|
6380 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6381 |
|
342
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parents:
341
diff
changeset
|
6382 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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341
diff
changeset
|
6383 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
6384 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
6385 |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6386 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
bf8369ea3ff1
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parents:
341
diff
changeset
|
6387 time.sleep(0.01) |
|
bf8369ea3ff1
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341
diff
changeset
|
6388 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6389 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6390 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6391 def test_log_categories(self): |
| 350 | 6392 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6393 |
| 350 | 6394 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6395 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6396 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6397 |
| 350 | 6398 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6399 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6400 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6401 |
| 350 | 6402 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6403 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6404 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6405 |
| 350 | 6406 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6407 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6408 # Switch back to the original log level |
| 350 | 6409 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6410 | |
| 6411 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6412 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6413 |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6414 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6415 |
| 6416 | |
| 6417 def test_upload_zip(self): | |
| 6418 f = StringIO() | |
| 6419 with zipfile.ZipFile(f, 'w') as z: | |
| 6420 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6421 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6422 c = g.read() | |
| 6423 z.writestr('hello/world/dicom1.dcm', c) | |
| 6424 z.writestr('hello/world/dicom2.dcm', c) | |
| 6425 | |
| 6426 f.seek(0) | |
| 6427 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6428 | |
| 6429 self.assertEqual(2, len(i)) | |
| 6430 self.assertEqual(i[0], i[1]) | |
| 6431 self.assertEqual(6, len(i[0])) | |
| 6432 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 6433 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 6434 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 6435 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 6436 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 6437 | |
| 6438 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 6439 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6440 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6441 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6442 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6443 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6444 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
6445 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6446 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6447 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6448 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6449 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6450 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6451 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6452 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6453 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6454 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6455 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6456 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6457 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6458 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6459 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6460 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6461 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6462 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6463 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6464 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6465 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6466 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6467 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6468 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6469 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6470 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6471 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6472 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6473 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
6474 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
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diff
changeset
|
6475 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6476 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6477 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6478 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6479 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6480 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6481 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6482 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6483 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6484 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6485 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6486 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6487 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6488 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6489 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6490 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6491 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6492 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6493 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6494 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6495 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6496 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6497 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6498 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6499 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6500 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6501 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6502 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6503 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6504 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6505 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6506 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6507 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6508 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6509 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6510 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6511 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6512 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6513 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6514 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6515 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6516 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6517 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6518 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6519 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6520 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6521 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6522 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6523 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6524 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6525 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6526 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6527 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6528 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6529 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6530 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6531 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6532 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6533 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6534 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6535 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6536 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6537 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6538 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6539 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6540 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6541 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6542 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6543 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6544 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6545 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6546 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6547 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6548 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6549 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6550 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6551 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6552 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6553 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6554 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6555 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6556 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6557 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6558 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6559 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6560 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6561 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6562 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6563 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6564 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6565 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6566 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6567 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6568 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6569 self.assertEqual(3, len(peer)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6570 self.assertEqual(5, peer['DatabaseVersion']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6571 self.assertEqual('MyOrthanc', peer['Name']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
6572 self.assertEqual('0.8.6', peer['Version']) |
|
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|
6573 |
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|
6574 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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|
6575 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
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|
6576 |
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|
6577 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
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|
6578 # "ParentStudy", "ParentSeries" are not reported |
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|
6579 self.assertEqual(3, len(j)) |
|
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|
6580 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
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|
6581 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
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|
6582 self.assertEqual('Success', j['Status']) |
|
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6583 |
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|
6584 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
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|
6585 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 6586 |
| 6587 | |
| 6588 def test_cp246(self): | |
| 6589 # This fails on Orthanc <= 1.9.0 | |
| 6590 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 6591 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 6592 | |
| 6593 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 6594 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 6595 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 6596 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 6597 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 6598 | |
| 6599 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 6600 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 6601 | |
| 6602 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 6603 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 6604 | |
| 6605 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 6606 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 6607 | |
|
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diff
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|
6608 |
|
392
5cbcb4a83b41
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diff
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|
6609 def test_revisions_metadata(self): |
|
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diff
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|
6610 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
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|
6611 # was introduced in 1.9.2), or if configuration option |
|
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diff
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|
6612 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
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diff
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|
6613 # related to revisions mimic CouchDB: |
|
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|
6614 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
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diff
changeset
|
6615 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
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changeset
|
6616 |
|
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diff
changeset
|
6617 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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|
6618 self.assertEqual('200', headers['status']) |
|
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|
6619 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
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diff
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|
6620 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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changeset
|
6621 |
|
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diff
changeset
|
6622 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
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|
6623 'If-None-Match' : '"aaa"' |
|
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diff
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|
6624 }) |
|
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diff
changeset
|
6625 self.assertEqual('400', headers['status']) # Bad header format |
|
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diff
changeset
|
6626 |
|
eb87ec525b53
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394
diff
changeset
|
6627 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
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diff
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|
6628 'If-None-Match' : '"aaa-bbb"' |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6629 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
6630 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
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diff
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|
6631 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
6632 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
6633 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6634 }) |
|
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diff
changeset
|
6635 self.assertEqual('304', headers['status']) # Not modified |
|
397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6636 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
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diff
changeset
|
6637 self.assertEqual('', body) # Body must be empty on 304 status |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
6638 |
|
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diff
changeset
|
6639 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6640 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
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diff
changeset
|
6641 }) |
|
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diff
changeset
|
6642 self.assertEqual('200', headers['status']) |
|
397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6643 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6644 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6645 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
6646 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
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diff
changeset
|
6647 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6648 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6649 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6650 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
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diff
changeset
|
6651 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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diff
changeset
|
6652 |
|
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390
diff
changeset
|
6653 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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changeset
|
6654 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
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diff
changeset
|
6655 |
|
227d9a932467
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390
diff
changeset
|
6656 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
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diff
changeset
|
6657 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
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diff
changeset
|
6658 |
|
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diff
changeset
|
6659 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
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diff
changeset
|
6660 self.assertEqual('200', headers['status']) |
|
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diff
changeset
|
6661 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
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diff
changeset
|
6662 |
|
227d9a932467
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diff
changeset
|
6663 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
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changeset
|
6664 self.assertEqual('200', headers['status']) |
|
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changeset
|
6665 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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changeset
|
6666 self.assertEqual('hello', body) |
|
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diff
changeset
|
6667 |
|
227d9a932467
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diff
changeset
|
6668 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6669 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
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changeset
|
6670 }) |
|
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diff
changeset
|
6671 self.assertEqual('304', headers['status']) |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
6672 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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diff
changeset
|
6673 self.assertEqual('', body) |
|
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diff
changeset
|
6674 |
|
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diff
changeset
|
6675 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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changeset
|
6676 'If-None-Match' : '"1-tata"' |
|
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changeset
|
6677 }) |
|
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diff
changeset
|
6678 self.assertEqual('200', headers['status']) |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6679 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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diff
changeset
|
6680 self.assertEqual('hello', body) |
|
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diff
changeset
|
6681 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
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diff
changeset
|
6682 |
|
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diff
changeset
|
6683 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
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changeset
|
6684 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
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diff
changeset
|
6685 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6686 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6687 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6688 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6689 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6690 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6691 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6692 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6693 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6694 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6695 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6696 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6697 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6698 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6699 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6700 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6701 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6702 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6703 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6704 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6705 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6706 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6707 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6708 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6709 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6710 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6711 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6712 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6713 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6714 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6715 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6716 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6717 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6718 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6719 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6720 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6721 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6722 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6723 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6724 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6725 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6726 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6727 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6728 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6729 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6730 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6731 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6732 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6733 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6734 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6735 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6736 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6737 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6738 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6739 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6740 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6741 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6742 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6743 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6744 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6745 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6746 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6747 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6748 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6749 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6750 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6751 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6752 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6753 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6754 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6755 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6756 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6757 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6758 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6759 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6760 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6761 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6762 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6763 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6764 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6765 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6766 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6767 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6768 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6769 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6770 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6771 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6772 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6773 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6774 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6775 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6776 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6777 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6778 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6779 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6780 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6781 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6782 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6783 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6784 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6785 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6786 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6787 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6788 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6789 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6790 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6791 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6792 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6793 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6794 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6795 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6796 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6797 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6798 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6799 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6800 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6801 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6802 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6803 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6804 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6805 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6806 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6807 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6808 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6809 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6810 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6811 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6812 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6813 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6814 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6815 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6816 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6817 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6818 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6819 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6820 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6821 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6822 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6823 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6824 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6825 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6826 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6827 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6828 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6829 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6830 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6831 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6832 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6833 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6834 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6835 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6836 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6837 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6838 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6839 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6840 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6841 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6842 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6843 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6844 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6845 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6846 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6847 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6848 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6849 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6850 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6851 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6852 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6853 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6854 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6855 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6856 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6857 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6858 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6859 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6860 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6861 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6862 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6863 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6864 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6865 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6866 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6867 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6868 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6869 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6870 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6871 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6872 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6873 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6874 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6875 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6876 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6877 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6878 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6879 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6880 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6881 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6882 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6883 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6884 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6885 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6886 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6887 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6888 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6889 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6890 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6891 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6892 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6893 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6894 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6895 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6896 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6897 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6898 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6899 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6900 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6901 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6902 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6903 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6904 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6905 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6906 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6907 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6908 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6909 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6910 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6911 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6912 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6913 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6914 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6915 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6916 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6917 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6918 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6919 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6920 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6921 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6922 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6923 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6924 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6925 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6926 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6927 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6928 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6929 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6930 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6931 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6932 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6933 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6934 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6935 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6936 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6937 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6938 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6939 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6940 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6941 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6942 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6943 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6944 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6945 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6946 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6947 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6948 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6949 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6950 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6951 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6952 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6953 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6954 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6955 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6956 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6957 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6958 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6959 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6960 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6961 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6962 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6963 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6964 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6965 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6966 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6967 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6968 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6969 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6970 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6971 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6972 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6973 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6974 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6975 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6976 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6977 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6978 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6979 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6980 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6981 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6982 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6983 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6984 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6985 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6986 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6987 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6988 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6989 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6990 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6991 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6992 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6993 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6994 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6995 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6996 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6997 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
6998 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
6999 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7000 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7001 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7002 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7003 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7004 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7005 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7006 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7007 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7008 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7009 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7010 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7011 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7012 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7013 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7014 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7015 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7016 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7017 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7018 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7019 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7020 |
| 7021 | |
| 7022 def test_issue_146(self): | |
| 7023 # "Update Anonyization to 2019c" | |
| 7024 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7025 | |
| 7026 def GetTags(study, params): | |
| 7027 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7028 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7029 self.assertEqual(1, len(b)) | |
| 7030 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7031 | |
| 7032 | |
| 7033 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7034 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7035 | |
| 7036 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7037 | |
| 7038 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7039 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7040 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7041 tagsDefault = GetTags(study, {}) | |
| 7042 | |
| 420 | 7043 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7044 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7045 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7046 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7047 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7048 | |
| 7049 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7050 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7051 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7052 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7053 self.assertEqual('YES', t['0012,0062']) | |
| 7054 | |
| 7055 for t in [ tags2008 ]: | |
| 7056 self.assertEqual('20200101', t['0008,0020']) | |
| 7057 | |
| 7058 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7059 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7060 | |
| 7061 for t in [ tags2008, tags2017c ]: | |
| 7062 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7063 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7064 | |
| 7065 for t in [ tags2021b, tagsDefault ]: | |
| 7066 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7067 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7068 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7069 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7070 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7071 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7072 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7073 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7074 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7075 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7076 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7077 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7078 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7079 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7080 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7081 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7082 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7083 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7084 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7085 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7086 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7087 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7088 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7089 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7090 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7091 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7092 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7093 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7094 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7095 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7096 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7097 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7098 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7099 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7100 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7101 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7102 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7103 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7104 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7105 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7106 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7107 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7108 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7109 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7110 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7111 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7112 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7113 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7114 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7115 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7116 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7117 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7118 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7119 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7120 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7121 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7122 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7123 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7124 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7125 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7126 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7127 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7128 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7129 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7130 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7131 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7132 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7133 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7134 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7135 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7136 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7137 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7138 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7139 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7140 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7141 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7142 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7143 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7144 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7145 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7146 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7147 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7148 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7149 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7150 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7151 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7152 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7153 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7154 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7155 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7156 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7157 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7158 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7159 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7160 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7161 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7162 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7163 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7164 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7165 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7166 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7167 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7168 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7169 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7170 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7171 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7172 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7173 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7174 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7175 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7176 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7177 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7178 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7179 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7180 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7181 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7182 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7183 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7184 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7185 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7186 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7187 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7188 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7189 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7190 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7191 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7192 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7193 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7194 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7195 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7196 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7197 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7198 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7199 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7200 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7201 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7202 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7203 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7204 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7205 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7206 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7207 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7208 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7209 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7210 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7211 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7212 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7213 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7214 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7215 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7216 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7217 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7218 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7219 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7220 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7221 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7222 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7223 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7224 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7225 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7226 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7227 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7228 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7230 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7231 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7232 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7233 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7234 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7235 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7236 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7237 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7238 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7239 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7240 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7241 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7242 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7243 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7244 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7245 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7246 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7247 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7248 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7249 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7250 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7251 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7252 |
| 7253 | |
| 7254 def test_bulk_modify(self): | |
| 7255 # New in Orthanc 1.9.4 | |
| 7256 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7257 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7258 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7259 if expectedCount != None: |
| 7260 self.assertEqual(expectedCount, len(m)) | |
| 7261 return m | |
| 7262 | |
| 7263 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7264 series = DoGet(_REMOTE, '/series') [0] | |
| 7265 study = DoGet(_REMOTE, '/studies') [0] | |
| 7266 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7267 | |
| 7268 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7269 'Resources' : [ instance ] | |
| 7270 }) | |
| 7271 | |
| 7272 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7273 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7274 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7275 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7276 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7277 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7278 'Resources' : [ instance ] |
| 7279 }) | |
| 7280 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7281 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7282 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7283 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7284 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7285 |
| 7286 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7287 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7288 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7289 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7290 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7291 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7292 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7293 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7294 |
| 410 | 7295 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7296 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7297 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7298 | |
| 7299 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7300 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7301 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7302 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7303 | |
| 7304 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7305 'Resources' : [ knee1, brainix ] | |
| 7306 }) | |
| 7307 | |
| 7308 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7309 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7310 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7311 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7312 | |
| 7313 for i in GetModified(a, 'Instance', 2): | |
| 7314 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7315 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7316 | |
| 7317 b = GetModified(a, 'Series', 2) | |
| 7318 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7319 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7320 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7321 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7322 | |
| 7323 b = GetModified(a, 'Study', 2) | |
| 7324 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7325 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7326 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7327 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7328 | |
| 7329 b = GetModified(a, 'Patient', 2) | |
| 7330 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7331 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7332 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7333 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7334 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7335 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7336 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7337 }) |
| 410 | 7338 |
| 7339 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7340 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7341 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7342 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7343 self.assertEqual(4, len(sourceInstances)) | |
| 7344 self.assertEqual(4, len(sourceSeries)) | |
| 7345 self.assertEqual(3, len(sourceStudies)) | |
| 7346 self.assertEqual(3, len(sourcePatients)) | |
| 7347 | |
| 7348 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7349 'Resources' : [ knee1, brainix ] | |
| 7350 }) | |
| 7351 | |
| 7352 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7353 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7354 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7355 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7356 | |
| 7357 for i in GetModified(a, 'Instance', 2): | |
| 7358 self.assertFalse(i in sourceInstances) | |
| 7359 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7360 | |
| 7361 for i in GetModified(a, 'Series', 2): | |
| 7362 self.assertFalse(i in sourceSeries) | |
| 7363 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7364 | |
| 7365 for i in GetModified(a, 'Study', 2): | |
| 7366 self.assertFalse(i in sourceStudies) | |
| 7367 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7368 | |
| 7369 for i in GetModified(a, 'Patient', 2): | |
| 7370 self.assertFalse(i in sourcePatients) | |
| 7371 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7372 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7373 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7374 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7375 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7376 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7377 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7378 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7379 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7380 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7381 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7382 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7383 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7384 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7385 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7386 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7387 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7388 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7389 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7390 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7391 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7392 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7393 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7394 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7395 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7396 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7397 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7398 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7399 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7400 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7401 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7402 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7403 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7404 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7405 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7406 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7407 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7408 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7409 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7410 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7411 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7412 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7413 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7414 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7415 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7416 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7417 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7418 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7419 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7420 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7421 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7422 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7423 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7424 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7425 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7426 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7427 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7428 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7429 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7430 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7431 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7432 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7433 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7434 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7435 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7436 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7437 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7438 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7439 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7440 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7441 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7442 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7443 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7444 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7445 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7446 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7447 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7448 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7449 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7450 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7451 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7452 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7453 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7454 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7455 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7456 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7457 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7458 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7459 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7460 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7461 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7462 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7463 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7464 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7465 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7466 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7467 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7468 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7469 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7470 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7471 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7472 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7473 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7474 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7475 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7476 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7477 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7478 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7479 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7480 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7481 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7482 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7483 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7484 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7485 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7486 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7487 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7488 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7489 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7490 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7491 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7492 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7493 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7494 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7495 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7496 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7497 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7498 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7499 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7500 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7501 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7502 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7503 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7504 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7505 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7506 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7507 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7508 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7509 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7510 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7511 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7512 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7513 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7514 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7515 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7516 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7517 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7518 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7519 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7520 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7521 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7522 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7523 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7524 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7525 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7526 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7527 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7528 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7529 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7530 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7531 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7532 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7533 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7534 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7535 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7536 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7537 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7538 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7539 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7540 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7541 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7542 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7543 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7544 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7545 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7546 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7547 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7548 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7549 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7550 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7551 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7552 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7553 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7554 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7555 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7556 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7557 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7558 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7559 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7560 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7561 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7562 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7563 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7564 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7565 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7566 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7567 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7568 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7569 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7570 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7571 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7572 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7573 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7574 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7575 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7576 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7577 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7578 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7579 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7580 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7581 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7582 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7583 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7584 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7585 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7586 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7587 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7588 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7589 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7590 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7591 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7592 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7593 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7594 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7595 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7596 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7597 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7598 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7599 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 7600 |
| 7601 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 7602 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 7603 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 7604 | |
| 7605 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 7606 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 7607 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 7608 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 7609 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 7610 | |
| 7611 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 7612 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 7613 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 7614 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 7615 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 7616 | |
| 7617 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 7618 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 7619 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 7620 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 7621 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 7622 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7623 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7624 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7625 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7626 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7627 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7628 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7629 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7630 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7631 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7632 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7633 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7634 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7635 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7636 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7637 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7638 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7639 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7640 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7641 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7642 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7643 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7644 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7645 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7646 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7647 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7648 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7649 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7650 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7651 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7652 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7653 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7654 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7655 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7656 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7657 |
| 415 | 7658 |
| 7659 def test_bulk_content(self): | |
| 7660 # New in Orthanc 1.9.4 | |
| 7661 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 7662 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7663 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7664 | |
| 7665 brainixHierarchy = [ | |
| 7666 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 7667 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 7668 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 7669 brainix, | |
| 7670 ] | |
| 7671 | |
| 7672 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 7673 self.assertEqual(4, len(a)) | |
| 7674 b = map(lambda x: x['ID'], a) | |
| 7675 for i in range(4): | |
| 7676 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7677 self.assertTrue('Metadata' in a[i]) |
| 415 | 7678 |
| 7679 for (level, index) in [ | |
| 7680 ('Patient', 0), | |
| 7681 ('Study', 1), | |
| 7682 ('Series', 2), | |
| 7683 ('Instance', 3), | |
| 7684 ]: | |
| 7685 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 7686 'Level' : level }) | |
| 7687 self.assertEqual(1, len(a)) | |
| 7688 self.assertEqual(level, a[0]['Type']) | |
| 7689 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7690 self.assertTrue('Metadata' in a[0]) |
| 415 | 7691 |
| 7692 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7693 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7694 'Metadata' : False }) |
| 415 | 7695 self.assertEqual(1, len(a)) |
| 7696 self.assertEqual(level, a[0]['Type']) | |
| 7697 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7698 self.assertFalse('Metadata' in a[0]) |
| 415 | 7699 |
| 7700 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 7701 self.assertEqual(3, len(a)) | |
| 7702 for item in a: | |
| 7703 self.assertEqual('Instance', item['Type']) | |
| 7704 b = map(lambda x: x['ID'], a) | |
| 7705 self.assertTrue(knee1 in b) | |
| 7706 self.assertTrue(knee2 in b) | |
| 7707 self.assertTrue(brainix in b) | |
| 7708 | |
| 7709 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 7710 'Level' : 'Series' }) | |
| 7711 self.assertEqual(2, len(a)) | |
| 7712 for item in a: | |
| 7713 self.assertEqual('Series', item['Type']) | |
| 7714 b = map(lambda x: x['ID'], a) | |
| 7715 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 7716 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 7717 | |
| 7718 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7719 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7720 'Metadata' : False }) |
| 415 | 7721 self.assertEqual(1, len(a)) |
| 7722 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 7723 self.assertEqual('Study', a[0]['Type']) | |
| 7724 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7725 self.assertFalse('Metadata' in a[0]) |
| 415 | 7726 |
| 7727 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7728 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7729 'Metadata' : True }) |
| 415 | 7730 self.assertEqual(1, len(a)) |
| 7731 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 7732 self.assertEqual('Patient', a[0]['Type']) | |
| 7733 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7734 self.assertTrue('Metadata' in a[0]) |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7735 self.assertEqual(1, len(a[0]['Metadata'])) |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7736 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 7737 |
| 7738 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 7739 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 7740 'Level' : level }) | |
| 7741 self.assertEqual(2, len(a)) | |
| 7742 for item in a: | |
| 7743 self.assertEqual(level, item['Type']) | |
| 7744 b = map(lambda x: x['ID'], a) | |
| 7745 if level == 'Instance': | |
| 7746 self.assertTrue(knee1 in b) | |
| 7747 self.assertTrue(brainix in b) | |
| 7748 else: | |
| 7749 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 7750 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7751 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7752 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7753 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7754 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7755 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7756 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7757 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7758 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7759 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7760 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7761 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7762 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7763 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7764 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7765 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7766 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7767 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7768 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7769 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7770 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7771 |
| 417 | 7772 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 7773 'KeepSource' : False | |
| 7774 })) # Neither "Instances", nor "Series" | |
| 7775 | |
| 7776 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7777 'KeepSource' : False, | |
| 7778 'Instances' : [ ], | |
| 7779 'Series' : [ ] | |
| 7780 })) # Empty "Instances" and "Series" | |
| 7781 | |
| 7782 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7783 'Instances' : [ 'nope' ], | |
| 7784 'KeepSource' : False | |
| 7785 })) | |
| 7786 | |
| 7787 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7788 'Series' : [ 'nope' ], | |
| 7789 'KeepSource' : False | |
| 7790 })) | |
| 7791 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7792 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7793 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7794 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7795 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7796 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7797 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7798 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7799 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7800 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7801 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7802 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7803 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7804 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7805 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7806 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7807 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7808 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7809 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7810 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7811 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7812 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7813 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7814 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7815 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7816 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7817 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7818 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7819 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7820 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7821 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7822 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7823 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7824 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7825 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7826 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7827 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7828 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7829 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7830 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7831 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7832 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7833 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7834 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7835 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7836 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7837 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7838 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7839 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7840 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7841 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7842 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7843 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7844 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7845 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7846 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7847 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7848 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7849 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7850 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7851 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7852 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7853 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7854 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7855 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7856 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7857 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7858 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7859 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7860 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7861 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7862 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7863 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7864 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7865 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7866 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7867 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7868 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7869 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7870 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7871 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7872 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7873 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7874 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7875 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7876 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7877 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7878 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7879 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7880 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7881 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7882 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7883 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7884 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7885 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7886 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7887 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7888 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7889 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7890 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7891 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7892 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7893 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7894 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7895 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7896 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7897 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7898 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7899 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7900 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7901 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7902 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7903 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7904 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7905 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7906 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7907 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7908 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7909 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7910 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7911 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7912 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7913 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7914 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7915 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7916 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7917 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7918 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7919 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7920 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7921 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7922 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7923 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7924 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7925 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7926 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7927 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7928 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7929 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7930 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7931 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7932 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7933 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7934 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7935 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7936 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7937 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7938 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7939 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7940 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7941 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7942 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7943 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7944 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7945 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7946 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7947 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7948 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7949 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7950 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7951 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7952 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7953 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7954 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7955 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7956 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7957 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7958 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7959 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7960 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7961 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7962 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7963 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7964 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7965 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7966 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7967 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7968 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7969 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7970 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7971 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7972 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7973 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7974 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7975 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7976 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7977 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7978 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7979 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7980 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7981 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7982 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7983 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7984 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7985 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7986 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7987 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7988 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7989 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7990 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7991 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7992 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7993 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7994 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7995 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7996 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7997 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7998 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7999 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8000 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8001 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8002 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8003 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8004 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8005 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8006 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8007 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8008 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8009 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8010 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8011 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8012 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8013 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8014 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8015 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8016 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8017 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8018 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8019 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8020 |
| 8021 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8022 self.assertEqual(1, len(last)) | |
| 8023 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8024 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8025 |
| 8026 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8027 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8028 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8029 | |
| 8030 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8031 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8032 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8033 | |
| 8034 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8035 self.assertEqual(1, len(last)) | |
| 8036 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8037 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8038 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8039 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8040 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8041 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8042 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8043 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8044 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8045 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8046 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8047 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8048 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8049 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8050 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8051 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8052 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8053 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8054 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8055 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8056 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8057 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8058 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8059 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8060 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8061 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8062 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8063 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8064 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8065 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8066 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8067 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8068 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8069 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8070 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8071 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8072 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8073 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8074 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8075 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8076 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8077 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8078 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8079 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8080 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8081 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8082 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8083 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8084 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8085 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8086 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8087 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8088 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8089 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8090 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8091 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8092 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8093 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8094 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8095 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8096 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8097 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8098 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8099 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8100 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8101 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8102 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8103 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8104 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8105 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8106 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8107 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8108 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8109 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8110 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8111 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8112 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8113 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8114 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8115 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8116 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8117 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8118 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8119 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8120 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8121 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8122 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8123 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8124 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8125 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8126 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8127 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8128 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8129 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8130 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8131 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8132 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8133 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8134 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8135 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8136 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8137 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8138 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8139 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8140 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8141 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8142 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8143 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8144 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8145 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8146 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8147 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8148 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8149 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8150 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8151 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8152 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8153 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8154 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8155 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8156 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8157 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8158 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8159 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8160 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8161 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8162 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8163 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8164 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8165 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8166 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8167 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8168 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8169 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8170 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8171 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8172 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8173 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8174 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8175 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8176 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8177 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8178 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8179 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8180 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8181 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8182 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8183 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8184 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8185 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8186 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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diff
changeset
|
8187 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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diff
changeset
|
8188 |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
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diff
changeset
|
8189 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
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diff
changeset
|
8190 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
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diff
changeset
|
8191 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
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parents:
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diff
changeset
|
8192 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8193 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
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diff
changeset
|
8194 |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8195 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8196 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8197 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8198 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8199 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
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parents:
432
diff
changeset
|
8200 |
|
436
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8201 |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8202 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8203 # This test fails in Orthanc <= 1.9.7 |
|
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added test_dicom_seg
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diff
changeset
|
8204 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
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added test_dicom_seg
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diff
changeset
|
8205 |
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9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8206 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8207 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8208 |
|
9f87d5b2b382
added test_dicom_seg
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433
diff
changeset
|
8209 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8210 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8211 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8212 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8213 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8214 self.assertEqual('L', im.mode) |
|
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added test_dicom_seg
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diff
changeset
|
8215 self.assertEqual(256, im.size[0]) |
|
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added test_dicom_seg
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diff
changeset
|
8216 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8217 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8218 e = im.getextrema() |
|
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added test_dicom_seg
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parents:
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diff
changeset
|
8219 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8220 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8221 if e[1] == 0: |
|
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added test_dicom_seg
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parents:
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diff
changeset
|
8222 self.assertFalse(i in nonEmptyFrames) |
|
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added test_dicom_seg
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diff
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|
8223 else: |
|
9f87d5b2b382
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parents:
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diff
changeset
|
8224 self.assertTrue(i in nonEmptyFrames) |
|
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added test_dicom_seg
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parents:
433
diff
changeset
|
8225 |
|
9f87d5b2b382
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433
diff
changeset
|
8226 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
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diff
changeset
|
8227 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
8228 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
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diff
changeset
|
8229 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
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diff
changeset
|
8230 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
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diff
changeset
|
8231 |
|
9f87d5b2b382
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diff
changeset
|
8232 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8233 |
| 8234 | |
| 8235 def test_numpy(self): | |
| 8236 # New in Orthanc 1.9.8 | |
| 8237 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 8238 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8239 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
| 8240 | |
| 8241 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8242 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8243 self.assertEqual(numpy.float32, c.dtype) | |
| 8244 self.assertEqual((288, 288, 1), c.shape) | |
| 8245 | |
| 8246 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8247 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8248 self.assertEqual(numpy.uint16, c.dtype) | |
| 8249 self.assertEqual((288, 288, 1), c.shape) | |
| 8250 | |
| 8251 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8252 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8253 self.assertEqual(numpy.float32, c.dtype) | |
| 8254 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8255 | |
| 8256 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8257 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8258 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8259 self.assertEqual(numpy.float32, c.dtype) | |
| 8260 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8261 | |
| 8262 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8263 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8264 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8265 self.assertEqual(numpy.float32, c.dtype) | |
| 8266 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8267 | |
| 8268 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8269 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8270 self.assertEqual(1, len(c.files)) | |
| 8271 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8272 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8273 | |
| 8274 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8275 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8276 self.assertEqual(numpy.float32, c.dtype) | |
| 8277 self.assertEqual((256, 256, 1), c.shape) | |
| 8278 | |
| 8279 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8280 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8281 self.assertEqual(numpy.float32, c.dtype) | |
| 8282 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8283 | |
| 8284 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8285 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8286 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8287 self.assertEqual(numpy.float32, c.dtype) | |
| 8288 self.assertEqual((96, 256, 256, 1), c.shape) |