Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 543:8722f7f95a38
fix
author | Alain Mazy <am@osimis.io> |
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date | Tue, 20 Jun 2023 17:24:56 +0200 |
parents | ea1003982c27 |
children | 7de5fd295025 |
rev | line source |
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22 | 1 #!/usr/bin/env python |
2 # -*- coding: utf-8 -*- | |
3 | |
4 | |
3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2023 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
3 | 10 # |
11 # This program is free software: you can redistribute it and/or | |
12 # modify it under the terms of the GNU General Public License as | |
13 # published by the Free Software Foundation, either version 3 of the | |
14 # License, or (at your option) any later version. | |
15 # | |
16 # This program is distributed in the hope that it will be useful, but | |
17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
19 # General Public License for more details. | |
20 # | |
21 # You should have received a copy of the GNU General Public License | |
22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
23 | |
24 | |
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25 import base64 |
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26 import bz2 |
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27 import copy |
440 | 28 import io |
439
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29 import numpy |
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30 import pprint |
439
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31 import shutil |
14 | 32 import tempfile |
3 | 33 import unittest |
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34 import time |
529 | 35 import os |
3 | 36 |
11 | 37 from PIL import ImageChops |
3 | 38 from Toolbox import * |
13 | 39 from xml.dom import minidom |
312 | 40 from datetime import datetime |
3 | 41 |
42 _LOCAL = None | |
43 _REMOTE = None | |
306
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44 _DOCKER = False |
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45 |
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46 |
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47 def SetOrthancParameters(local, remote, withinDocker): |
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48 global _LOCAL, _REMOTE, _DOCKER |
3 | 49 _LOCAL = local |
50 _REMOTE = remote | |
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51 _DOCKER = withinDocker |
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52 |
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53 |
14 | 54 def ExtractDicomTags(rawDicom, tags): |
55 with tempfile.NamedTemporaryFile(delete = True) as f: | |
56 f.write(rawDicom) | |
57 f.flush() | |
45 | 58 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
14 | 59 |
60 result = [] | |
61 for tag in tags: | |
62 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
63 if match == None: | |
64 result.append('') | |
65 else: | |
66 result.append(match.group(1)) | |
67 | |
68 return result | |
69 | |
70 | |
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71 def CompareLists(a, b): |
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72 if len(a) != len(b): |
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73 return False |
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74 |
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75 for i in range(len(a)): |
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76 d = a[i] - b[i] |
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77 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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78 return False |
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79 |
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80 return True |
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81 |
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82 |
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83 def CompareTags(a, b, tagsToIgnore): |
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84 for i in tagsToIgnore: |
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85 if i in a: |
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86 del a[i] |
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87 if i in b: |
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88 del b[i] |
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89 |
123 | 90 if a.keys() == b.keys(): |
91 return True | |
92 else: | |
93 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
94 return False | |
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95 |
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96 |
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97 def CallFindScu(args): |
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98 p = subprocess.Popen([ FindExecutable('findscu'), |
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99 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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100 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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101 stderr=subprocess.PIPE) |
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102 return p.communicate()[1] |
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103 |
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104 |
142 | 105 def GetMoveScuCommand(): |
106 return [ | |
107 FindExecutable('movescu'), | |
108 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
109 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
110 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
111 _REMOTE['Server'], | |
112 str(_REMOTE['DicomPort']) | |
113 ] | |
114 | |
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115 |
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116 def IsDicomUntilPixelDataStored(orthanc): |
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117 # This function detects whether the "StorageCompression" option is |
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118 # "true", OR the storage area does not support read-range |
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119 |
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120 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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121 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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122 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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123 if a != 0x03a0: |
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124 raise Exception('Internal error') |
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125 |
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126 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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127 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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128 raise Exception('Internal error') |
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129 |
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130 DoDelete(orthanc, '/instances/%s' % i) |
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131 |
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132 if len(a) == 1: |
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133 return False |
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134 elif 'dicom-until-pixel-data' in a: |
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135 return True |
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136 else: |
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137 raise Exception('Internal error') |
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138 |
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139 else: |
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140 return False |
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141 |
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142 |
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143 def CallMoveScu(args): |
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144 try: |
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145 subprocess.check_call(GetMoveScuCommand() + args, |
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146 stderr = subprocess.PIPE) |
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147 except subprocess.CalledProcessError as e: |
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148 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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149 # that has been introduced in DCMTK 3.6.2. This error code is |
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150 # expected by some tests that try and C-MOVE non-existing |
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151 # DICOM instances. |
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152 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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153 if e.returncode != 69: |
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154 raise e |
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155 |
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156 |
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157 def GenerateTestSequence(): |
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158 return [ |
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159 { |
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160 'StudyDescription': 'Hello^', |
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161 'ReferencedStudySequence' : [ |
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162 { |
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163 'StudyDescription': 'Toto', |
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164 }, |
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165 { |
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166 'StudyDescription': 'Tata', |
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167 }, |
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168 ] |
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169 }, |
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170 { |
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171 'StudyDescription': 'Sébastien^', |
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172 'StudyDate' : '19700202', |
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173 } |
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174 ] |
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175 |
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176 |
3 | 177 class Orthanc(unittest.TestCase): |
178 def setUp(self): | |
83 | 179 if (sys.version_info >= (3, 0)): |
180 # Remove annoying warnings about unclosed socket in Python 3 | |
181 import warnings | |
182 warnings.simplefilter("ignore", ResourceWarning) | |
183 | |
508 | 184 print('running : %s' % self.id()) |
185 | |
3 | 186 DropOrthanc(_LOCAL) |
187 DropOrthanc(_REMOTE) | |
174 | 188 UninstallLuaCallbacks(_REMOTE) |
423
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189 |
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190 # Reset stuff possibly set by some integration tests |
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191 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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192 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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193 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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194 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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195 |
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196 for i in [ 'toto', 'tata' ]: |
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197 if i in DoGet(_REMOTE, '/modalities'): |
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198 DoDelete(_REMOTE, '/modalities/%s' % i) |
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199 if i in DoGet(_REMOTE, '/peers'): |
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200 DoDelete(_REMOTE, '/peers/%s' % i) |
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201 |
312 | 202 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
44
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203 |
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204 def AssertSameImages(self, truth, url): |
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205 im = GetImage(_REMOTE, url) |
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206 self.assertTrue(CompareLists(truth, im.getdata())) |
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207 |
3 | 208 |
209 def test_system(self): | |
177 | 210 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
211 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
212 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
213 | |
512 | 214 systemInfo = DoGet(_REMOTE, '/system') |
215 | |
471 | 216 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
512 | 217 self.assertIn("MainDicomTags", systemInfo) |
218 self.assertIn("Patient", systemInfo["MainDicomTags"]) | |
219 self.assertIn("Study", systemInfo["MainDicomTags"]) | |
220 self.assertIn("Series", systemInfo["MainDicomTags"]) | |
221 self.assertIn("Instance", systemInfo["MainDicomTags"]) | |
222 | |
223 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
224 self.assertIn("UserMetadata", systemInfo) | |
225 self.assertEqual(1098, systemInfo['UserMetadata']['my-metadata'] ) | |
226 | |
177 | 227 if systemInfo["Version"] == "mainline": |
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228 print("Skipping version checks since you're currently in mainline") |
177 | 229 return |
230 | |
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231 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 7): |
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232 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
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233 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) |
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234 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) |
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235 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) |
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236 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) |
3 | 237 |
456 | 238 |
512 | 239 |
3 | 240 def test_upload(self): |
173 | 241 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
242 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
243 | |
244 sizeDummyCT = 2472 | |
245 sizeOverwrite = 2476 | |
246 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
247 | |
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248 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
3 | 249 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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250 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
183 | 251 self.assertEqual(instance, u['ID']) |
3 | 252 self.assertEqual('Success', u['Status']) |
173 | 253 |
183 | 254 if True: |
255 # New test for Orthanc 1.4.3 | |
256 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
257 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
258 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
259 | |
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260 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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261 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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262 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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263 j = 0 |
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264 else: |
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265 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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266 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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267 |
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268 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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269 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
447 | 270 |
271 if isCompressed: | |
272 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
273 else: | |
274 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
275 | |
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276 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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277 self.assertIn('Uuid', attachmentInfo) |
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278 self.assertEqual(1, attachmentInfo['ContentType']) |
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279 |
173 | 280 s = sizeDummyCT + j |
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281 |
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282 if isCompressed: |
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283 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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284 else: |
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285 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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286 |
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287 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 288 |
3 | 289 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
290 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
291 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
292 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
293 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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294 |
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295 if isCompressed: |
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296 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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297 else: |
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298 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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299 |
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300 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 301 |
302 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
3 | 303 self.assertEqual('20070101', i['StudyDate']) |
173 | 304 self.assertEqual('KNIX', i['PatientName']) |
305 | |
306 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
307 # Overwriting | |
308 self.assertEqual('Success', u['Status']) | |
309 else: | |
310 self.assertEqual('AlreadyStored', u['Status']) | |
311 | |
312 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
313 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
314 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
315 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
316 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
317 | |
318 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
319 # Overwriting | |
320 self.assertEqual('Success', u['Status']) | |
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321 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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322 j2 = 0 |
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323 else: |
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324 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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325 self.assertNotEqual(j, j2) |
173 | 326 s2 = sizeOverwrite + j2 |
327 self.assertNotEqual(s, s2) | |
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328 if isCompressed: |
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329 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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330 else: |
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331 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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332 |
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333 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 334 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
335 self.assertEqual('ANOTHER', i['PatientName']) | |
336 else: | |
337 self.assertEqual('AlreadyStored', u['Status']) | |
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338 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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339 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
3 | 340 |
5 | 341 def test_upload_2(self): |
3 | 342 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
343 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
344 self.assertEqual(i, instance['ID']) | |
345 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
346 instance['MainDicomTags']['SOPInstanceUID']) | |
347 | |
348 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
349 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
350 series['MainDicomTags']['SeriesInstanceUID']) | |
351 | |
352 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
353 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
354 study['MainDicomTags']['StudyInstanceUID']) | |
355 | |
356 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
357 self.assertEqual('ozp00SjY2xG', | |
358 patient['MainDicomTags']['PatientID']) | |
359 | |
360 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
361 self.assertEqual(2472, len(dicom)) | |
362 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
363 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
364 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
365 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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366 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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367 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
3 | 368 |
369 | |
5 | 370 def test_images(self): |
371 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
372 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
3 | 373 |
5 | 374 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
375 self.assertEqual("L", im.mode) | |
376 self.assertEqual(512, im.size[0]) | |
377 self.assertEqual(358, im.size[1]) | |
378 | |
379 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
380 self.assertEqual("L", im.mode) | |
381 self.assertEqual(512, im.size[0]) | |
382 self.assertEqual(358, im.size[1]) | |
383 | |
384 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
385 self.assertEqual(512, im.size[0]) | |
386 self.assertEqual(358, im.size[1]) | |
387 | |
388 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
389 self.assertEqual("L", im.mode) | |
390 self.assertEqual(512, im.size[0]) | |
391 self.assertEqual(358, im.size[1]) | |
392 | |
393 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
394 self.assertEqual("L", im.mode) | |
395 self.assertEqual(512, im.size[0]) | |
396 self.assertEqual(358, im.size[1]) | |
397 | |
398 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
399 self.assertEqual(512, im.size[0]) | |
400 self.assertEqual(358, im.size[1]) | |
64 | 401 |
402 # This is Little Endian Explicit | |
403 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
404 | |
464
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405 def test_images_implicit_vr(self): |
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406 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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407 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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408 |
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409 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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410 self.assertEqual("RGB", im.mode) |
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411 self.assertEqual(800, im.size[0]) |
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412 self.assertEqual(600, im.size[1]) |
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413 |
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414 |
6 | 415 def test_hierarchy(self): |
416 UploadFolder(_REMOTE, 'Brainix/Epi') | |
417 UploadFolder(_REMOTE, 'Brainix/Flair') | |
418 UploadFolder(_REMOTE, 'Knee/T1') | |
419 UploadFolder(_REMOTE, 'Knee/T2') | |
420 | |
421 p = DoGet(_REMOTE, '/patients') | |
422 s = DoGet(_REMOTE, '/studies') | |
423 t = DoGet(_REMOTE, '/series') | |
424 self.assertEqual(2, len(p)) | |
425 self.assertEqual(2, len(s)) | |
426 self.assertEqual(4, len(t)) | |
427 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
428 | |
429 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
430 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
431 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
432 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
433 | |
434 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
435 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
436 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
437 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
438 | |
439 self.assertTrue(brainixPatient in p) | |
440 self.assertTrue(kneePatient in p) | |
441 self.assertTrue(brainixStudy in s) | |
442 self.assertTrue(kneeStudy in s) | |
443 self.assertTrue(brainixEpi in t) | |
444 self.assertTrue(brainixFlair in t) | |
445 self.assertTrue(kneeT1 in t) | |
446 self.assertTrue(kneeT2 in t) | |
447 | |
448 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
449 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
450 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
451 | |
452 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
453 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
454 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
455 | |
456 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
457 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
458 | |
459 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
460 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
461 | |
462 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
463 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
464 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
465 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
466 | |
467 for patient in p: | |
468 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
469 self.assertEqual(patient, study['ParentPatient']) | |
470 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
471 self.assertEqual(study['ID'], series['ParentStudy']) | |
211 | 472 self.assertEqual('Unknown', series['Status']) |
6 | 473 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
474 self.assertEqual(series['ID'], instance['ParentSeries']) | |
475 | |
380
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476 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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477 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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478 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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479 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
6 | 480 |
481 | |
482 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
483 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
484 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
485 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
486 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
487 self.assertEqual(None, r) | |
488 | |
489 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
490 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
491 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
492 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
493 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
494 self.assertEqual('Study', r['Type']) | |
495 self.assertEqual(kneeStudy, r['ID']) | |
496 | |
497 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
498 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
499 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
500 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
501 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
502 self.assertEqual('Series', r['Type']) | |
503 self.assertEqual(kneeT1, r['ID']) | |
504 | |
505 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
506 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
507 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
508 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
509 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
510 self.assertEqual(None, r) | |
511 | |
512 DropOrthanc(_REMOTE) | |
513 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
514 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
7 | 515 |
213
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516 def test_delete_cascade(self): |
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517 # make sure deleting the last instance of a study deletes the series, study and patient |
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518 |
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519 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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520 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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521 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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522 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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523 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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524 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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525 |
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526 DoDelete(_REMOTE, '/instances/%s' % a) |
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527 |
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528 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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529 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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530 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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531 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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532 |
7 | 533 |
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534 def test_multiframe(self): |
7 | 535 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
536 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
537 | |
538 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
539 self.assertEqual("L", im.mode) | |
540 self.assertEqual(512, im.size[0]) | |
541 self.assertEqual(512, im.size[1]) | |
542 | |
543 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
544 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
545 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
546 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
547 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
548 | |
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549 |
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550 def test_changes(self): |
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551 # Check emptiness |
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552 c = DoGet(_REMOTE, '/changes') |
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553 self.assertEqual(0, len(c['Changes'])) |
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554 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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555 self.assertTrue(c['Done']) |
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556 c = DoGet(_REMOTE, '/changes?last') |
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557 self.assertEqual(0, len(c['Changes'])) |
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558 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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559 self.assertTrue(c['Done']) |
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560 |
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561 # Add 1 instance |
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562 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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563 c = DoGet(_REMOTE, '/changes') |
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564 begin = c['Last'] |
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565 self.assertEqual(4, len(c['Changes'])) |
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566 self.assertTrue(c['Done']) |
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567 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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568 |
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569 # Check the order in which the creation events are reported |
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570 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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571 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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572 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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573 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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574 |
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575 c = DoGet(_REMOTE, '/changes?last') |
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576 self.assertEqual(1, len(c['Changes'])) |
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577 self.assertEqual(begin, c['Last']) |
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578 self.assertTrue(c['Done']) |
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579 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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580 self.assertEqual(1, len(c['Changes'])) |
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581 self.assertEqual(begin, c['Last']) |
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582 self.assertTrue(c['Done']) |
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583 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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584 self.assertEqual(1, len(c['Changes'])) |
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585 self.assertEqual(begin - 1, c['Last']) |
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586 self.assertFalse(c['Done']) |
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587 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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588 self.assertEqual(1, len(c['Changes'])) |
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589 self.assertEqual(begin - 2, c['Last']) |
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590 self.assertFalse(c['Done']) |
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591 |
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592 UploadFolder(_REMOTE, 'Knee/T1') |
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593 UploadFolder(_REMOTE, 'Knee/T2') |
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594 since = begin |
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595 countPatients = 0 |
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596 countStudies = 0 |
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597 countSeries = 0 |
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598 countInstances = 0 |
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599 completed = 0 |
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600 while True: |
530 | 601 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 1000 }) |
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602 since = c['Last'] |
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603 for i in c['Changes']: |
530 | 604 # We have set StableAge to 1 -> we might have StabeStudy but this is not sure -> detect only the 'New' events |
605 | |
606 if i['ResourceType'] == 'Instance' and i['ChangeType'] == 'NewInstance': | |
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607 countInstances += 1 |
530 | 608 if i['ResourceType'] == 'Patient' and i['ChangeType'] == 'NewPatient': |
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609 countPatients += 1 |
530 | 610 if i['ResourceType'] == 'Study' and i['ChangeType'] == 'NewStudy': |
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611 countStudies += 1 |
530 | 612 if i['ResourceType'] == 'Series' and i['ChangeType'] == 'NewSeries': |
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613 countSeries += 1 |
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614 if i['ChangeType'] == 'CompletedSeries': |
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615 completed += 1 |
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616 self.assertTrue('ID' in i) |
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617 self.assertTrue('Path' in i) |
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618 self.assertTrue('Seq' in i) |
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619 if c['Done']: |
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620 break |
530 | 621 # we count only the events since before the upload of 2 Knee series ! |
622 self.assertEqual(50, countInstances) | |
623 self.assertEqual(1, countPatients) | |
624 self.assertEqual(1, countStudies) | |
625 self.assertEqual(2, countSeries) | |
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626 self.assertEqual(0, completed) |
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627 |
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628 |
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629 def test_archive(self): |
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630 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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631 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
192 | 632 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
633 | |
634 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
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635 self.assertEqual(2, len(z.namelist())) |
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636 |
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637 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
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638 self.assertEqual(2, len(z.namelist())) |
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639 |
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640 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
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641 self.assertEqual(1, len(z.namelist())) |
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642 |
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643 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
192 | 644 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
645 | |
646 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
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647 self.assertEqual(2, len(z.namelist())) |
192 | 648 |
649 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
650 'Resources' : [ brainix, knee ] | |
651 }) | |
652 self.assertEqual(3, len(z.namelist())) | |
403
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653 |
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654 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
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655 'Synchronous' : True |
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656 }) |
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657 self.assertEqual(2, len(z.namelist())) |
192 | 658 |
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659 |
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660 def test_media_archive(self): |
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661 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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662 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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663 |
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664 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
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665 self.assertEqual(3, len(z.namelist())) |
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666 self.assertTrue('IMAGES/IM0' in z.namelist()) |
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667 self.assertTrue('IMAGES/IM1' in z.namelist()) |
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668 self.assertTrue('DICOMDIR' in z.namelist()) |
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669 |
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670 try: |
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671 os.remove('/tmp/DICOMDIR') |
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672 except: |
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673 # The file does not exist |
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674 pass |
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675 |
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676 z.extract('DICOMDIR', '/tmp') |
45 | 677 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
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678 stderr = subprocess.STDOUT).split('\n') |
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679 self.assertEqual(3, len(a)) |
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680 self.assertTrue(a[0].startswith('Warning')) |
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681 self.assertEqual('BasicDirectory', a[1]) |
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682 self.assertEqual('', a[2]) |
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683 |
45 | 684 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
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685 stderr = subprocess.STDOUT).split('\n') |
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686 self.assertEqual(1, len(a)) |
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687 self.assertEqual('', a[0]) |
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688 |
45 | 689 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
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690 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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691 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
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692 |
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693 os.remove('/tmp/DICOMDIR') |
10 | 694 |
695 | |
696 def test_protection(self): | |
697 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
698 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
699 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
700 a = DoGet(_REMOTE, '/patients')[0] | |
701 b = DoGet(_REMOTE, '/patients')[1] | |
702 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
703 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
704 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
705 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
706 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
707 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
708 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
709 | |
710 | |
12 | 711 def test_raw_tags(self): |
10 | 712 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
713 | |
714 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
715 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
716 | |
717 s = '/instances/%s/content/' % i | |
718 | |
719 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
720 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
721 | |
722 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
723 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
724 | |
725 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
726 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
727 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
728 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
729 | |
730 for i in DoGet(_REMOTE, '/instances'): | |
731 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
732 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
733 | |
734 | |
735 def test_raw_tags_mdn(self): | |
736 # Bug reported by Cyril Paulus | |
737 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
738 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
739 | |
740 | |
741 def test_modify_instance(self): | |
742 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
743 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
744 json.dumps({ | |
745 "Replace" : { | |
746 "PatientName" : "hello", | |
747 #"PatientID" : "world" | |
748 }, | |
749 "Remove" : [ "StationName" ], | |
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750 "RemovePrivateTags" : True |
10 | 751 }), |
752 'application/json') | |
753 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
754 | |
755 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
756 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
83 | 757 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
10 | 758 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
759 | |
760 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
761 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
762 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
763 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
764 | |
765 | |
766 def test_modify_series(self): | |
767 # Upload 4 images from the same series | |
768 for i in range(4): | |
769 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
770 | |
771 origSeries = DoGet(_REMOTE, '/series')[0] | |
772 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
773 '{"Replace":{"PatientName":"Jodogne"}}', | |
774 'application/json')['ID'] | |
775 | |
776 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
777 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
778 self.assertEqual(4, len(instances)) | |
779 for i in instances: | |
780 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
781 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
782 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
783 | |
784 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
785 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
786 | |
787 | |
788 def test_modify_study(self): | |
789 # Upload 4 images from the 2 series of the same study | |
790 for i in range(4): | |
791 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
792 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
793 | |
794 origStudy = DoGet(_REMOTE, '/studies')[0] | |
795 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
796 '{"Replace":{"PatientName":"Jodogne"}}', | |
797 'application/json')['ID'] | |
798 | |
799 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
800 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
801 self.assertEqual(2, len(series)) | |
802 for s in series: | |
803 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
804 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
805 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
806 | |
807 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
808 for i in instances: | |
809 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
810 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
811 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
812 | |
813 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
814 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
815 | |
816 | |
817 def test_anonymize_series(self): | |
818 # Upload 4 images from the same series | |
819 for i in range(4): | |
820 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
821 | |
822 origSeries = DoGet(_REMOTE, '/series')[0] | |
823 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
824 '{}', | |
825 'application/json')['ID'] | |
826 | |
827 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
828 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
829 self.assertEqual(4, len(instances)) | |
830 for i in instances: | |
831 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
832 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
833 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
834 | |
835 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
836 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
837 | |
838 | |
839 def test_anonymize_study(self): | |
840 # Upload 4 images from the 2 series of the same study | |
841 for i in range(4): | |
842 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
843 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
844 | |
845 origStudy = DoGet(_REMOTE, '/studies')[0] | |
846 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
847 '{"Replace":{"PatientName":"Jodogne"}}', | |
848 'application/json')['ID'] | |
849 | |
850 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
851 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
852 self.assertEqual(2, len(series)) | |
853 for s in series: | |
854 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
855 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
856 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
857 | |
858 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
859 for i in instances: | |
860 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
861 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
862 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
863 | |
864 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
865 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
11 | 866 |
867 | |
868 | |
869 def test_storescu(self): | |
870 # Check emptiness | |
871 e = DoGet(_REMOTE, '/exports') | |
872 self.assertEqual(0, len(e['Exports'])) | |
873 self.assertEqual(0, e['Last']) | |
874 self.assertTrue(e['Done']) | |
875 e = DoGet(_REMOTE, '/exports?last') | |
876 self.assertEqual(0, len(e['Exports'])) | |
877 self.assertEqual(0, e['Last']) | |
878 self.assertTrue(e['Done']) | |
879 | |
880 # Add 1 instance | |
881 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
882 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
883 | |
884 # Export the instance | |
885 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
886 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
887 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
888 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
889 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
890 | |
891 e = DoGet(_REMOTE, '/exports') | |
892 self.assertEqual(1, len(e['Exports'])) | |
893 self.assertTrue(e['Done']) | |
894 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
895 e = DoGet(_REMOTE, '/exports?limit=1') | |
896 self.assertEqual(1, len(e['Exports'])) | |
897 self.assertTrue(e['Done']) | |
898 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
899 e = DoGet(_REMOTE, '/exports?last') | |
900 self.assertEqual(1, len(e['Exports'])) | |
901 self.assertTrue(e['Done']) | |
902 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
903 seqInstance = e['Last'] | |
904 | |
905 # Export the series | |
906 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
907 | |
908 e = DoGet(_REMOTE, '/exports') | |
909 self.assertEqual(2, len(e['Exports'])) | |
910 self.assertTrue(e['Done']) | |
911 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
912 seqSeries = e['Last'] | |
913 self.assertNotEqual(seqInstance, seqSeries) | |
914 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
915 self.assertEqual(1, len(e['Exports'])) | |
916 self.assertFalse(e['Done']) | |
917 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
918 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
919 self.assertEqual(1, len(e['Exports'])) | |
920 self.assertTrue(e['Done']) | |
921 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
922 e = DoGet(_REMOTE, '/exports?last') | |
923 self.assertEqual(1, len(e['Exports'])) | |
924 self.assertTrue(e['Done']) | |
925 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
926 | |
927 # Export the study | |
928 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
929 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
930 | |
931 # Export the patient | |
932 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
933 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
934 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
935 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
936 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
937 | |
938 e = DoGet(_REMOTE, '/exports') | |
939 self.assertEqual(4, len(e['Exports'])) | |
940 self.assertTrue(e['Done']) | |
941 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
942 seqPatient = e['Last'] | |
943 self.assertNotEqual(seqInstance, seqSeries) | |
944 self.assertNotEqual(seqSeries, seqStudy) | |
945 self.assertNotEqual(seqStudy, seqPatient) | |
946 self.assertTrue(seqInstance < seqSeries) | |
947 self.assertTrue(seqSeries < seqStudy) | |
948 self.assertTrue(seqStudy < seqPatient) | |
949 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
950 self.assertEqual(1, len(e['Exports'])) | |
951 self.assertFalse(e['Done']) | |
952 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
953 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
954 self.assertEqual(1, len(e['Exports'])) | |
955 self.assertFalse(e['Done']) | |
956 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
957 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
958 self.assertEqual(1, len(e['Exports'])) | |
959 self.assertFalse(e['Done']) | |
960 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
961 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
962 self.assertEqual(1, len(e['Exports'])) | |
963 self.assertTrue(e['Done']) | |
964 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
965 e = DoGet(_REMOTE, '/exports?last') | |
966 self.assertEqual(1, len(e['Exports'])) | |
967 self.assertTrue(e['Done']) | |
968 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
969 | |
970 | |
971 # Check the content of the logged information | |
972 e = DoGet(_REMOTE, '/exports')['Exports'] | |
973 | |
974 if 'PatientID' in e[0]: | |
975 # Since Orthanc 0.8.6 | |
976 patient = 'PatientID' | |
977 study = 'StudyInstanceUID' | |
978 series = 'SeriesInstanceUID' | |
979 instance = 'SOPInstanceUID' | |
980 else: | |
981 # Up to Orthanc 0.8.5 | |
982 patient = 'PatientId' | |
983 study = 'StudyInstanceUid' | |
984 series = 'SeriesInstanceUid' | |
985 instance = 'SopInstanceUid' | |
986 | |
987 for k in range(4): | |
988 self.assertTrue('Date' in e[k]) | |
989 self.assertTrue('Seq' in e[k]) | |
990 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
991 | |
992 self.assertEqual(10, len(e[0])) | |
993 self.assertEqual('Instance', e[0]['ResourceType']) | |
994 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
995 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
996 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
997 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
998 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
999 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
1000 | |
1001 self.assertEqual(9, len(e[1])) | |
1002 self.assertEqual('Series', e[1]['ResourceType']) | |
1003 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
1004 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
1005 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
1006 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
1007 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
1008 | |
1009 self.assertEqual(8, len(e[2])) | |
1010 self.assertEqual('Study', e[2]['ResourceType']) | |
1011 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
1012 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
1013 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
1014 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
1015 | |
1016 self.assertEqual(7, len(e[3])) | |
1017 self.assertEqual('Patient', e[3]['ResourceType']) | |
1018 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
1019 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
1020 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
1021 | |
1022 DropOrthanc(_REMOTE) | |
1023 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
1024 | |
1025 | |
1026 def test_store_peer(self): | |
1027 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
1028 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
1029 | |
1030 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
1031 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
1032 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1033 | |
1034 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
1035 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
1036 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1037 | |
1038 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
1039 | |
1040 DropOrthanc(_REMOTE) | |
1041 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
1042 | |
1043 | |
1044 def test_bulk_storescu(self): | |
1045 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
1046 | |
1047 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1048 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
1049 | |
1050 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
1051 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
1052 | |
1053 DropOrthanc(_LOCAL) | |
1054 | |
1055 # Send using patient's UUID | |
1056 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
1057 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
1058 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
1059 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
1060 | |
1061 | |
1062 def test_color(self): | |
1063 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
1064 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
1065 self.assertEqual("RGB", im.mode) | |
1066 self.assertEqual(41, im.size[0]) | |
1067 self.assertEqual(41, im.size[1]) | |
1068 | |
1069 # http://effbot.org/zone/pil-comparing-images.htm | |
13 | 1070 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
11 | 1071 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
1072 | |
1073 | |
12 | 1074 def test_faking_ruby_put(self): |
1075 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1076 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1077 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1078 a = DoGet(_REMOTE, '/patients')[0] | |
1079 b = DoGet(_REMOTE, '/patients')[1] | |
1080 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1081 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
1082 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1083 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
1084 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1085 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
1086 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1087 | |
1088 | |
1089 def test_faking_ruby_delete(self): | |
1090 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1091 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1092 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1093 a = DoGet(_REMOTE, '/patients')[0] | |
1094 b = DoGet(_REMOTE, '/patients')[1] | |
1095 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
1096 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1097 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
1098 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1099 | |
1100 | |
1101 def test_faking_google_put(self): | |
1102 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1103 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1104 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1105 a = DoGet(_REMOTE, '/patients')[0] | |
1106 b = DoGet(_REMOTE, '/patients')[1] | |
1107 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1108 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
1109 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1110 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
1111 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1112 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
1113 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1114 | |
1115 | |
1116 def test_faking_google_delete(self): | |
1117 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1118 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1119 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1120 a = DoGet(_REMOTE, '/patients')[0] | |
1121 b = DoGet(_REMOTE, '/patients')[1] | |
1122 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
1123 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1124 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
1125 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1126 | |
1127 | |
1128 def test_lua(self): | |
1129 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
1130 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
1131 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
1132 | |
1133 | |
1134 def test_metadata(self): | |
1135 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1136 p = DoGet(_REMOTE, '/patients')[0] | |
1137 i = DoGet(_REMOTE, '/instances')[0] | |
369
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1138 series = DoGet(_REMOTE, '/series')[0] |
12 | 1139 |
1140 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1141 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1142 self.assertEqual(2, len(m)) |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1143 self.assertTrue('MainDicomTagsSignature' in m) |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
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diff
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|
1144 else: |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1145 self.assertEqual(1, len(m)) |
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1146 self.assertTrue('LastUpdate' in m) |
12 | 1147 |
369
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1148 # The lines below failed on Orthanc <= 1.8.2 |
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1149 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1150 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1151 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1152 |
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1153 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
451
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1154 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1155 self.assertEqual(2, len(m)) |
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1156 self.assertTrue('MainDicomTagsSignature' in m) |
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1157 else: |
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1158 self.assertEqual(1, len(m)) |
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1159 self.assertTrue('LastUpdate' in m) |
369
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1160 |
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1161 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
451
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|
1162 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1163 self.assertEqual(3, len(m)) |
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1164 self.assertTrue('MainDicomTagsSignature' in m) |
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1165 else: |
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1166 self.assertEqual(2, len(m)) |
369
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1167 self.assertTrue('LastUpdate' in m) |
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1168 |
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|
1169 # New in Orthanc 1.9.0 |
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1170 self.assertTrue('RemoteAET' in m) |
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1171 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1172 |
12 | 1173 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
451
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|
1174 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1175 self.assertEqual(10, len(m)) |
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1176 self.assertTrue('MainDicomTagsSignature' in m) |
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1177 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
379
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1178 self.assertEqual(9, len(m)) |
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1179 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1180 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1181 else: |
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1182 self.assertEqual(8, len(m)) |
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1183 |
12 | 1184 self.assertTrue('IndexInSeries' in m) |
1185 self.assertTrue('ReceptionDate' in m) | |
1186 self.assertTrue('RemoteAET' in m) | |
63
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diff
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|
1187 self.assertTrue('Origin' in m) |
89
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diff
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1188 self.assertTrue('TransferSyntax' in m) |
95
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diff
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1189 self.assertTrue('SopClassUid' in m) |
145 | 1190 self.assertTrue('RemoteIP' in m) |
1191 self.assertTrue('HttpUsername' in m) | |
63
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diff
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1192 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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diff
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1193 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1194 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
89
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1195 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
95
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1196 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
12 | 1197 |
1198 # Play with custom metadata | |
391
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1199 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1200 self.assertEqual('200', headers['status']) |
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1201 self.assertEqual('', body) |
394
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1202 |
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|
1203 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
397
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394
diff
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|
1204 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
394
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1205 else: |
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1206 self.assertFalse('ETag' in headers) |
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1207 self.assertFalse('etag' in headers) |
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1208 |
12 | 1209 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
451
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changeset
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1210 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1211 self.assertEqual(3, len(m)) |
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|
1212 self.assertTrue('MainDicomTagsSignature' in m) |
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|
1213 else: |
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diff
changeset
|
1214 self.assertEqual(2, len(m)) |
12 | 1215 self.assertTrue('LastUpdate' in m) |
1216 self.assertTrue('5555' in m) | |
1217 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
394
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|
1218 |
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diff
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|
1219 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1220 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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|
1221 'If-Match' : headers['etag'] |
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1222 }) |
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1223 else: |
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|
1224 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
391
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|
1225 |
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diff
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|
1226 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1227 self.assertEqual('200', headers['status']) |
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diff
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|
1228 self.assertEqual('hello', body) |
394
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|
1229 |
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|
1230 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1231 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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|
1232 'If-Match' : headers['etag'] |
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1233 }) |
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1234 else: |
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1235 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1236 |
12 | 1237 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
451
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|
1238 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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diff
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|
1239 self.assertEqual(2, len(m)) |
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|
1240 self.assertTrue('MainDicomTagsSignature' in m) |
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1241 else: |
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|
1242 self.assertEqual(1, len(m)) |
12 | 1243 self.assertTrue('LastUpdate' in m) |
13 | 1244 |
1245 | |
1246 def test_statistics(self): | |
1247 # Upload 16 instances | |
1248 for i in range(4): | |
1249 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
1250 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
1251 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
1252 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
1253 | |
1254 s = DoGet(_REMOTE, '/statistics') | |
1255 self.assertEqual(16, s['CountInstances']) | |
1256 self.assertEqual(2, s['CountPatients']) | |
1257 self.assertEqual(2, s['CountStudies']) | |
1258 self.assertEqual(4, s['CountSeries']) | |
1259 d = int(s['TotalUncompressedSize']) | |
1260 | |
1261 e = 0 | |
1262 for patient in DoGet(_REMOTE, '/patients'): | |
1263 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
1264 self.assertEqual(8, s['CountInstances']) | |
1265 self.assertEqual(1, s['CountStudies']) | |
1266 self.assertEqual(2, s['CountSeries']) | |
1267 e += int(s['UncompressedSize']) | |
1268 | |
1269 for study in DoGet(_REMOTE, '/studies'): | |
1270 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
1271 self.assertEqual(8, s['CountInstances']) | |
1272 self.assertEqual(2, s['CountSeries']) | |
1273 e += int(s['UncompressedSize']) | |
1274 | |
1275 for series in DoGet(_REMOTE, '/series'): | |
1276 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
1277 self.assertEqual(4, s['CountInstances']) | |
1278 e += int(s['UncompressedSize']) | |
1279 | |
1280 self.assertEqual(3 * d, e) | |
1281 | |
1282 | |
1283 def test_custom_attachment(self): | |
380
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1284 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1285 |
13 | 1286 patient = DoGet(_REMOTE, '/patients')[0] |
1287 instance = DoGet(_REMOTE, '/instances')[0] | |
1288 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
1289 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1290 | |
1291 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1292 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
380
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1293 |
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|
1294 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1295 if IsDicomUntilPixelDataStored(_REMOTE): |
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1296 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1297 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
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1298 |
448
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|
1299 # New in Orthanc 1.10.0 |
443
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|
1300 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
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1301 self.assertEqual(2, len(a)) |
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1302 self.assertEqual(1, a['dicom']) |
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1303 self.assertEqual(3, a['dicom-until-pixel-data']) |
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1304 |
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1305 else: |
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1306 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
443
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1307 |
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1308 # New in Orthanc 1.10.0 |
443
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1309 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
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1310 self.assertEqual(1, len(a)) |
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1311 self.assertEqual(1, a['dicom']) |
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1312 else: |
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1313 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1314 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
13 | 1315 |
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1316 # New in Orthanc 1.10.0 |
443
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1317 self.assertRaises(Exception, lambda: DoGet( |
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1318 _REMOTE, '/instances/%s/attachments?full' % instance)) |
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1319 |
13 | 1320 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
1321 hello = 'hellohellohellohellohellohellohellohellohello' | |
1322 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
1323 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1324 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1325 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1326 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
1327 | |
1328 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
1329 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1330 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1331 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1332 size + | |
1333 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
1334 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
1335 | |
1336 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1337 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
1338 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
1339 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
1340 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
392
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1341 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
397
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1342 'If-Match' : '0-%s' % ComputeMD5('world'), |
392
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1343 }) |
393
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test_revisions_attachments
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1344 |
394
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1345 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
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1346 self.assertEqual('200', headers['status']) |
393
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1347 self.assertEqual('world2', body) |
13 | 1348 |
1349 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
392
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1350 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
397
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1351 'If-Match' : '0-%s' % ComputeMD5(hello), |
392
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1352 }) |
13 | 1353 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
1354 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1355 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1356 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
1357 | |
1358 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
394
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1359 |
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1360 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1361 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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1362 'If-Match' : headers['etag'] |
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1363 }) |
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1364 else: |
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1365 self.assertFalse('etag' in headers) |
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1366 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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1367 |
13 | 1368 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
1369 | |
1370 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
1371 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1372 | |
1373 | |
1374 def test_incoming_storescu(self): | |
1375 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
45 | 1376 subprocess.check_call([ FindExecutable('storescu'), |
44
ffa542cce638
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diff
changeset
|
1377 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
13 | 1378 GetDatabasePath('ColorTestImageJ.dcm') ]) |
1379 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1380 | |
63
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1381 i = DoGet(_REMOTE, '/instances') |
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1382 self.assertEqual(1, len(i)) |
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1383 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
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1384 |
451
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1385 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1386 self.assertEqual(10, len(m)) |
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1387 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
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1388 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1389 self.assertEqual(9, len(m)) |
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1390 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1391 else: |
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1392 self.assertEqual(8, len(m)) |
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1393 |
63
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1394 self.assertTrue('IndexInSeries' in m) |
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1395 self.assertTrue('ReceptionDate' in m) |
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1396 self.assertTrue('RemoteAET' in m) |
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diff
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1397 self.assertTrue('Origin' in m) |
89
74b7b9aed5f8
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diff
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1398 self.assertTrue('TransferSyntax' in m) |
95
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1399 self.assertTrue('SopClassUid' in m) |
145 | 1400 self.assertTrue('RemoteIP' in m) |
1401 self.assertTrue('CalledAET' in m) | |
63
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1402 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1403 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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1404 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
89
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1405 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
95
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1406 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
63
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1407 |
369
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1408 series = DoGet(_REMOTE, '/series')[0] |
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1409 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1410 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1411 self.assertEqual(3, len(m)) |
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1412 self.assertTrue('MainDicomTagsSignature' in m) |
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1413 else: |
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1414 self.assertEqual(2, len(m)) |
369
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1415 self.assertTrue('LastUpdate' in m) |
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1416 self.assertTrue('RemoteAET' in m) |
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1417 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1418 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
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1419 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1420 |
13 | 1421 |
1422 def test_incoming_findscu(self): | |
1423 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
1424 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
1425 | |
1426 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
1427 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
1428 self.assertEqual(2, len(patientNames)) | |
1429 self.assertTrue('Test Patient BG ' in patientNames) | |
1430 self.assertTrue('Anonymized' in patientNames) | |
1431 | |
1432 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
1433 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
1434 self.assertEqual(2, len(series)) | |
1435 self.assertTrue('20070208' in series) | |
1436 self.assertTrue('19980312' in series) | |
1437 | |
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diff
changeset
|
1438 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
56
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diff
changeset
|
1439 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
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1440 self.assertEqual(1, len(series)) |
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1441 self.assertTrue('19980312' in series) |
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1442 |
13 | 1443 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
1444 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
1445 self.assertEqual(1, len(series)) | |
1446 | |
1447 # Test the "CaseSentitivePN" flag (false by default) | |
1448 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
1449 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
1450 self.assertEqual(1, len(series)) | |
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|
1451 |
70 | 1452 # Test range search (buggy if Orthanc <= 0.9.6) |
1453 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
1454 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1455 self.assertEqual(2, len(studies)) | |
1456 self.assertTrue('20070208' in studies) | |
1457 self.assertTrue('19980312' in studies) | |
1458 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
1459 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1460 self.assertEqual(1, len(studies)) | |
1461 self.assertTrue('19980312' in studies) | |
1462 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
1463 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1464 self.assertEqual(1, len(studies)) | |
1465 self.assertTrue('19980312' in studies) | |
326
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1466 |
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1467 # Test that "Retrieve AE Title (0008,0054)" is present, which |
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1468 # was *not* the case in Orthanc <= 1.7.2 |
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1469 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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1470 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
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1471 self.assertEqual(2, len(instances)) |
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1472 self.assertEqual('ORTHANC', instances[0].strip()) |
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1473 self.assertEqual('ORTHANC', instances[1].strip()) |
13 | 1474 |
1475 | |
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1476 def test_incoming_findscu_2(self): |
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1477 # This test fails if "LookupMode_DatabaseOnly" is used |
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1478 # (sequences are not available in this mode, and only main |
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1479 # DICOM tags are returned) |
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1480 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1481 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1482 |
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1483 # Test returning sequence values (only since Orthanc 0.9.5) |
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1484 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1485 sequences = re.findall('\(0008,2112\)', i) |
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1486 self.assertEqual(1, len(sequences)) |
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1487 |
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1488 # Test returning a non-main DICOM tag, |
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1489 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1490 # "MEDPC" in "ColorTestImageJ.dcm" |
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1491 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1492 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1493 self.assertEqual(1, len(tags)) |
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1494 |
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1495 |
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1496 def test_incoming_findscu_3(self): |
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1497 # This test fails if "LookupMode_DatabaseOnly" or |
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1498 # "LookupMode_DiskOnAnswer" is used, as |
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1499 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1500 # tag, as thus a constraint cannot be applied to it |
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1501 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1502 |
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1503 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1504 sequences = re.findall('\(0018,1010\)', i) |
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1505 self.assertEqual(1, len(sequences)) |
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1506 |
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1507 |
13 | 1508 def test_incoming_movescu(self): |
1509 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
137
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1510 |
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1511 # No matching patient, so no job is created |
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1512 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1513 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
13 | 1514 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1515 |
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1516 # 1 Matching patient, track the job |
138 | 1517 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
1518 '--patient', | |
1519 '-k', '0008,0052=PATIENT', | |
1520 '-k', 'PatientID=12345678' | |
1521 ]))) | |
13 | 1522 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
1523 | |
1524 | |
1525 def test_findscu(self): | |
1526 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
1527 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
1528 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
1529 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
1530 | |
1531 # Test the "find-patient" level | |
1532 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
1533 self.assertEqual(1, len(p)) | |
1534 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
1535 | |
1536 # Test wildcards constraints. The "LO" value representation | |
1537 # for PatientID is always case-sensitive, but the "PN" for | |
1538 # PatientName might depend on the implementation: | |
1539 # "GenerateConfigurationForTests.py" will force it to be case | |
1540 # insensitive (which was the default until Orthanc 0.8.6). | |
1541 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
1542 self.assertEqual(1, len(p)) | |
1543 | |
1544 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
1545 self.assertEqual(1, len(p)) | |
1546 | |
1547 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
1548 self.assertEqual(1, len(p)) | |
1549 | |
1550 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
1551 self.assertEqual(1, len(p)) | |
1552 | |
1553 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
1554 self.assertEqual(0, len(p)) | |
1555 | |
1556 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
1557 self.assertEqual(0, len(p)) | |
1558 | |
1559 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
1560 self.assertEqual(0, len(p)) | |
1561 | |
1562 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
1563 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
1564 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
1565 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
1566 | |
1567 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
1568 self.assertEqual(2, len(p)) | |
1569 | |
1570 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
1571 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
1572 self.assertEqual(1, len(s)) | |
1573 self.assertEqual('20070208', s[0]['StudyDate']) | |
1574 | |
1575 # Test range searches | |
1576 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1577 'StudyDate' : '-20070101' }) | |
1578 self.assertEqual(0, len(t)) | |
1579 | |
1580 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1581 'StudyDate' : '20090101-' }) | |
1582 self.assertEqual(0, len(t)) | |
1583 | |
1584 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1585 'StudyDate' : '20070101-' }) | |
1586 self.assertEqual(1, len(t)) | |
1587 | |
1588 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1589 'StudyDate' : '-20090101' }) | |
1590 self.assertEqual(1, len(t)) | |
1591 | |
1592 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1593 'StudyDate' : '20070207-20070207' }) | |
1594 self.assertEqual(0, len(t)) | |
1595 | |
1596 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1597 'StudyDate' : '20070208-20070208' }) | |
1598 self.assertEqual(1, len(t)) | |
1599 | |
1600 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1601 'StudyDate' : '20070209-20070209' }) | |
1602 self.assertEqual(0, len(t)) | |
1603 | |
1604 # Test the ModalitiesInStudy tag | |
1605 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1606 'PatientID' : 'B9uTHKOZ', | |
1607 'ModalitiesInStudy' : 'US' }) | |
1608 self.assertEqual(0, len(t)) | |
1609 | |
1610 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1611 'PatientID' : 'B9uTHKOZ', | |
1612 'ModalitiesInStudy' : 'CT' }) | |
1613 self.assertEqual(1, len(t)) | |
1614 | |
1615 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1616 'PatientID' : 'B9uTHKOZ', | |
1617 'ModalitiesInStudy' : 'US\\CT' }) | |
1618 self.assertEqual(1, len(t)) | |
1619 | |
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1620 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1621 'PatientID' : 'B9uTHKOZ', |
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1622 'ModalitiesInStudy' : '' }) |
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1623 self.assertEqual(1, len(t)) |
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1624 |
13 | 1625 # Test the "find-series" level |
1626 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1627 'PatientID' : 'B9uTHKOZ', | |
1628 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
1629 self.assertEqual(1, len(t)) | |
1630 | |
1631 # Test "\" separator | |
1632 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1633 'PatientID' : 'B9uTHKOZ', | |
1634 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
1635 'Modality' : 'MR\\CT\\US' }) | |
1636 self.assertEqual(1, len(t)) | |
1637 | |
1638 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1639 'PatientID' : 'B9uTHKOZ', | |
1640 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
1641 'Modality' : 'MR\\US' }) | |
1642 self.assertEqual(0, len(t)) | |
1643 | |
1644 | |
1645 def test_update_modalities(self): | |
1646 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1647 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
13 | 1648 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
116 | 1649 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
1650 DoDelete(_REMOTE, '/modalities/tata') | |
124 | 1651 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1652 DoDelete(_REMOTE, '/modalities/tata') |
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1653 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
128 | 1654 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
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1655 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1656 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1657 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1658 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
116 | 1659 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
13 | 1660 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
1661 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1662 |
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1663 # New in Orthanc 1.8.1 |
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1664 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1665 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1666 |
13 | 1667 DoDelete(_REMOTE, '/modalities/toto') |
1668 DoDelete(_REMOTE, '/modalities/tata') | |
1669 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
1670 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
1671 | |
1672 | |
1673 def test_update_peers(self): | |
1674 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
1675 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1676 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
13 | 1677 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
214 | 1678 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
1679 'Username': 'user', | |
1680 'Password' : 'pass', | |
1681 'RemoteSelf' : 'self' }) | |
128 | 1682 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
1683 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
1684 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
1685 self.assertEqual('user', peersReadback['tata']['Username']) | |
214 | 1686 |
1687 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
1688 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
1689 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
1690 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
1691 else: | |
1692 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
1693 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
1694 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
1695 | |
128 | 1696 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
1697 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
1698 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
214 | 1699 |
13 | 1700 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
1701 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
1702 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
1703 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1704 |
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1705 # New in Orthanc 1.8.1 |
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1706 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1707 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1708 |
13 | 1709 DoDelete(_REMOTE, '/peers/toto') |
1710 DoDelete(_REMOTE, '/peers/tata') | |
1711 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
1712 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
1713 | |
1714 | |
1715 def test_mesterhazy_modification(self): | |
1716 # When I modify a series ( eg. curl | |
1717 # http://localhost:8042/series/uidhere/modify -X POST -d | |
1718 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
1719 # series is added to a new Study, instead of the existing | |
1720 # Study. Fixed in Orthanc 0.7.5 | |
1721 | |
1722 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
1723 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
1724 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
1725 | |
1726 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
1727 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
1728 | |
1729 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
1730 | |
1731 | |
1732 def test_create(self): | |
1733 i = DoPost(_REMOTE, '/tools/create-dicom', | |
1734 json.dumps({ | |
1735 'PatientName' : 'Jodogne', | |
1736 'Modality' : 'CT', | |
58 | 1737 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
13 | 1738 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
1739 })) | |
1740 | |
1741 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
1742 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
1743 | |
1744 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
1745 self.assertEqual((5, 5), png.size) | |
1746 | |
38 | 1747 j = DoGet(_REMOTE, i['Path']) |
1748 self.assertEqual('Instance', j['Type']) | |
1749 self.assertEqual(j['ID'], i['ID']) | |
1750 | |
13 | 1751 |
1752 def test_pilates(self): | |
1753 # "SCU failed error when accessing orthanc with osirix" by | |
1754 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
1755 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
1756 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
1757 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
1758 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
1759 | |
1760 | |
1761 def test_shared_tags(self): | |
1762 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1763 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
1764 p = DoGet(_REMOTE, '/patients')[0] | |
1765 | |
1766 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1767 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1768 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1769 |
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1770 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1771 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1772 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1773 |
13 | 1774 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
1775 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1776 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1777 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1778 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1779 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1780 | |
1781 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
1782 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
1783 | |
1784 | |
1785 def test_modules(self): | |
1786 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1787 p = DoGet(_REMOTE, '/patients')[0] | |
1788 s = DoGet(_REMOTE, '/studies')[0] | |
1789 t = DoGet(_REMOTE, '/series')[0] | |
1790 | |
1791 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
1792 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
1793 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
1794 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
1795 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
1796 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
1797 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
1798 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
1799 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
1800 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
1801 | |
1802 | |
1803 def test_auto_directory(self): | |
1804 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1805 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
1806 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1807 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
13 | 1808 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
1809 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
1810 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1811 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1812 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1813 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1814 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1815 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1816 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1817 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
1818 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
79 | 1819 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
13 | 1820 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
28 | 1821 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
1822 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
1823 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
1824 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
13 | 1825 |
1826 | |
1827 def test_echo(self): | |
1828 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1829 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1830 |
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1831 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1832 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1833 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1834 |
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1835 # New in Orthanc 1.8.1 |
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1836 DoPost(_REMOTE, '/tools/dicom-echo', [ |
355 | 1837 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1838 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
13 | 1839 |
353 | 1840 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
1841 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
1842 DoPost(_REMOTE, '/tools/dicom-echo', { | |
1843 'AET' : _REMOTE['DicomAet'], | |
1844 'Host' : _REMOTE['Server'], | |
1845 'Port' : _REMOTE['DicomPort'], | |
1846 'CheckFind' : True | |
1847 }) | |
1848 | |
13 | 1849 |
1850 def test_xml(self): | |
1851 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
1852 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
1853 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
1854 self.assertEqual(len(items), len(json)) | |
1855 | |
1856 self.assertTrue('dicom-conformance' in json) | |
1857 | |
1858 ok = False | |
1859 for i in items: | |
1860 if i.childNodes[0].data == 'dicom-conformance': | |
1861 ok = True | |
1862 self.assertTrue(ok) | |
1863 | |
1864 | |
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1865 def test_googlecode_issue_16(self): |
13 | 1866 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
1867 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
1868 self.assertEqual('0018,1063', t) | |
1869 | |
1870 | |
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1871 def test_googlecode_issue_22(self): |
13 | 1872 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
1873 a = [ | |
1874 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
1875 "c69eee9a51eea3e8611e82e578897254", | |
1876 "315666be83e2d0111c77bc0996d84901", | |
1877 "3e27aa959d911172c48a1436443c72b1", | |
1878 "958642c9e7e9d232d3869faff546058c", | |
1879 "5e7ea8e3e4230cae707d143481355c59", | |
1880 "eda37f83558d858a596175aed8b2ad47", | |
1881 "486713bd2895c4ecbe0e97715ac7f80a", | |
1882 "091ef729eb169e67da8a0faa9631f9a8", | |
1883 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
1884 "e2f39e85896fe58876654b94cd0b5013", | |
1885 "6fd2129e4950abbe1be053bc814d5da8", | |
1886 "c3331a8ba7a757f3d423735ab7fa81f9", | |
1887 "746f808582156734dd6b6fdfd3a0b72c", | |
1888 "8075ea2b227a70c60ea6b7b75a6bb190", | |
1889 "806b8b3e300c615099c11a5ec23465aa", | |
1890 "7c836aa298ba6eef96434579af631a11", | |
1891 "a0357dc9f4f72d73a885c33d7c287446", | |
1892 "f25ba3be1cc7d7fad95706adc199ea7d", | |
1893 "8b114c526b8cbed6cad8a3248b7b480c", | |
1894 "44e6670f127e612a2b4aa60a0d207698", | |
1895 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
1896 "95c796c2fa8f59018b15cf2987b1f79b", | |
1897 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
1898 ] | |
1899 | |
1900 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
1901 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
1902 | |
1903 for i in range(len(a)): | |
1904 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
1905 | |
1906 | |
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1907 def test_googlecode_issue_19(self): |
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1908 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
13 | 1909 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
1910 | |
1911 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
304 | 1912 if not HasGdcmPlugin(_REMOTE): |
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1913 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
13 | 1914 |
1915 | |
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1916 def test_googlecode_issue_37(self): |
13 | 1917 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
1918 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
1919 | |
1920 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
1921 'CaseSensitive' : True, | |
1922 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
1923 self.assertEqual(1, len(a)) | |
14 | 1924 |
1925 | |
1926 def test_rest_find(self): | |
1927 # Upload 8 instances | |
1928 for i in range(2): | |
1929 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
1930 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
1931 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
1932 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
1933 | |
1934 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1935 'CaseSensitive' : False, | |
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1936 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1937 self.assertEqual(1, len(a)) |
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1938 |
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1939 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1940 'CaseSensitive' : False, |
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1941 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1942 self.assertEqual(2, len(a)) |
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1943 |
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1944 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1945 'CaseSensitive' : False, |
14 | 1946 'Query' : { 'PatientName' : '*n*' }}) |
1947 self.assertEqual(2, len(a)) | |
1948 | |
1949 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1950 'CaseSensitive' : True, | |
1951 'Query' : { 'PatientName' : '*n*' }}) | |
1952 self.assertEqual(0, len(a)) | |
1953 | |
1954 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
1955 'Level' : 'Patient', | |
1956 'CaseSensitive' : False, | |
1957 'Query' : { 'PatientName' : '*ne*' }}) | |
1958 self.assertEqual(1, len(a)) | |
1959 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
1960 | |
1961 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1962 'CaseSensitive' : True, | |
1963 'Query' : { 'PatientName' : '*ne*' }}) | |
1964 self.assertEqual(0, len(a)) | |
1965 | |
1966 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
1967 'CaseSensitive' : True, | |
1968 'Query' : { 'PatientName' : '*NE*' }}) | |
1969 self.assertEqual(1, len(a)) | |
1970 | |
1971 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
1972 'CaseSensitive' : True, | |
1973 'Query' : { 'PatientName' : '*NE*' }}) | |
1974 self.assertEqual(2, len(a)) | |
1975 | |
1976 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
1977 'CaseSensitive' : True, | |
1978 'Query' : { 'PatientName' : '*NE*' }}) | |
1979 self.assertEqual(4, len(a)) | |
1980 | |
1981 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
1982 self.assertEqual(2, len(a)) | |
1983 | |
1984 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
1985 self.assertEqual(2, len(a)) | |
1986 | |
1987 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
1988 self.assertEqual(4, len(a)) | |
1989 | |
1990 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
1991 self.assertEqual(8, len(a)) | |
1992 | |
194
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1993 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1994 'Expand' : True, |
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1995 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1996 self.assertEqual(1, len(a)) |
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1997 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1998 |
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1999 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2000 'Expand' : True, |
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2001 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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2002 self.assertEqual(2, len(a)) |
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2003 for i in range(2): |
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2004 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2005 |
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2006 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2007 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2008 self.assertEqual(0, len(a)) |
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2009 |
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2010 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2011 'Expand' : True, |
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2012 'Query' : { 'StudyDate' : '-20061201' }}) |
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2013 self.assertEqual(1, len(a)) |
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2014 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2015 |
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2016 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2017 'Expand' : True, |
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2018 'Query' : { 'StudyDate' : '-20051201' }}) |
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2019 self.assertEqual(0, len(a)) |
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2020 |
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2021 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2022 'Expand' : True, |
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2023 'Query' : { 'StudyDate' : '20061201-' }}) |
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2024 self.assertEqual(2, len(a)) |
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2025 for i in range(2): |
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2026 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2027 |
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2028 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2029 'Expand' : True, |
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2030 'Query' : { 'StudyDate' : '20061202-' }}) |
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2031 self.assertEqual(1, len(a)) |
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2032 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2033 |
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2034 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2035 'Expand' : True, |
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2036 'Query' : { 'StudyDate' : '20080819-' }}) |
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2037 self.assertEqual(1, len(a)) |
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2038 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2039 |
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2040 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2041 'Expand' : True, |
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2042 'Query' : { 'StudyDate' : '20080820-' }}) |
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2043 self.assertEqual(0, len(a)) |
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2044 |
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2045 |
14 | 2046 |
2047 def test_rest_query_retrieve(self): | |
2048 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
2049 | |
2050 # Upload 8 instances | |
2051 for i in range(2): | |
2052 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
2053 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
2054 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
2055 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
2056 | |
2057 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
2058 for p in DoGet(_REMOTE, '/patients'): | |
2059 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
2060 DoDelete(_REMOTE, '/patients/%s' % p) | |
2061 | |
2062 for q in DoGet(_REMOTE, '/queries'): | |
2063 DoDelete(_REMOTE, '/queries/%s' % q) | |
2064 | |
2065 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
2066 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
509
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2067 |
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2068 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # TODO: check why this works with 0.8.6 and not with more recent versions |
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2069 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', |
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2070 'Query' : { |
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2071 'PatientName' : '*NE*', |
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2072 'StudyDate' : '*', |
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2073 }})['ID'] |
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2074 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
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2075 |
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2076 b = DoGet(_REMOTE, '/queries/%s' % a) |
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2077 self.assertTrue('answers' in b) |
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2078 self.assertTrue('level' in b) |
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2079 self.assertTrue('modality' in b) |
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2080 self.assertTrue('query' in b) |
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2081 self.assertTrue('retrieve' in b) |
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2082 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) |
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2083 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) |
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2084 |
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2085 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) |
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2086 self.assertEqual(2, len(q)) |
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2087 self.assertTrue('PatientName' in q) |
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2088 self.assertTrue('StudyDate' in q) |
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2089 self.assertEqual('*NE*', q['PatientName']) |
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2090 self.assertEqual('*', q['StudyDate']) |
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2091 |
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2092 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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2093 |
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2094 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) |
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2095 self.assertTrue('content' in s) |
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2096 self.assertTrue('retrieve' in s) |
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2097 |
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2098 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) |
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2099 self.assertEqual('887', s['PatientID']) |
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2100 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) |
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2101 |
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2102 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2103 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') |
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2104 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2105 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2106 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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2107 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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2108 |
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2109 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
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2110 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2111 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2112 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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2113 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
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2114 |
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2115 # New in Orthanc 1.4.3 |
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2116 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2117 self.assertEqual(2, len(s)) |
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2118 for i in range(2): |
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2119 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2120 self.assertEqual('887', s[i]['PatientID']) |
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2121 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2122 |
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2123 DoDelete(_REMOTE, '/queries/%s' % a) |
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2124 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) |
14 | 2125 |
2126 | |
2127 def test_parent(self): | |
2128 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
2129 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
2130 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
2131 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
2132 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
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2133 self.assertEqual(instance, u) |
14 | 2134 |
2135 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
2136 self.assertEqual('Patient', a['Type']) | |
2137 self.assertEqual(patient, a['ID']) | |
2138 | |
2139 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
2140 self.assertEqual('Patient', a['Type']) | |
2141 self.assertEqual(patient, a['ID']) | |
2142 | |
2143 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
2144 self.assertEqual('Study', a['Type']) | |
2145 self.assertEqual(study, a['ID']) | |
2146 | |
2147 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
2148 self.assertEqual('Patient', a['Type']) | |
2149 self.assertEqual(patient, a['ID']) | |
2150 | |
2151 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
2152 self.assertEqual('Study', a['Type']) | |
2153 self.assertEqual(study, a['ID']) | |
2154 | |
2155 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
2156 self.assertEqual('Series', a['Type']) | |
2157 self.assertEqual(series, a['ID']) | |
2158 | |
2159 | |
2160 def test_shanon(self): | |
2161 def Anonymize(instance, replacements = {}): | |
119 | 2162 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
2163 'Replace' : replacements, | |
2164 'Force' : True, | |
2165 }, 'application/json') | |
14 | 2166 |
2167 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
2168 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
2169 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2170 | |
2171 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
2172 ids = [ 'ozp00SjY2xG', | |
2173 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
2174 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
2175 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
2176 | |
2177 a = ExtractDicomTags(Anonymize(u), tags) | |
2178 for i in range(4): | |
2179 self.assertNotEqual(ids[i], a[i]) | |
2180 self.assertTrue(a[4].startswith('Orthanc')) | |
2181 | |
2182 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
2183 for i in range(4): | |
2184 self.assertNotEqual(ids[i], a[i]) | |
2185 self.assertFalse(a[4].startswith('Orthanc')) | |
2186 | |
2187 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
2188 self.assertEqual('instance', a[3]) | |
2189 self.assertFalse(a[4].startswith('Orthanc')) | |
2190 | |
2191 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
2192 self.assertEqual('series', a[2]) | |
2193 self.assertFalse(a[4].startswith('Orthanc')) | |
2194 | |
2195 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
2196 self.assertEqual('study', a[1]) | |
2197 self.assertFalse(a[4].startswith('Orthanc')) | |
2198 | |
2199 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
2200 self.assertEqual('patient', a[0]) | |
2201 self.assertFalse(a[4].startswith('Orthanc')) | |
2202 | |
2203 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
2204 'StudyInstanceUID' : 'study', | |
2205 'SeriesInstanceUID' : 'series', | |
2206 'SOPInstanceUID' : 'instance' }), tags) | |
2207 self.assertEqual('patient', a[0]) | |
2208 self.assertFalse(a[4].startswith('Orthanc')) | |
2209 | |
2210 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2211 | |
2212 | |
2213 def test_shanon_2(self): | |
2214 def Modify(instance, replacements = {}): | |
119 | 2215 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
2216 'Replace' : replacements, | |
2217 'Force': True, | |
2218 }, 'application/json') | |
14 | 2219 |
2220 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
2221 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
2222 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2223 | |
2224 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
2225 ids = [ 'ozp00SjY2xG', | |
2226 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
2227 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
2228 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
2229 | |
2230 a = ExtractDicomTags(Modify(u), tags) | |
2231 self.assertEqual(ids[0], a[0]) | |
2232 self.assertEqual(ids[1], a[1]) | |
2233 self.assertEqual(ids[2], a[2]) | |
2234 self.assertNotEqual(ids[3], a[3]) | |
2235 self.assertEqual(0, len(a[4])) | |
2236 | |
2237 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
2238 self.assertEqual(ids[0], a[0]) | |
2239 self.assertEqual(ids[1], a[1]) | |
2240 self.assertEqual(ids[2], a[2]) | |
2241 self.assertEqual('instance', a[3]) | |
2242 | |
2243 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
2244 self.assertEqual(ids[0], a[0]) | |
2245 self.assertEqual(ids[1], a[1]) | |
2246 self.assertEqual('series', a[2]) | |
2247 self.assertNotEqual(ids[3], a[3]) | |
2248 | |
2249 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
2250 self.assertEqual(ids[0], a[0]) | |
2251 self.assertEqual('study', a[1]) | |
2252 self.assertNotEqual(ids[2], a[2]) | |
2253 self.assertNotEqual(ids[3], a[3]) | |
2254 | |
2255 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
2256 self.assertEqual('patient', a[0]) | |
2257 self.assertNotEqual(ids[1], a[1]) | |
2258 self.assertNotEqual(ids[2], a[2]) | |
2259 self.assertNotEqual(ids[3], a[3]) | |
2260 | |
2261 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
2262 'StudyInstanceUID' : 'study', | |
2263 'SeriesInstanceUID' : 'series', | |
2264 'SOPInstanceUID' : 'instance' }), tags) | |
2265 self.assertEqual('patient', a[0]) | |
2266 self.assertEqual('study', a[1]) | |
2267 self.assertEqual('series', a[2]) | |
2268 self.assertEqual('instance', a[3]) | |
2269 | |
2270 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2271 | |
2272 | |
2273 def test_instances_tags(self): | |
2274 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
2275 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
2276 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
2277 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
2278 | |
2279 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
2280 self.assertEqual(2, len(i)) | |
2281 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2282 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
2283 | |
2284 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
2285 self.assertEqual(2, len(i)) | |
2286 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2287 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
2288 | |
2289 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
2290 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
2291 self.assertEqual(1, len(i)) | |
2292 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2293 | |
2294 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
2295 self.assertEqual(1, len(i)) | |
2296 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2297 | |
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2298 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2299 self.assertEqual(1, len(i)) |
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2300 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2301 |
14 | 2302 |
2303 def test_lookup(self): | |
2304 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
2305 self.assertEqual(0, len(a)) | |
2306 | |
2307 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
2308 | |
2309 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
2310 self.assertEqual(1, len(a)) | |
2311 self.assertEqual('Patient', a[0]['Type']) | |
2312 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
2313 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
2314 | |
2315 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
2316 self.assertEqual(1, len(a)) | |
2317 self.assertEqual('Study', a[0]['Type']) | |
2318 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
2319 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
2320 | |
2321 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
2322 self.assertEqual(1, len(a)) | |
2323 self.assertEqual('Series', a[0]['Type']) | |
2324 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
2325 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
2326 | |
2327 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
2328 self.assertEqual(1, len(a)) | |
2329 self.assertEqual('Instance', a[0]['Type']) | |
2330 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
2331 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
2332 | |
2333 DropOrthanc(_REMOTE) | |
2334 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
2335 self.assertEqual(0, len(a)) | |
2336 | |
15 | 2337 |
2338 def test_autorouting(self): | |
2339 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
2340 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
2341 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
2342 | |
2343 # Check that this version is >= 0.8.0 | |
2344 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
2345 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
2346 | |
2347 UploadInstance(_REMOTE, knee1) | |
2348 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
2349 | |
2350 DropOrthanc(_REMOTE) | |
2351 DropOrthanc(_LOCAL) | |
174 | 2352 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
15 | 2353 UploadInstance(_REMOTE, knee1) |
2354 UploadInstance(_REMOTE, knee2) | |
2355 UploadInstance(_REMOTE, other) | |
2356 WaitEmpty(_REMOTE) | |
174 | 2357 UninstallLuaCallbacks(_REMOTE) |
15 | 2358 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
2359 | |
2360 DropOrthanc(_REMOTE) | |
2361 DropOrthanc(_LOCAL) | |
174 | 2362 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
15 | 2363 UploadInstance(_REMOTE, knee1) |
2364 UploadInstance(_REMOTE, knee2) | |
2365 UploadInstance(_REMOTE, other) | |
2366 WaitEmpty(_REMOTE) | |
174 | 2367 UninstallLuaCallbacks(_REMOTE) |
15 | 2368 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
2369 | |
2370 DropOrthanc(_REMOTE) | |
2371 DropOrthanc(_LOCAL) | |
174 | 2372 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
15 | 2373 UploadInstance(_REMOTE, knee1) |
2374 WaitEmpty(_REMOTE) | |
174 | 2375 UninstallLuaCallbacks(_REMOTE) |
15 | 2376 i = DoGet(_LOCAL, '/instances') |
2377 self.assertEqual(1, len(i)) | |
2378 | |
2379 with tempfile.NamedTemporaryFile(delete = True) as f: | |
2380 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
2381 f.flush() | |
45 | 2382 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
15 | 2383 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
2384 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
2385 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
17 | 2386 |
2387 | |
2388 def test_storescu_rf(self): | |
2389 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
2390 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
2391 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
2392 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
18 | 2393 |
2394 | |
2395 def test_anonymize_instance(self): | |
2396 def AnonymizeAndUpload(instanceId, parameters): | |
2397 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
2398 'application/json'), 'application/dicom')['ID'] | |
2399 | |
2400 def ModifyAndUpload(instanceId, parameters): | |
2401 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
2402 'application/json'), 'application/dicom')['ID'] | |
2403 | |
2404 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
2405 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
2406 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
2407 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
2408 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
2409 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
2410 | |
2411 b = AnonymizeAndUpload(a, '{}') | |
2412 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2413 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2414 | |
2415 # Keep private tag (only OK since Orthanc 0.8.0) | |
2416 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
2417 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2418 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2419 | |
2420 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
2421 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2422 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2423 | |
2424 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
2425 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2426 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
2427 | |
2428 # Examples from the Wiki | |
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2429 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
18 | 2430 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2431 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2432 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2433 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
2434 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
2435 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2436 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
2437 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2438 | |
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2439 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
18 | 2440 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2441 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2442 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2443 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
2444 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2445 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2446 | |
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2447 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
18 | 2448 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2449 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2450 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
2451 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2452 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
2453 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2454 | |
2455 | |
2456 # Test modify non-existing | |
2457 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2458 json.dumps({ | |
2459 'PatientName' : 'Jodogne', | |
2460 'Modality' : 'CT', | |
2461 }))['ID'] | |
2462 | |
2463 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
2464 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
2465 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
2466 | |
2467 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
2468 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
2469 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
2470 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
2471 | |
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2472 |
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2473 def test_incoming_jpeg(self): |
463
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2474 # since this test fails regularly on CI, enable verbosity |
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2475 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
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2476 |
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2477 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
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2478 if acceptUnknownSopClassUid: |
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2479 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2480 else: |
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2481 tmp = [ '-xs' ] |
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2482 |
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2483 while retries > 0: |
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2484 retries -= 1 |
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2485 with open(os.devnull, 'w') as FNULL: |
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2486 try: |
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2487 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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2488 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
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2489 GetDatabasePath(image) ], |
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2490 stderr = FNULL) |
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2491 |
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2492 if expectSuccess: |
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2493 return |
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2494 except subprocess.CalledProcessError as e: |
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2495 print('storescu failed with error code: %s' % str(e.returncode)) |
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2496 if not expectSuccess: |
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2497 raise e |
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2498 |
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2499 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2500 |
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2501 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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2502 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
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2503 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
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2504 ]) |
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2505 self.assertTrue('1.2.840.10008.1.2' in a) |
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2506 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2507 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2508 self.assertEqual(3, len(a)) |
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2509 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2510 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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2511 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2512 else: |
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2513 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
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2514 |
490 | 2515 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
468
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2516 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
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2517 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
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2518 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
373
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2519 |
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2520 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
374 | 2521 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
373
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2522 self.assertGreaterEqual(42, len(a)) |
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2523 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
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2524 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2525 else: |
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2526 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
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2527 |
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2528 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
61
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2529 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
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2530 storescu('UnknownSopClassUid.dcm', True) |
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2531 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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2532 |
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2533 # set back normal verbosity |
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2534 DoPut(_REMOTE, '/tools/log-level', 'default') |
21
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2535 |
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2536 def test_storescu_jpeg(self): |
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2537 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
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2538 |
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2539 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
64 | 2540 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
2541 | |
2542 # This is JPEG lossless | |
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2543 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
64 | 2544 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
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2545 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
64 | 2546 |
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2547 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
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2548 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
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2549 |
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2550 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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2551 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
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2552 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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2553 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
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2554 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
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2555 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 DropOrthanc(_REMOTE) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 def test_pixel_data(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 phenixSize = 358 * 512 * 2 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2568 colorSize = 1000 * 1000 * 3 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2569 jpegSize = 51918 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2570 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2571 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2572 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2573 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2574 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2575 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2576 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2577 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2578 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2579 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2580 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2581 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2582 def test_decode_brainix(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2583 brainix = [ |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2584 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
384 | 2585 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2586 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2587 ] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2588 h = '6fb11b932d535c2be04beabd99793ff8' |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2589 maxValue = 426.0 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2590 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2591 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2592 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2593 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2594 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2595 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 truth2 = map(lambda x: min(255, x), truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 def test_decode_color(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 for i in [ imagej, color ]: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2618 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2619 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2620 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2621 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2622 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2623 def test_decode_rf(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2624 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2625 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2626 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2627 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2628 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2629 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2630 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2631 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2632 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2633 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2634 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2635 def test_decode_multiframe(self): |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2636 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2637 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2638 # Test the first frame |
2a29bcff60a7
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parents:
18
diff
changeset
|
2639 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2640 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2641 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2642 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2643 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2644 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2645 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2646 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2647 |
2a29bcff60a7
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18
diff
changeset
|
2648 # Test the last frame |
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18
diff
changeset
|
2649 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2650 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2651 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2652 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2653 def test_decode_signed(self): |
2a29bcff60a7
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18
diff
changeset
|
2654 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
2a29bcff60a7
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18
diff
changeset
|
2655 minValue = -2000 |
2a29bcff60a7
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18
diff
changeset
|
2656 maxValue = 4042 |
2a29bcff60a7
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18
diff
changeset
|
2657 |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2658 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2659 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2660 |
2a29bcff60a7
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18
diff
changeset
|
2661 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2662 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2663 |
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18
diff
changeset
|
2664 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2665 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2666 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2667 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2668 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2669 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2670 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2671 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
22 | 2672 |
2673 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2674 def test_googlecode_issue_32(self): |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2675 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2676 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2677 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2678 |
22 | 2679 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
2680 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
2681 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
2682 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
2683 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
2684 | |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2685 # Replay the same test using Latin1 as default encoding: This must fail |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2686 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2687 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2688 DoDelete(_REMOTE, '/instances/%s' % f) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2689 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2690 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2691 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2692 |
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test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2693 |
22 | 2694 def test_encodings(self): |
23 | 2695 # Latin-1 (ISO_IR 100) |
22 | 2696 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
2697 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
2698 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
23 | 2699 |
2700 # Latin-2 (ISO_IR 101) | |
2701 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
2702 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
2703 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
2704 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
2705 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
2706 | |
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2707 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2708 def test_storescu_custom_aet(self): |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2709 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2710 # setting of the local AET during C-Store SCU (both in Lua and |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2711 # in the REST API)." |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2712 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2713 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2714 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2715 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2716 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2717 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2718 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2719 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2720 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2721 'LocalAet' : 'YOP', |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2722 'Resources' : [ a['ID'], b['ID'] ] |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2723 }) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2724 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2725 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2726 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2727 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2728 DropOrthanc(_LOCAL) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2729 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2730 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2731 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2732 'Resources' : [ c['ID'] ] |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2733 }) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2734 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2735 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2736 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2737 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2738 DropOrthanc(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2739 DropOrthanc(_LOCAL) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2740 |
174 | 2741 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2742 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2743 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2744 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2745 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2746 WaitEmpty(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2747 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2748 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2749 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2750 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2751 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2752 WaitEmpty(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2753 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2754 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2755 |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2756 def test_resources_since_limit(self): |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2757 # Upload 16 instances |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2758 for i in range(4): |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2759 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2760 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2761 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2762 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2763 |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2764 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2765 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2766 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2767 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
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diff
changeset
|
2768 |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2769 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2770 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2771 |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2772 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2773 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2774 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2775 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2776 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
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diff
changeset
|
2777 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2778 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2779 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2780 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2781 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2782 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2783 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2784 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2785 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2786 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2787 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2788 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2789 s = {} |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2790 since = 0 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2791 while True: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2792 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2793 if len(t) == 0: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2794 break |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2795 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2796 since += len(t) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2797 for i in t: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2798 s[i] = None |
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parents:
28
diff
changeset
|
2799 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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28
diff
changeset
|
2800 self.assertEqual(16, len(s)) |
1047d7bc5210
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parents:
28
diff
changeset
|
2801 for instance in DoGet(_REMOTE, '/instances'): |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2802 self.assertTrue(instance in s) |
36 | 2803 |
2804 | |
2805 def test_create_pdf(self): | |
2806 # Upload 4 instances | |
2807 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
2808 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
2809 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
2810 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
2811 | |
2812 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
2813 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
2814 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
2815 | |
2816 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
2817 pdf = f.read() | |
2818 | |
2819 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2820 json.dumps({ | |
2821 'Tags' : { | |
2822 'PatientName' : 'Jodogne', | |
2823 'Modality' : 'CT', | |
2824 }, | |
2825 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2826 })) | |
2827 | |
2828 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2829 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
9184e6cb215a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2830 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
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parents:
445
diff
changeset
|
2831 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
36 | 2832 |
2833 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
2834 self.assertEqual(len(b), len(pdf) + 1) | |
2835 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
2836 | |
2837 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
2838 json.dumps({ | |
2839 'Parent' : brainixPatient, | |
2840 'Tags' : { | |
2841 'PatientName' : 'Jodogne', | |
2842 } | |
2843 }))) | |
2844 | |
2845 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2846 json.dumps({ | |
2847 'Parent' : brainixPatient, | |
2848 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
2849 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2850 })) | |
2851 | |
2852 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
2853 | |
2854 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2855 json.dumps({ | |
2856 'Parent' : brainixStudy, | |
2857 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
2858 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2859 })) | |
2860 | |
2861 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
2862 | |
2863 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2864 json.dumps({ | |
2865 'Parent' : brainixEpi, | |
37 | 2866 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
36 | 2867 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
2868 })) | |
2869 | |
2870 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
2871 | |
2872 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
2873 self.assertEqual(len(b), len(pdf)) | |
2874 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
2875 | |
2876 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
38 | 2877 |
2878 | |
2879 def test_create_series(self): | |
2880 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2881 json.dumps({ | |
2882 'Tags' : { | |
40 | 2883 'SpecificCharacterSet' : 'ISO_IR 100', |
2884 'PatientName' : 'Sébastien Jodogne', | |
38 | 2885 'Modality' : 'CT', |
2886 }, | |
2887 'Content' : [ | |
40 | 2888 { |
2889 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
2890 'Tags' : { 'ImageComments' : 'Tutu' } | |
2891 }, | |
38 | 2892 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
2893 ] | |
2894 })) | |
2895 | |
2896 s = DoGet(_REMOTE, i['Path']) | |
2897 self.assertEqual('Series', s['Type']) | |
2898 self.assertEqual(s['ID'], i['ID']) | |
2899 self.assertEqual(2, len(s['Instances'])) | |
39 | 2900 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
2901 self.assertEqual('Complete', s['Status']) | |
40 | 2902 |
2903 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
2904 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
2905 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
2906 if 'ImageComments' in a: | |
2907 self.assertEqual('Tutu', a['ImageComments']) | |
2908 else: | |
2909 self.assertEqual('Tutu', b['ImageComments']) | |
2910 | |
2911 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
2912 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
2913 'Sébastien Jodogne') | |
47 | 2914 |
2915 | |
2916 def test_create_binary(self): | |
2917 binary = ''.join(map(chr, range(256))) | |
2918 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
2919 tags = { | |
2920 'PatientName' : 'Jodogne', | |
2921 '8899-8899' : encoded | |
2922 } | |
2923 | |
2924 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2925 json.dumps({ | |
266 | 2926 'Tags' : tags, |
2927 'PrivateCreator' : 'TestBinary', | |
47 | 2928 })) |
2929 | |
2930 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
2931 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
2932 | |
2933 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2934 json.dumps({ | |
2935 'InterpretBinaryTags' : False, | |
266 | 2936 'Tags' : tags, |
2937 'PrivateCreator' : 'TestBinary', | |
47 | 2938 })) |
2939 | |
2940 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
2941 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
48
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2942 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2943 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2944 def test_patient_ids_collision(self): |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2945 # Upload 3 instances from 3 different studies, but with the |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2946 # same PatientID |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2947 for i in range(3): |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2948 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2949 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2950 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2951 'Query' : { 'PatientName' : '*' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2952 self.assertEqual(1, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2953 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2954 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2955 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2956 'CaseSensitive' : True, |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2957 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2958 self.assertEqual(2, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2959 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2960 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2961 'CaseSensitive' : False, |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2962 'Query' : { 'PatientName' : 'Foo' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2963 self.assertEqual(1, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2964 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2965 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2966 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
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test_patient_ids_collision
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parents:
47
diff
changeset
|
2967 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2968 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2969 'Query' : { 'PatientName' : '*' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2970 self.assertEqual(3, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2971 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2972 self.assertTrue('FOO^SERIES' in d) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2973 self.assertTrue('HELLO^SERIES' in d) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2974 self.assertTrue('WORLD^SERIES' in d) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2975 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2976 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2977 self.assertEqual(1, len(set(d))) |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2978 self.assertEqual('COMMON', d[0]) |
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47
diff
changeset
|
2979 |
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47
diff
changeset
|
2980 for i in a: |
e4352463ff74
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2981 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
e4352463ff74
test_patient_ids_collision
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parents:
47
diff
changeset
|
2982 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2983 self.assertEqual('%s^SERIES' % p, d) |
49
e7f9b8199545
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2984 |
e7f9b8199545
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Sebastien Jodogne <s.jodogne@gmail.com>
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48
diff
changeset
|
2985 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2986 def test_bitbucket_issue_4(self): |
e7f9b8199545
test_bitbucket_issue_4
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48
diff
changeset
|
2987 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2988 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2989 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2990 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2991 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2992 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2993 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2994 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2995 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2996 |
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test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2997 p = DoGet(_REMOTE, '/patients') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2998 self.assertEqual(2, len(p)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2999 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3000 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3001 self.assertEqual(3, len(i1)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3002 self.assertEqual(3, len(i2)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3003 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3004 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3005 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3006 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3007 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3008 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3009 def test_create_sequence(self): |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3010 i = DoPost(_REMOTE, '/tools/create-dicom', |
8de63d56cf11
test_create_sequence
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parents:
49
diff
changeset
|
3011 json.dumps({ |
8de63d56cf11
test_create_sequence
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parents:
49
diff
changeset
|
3012 'Tags' : { |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3013 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3014 'PatientName': 'Jodogne^', |
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3015 'ReferencedStudySequence': GenerateTestSequence(), |
50
8de63d56cf11
test_create_sequence
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49
diff
changeset
|
3016 } |
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test_create_sequence
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diff
changeset
|
3017 }))['ID'] |
8de63d56cf11
test_create_sequence
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parents:
49
diff
changeset
|
3018 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3019 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3020 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3021 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3022 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3023 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3024 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3025 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3026 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3027 def test_modify_sequence(self): |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3028 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3029 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3030 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3031 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3032 json.dumps({ |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3033 "Replace" : { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3034 "PatientName" : "hello", |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3035 'ReferencedStudySequence': GenerateTestSequence(), |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3036 }, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3037 }), |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3038 'application/json') |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3039 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3040 DoDelete(_REMOTE, '/instances/%s' % i) |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3041 |
52 | 3042 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
3043 | |
3044 | |
3045 def test_compression(self): | |
3046 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
3047 | |
380
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parents:
379
diff
changeset
|
3048 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
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379
diff
changeset
|
3049 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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379
diff
changeset
|
3050 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
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379
diff
changeset
|
3051 self.assertEqual(1, len(aa)) |
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parents:
379
diff
changeset
|
3052 self.assertTrue('dicom' in aa) |
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diff
changeset
|
3053 else: |
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parents:
379
diff
changeset
|
3054 self.assertEqual(2, len(aa)) |
b9adc7d06347
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parents:
379
diff
changeset
|
3055 self.assertTrue('dicom' in aa) |
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parents:
379
diff
changeset
|
3056 self.assertTrue('dicom-as-json' in aa) |
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379
diff
changeset
|
3057 |
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379
diff
changeset
|
3058 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
b9adc7d06347
update tests following removal of dicom-as-json attachments
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diff
changeset
|
3059 |
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379
diff
changeset
|
3060 # If "StorageCompression" is enabled in the Orthanc to be |
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diff
changeset
|
3061 # tested, uncompress the attachment before running the test |
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379
diff
changeset
|
3062 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3063 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
52 | 3064 |
380
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3065 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3066 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3067 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3068 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3069 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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diff
changeset
|
3070 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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diff
changeset
|
3071 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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diff
changeset
|
3072 |
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diff
changeset
|
3073 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
52 | 3074 self.assertTrue('compress' in ops) |
3075 self.assertTrue('uncompress' in ops) | |
3076 self.assertTrue('is-compressed' in ops) | |
380
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diff
changeset
|
3077 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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diff
changeset
|
3078 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
3079 |
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diff
changeset
|
3080 # Re-compress the attachment |
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diff
changeset
|
3081 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
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diff
changeset
|
3082 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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diff
changeset
|
3083 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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changeset
|
3084 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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diff
changeset
|
3085 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
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changeset
|
3086 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
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changeset
|
3087 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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changeset
|
3088 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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|
3089 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3090 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
3091 |
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diff
changeset
|
3092 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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changeset
|
3093 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
3094 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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3095 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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3096 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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3097 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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3098 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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3099 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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3100 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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3101 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
53 | 3102 |
3103 | |
3104 def test_ordered_slices(self): | |
3105 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
3106 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
3107 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
3108 self.assertEqual('Sequence', o['Type']) | |
3109 self.assertEqual(1, len(o['Dicom'])) | |
3110 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
3111 self.assertEqual(76, len(o['Slices'])) | |
3112 for j in range(76): | |
3113 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
3114 | |
68 | 3115 self.assertEqual(1, len(o['SlicesShort'])) |
3116 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
3117 self.assertEqual(0, o['SlicesShort'][0][1]) | |
3118 self.assertEqual(76, o['SlicesShort'][0][2]) | |
3119 | |
53 | 3120 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
3121 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
3122 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
3123 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
3124 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
3125 | |
3126 self.assertEqual('Volume', o['Type']) | |
3127 self.assertEqual(3, len(o['Dicom'])) | |
3128 self.assertEqual(3, len(o['Slices'])) | |
3129 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
3130 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
3131 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
3132 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
3133 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
3134 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
3135 | |
68 | 3136 self.assertEqual(3, len(o['SlicesShort'])) |
3137 self.assertEqual(k, o['SlicesShort'][0][0]) | |
3138 self.assertEqual(0, o['SlicesShort'][0][1]) | |
3139 self.assertEqual(1, o['SlicesShort'][0][2]) | |
3140 self.assertEqual(j, o['SlicesShort'][1][0]) | |
3141 self.assertEqual(0, o['SlicesShort'][1][1]) | |
3142 self.assertEqual(1, o['SlicesShort'][1][2]) | |
3143 self.assertEqual(i, o['SlicesShort'][2][0]) | |
3144 self.assertEqual(0, o['SlicesShort'][2][1]) | |
3145 self.assertEqual(1, o['SlicesShort'][2][2]) | |
3146 | |
53 | 3147 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
3148 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
3149 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
3150 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
3151 | |
3152 self.assertEqual('Sequence', o['Type']) | |
3153 self.assertEqual(2, len(o['Dicom'])) | |
3154 self.assertEqual(2, len(o['Slices'])) | |
3155 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
3156 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
3157 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
3158 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
54
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3159 |
68 | 3160 self.assertEqual(2, len(o['SlicesShort'])) |
3161 self.assertEqual(i, o['SlicesShort'][0][0]) | |
3162 self.assertEqual(0, o['SlicesShort'][0][1]) | |
3163 self.assertEqual(1, o['SlicesShort'][0][2]) | |
3164 self.assertEqual(j, o['SlicesShort'][1][0]) | |
3165 self.assertEqual(0, o['SlicesShort'][1][1]) | |
3166 self.assertEqual(1, o['SlicesShort'][1][2]) | |
3167 | |
3168 | |
54
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3169 |
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test_incoming_movescu_accession
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3170 def test_incoming_movescu_accession(self): |
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test_incoming_movescu_accession
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3171 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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3172 |
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3173 # No matching patient, so no job is created |
54
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3174 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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3175 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
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3176 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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3177 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
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3178 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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3179 |
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3180 # 1 Matching patient, track the job |
138 | 3181 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
3182 '--study', | |
3183 '-k', '0008,0052=STUDY', | |
3184 '-k', 'AccessionNumber=A10003245599' | |
3185 ]))) | |
137
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3186 |
54
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3187 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
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3188 |
55 | 3189 |
3190 def test_dicom_to_json(self): | |
3191 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
60
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3192 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
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3193 |
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3194 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
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3195 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
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3196 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
123 | 3197 # Tags for compatibility with DCMTK 3.6.0 |
3198 'RETIRED_OtherPatientIDs', | |
3199 'OtherPatientIDs', | |
3200 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
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3201 ])) |
55 | 3202 |
3203 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
3204 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
87
4b24faec842b
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diff
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3205 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
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3206 ])) |
55 | 3207 |
60
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3208 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
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3209 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
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3210 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
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3211 ])) |
60
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3212 |
372
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3213 |
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3214 # NB: To get the actual value of the "tags" JSON file, use the |
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3215 # following command: |
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3216 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
60
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3217 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
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|
3218 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
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3219 a = json.loads(f.read()) |
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3220 |
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3221 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
380
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3222 # reports are truncated starting with PixelData |
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3223 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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3224 self.assertFalse('7fe1,0010' in t) |
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3225 self.assertFalse('7fe1,1001' in t) |
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3226 del a['7fe1,0010'] |
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3227 del a['7fe1,1001'] |
380
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3228 else: |
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3229 self.assertTrue('7fe1,0010' in t) |
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3230 self.assertTrue('7fe1,1001' in t) |
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3231 |
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3232 aa = json.dumps(a).replace('2e+022', '2e+22') |
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3233 tt = (json.dumps(t) |
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3234 .replace('2e+022', '2e+22') |
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3235 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
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3236 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
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3237 self.assertEqual(aa, tt) |
57 | 3238 |
3239 | |
3240 def test_batch_archive(self): | |
3241 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
3242 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
3243 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
3244 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
3245 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
3246 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
3247 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
3248 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
3249 | |
3250 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
3251 z = zipfile.ZipFile(StringIO(s), "r") | |
3252 self.assertEqual(0, len(z.namelist())) | |
3253 | |
3254 # One patient | |
3255 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
3256 z = zipfile.ZipFile(StringIO(s), "r") | |
3257 self.assertEqual(4, len(z.namelist())) | |
3258 | |
3259 # One patient + twice its study + one series from other patient | |
3260 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
3261 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
3262 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
3263 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
3264 ]) | |
3265 z = zipfile.ZipFile(StringIO(s), "r") | |
3266 self.assertEqual(6, len(z.namelist())) | |
3267 | |
3268 # One patient + one series + one instance | |
3269 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
3270 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
3271 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
3272 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
3273 ]) | |
3274 z = zipfile.ZipFile(StringIO(s), "r") | |
3275 self.assertEqual(7, len(z.namelist())) | |
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3276 |
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3277 |
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3278 def test_decode_brainix_as_jpeg(self): |
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3279 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
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|
3280 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3281 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3282 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3283 self.assertEqual(j.size[0], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3284 self.assertEqual(j.size[1], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3285 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3286 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3287 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3288 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3289 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3290 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3291 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3292 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3293 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3294 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3295 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3296 self.assertEqual('JPEG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3297 self.assertEqual(j.size[0], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3298 self.assertEqual(j.size[1], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3299 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3300 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3301 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3302 self.assertLess(a, b) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3303 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3304 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3305 self.assertEqual('JPEG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3306 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3307 # 16bit encoding is not supported with JPEG |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3308 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3309 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3310 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3311 # No matching content type |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3312 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3313 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3314 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3315 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3316 def test_media_encodings(self): |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3317 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3318 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3319 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3320 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3321 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3322 z = zipfile.ZipFile(StringIO(tmp), "r") |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3323 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3324 self.assertEqual(4, len(z.namelist())) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3325 self.assertTrue('IMAGES/IM0' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3326 self.assertTrue('IMAGES/IM1' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3327 self.assertTrue('IMAGES/IM2' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3328 self.assertTrue('DICOMDIR' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3329 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3330 try: |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3331 os.remove('/tmp/DICOMDIR') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3332 except: |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3333 # The file does not exist |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3334 pass |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3335 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3336 z.extract('DICOMDIR', '/tmp') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3337 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3338 stderr = subprocess.STDOUT).split('\n') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3339 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3340 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3341 stderr = subprocess.STDOUT).split('\n') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3342 self.assertEqual(1, len(a)) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3343 self.assertEqual('', a[0]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3344 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3345 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3346 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3347 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3348 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3349 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3350 os.remove('/tmp/DICOMDIR') |
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3351 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3352 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3353 def test_findscu_counters(self): |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3354 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3355 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3356 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3357 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3358 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3359 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3360 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3361 self.assertTrue('1 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3362 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3363 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3364 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3365 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3366 self.assertTrue('2 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3367 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3368 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3369 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3370 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3371 self.assertTrue('3 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3372 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3373 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3374 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3375 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3376 self.assertTrue('2 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3377 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3378 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3379 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3380 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3381 self.assertTrue('3 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3382 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3383 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
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3384 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
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3385 self.assertEqual(2, len(s)) |
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3386 self.assertTrue('1 ' in s) |
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3387 self.assertTrue('2 ' in s) |
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3388 |
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3389 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
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3390 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
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3391 self.assertEqual(1, len(s)) |
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3392 t = map(lambda x: x.strip(), s[0].split('\\')) |
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3393 self.assertTrue('PT' in t) |
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3394 self.assertTrue('CT' in t) |
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3395 |
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3396 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
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3397 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
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3398 self.assertEqual(1, len(s)) |
176
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3399 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
71
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3400 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
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3401 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
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3402 |
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3403 |
78
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3404 def test_decode_transfer_syntax(self): |
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3405 def Check(t, md5): |
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3406 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
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3407 |
89
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3408 if t != '1.2.840.10008.1.2': # This file has no meta header |
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3409 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
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3410 self.assertEqual(t, transferSyntax) |
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3411 |
78
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3412 if md5 == None: |
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3413 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
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3414 else: |
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3415 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
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3416 self.assertEqual(m, md5) |
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3417 |
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3418 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
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3419 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
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3420 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
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3421 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
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3422 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
384 | 3423 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
3424 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
3425 | |
3426 # The 3 checks below don't work on big-endian | |
3427 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
78
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3428 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
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3429 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
299
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3430 |
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3431 # JPEG2k image, not supported without GDCM plugin |
304 | 3432 if not HasGdcmPlugin(_REMOTE): |
299
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3433 Check('1.2.840.10008.1.2.4.90', None) |
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3434 Check('1.2.840.10008.1.2.4.91', None) |
79 | 3435 |
3436 | |
3437 def test_raw_frame(self): | |
3438 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
3439 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3440 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3441 self.assertEqual(512 * 512 * 2, len(a)) | |
3442 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
3443 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
3444 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
3445 | |
3446 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
3447 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3448 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
3449 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
3450 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
3451 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3452 self.assertEqual("L", im.mode) | |
3453 self.assertEqual(512, im.size[0]) | |
3454 self.assertEqual(512, im.size[1]) | |
3455 | |
3456 # Test an image with 2 JPEG frames spread over multiple fragments | |
3457 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
3458 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3459 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3460 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
3461 self.assertEqual(69214, len(a)) | |
3462 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
3463 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
3464 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3465 self.assertEqual("RGB", im.mode) | |
3466 self.assertEqual(512, im.size[0]) | |
3467 self.assertEqual(512, im.size[1]) | |
323 | 3468 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
79 | 3469 self.assertEqual("RGB", im.mode) |
3470 self.assertEqual(512, im.size[0]) | |
3471 self.assertEqual(512, im.size[1]) | |
81 | 3472 |
3473 | |
3474 | |
3475 def test_rest_movescu(self): | |
3476 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3477 | |
3478 # Upload 4 instances | |
3479 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
3480 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
3481 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
3482 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
3483 | |
3484 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
3485 for p in DoGet(_REMOTE, '/patients'): | |
3486 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
3487 DoDelete(_REMOTE, '/patients/%s' % p) | |
3488 | |
3489 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3490 | |
482
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3491 # Move instance Brainix/Flair/IM-0001-0001.dcm |
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3492 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
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3493 'Level' : 'Instance', |
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|
3494 'Resources' : [ |
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|
3495 { |
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3496 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
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3497 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
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3498 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
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3499 } |
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|
3500 ]}) |
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3501 |
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3502 # Move series Brainix/Flair/* |
81 | 3503 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
3504 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3505 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
3506 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
3507 | |
482
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3508 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
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3509 # Reset and test asynchronous C-Move at instance level |
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3510 for p in DoGet(_REMOTE, '/patients'): |
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3511 DoDelete(_REMOTE, '/patients/%s' % p) |
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3512 |
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3513 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
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3514 'Level' : 'Instance', |
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3515 'Resources' : [ |
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3516 { |
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3517 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
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3518 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
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3519 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
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3520 } |
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3521 ], |
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3522 'Asynchronous': True |
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3523 }) |
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3524 |
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3525 job = MonitorJob2(_REMOTE, lambda: DoPost |
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3526 (_REMOTE, '/modalities/orthanctest/move', { |
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3527 'Level' : 'Instance', |
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|
3528 'Resources' : [ |
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3529 { |
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3530 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
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3531 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
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3532 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
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3533 } |
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3534 ], |
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3535 'Asynchronous': True |
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3536 })) |
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3537 |
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3538 self.assertNotEqual(None, job) |
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3539 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3540 # check the job was successfull |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3541 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3542 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3543 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3544 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3545 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3546 # check the job content |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3547 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3548 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3549 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3550 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3551 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3552 # Reset and test synchronous C-Move at series level |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3553 for p in DoGet(_REMOTE, '/patients'): |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3554 DoDelete(_REMOTE, '/patients/%s' % p) |
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3555 |
81 | 3556 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
3557 'Resources' : [ | |
3558 { | |
3559 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3560 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
3561 } | |
3562 ]}) | |
3563 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
3564 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3565 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
3566 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
3567 | |
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3568 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3569 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3570 for p in DoGet(_REMOTE, '/patients'): |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3571 DoDelete(_REMOTE, '/patients/%s' % p) |
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3572 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3573 job = MonitorJob2(_REMOTE, lambda: DoPost |
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3574 (_REMOTE, '/modalities/orthanctest/move', { |
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3575 'Level' : 'Series', |
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3576 'Resources' : [ |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3577 { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3578 'PatientID' : '5Yp0E', |
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added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3579 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3580 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3581 } |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3582 ], |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3583 'Asynchronous': True |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3584 })) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3585 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3586 self.assertNotEqual(None, job) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3587 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3588 # check the job was successfull |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3589 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3590 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3591 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3592 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3593 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3594 # check the job content |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3595 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3596 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3597 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3598 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3599 |
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3600 # Move series Brainix/Epi/* |
81 | 3601 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
3602 'Resources' : [ | |
3603 { | |
3604 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3605 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
3606 } | |
3607 ]}) | |
3608 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
3609 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3610 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
3611 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
3612 | |
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3613 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3614 # Move study Knee asynchronously |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3615 job = MonitorJob2(_REMOTE, lambda: DoPost |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3616 (_REMOTE, '/modalities/orthanctest/move', { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3617 'Level' : 'Study', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3618 'Resources' : [ |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3619 { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3620 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3621 } |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3622 ], |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3623 'Asynchronous': True |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3624 })) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3625 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3626 self.assertNotEqual(None, job) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3627 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3628 # check the job was successfull |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3629 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3630 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3631 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3632 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3633 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3634 # check the job content |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3635 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3636 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
81 | 3637 |
3638 # Reset | |
3639 for p in DoGet(_REMOTE, '/patients'): | |
3640 DoDelete(_REMOTE, '/patients/%s' % p) | |
3641 | |
3642 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3643 | |
3644 | |
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3645 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3646 # Move all at once asynchronously at PatientLevel |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3647 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3648 { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3649 'Level' : 'Patient', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3650 'Resources' : [ |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3651 { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3652 'PatientID' : '5Yp0E', |
81 | 3653 }, |
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3654 { |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3655 'PatientID': '887', |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3656 'PatientName' : 'KNEE', |
81 | 3657 } |
482
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3658 ], |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3659 'Synchronous': False |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3660 })) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3661 |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3662 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3663 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3664 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3665 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
81 | 3666 |
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
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83
diff
changeset
|
3667 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3668 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3669 def test_reconstruct_json(self): |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3670 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3671 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3672 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3673 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3674 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3675 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
380
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3676 |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3677 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3678 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3679 else: |
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3680 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3681 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3682 # Cannot delete the "DICOM" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3683 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3684 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3685 # Can delete the "DICOM as JSON" attachment |
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3686 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3687 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3688 self.assertTrue(type(r) is dict and len(r) == 0) |
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3689 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3690 # Only the "DICOM" attachment subsists |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3691 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3692 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3693 # Cannot manually reconstruct the "DICOM as JSON" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3694 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3695 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3696 # Transparently reconstruct the "DICOM as JSON" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3697 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3698 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3699 self.assertEqual(str(first), str(second)) |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3700 |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3701 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3702 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3703 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3704 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3705 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3706 self.assertEqual(str(first), str(third)) |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3707 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3708 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3709 def test_reconstruct_json2(self): |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3710 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3711 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3712 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3713 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3714 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3715 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3716 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3717 |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3718 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3719 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3720 |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3721 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3722 self.assertEqual(2, len(aa)) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3723 self.assertEqual(aa, bb) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3724 self.assertTrue('dicom' in aa) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3725 self.assertTrue('dicom-as-json' in aa) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3726 elif IsDicomUntilPixelDataStored(_REMOTE): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3727 self.assertEqual(2, len(aa)) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3728 self.assertEqual(aa, bb) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3729 self.assertTrue('dicom' in aa) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3730 self.assertTrue('dicom-until-pixel-data' in aa) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3731 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3732 self.assertEqual(1, len(aa)) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3733 self.assertEqual(aa, bb) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3734 self.assertTrue('dicom' in aa) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3735 |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3736 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3737 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3738 |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3739 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3740 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3741 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3742 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3743 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3744 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3745 |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3746 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3747 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3748 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3749 |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3750 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3751 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3752 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3753 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3754 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3755 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3756 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3757 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3758 def test_private_tags(self): |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3759 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3760 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3761 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3762 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3763 |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3764 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3765 def test_findscu_encoding(self): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3766 # Check out ../Database/Encodings/Generate.sh |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3767 TEST = u'Test-éüäöòДΘĝדصķћ๛ネİ' |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3768 ENCODINGS = { |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3769 'Arabic' : [ 'ISO_IR 127' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3770 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3771 'Cyrillic' : [ 'ISO_IR 144' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3772 'Greek' : [ 'ISO_IR 126' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3773 'Hebrew' : [ 'ISO_IR 138' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3774 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3775 'Latin1' : [ 'ISO_IR 100' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3776 'Latin2' : [ 'ISO_IR 101' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3777 'Latin3' : [ 'ISO_IR 109' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3778 'Latin4' : [ 'ISO_IR 110' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3779 'Latin5' : [ 'ISO_IR 148' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3780 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3781 'Utf8' : [ 'ISO_IR 192' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3782 } |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3783 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3784 for name in ENCODINGS.iterkeys(): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3785 if len(ENCODINGS[name]) == 1: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3786 ENCODINGS[name].append(name.lower()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3787 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3788 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3789 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3790 for name in ENCODINGS.iterkeys(): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3791 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3792 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3793 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3794 i = CallFindScu([ '-k', '0008,0052=STUDY', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3795 '-k', 'SpecificCharacterSet', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3796 '-k', 'PatientName' ]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3797 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3798 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3799 self.assertEqual(1, len(characterSet)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3800 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3801 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3802 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3803 self.assertEqual(1, len(patientName)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3804 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3805 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3806 self.assertEqual(expected, patientName[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3807 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3808 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3809 #for master in ENCODINGS: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3810 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3811 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3812 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3813 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3814 for name in ENCODINGS: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3815 DropOrthanc(_REMOTE) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3816 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3817 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3818 i = CallFindScu([ '-k', '0008,0052=STUDY', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3819 '-k', 'PatientID', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3820 '-k', 'SpecificCharacterSet', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3821 '-k', 'PatientName' ]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3822 i = i.decode(ENCODINGS[master][1]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3823 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3824 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3825 self.assertEqual(1, len(characterSet)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3826 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3827 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3828 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3829 self.assertEqual(1, len(patientId)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3830 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3831 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3832 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3833 self.assertEqual(1, len(patientName)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3834 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3835 tmp = ENCODINGS[name][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3836 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3837 tmp = ENCODINGS[master][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3838 expected = expected.encode(tmp, 'ignore').decode(tmp) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3839 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3840 self.assertEqual(expected, patientName[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3841 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3842 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3843 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3844 'Level' : 'Study', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3845 'Query' : { }}) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3846 self.assertEqual(1, len(a)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3847 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3848 tmp = ENCODINGS[name][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3849 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3850 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3851 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3852 def test_reconstruct(self): |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3853 def CompareMainDicomTag(expected, instance, level, tag): |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3854 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3855 |
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3856 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3857 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3858 studies = DoGet(_REMOTE, '/studies/') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3859 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3860 self.assertEqual(1, len(studies)) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3861 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3862 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3863 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3864 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3865 "Replace" : { |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3866 "StudyDescription" : "hello", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3867 "SeriesDescription" : "world", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3868 "SOPClassUID" : "test", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3869 "SOPInstanceUID" : "myid", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3870 }, |
119 | 3871 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
3872 "Force" : True | |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3873 }) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3874 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3875 instances = DoGet(_REMOTE, '/instances/') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3876 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3877 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3878 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3879 self.assertEqual(2, len(instances)) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3880 |
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3881 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3882 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3883 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3884 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3885 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3886 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3887 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3888 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3889 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3890 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3891 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3892 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3893 # metadata before reconstruct |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3894 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3895 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3896 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3897 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3898 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3899 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3900 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3901 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3902 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3903 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3904 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3905 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3906 # metadata after reconstruct should have been preserved |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3907 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3908 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3909 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3910 self.assertEqual(mba, maa) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3911 self.assertEqual(mbb, mab) |
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3912 |
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3913 |
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
3914 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
104 | 3915 def test_httpClient_lua(self): |
496 | 3916 retries = 4 |
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3917 result = '' |
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3918 |
104 | 3919 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
496 | 3920 scriptContent = f.read() |
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3921 # retry since this test sometimes fails if httpbin.org is unresponsive |
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3922 while retries > 0 and not ('OK' in result): |
496 | 3923 print("Executing lua script HttpClient.lua") |
3924 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3925 retries -= 1 |
102 | 3926 |
3927 self.assertIn('OK', result) | |
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3928 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3929 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3930 def test_bitbucket_issue_44(self): |
319 | 3931 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3932 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3933 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3934 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3935 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3936 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3937 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3938 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3939 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3940 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3941 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3942 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3943 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3944 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3945 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3946 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3947 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3948 self.assertEqual("L", im.mode) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3949 self.assertEqual(2010, im.size[0]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3950 self.assertEqual(2446, im.size[1]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3951 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3952 # This is the chest image, with MONOCHROME1. Raw background is |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3953 # white (255), should be rendered as black (0) => invert |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3954 if i == monochrome1_jpeg: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3955 # Add some tolerance because of JPEG destructive compression |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3956 self.assertGreater(10, im.getpixel((0,0))) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3957 else: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3958 self.assertEqual(0, im.getpixel((0,0))) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3959 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3960 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3961 self.assertEqual("L", im.mode) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3962 self.assertEqual(1572, im.size[0]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3963 self.assertEqual(2010, im.size[1]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3964 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3965 # This is the key image, with MONOCHROME2. Raw background is |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3966 # white (255), should be rendered as white (255) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3967 self.assertEqual(255, im.getpixel((0,0))) |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3968 |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3969 |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3970 def test_bitbucket_issue_42(self): |
319 | 3971 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
123 | 3972 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3973 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3974 modified = DoPost(_REMOTE, |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3975 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
119 | 3976 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3977 'application/json') |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3978 self.assertTrue('PatientID' in modified) |
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3979 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3980 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3981 def test_rest_find_limit(self): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3982 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
319 | 3983 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3984 |
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3985 # Upload 6 instances |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3986 brainix = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3987 knee = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3988 for i in range(2): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3989 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3990 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3991 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3992 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3993 # Check using BRAINIX |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3994 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3995 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3996 'Limit' : 10 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3997 self.assertEqual(4, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3998 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3999 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4000 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4001 'Limit' : 4 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4002 self.assertEqual(4, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4003 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4004 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4005 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4006 'Since' : 2, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4007 'Limit' : 4 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4008 self.assertEqual(2, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4009 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4010 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4011 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4012 'Limit' : 3 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4013 self.assertEqual(3, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4014 |
3e5934363e76
test_rest_find_limitµ
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parents:
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diff
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|
4015 b = [] |
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4016 for i in range(4): |
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4017 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
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|
4018 'Query' : { 'PatientName' : 'B*' }, |
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|
4019 'Limit' : 1, |
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changeset
|
4020 'Since' : i }) |
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4021 self.assertEqual(1, len(a)) |
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4022 b.append(a[0]) |
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|
4023 |
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changeset
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4024 # Check whether the two sets are equal through symmetric difference |
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4025 self.assertEqual(0, len(set(b) ^ set(brainix))) |
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changeset
|
4026 |
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changeset
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4027 # Check using KNEE |
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4028 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
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diff
changeset
|
4029 'Query' : { 'PatientName' : 'K*' }, |
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changeset
|
4030 'Limit' : 10 }) |
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changeset
|
4031 self.assertEqual(2, len(a)) |
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changeset
|
4032 |
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changeset
|
4033 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
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changeset
|
4034 'Query' : { 'PatientName' : 'K*' }, |
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changeset
|
4035 'Limit' : 2 }) |
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changeset
|
4036 self.assertEqual(2, len(a)) |
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changeset
|
4037 |
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changeset
|
4038 b = [] |
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changeset
|
4039 for i in range(2): |
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4040 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
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4041 'Query' : { 'PatientName' : 'K*' }, |
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4042 'Limit' : 1, |
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changeset
|
4043 'Since' : i }) |
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4044 self.assertEqual(1, len(a)) |
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4045 b.append(a[0]) |
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|
4046 |
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4047 self.assertEqual(0, len(set(b) ^ set(knee))) |
115
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|
4048 |
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diff
changeset
|
4049 |
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4050 def test_bitbucket_issue_46(self): |
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4051 # "PHI remaining after anonymization" |
319 | 4052 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
115
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|
4053 |
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4054 def GetAnonymizedTags(study, version): |
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4055 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
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4056 { 'DicomVersion' : version }, |
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4057 'application/json') ['ID'] |
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4058 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
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4059 self.assertEqual(1, len(a)) |
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|
4060 |
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|
4061 instance = a[0]['ID'] |
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diff
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|
4062 |
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4063 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
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|
4064 |
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4065 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
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4066 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
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|
4067 |
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|
4068 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
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diff
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4069 # (Patient's Mother's Birth Name) tags |
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4070 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
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4071 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
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|
4072 'application/json')['ID'] |
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diff
changeset
|
4073 |
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diff
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|
4074 # Use Table E.1-1 from PS 3.15-2008 |
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4075 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
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|
4076 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
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|
4077 self.assertTrue('0032,1033' in tags) |
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|
4078 self.assertTrue('0010,1060' in tags) |
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diff
changeset
|
4079 |
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diff
changeset
|
4080 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
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4081 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
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4082 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
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4083 self.assertFalse('0032,1033' in tags) |
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|
4084 self.assertFalse('0010,1060' in tags) |
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diff
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|
4085 |
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|
4086 t = {} |
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changeset
|
4087 for (key, value) in tags.iteritems(): |
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4088 t[value['Name']] = value['Value'] |
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diff
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|
4089 |
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changeset
|
4090 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
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|
4091 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
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|
4092 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
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|
4093 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
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|
4094 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
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|
4095 |
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diff
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|
4096 with tempfile.NamedTemporaryFile(delete = True) as f: |
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|
4097 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
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|
4098 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
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|
4099 f.flush() |
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|
4100 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
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|
4101 stderr = subprocess.STDOUT).split('\n') |
118
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|
4102 |
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diff
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|
4103 |
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|
4104 def test_bitbucket_issue_55(self): |
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4105 def Run(modify, query): |
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4106 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
4107 |
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|
4108 operation = 'modify' if modify else 'anonymize' |
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|
4109 |
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|
4110 self.assertRaises(Exception, lambda: DoPost( |
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4111 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
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4112 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
4113 |
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|
4114 query["Force"] = True |
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|
4115 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
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4116 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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4117 DoDelete(_REMOTE, a) |
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|
4118 |
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|
4119 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
4120 |
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|
4121 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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|
4122 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
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|
4123 |
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|
4124 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
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|
4125 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
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changeset
|
4126 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4127 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4128 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4129 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4130 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4131 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4132 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4133 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4134 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4135 |
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4136 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4137 def test_bitbucket_issue_56(self): |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4138 # Case-insensitive matching over accents. This test assumes |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4139 # that the "CaseSensitivePN" configuration option of Orthanc |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4140 # is set to "false" (default value). |
319 | 4141 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4142 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4143 def Check(name, expected, expectedSensitive): |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4144 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4145 '-k', '0008,0052=PATIENT', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4146 '-k', 'PatientName=%s' % name ]) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4147 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4148 self.assertEqual(expected, len(patientNames)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4149 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4150 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4151 'CaseSensitive' : False, |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4152 'Query' : { 'PatientName' : name }}) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4153 self.assertEqual(expected, len(a)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4154 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4155 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4156 'CaseSensitive' : True, |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4157 'Query' : { 'PatientName' : name }}) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4158 self.assertEqual(expectedSensitive, len(a)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4159 |
533 | 4160 # SpecificCharacterSet = ISO_IR 100 (Latin1), PatientName=Test-éüäöò |
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4161 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4162 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4163 # WildcardConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4164 Check('TeSt*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4165 Check('TeSt-a*', 0, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4166 Check('TeSt-É*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4167 Check('TeSt-é*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4168 Check('Test-é*', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4169 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4170 # ListConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4171 Check('Test-éüäöò\\nope', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4172 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4173 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4174 # ValueConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4175 Check('Test-éüäöò', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4176 Check('Test-ÉÜÄÖÒ', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4177 |
125 | 4178 |
4179 def test_gbk_alias(self): | |
4180 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
4181 # This test fails on Orthanc <= 1.3.0 | |
4182 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
4183 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
4184 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
4185 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
126 | 4186 |
4187 | |
4188 def test_long_tag(self): | |
4189 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
4190 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
4191 | |
4192 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
4193 self.assertTrue('0018,1020' in tags) | |
4194 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
4195 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
4196 self.assertEqual(None, tags['0018,1020']['Value']) | |
4197 | |
4198 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
4199 self.assertTrue('0018,1020' in tags) | |
4200 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
4201 self.assertEqual('String', tags['0018,1020']['Type']) | |
4202 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
4203 | |
4204 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
4205 self.assertTrue('SoftwareVersions' in tags) | |
4206 self.assertEqual(None, tags['SoftwareVersions']) | |
4207 self.assertTrue('HeartRate' in tags) | |
4208 self.assertEqual(474, int(tags['HeartRate'])) | |
4209 | |
4210 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
4211 self.assertTrue('SoftwareVersions' in tags) | |
4212 self.assertEqual(None, tags['SoftwareVersions']) | |
4213 | |
4214 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
4215 self.assertTrue('SoftwareVersions' in tags) | |
4216 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
4217 | |
4218 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
4219 self.assertTrue('SoftwareVersions' in tags) | |
4220 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
4221 | |
4222 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
4223 self.assertEqual(1, len(tags)) | |
4224 self.assertTrue(i in tags.keys()) | |
4225 self.assertTrue('0018,1020' in tags[i]) | |
4226 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
4227 | |
4228 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
4229 self.assertEqual(1, len(tags)) | |
4230 self.assertTrue(i in tags.keys()) | |
4231 self.assertTrue('0018,1020' in tags[i]) | |
4232 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
4233 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
4234 | |
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4235 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4236 def test_extended_media(self): |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4237 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4238 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4239 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4240 self.assertEqual(2, len(z.namelist())) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4241 self.assertTrue('IMAGES/IM0' in z.namelist()) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4242 self.assertTrue('DICOMDIR' in z.namelist()) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4243 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4244 try: |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4245 os.remove('/tmp/DICOMDIR') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4246 except: |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4247 # The file does not exist |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4248 pass |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4249 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4250 z.extract('DICOMDIR', '/tmp') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4251 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4252 stderr = subprocess.STDOUT).split('\n') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4253 self.assertEqual(5, len(a)) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4254 self.assertTrue(a[0].startswith('Warning')) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4255 self.assertEqual('BasicDirectory', a[1]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4256 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4257 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4258 self.assertEqual('', a[4]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4259 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4260 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4261 stderr = subprocess.STDOUT).split('\n') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4262 self.assertEqual(1, len(a)) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4263 self.assertEqual('', a[0]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4264 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4265 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4266 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4267 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4268 # Check the presence of the series description (extended tag) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4269 self.assertTrue(re.search('T1W_aTSE', a) != None) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4270 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4271 os.remove('/tmp/DICOMDIR') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4272 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4273 |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4274 def test_anonymize_relationships_1(self): |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4275 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4276 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4277 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4278 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4279 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4280 '{}', |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4281 'application/json')['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4282 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4283 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4284 self.assertEqual(2, len(a)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4285 a1 = a[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4286 a2 = a[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4287 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4288 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4289 self.assertEqual(2, len(b)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4290 b1 = b[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4291 b2 = b[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4292 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4293 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4294 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4295 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4296 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4297 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4298 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4299 DoGet(_REMOTE, FRAME % a2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4300 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4301 DoGet(_REMOTE, FRAME % b2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4302 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4303 DoGet(_REMOTE, FRAME % b1)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4304 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4305 DoGet(_REMOTE, FRAME % b2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4306 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4307 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4308 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4309 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4310 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4311 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4312 for i in range(3): |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4313 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4314 DoGet(_REMOTE, SOP % (a2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4315 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4316 DoGet(_REMOTE, SOP % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4317 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4318 DoGet(_REMOTE, SOP % (b1, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4319 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4320 DoGet(_REMOTE, SOP % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4321 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4322 DoGet(_REMOTE, CLASS % (b1, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4323 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4324 DoGet(_REMOTE, CLASS % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4325 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4326 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4327 def test_anonymize_relationships_2(self): |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4328 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4329 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4330 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4331 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4332 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4333 '{}', |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4334 'application/json')['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4335 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4336 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4337 self.assertEqual(2, len(a)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4338 a1 = a[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4339 a2 = a[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4340 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4341 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4342 self.assertEqual(2, len(b)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4343 b1 = b[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4344 b2 = b[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4345 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4346 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4347 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4348 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4349 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4350 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4351 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4352 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4353 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4354 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4355 DoGet(_REMOTE, SOP % (a2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4356 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4357 DoGet(_REMOTE, SOP % (b2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4358 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4359 DoGet(_REMOTE, SOP % (b1, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4360 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4361 DoGet(_REMOTE, SOP % (b2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4362 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4363 DoGet(_REMOTE, CLASS % (b1, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4364 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4365 DoGet(_REMOTE, CLASS % (b2, 0))) |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4366 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4367 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4368 def test_anonymize_relationships_3(self): |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4369 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4370 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4371 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4372 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4373 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4374 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4375 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
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4376 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
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4377 self.assertEqual(2, len(a)) |
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|
4378 |
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diff
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|
4379 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
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diff
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|
4380 sr2 = a[0]['ID'] |
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changeset
|
4381 mr2 = a[1]['ID'] |
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diff
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|
4382 else: |
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changeset
|
4383 sr2 = a[1]['ID'] |
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changeset
|
4384 mr2 = a[0]['ID'] |
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diff
changeset
|
4385 |
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changeset
|
4386 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
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diff
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4387 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
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changeset
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4388 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
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diff
changeset
|
4389 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
f0d4c4707e64
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diff
changeset
|
4390 |
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diff
changeset
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4391 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
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changeset
|
4392 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
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4393 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
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diff
changeset
|
4394 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
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changeset
|
4395 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
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diff
changeset
|
4396 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
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diff
changeset
|
4397 |
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diff
changeset
|
4398 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
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|
4399 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
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|
4400 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
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|
4401 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
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diff
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|
4402 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
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diff
changeset
|
4403 |
f0d4c4707e64
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diff
changeset
|
4404 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
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diff
changeset
|
4405 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
f0d4c4707e64
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diff
changeset
|
4406 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
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diff
changeset
|
4407 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
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diff
changeset
|
4408 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
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diff
changeset
|
4409 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
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diff
changeset
|
4410 |
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diff
changeset
|
4411 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
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diff
changeset
|
4412 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
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changeset
|
4413 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
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diff
changeset
|
4414 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
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diff
changeset
|
4415 |
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diff
changeset
|
4416 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
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diff
changeset
|
4417 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
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diff
changeset
|
4418 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
f0d4c4707e64
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132
diff
changeset
|
4419 |
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132
diff
changeset
|
4420 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
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diff
changeset
|
4421 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
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diff
changeset
|
4422 self.assertEqual(str(content1), str(content2)) |
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4423 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4424 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
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138
diff
changeset
|
4425 def test_bitbucket_issue_94(self): |
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4426 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
319 | 4427 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
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138
diff
changeset
|
4428 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4429 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4430 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4431 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4432 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4433 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4434 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4435 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
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138
diff
changeset
|
4436 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
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138
diff
changeset
|
4437 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
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138
diff
changeset
|
4438 self.assertEqual(1, len(a)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4439 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4440 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4441 self.assertEqual(1, len(b)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4442 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4443 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4444 self.assertEqual(1, len(c)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4445 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4446 self.assertEqual(a, b) # Modified DICOM |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4447 self.assertNotEqual(a, c) # Anonymized DICOM |
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4448 |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4449 |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4450 def test_metadata_origin(self): |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4451 # Upload using the REST API |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4452 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
143
28d50ffac07d
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parents:
142
diff
changeset
|
4453 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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142
diff
changeset
|
4454 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
28d50ffac07d
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parents:
142
diff
changeset
|
4455 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
28d50ffac07d
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parents:
142
diff
changeset
|
4456 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
315 | 4457 |
4458 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
4459 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
4460 | |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4461 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
7809fdf8056f
testing metadata?expand
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143
diff
changeset
|
4462 self.assertEqual('RestApi', m['Origin']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4463 self.assertEqual('', m['RemoteAET']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4464 self.assertNotEqual('', m['RemoteIP']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4465 self.assertFalse('CalledAET' in m) |
315 | 4466 self.assertTrue('HttpUsername' in m) |
4467 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4468 |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4469 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4470 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4471 self.assertEqual('1', m['IndexInSeries']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4472 self.assertTrue('ReceptionDate' in m) |
7809fdf8056f
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Sebastien Jodogne <s.jodogne@gmail.com>
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143
diff
changeset
|
4473 |
143
28d50ffac07d
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142
diff
changeset
|
4474 DoDelete(_REMOTE, '/instances/%s' % i) |
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142
diff
changeset
|
4475 |
28d50ffac07d
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Sebastien Jodogne <s.jodogne@gmail.com>
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142
diff
changeset
|
4476 # Upload using the DICOM protocol |
28d50ffac07d
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Sebastien Jodogne <s.jodogne@gmail.com>
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142
diff
changeset
|
4477 subprocess.check_call([ FindExecutable('storescu'), |
28d50ffac07d
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4478 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
144
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4479 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4480 '-xw' ]) # Propose JPEG2000 |
143
28d50ffac07d
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Sebastien Jodogne <s.jodogne@gmail.com>
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142
diff
changeset
|
4481 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
28d50ffac07d
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142
diff
changeset
|
4482 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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test_metadata_origin
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142
diff
changeset
|
4483 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4484 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
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4485 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
144
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4486 |
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4487 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4488 self.assertEqual('DicomProtocol', m['Origin']) |
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4489 self.assertEqual('STORESCU', m['RemoteAET']) |
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4490 self.assertNotEqual('', m['RemoteIP']) |
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4491 self.assertEqual('ANY-SCP', m['CalledAET']) |
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4492 self.assertFalse('HttpUsername' in m) |
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4493 |
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4494 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4495 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4496 self.assertEqual('1', m['IndexInSeries']) |
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4497 self.assertTrue('ReceptionDate' in m) |
147 | 4498 |
4499 | |
4500 def test_lua_deadlock(self): | |
4501 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
4502 # is with the lua script I'm using for conversion of images to | |
4503 # JPEG2000. When the script is used with 1.4.0 the first | |
4504 # instance appears to be stored and then everything just | |
4505 # halts, ie Orthanc wont respond to anything after that." | |
4506 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
174 | 4507 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
147 | 4508 |
4509 subprocess.check_call([ FindExecutable('storescu'), | |
4510 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
4511 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
4512 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
4513 ]) | |
4514 | |
4515 instances = DoGet(_REMOTE, '/instances') | |
4516 self.assertEqual(2, len(instances)) | |
4517 | |
4518 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
4519 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
175 | 4520 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
147 | 4521 self.assertEqual(t1, t2); |
154
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4522 |
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4523 |
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4524 def test_find_group_length(self): |
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4525 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
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4526 # one of the Generic Group Length tags (*, 0x0000) |
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4527 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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4528 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
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4529 self.assertFalse('UnableToProcess' in result) |
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4530 self.assertFalse('E:' in result) |
179
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4531 |
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4532 |
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4533 def test_split(self): |
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4534 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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4535 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
254
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4536 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4537 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
179
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4538 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4539 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4540 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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4541 |
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4542 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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4543 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4544 |
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4545 info = DoGet(_REMOTE, '/studies/%s' % study) |
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4546 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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4547 |
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4548 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4549 (_REMOTE, '/studies/%s/split' % study, { |
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4550 'Series' : [ t2 ], |
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4551 'Replace' : { 'PatientName' : 'Hello' }, |
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4552 'Remove' : [ 'ReferringPhysicianName' ], |
181 | 4553 'KeepSource' : False, |
4554 'Asynchronous' : True | |
179
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4555 })) |
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4556 |
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4557 self.assertNotEqual(None, job) |
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4558 |
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4559 studies = set(DoGet(_REMOTE, '/studies')) |
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4560 self.assertEqual(2, len(studies)) |
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4561 |
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4562 series = set(DoGet(_REMOTE, '/series')) |
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4563 self.assertEqual(2, len(series)) |
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4564 self.assertTrue(t1 in series) |
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4565 |
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4566 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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4567 self.assertTrue(study in studies) |
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4568 self.assertTrue(study2 in studies) |
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4569 |
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4570 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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4571 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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4572 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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4573 |
254
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4574 sopInstanceUids = set() |
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4575 for i in DoGet(_REMOTE, '/instances?expand'): |
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4576 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4577 |
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4578 self.assertTrue(knee1Sop in sopInstanceUids) |
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4579 |
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4580 # Fails if Orthanc <= 1.5.7 |
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4581 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4582 |
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4583 # One original instance is kept, another one is added because of the split |
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4584 self.assertEqual(2, len(sopInstanceUids)) |
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4585 |
179
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|
4586 |
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4587 def test_merge(self): |
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4588 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
254
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4589 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
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4590 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4591 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
179
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4592 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4593 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4594 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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4595 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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4596 |
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4597 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4598 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4599 |
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4600 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4601 (_REMOTE, '/studies/%s/merge' % knee, { |
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4602 'Resources' : [ brainix ], |
181 | 4603 'KeepSource' : True, |
4604 'Synchronous' : False | |
179
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4605 })) |
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4606 |
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4607 self.assertNotEqual(None, job) |
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4608 |
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4609 studies = set(DoGet(_REMOTE, '/studies')) |
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4610 self.assertEqual(2, len(studies)) |
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4611 self.assertTrue(knee in studies) |
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4612 self.assertTrue(brainix in studies) |
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4613 |
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4614 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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4615 self.assertTrue(t1 in series) |
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4616 series.remove(t1) |
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4617 self.assertEqual(1, len(series)) |
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4618 |
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4619 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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4620 self.assertEqual(1, len(instances)) |
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4621 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4622 |
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4623 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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4624 self.assertEqual(1, len(instances)) |
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4625 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4626 |
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4627 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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4628 self.assertEqual(1, len(instances)) |
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4629 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4630 |
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4631 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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4632 |
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4633 for key in tags['PatientMainDicomTags']: |
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4634 self.assertEqual(a[key], merged[key]) |
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4635 if (key in b and key != 'PatientSex'): |
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4636 self.assertNotEqual(a[key], b[key]) |
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4637 |
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4638 for key in tags['MainDicomTags']: |
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4639 # Not in the patient/study module |
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4640 if (not key in [ 'InstitutionName', |
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4641 'RequestingPhysician', |
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4642 'RequestedProcedureDescription', ]): |
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4643 self.assertEqual(a[key], merged[key]) |
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4644 if (key in b): |
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4645 self.assertNotEqual(a[key], b[key]) |
254
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4646 |
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4647 sopInstanceUids = set() |
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4648 for i in DoGet(_REMOTE, '/instances?expand'): |
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4649 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4650 |
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4651 self.assertTrue(kneeSop in sopInstanceUids) |
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4652 self.assertTrue(brainixSop in sopInstanceUids) |
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4653 |
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4654 # Fails if Orthanc <= 1.5.7 |
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4655 # The 2 original instances are kept, another one is added because of the merge |
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4656 self.assertEqual(3, len(sopInstanceUids)) |
179
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4657 |
187 | 4658 |
4659 def test_async_archive(self): | |
4660 # Testing the asynchronous generation of archives/medias (new | |
4661 # in Orthanc 1.4.3) | |
4662 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
4663 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
4664 | |
4665 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
4666 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
4667 | |
4668 job = MonitorJob2(_REMOTE, lambda: DoPost | |
508 | 4669 (_REMOTE, '/series/%s/archive' % kneeT1, { |
187 | 4670 'Synchronous' : False |
4671 })) | |
4672 | |
4673 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4674 self.assertEqual(1, len(z.namelist())) | |
4675 self.assertFalse('DICOMDIR' in z.namelist()) | |
4676 | |
354
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|
4677 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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4678 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4679 self.assertEqual(1, info['Content']['InstancesCount']) |
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4680 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4681 |
187 | 4682 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
508 | 4683 (_REMOTE, '/series/%s/media' % kneeT1, { |
187 | 4684 'Synchronous' : False |
4685 })) | |
4686 | |
4687 # The archive from the first job has been replaced by the | |
4688 # archive from second job (as MediaArchiveSize == 1) | |
4689 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
4690 | |
4691 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
4692 self.assertEqual(2, len(z.namelist())) | |
4693 self.assertTrue('DICOMDIR' in z.namelist()) | |
4694 | |
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|
4695 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4696 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4697 self.assertEqual(1, info['Content']['InstancesCount']) |
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4698 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4699 |
187 | 4700 job = MonitorJob2(_REMOTE, lambda: DoPost |
4701 (_REMOTE, '/tools/create-archive', { | |
4702 'Synchronous' : False, | |
4703 'Resources' : [ kneeT1, kneeT2 ], | |
4704 })) | |
4705 | |
4706 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4707 self.assertEqual(2, len(z.namelist())) | |
4708 self.assertFalse('DICOMDIR' in z.namelist()) | |
4709 | |
354
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|
4710 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4711 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4712 self.assertEqual(2, info['Content']['InstancesCount']) |
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4713 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4714 |
187 | 4715 job = MonitorJob2(_REMOTE, lambda: DoPost |
4716 (_REMOTE, '/tools/create-media', { | |
4717 'Synchronous' : False, | |
4718 'Resources' : [ kneeT1, kneeT2 ], | |
4719 })) | |
4720 | |
4721 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4722 self.assertEqual(3, len(z.namelist())) | |
4723 self.assertTrue('DICOMDIR' in z.namelist()) | |
188
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4724 |
354
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4725 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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4726 self.assertEqual(2, info['Content']['InstancesCount']) |
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4727 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4728 |
187 | 4729 |
540
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|
4730 def test_archive_job_delete_output(self): |
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4731 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
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4732 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
4733 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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|
4734 |
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4735 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4736 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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|
4737 |
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4738 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4739 (_REMOTE, '/series/%s/archive' % kneeT1, { |
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4740 'Synchronous' : False |
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|
4741 })) |
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|
4742 |
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|
4743 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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4744 # delete the output |
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4745 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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4746 # make sure it is not available anymore afterwards |
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4747 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
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4748 |
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4749 # repeat with another resource/job |
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4750 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4751 (_REMOTE, '/series/%s/archive' % kneeT2, { |
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4752 'Synchronous' : False |
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4753 })) |
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4754 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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4755 # delete the output |
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4756 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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4757 # make sure it is not available anymore afterwards |
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4758 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
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4759 |
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|
4760 |
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4761 |
188
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4762 def test_queries_hierarchy(self): |
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4763 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
189
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4764 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
188
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diff
changeset
|
4765 |
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diff
changeset
|
4766 tags = { |
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diff
changeset
|
4767 'NumberOfPatientRelatedInstances' : '', |
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diff
changeset
|
4768 'NumberOfPatientRelatedSeries' : '', |
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diff
changeset
|
4769 'NumberOfPatientRelatedStudies' : '', |
7d585263808b
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diff
changeset
|
4770 'NumberOfStudyRelatedInstances' : '', |
7d585263808b
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diff
changeset
|
4771 'NumberOfStudyRelatedSeries' : '', |
7d585263808b
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diff
changeset
|
4772 'NumberOfSeriesRelatedInstances' : '', |
7d585263808b
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diff
changeset
|
4773 } |
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diff
changeset
|
4774 |
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4775 tags2 = copy.copy(tags) |
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4776 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4777 |
188
7d585263808b
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diff
changeset
|
4778 patient = DoPost(_REMOTE, '/modalities/self/query', { |
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diff
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|
4779 'Level' : 'Patient', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4780 'Query' : tags2 |
188
7d585263808b
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diff
changeset
|
4781 }) ['ID'] |
7d585263808b
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diff
changeset
|
4782 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4783 study = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
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diff
changeset
|
4784 'Level' : 'Study', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4785 'Query' : tags2 |
188
7d585263808b
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diff
changeset
|
4786 }) ['ID'] |
7d585263808b
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diff
changeset
|
4787 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4788 series = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
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diff
changeset
|
4789 'Level' : 'Series', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4790 'Query' : tags2 |
188
7d585263808b
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diff
changeset
|
4791 }) ['ID'] |
7d585263808b
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diff
changeset
|
4792 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4793 instance = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4794 'Level' : 'Instance', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4795 'Query' : tags2 |
188
7d585263808b
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diff
changeset
|
4796 }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4797 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4798 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4799 self.assertEqual(1, len(p)) |
7d585263808b
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changeset
|
4800 self.assertEqual('887', p[0]['PatientID']) |
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diff
changeset
|
4801 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
7d585263808b
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diff
changeset
|
4802 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
7d585263808b
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diff
changeset
|
4803 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
7d585263808b
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diff
changeset
|
4804 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
7d585263808b
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diff
changeset
|
4805 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
7d585263808b
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diff
changeset
|
4806 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
7d585263808b
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diff
changeset
|
4807 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4808 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
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diff
changeset
|
4809 self.assertEqual(1, len(p)) |
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diff
changeset
|
4810 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4811 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
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diff
changeset
|
4812 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4813 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4814 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4815 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4816 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4817 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4818 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
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diff
changeset
|
4819 self.assertEqual(1, len(p)) |
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diff
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|
4820 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4821 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
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diff
changeset
|
4822 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
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diff
changeset
|
4823 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4824 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4825 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4826 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4827 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4828 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4829 self.assertEqual(1, len(p)) |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4830 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4831 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4832 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
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new test: test_queries_hierarchy
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diff
changeset
|
4833 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4834 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4835 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4836 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4837 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
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diff
changeset
|
4838 { 'Query' : tags }) ['ID'] |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4839 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4840 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4841 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4842 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
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diff
changeset
|
4843 { 'Query' : tags }) ['ID'] |
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diff
changeset
|
4844 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4845 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
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diff
changeset
|
4846 |
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4847 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4848 { 'Query' : tags }) ['ID'] |
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diff
changeset
|
4849 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
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diff
changeset
|
4850 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
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diff
changeset
|
4851 |
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diff
changeset
|
4852 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
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diff
changeset
|
4853 { 'Query' : tags }) ['ID'] |
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diff
changeset
|
4854 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
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diff
changeset
|
4855 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
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diff
changeset
|
4856 |
7d585263808b
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diff
changeset
|
4857 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
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diff
changeset
|
4858 { 'Query' : tags }) ['ID'] |
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diff
changeset
|
4859 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
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diff
changeset
|
4860 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
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diff
changeset
|
4861 |
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diff
changeset
|
4862 |
189
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test_dicom_disk_size
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changeset
|
4863 def test_dicom_disk_size(self): |
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|
4864 dicomSize = 0 |
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test_dicom_disk_size
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diff
changeset
|
4865 |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4866 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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fix tests if StorageCompression is true
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diff
changeset
|
4867 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
189
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test_dicom_disk_size
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diff
changeset
|
4868 |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4869 for i in range(2): |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4870 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4871 UploadInstance(_REMOTE, p) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4872 dicomSize += os.path.getsize(GetDatabasePath(p)) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4873 |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4874 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4875 self.assertEqual(2, s['CountInstances']) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4876 self.assertEqual(2, s['CountSeries']) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4877 self.assertEqual(1, s['CountStudies']) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4878 |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4879 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4880 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4881 if isCompressed: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4882 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4883 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4884 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4885 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4886 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4887 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4888 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4889 if IsDicomUntilPixelDataStored(_REMOTE): |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4890 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4891 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4892 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4893 else: |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4894 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4895 # attachment in addition to the DICOM file |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4896 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4897 |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4898 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4899 def test_changes_2(self): |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4900 # More consistent behavior since Orthanc 1.5.2 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4901 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4902 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4903 # Make sure that this is not the first change |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4904 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4905 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4906 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4907 DoDelete(_REMOTE, '/instances/%s' % a) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4908 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4909 # No more instance, but there were previous changes |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4910 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4911 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4912 c = DoGet(_REMOTE, '/changes') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4913 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4914 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4915 seq = c['Last'] |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4916 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4917 c = DoGet(_REMOTE, '/changes?last') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4918 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4919 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4920 self.assertEqual(seq, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4921 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4922 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4923 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4924 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4925 self.assertEqual(seq, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4926 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4927 # Add one instance |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4928 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4929 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4930 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4931 c = DoGet(_REMOTE, '/changes') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4932 self.assertEqual(4, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4933 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4934 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4935 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4936 c = DoGet(_REMOTE, '/changes?last') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4937 self.assertEqual(1, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4938 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4939 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4940 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4941 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4942 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4943 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4944 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4945 |
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4946 # Add, then delete, one user-defined metadata: This triggers 2 |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4947 # changes of type "UpdatedMetadata" |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4948 i = DoGet(_REMOTE, '/instances') [0] |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4949 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4950 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4951 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4952 self.assertEqual('200', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4953 self.assertEqual('hello', body) |
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4954 |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4955 c = DoGet(_REMOTE, '/changes?last') |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4956 self.assertEqual(1, len(c['Changes'])) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4957 self.assertTrue(c['Done']) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4958 self.assertEqual(seq + 5, c['Last']) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4959 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4960 |
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4961 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4962 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4963 'If-Match' : headers['etag'] |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4964 }) |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4965 else: |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4966 self.assertFalse('etag' in headers) |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4967 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4968 |
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4969 c = DoGet(_REMOTE, '/changes?last') |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4970 self.assertEqual(1, len(c['Changes'])) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4971 self.assertTrue(c['Done']) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4972 self.assertEqual(seq + 6, c['Last']) |
27e0a2fcdc85
test /changes of type UpdatedMetadata
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diff
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|
4973 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
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4974 |
202
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|
4975 # Remove the uploaded instance |
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4976 DoDelete(_REMOTE, '/instances/%s' % a) |
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4977 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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4978 |
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|
4979 c = DoGet(_REMOTE, '/changes') |
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4980 self.assertEqual(0, len(c['Changes'])) |
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|
4981 self.assertTrue(c['Done']) |
389
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|
4982 self.assertEqual(seq + 6, c['Last']) |
202
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4983 |
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|
4984 c = DoGet(_REMOTE, '/changes?last') |
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4985 self.assertEqual(0, len(c['Changes'])) |
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|
4986 self.assertTrue(c['Done']) |
389
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|
4987 self.assertEqual(seq + 6, c['Last']) |
202
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|
4988 |
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test_changes_2 and test_bitbucket_issue_124
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diff
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|
4989 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
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|
4990 self.assertEqual(0, len(c['Changes'])) |
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|
4991 self.assertTrue(c['Done']) |
389
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|
4992 self.assertEqual(seq + 6, c['Last']) |
202
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|
4993 |
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test_changes_2 and test_bitbucket_issue_124
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|
4994 |
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diff
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|
4995 def test_bitbucket_issue_124(self): |
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4996 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
508 | 4997 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
4998 | |
4999 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
202
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5000 self.assertEqual(2, len(z.namelist())) |
207
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202
diff
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|
5001 |
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test_invalid_findscp
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diff
changeset
|
5002 |
a515eec74078
test_invalid_findscp
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parents:
202
diff
changeset
|
5003 def test_invalid_findscp(self): |
a515eec74078
test_invalid_findscp
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parents:
202
diff
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5004 UploadInstance(_REMOTE, 'DummyCT.dcm') |
a515eec74078
test_invalid_findscp
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diff
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|
5005 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
a515eec74078
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5006 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
208
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diff
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|
5007 |
2444c9a7c422
test_bitbucket_issue_90
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diff
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|
5008 |
2444c9a7c422
test_bitbucket_issue_90
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parents:
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diff
changeset
|
5009 def test_bitbucket_issue_90(self): |
2444c9a7c422
test_bitbucket_issue_90
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diff
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|
5010 def CountDicomResults(sex): |
2444c9a7c422
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|
5011 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
2444c9a7c422
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diff
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|
5012 return len(re.findall('\(0010,0040\)', a)) |
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test_bitbucket_issue_90
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diff
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|
5013 |
2444c9a7c422
test_bitbucket_issue_90
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diff
changeset
|
5014 def CountRestResults(sex): |
2444c9a7c422
test_bitbucket_issue_90
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diff
changeset
|
5015 a = DoPost(_REMOTE, '/tools/find', |
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diff
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|
5016 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
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diff
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|
5017 return len(a) |
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test_bitbucket_issue_90
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diff
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|
5018 |
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test_bitbucket_issue_90
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diff
changeset
|
5019 # Just like the "CR000000.dcm" of the issue, the test image |
2444c9a7c422
test_bitbucket_issue_90
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diff
changeset
|
5020 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
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|
5021 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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diff
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|
5022 |
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diff
changeset
|
5023 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
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|
5024 |
2444c9a7c422
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diff
changeset
|
5025 # In wildcard constraints, the patient sex must be set for a match to occur |
2444c9a7c422
test_bitbucket_issue_90
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diff
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5026 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
2444c9a7c422
test_bitbucket_issue_90
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|
5027 self.assertEqual(0, CountRestResults('*')) |
2444c9a7c422
test_bitbucket_issue_90
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diff
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|
5028 |
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test_bitbucket_issue_90
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diff
changeset
|
5029 # In single-valued constraints, the patient sex must be set |
2444c9a7c422
test_bitbucket_issue_90
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diff
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|
5030 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
2444c9a7c422
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diff
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|
5031 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
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diff
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|
5032 self.assertEqual(0, CountRestResults('F')) |
2444c9a7c422
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diff
changeset
|
5033 self.assertEqual(0, CountRestResults('M')) |
2444c9a7c422
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diff
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|
5034 |
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diff
changeset
|
5035 # Empty constraints are only used to ask the actual value of |
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diff
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|
5036 # the tag to be added to the *answer*. The tag should not used |
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diff
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|
5037 # as a filter in such a situation. |
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parents:
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diff
changeset
|
5038 self.assertEqual(1, CountDicomResults('PatientSex')) |
2444c9a7c422
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207
diff
changeset
|
5039 self.assertEqual(1, CountDicomResults('PatientSex=')) |
2444c9a7c422
test_bitbucket_issue_90
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diff
changeset
|
5040 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
210
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diff
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|
5041 |
2c50c8f340c2
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diff
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|
5042 |
2c50c8f340c2
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diff
changeset
|
5043 def test_rest_modalities_in_study(self): |
2c50c8f340c2
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diff
changeset
|
5044 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
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diff
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|
5045 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
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diff
changeset
|
5046 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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test_rest_modalities_in_study
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diff
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|
5047 |
2c50c8f340c2
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diff
changeset
|
5048 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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diff
changeset
|
5049 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
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diff
changeset
|
5050 self.assertEqual(0, len(a)) |
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diff
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|
5051 |
2c50c8f340c2
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208
diff
changeset
|
5052 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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diff
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|
5053 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
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diff
changeset
|
5054 self.assertEqual(1, len(a)) |
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diff
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|
5055 |
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diff
changeset
|
5056 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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diff
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|
5057 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
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diff
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|
5058 self.assertEqual(1, len(a)) |
211 | 5059 |
5060 | |
5061 def test_series_status(self): | |
5062 def HasCompletedInChanges(): | |
5063 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
5064 if c['ChangeType'] == 'CompletedSeries': | |
5065 return True; | |
5066 | |
5067 return False | |
5068 | |
5069 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
5070 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
5071 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
5072 self.assertFalse(HasCompletedInChanges()) | |
5073 | |
5074 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
5075 | |
5076 for i in range(3): | |
5077 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
5078 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
5079 self.assertFalse(HasCompletedInChanges()) | |
5080 | |
5081 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
5082 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
5083 self.assertTrue(HasCompletedInChanges()) | |
5084 | |
5085 DoDelete(_REMOTE, '/changes') | |
5086 self.assertFalse(HasCompletedInChanges()) | |
5087 | |
5088 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
5089 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
5090 self.assertFalse(HasCompletedInChanges()) | |
5091 | |
215 | 5092 |
5093 def test_dicomweb(self): | |
5094 def Compare(dicom, reference): | |
5095 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
5096 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
5097 headers = { 'Accept' : 'application/dicom+json' }) | |
5098 with open(GetDatabasePath(reference), 'rb') as c: | |
5099 d = json.load(c) | |
220 | 5100 AssertAlmostEqualRecursive(self, d, b) |
215 | 5101 |
5102 Compare('DummyCT.dcm', 'DummyCT.json') | |
5103 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
5104 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
5105 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
217 | 5106 |
5107 | |
5108 def test_issue_95_encodings(self): | |
319 | 5109 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
217 | 5110 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
5111 | |
5112 # Very useful tool: "file2" from package "file-kanji" | |
5113 | |
5114 def GetPatientName(dicom): | |
5115 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
5116 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
5117 return j['PatientName'] | |
5118 | |
5119 def ComparePatientName(name, dicom): | |
5120 self.assertEqual(name, GetPatientName(dicom)) | |
5121 | |
5122 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
5123 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
5124 | |
5125 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
5126 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
5127 | |
5128 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
5129 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
5130 | |
5131 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
5132 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
5133 | |
5134 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
5135 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
5136 | |
5137 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
5138 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
5139 | |
5140 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
5141 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
5142 | |
5143 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
5144 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
5145 | |
5146 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
5147 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
5148 # Linux console into Emacs automatically reverse the string | |
5149 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
5150 | |
5151 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
5152 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
5153 # characters by default, but copy/paste works with Emacs | |
5154 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
5155 | |
5156 # SCSH32: This SpecificCharacterSet is composed of 2 | |
5157 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
5158 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
5159 # remainer. Orthanc only takes into consideration the first | |
5160 # codepage: This is a limitation. | |
5161 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
5162 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ヤマダ^タロウ=')) | |
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5163 |
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5164 |
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5165 def test_findscu_missing_tags(self): |
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5166 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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5167 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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5168 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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5169 |
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5170 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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5171 |
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5172 # We have 2 instances... |
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5173 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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5174 self.assertEqual(2, len(patientNames)) |
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5175 self.assertEqual('KNIX', patientNames[0]) |
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5176 self.assertEqual('KNIX', patientNames[1]) |
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5177 |
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5178 # ...but only 1 value for the "Rows" tag |
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5179 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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5180 self.assertEqual(1, len(rows)) |
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5181 self.assertEqual('512', rows[0]) |
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5182 |
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5183 |
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5184 |
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5185 def test_bitbucket_issue_131(self): |
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5186 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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5187 # StudyInstanceUID in it's database." |
319 | 5188 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
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5189 |
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5190 # Insert 2 instances, with the same StudyInstanceUID, but with |
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5191 # different patient IDs. Orthanc will create 2 distincts |
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5192 # patients, and the hierarchy of resources above the two |
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5193 # instances will be fully disjoint. |
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5194 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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5195 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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5196 |
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5197 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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5198 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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5199 |
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5200 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5201 'Level' : 'Study', |
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5202 'Query' : {"PatientID": "A" }})['ID'] |
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5203 |
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5204 # 1 study is matched |
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5205 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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|
5206 |
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5207 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 5208 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
5209 (_REMOTE, '/queries/%s/retrieve' % a, | |
5210 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
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|
5211 |
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5212 # The two studies are matched, as we made the request at the |
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5213 # Study level, thus the shared StudyInstanceUID is used as the key |
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5214 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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|
5215 |
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|
5216 |
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|
5217 # Match the 2 studies |
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5218 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5219 'Level' : 'Study', |
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|
5220 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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5221 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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|
5222 DropOrthanc(_LOCAL) |
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|
5223 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 5224 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
5225 (_REMOTE, '/queries/%s/retrieve' % a, | |
5226 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
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|
5227 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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|
5228 |
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diff
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|
5229 |
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|
5230 # Same test, at the patient level => only 1 instance is transfered |
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|
5231 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5232 'Level' : 'Patient', |
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|
5233 'Query' : {"PatientID": "A" }})['ID'] |
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5234 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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|
5235 DropOrthanc(_LOCAL) |
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|
5236 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 5237 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
5238 (_REMOTE, '/queries/%s/retrieve' % a, | |
5239 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
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|
5240 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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|
5241 |
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|
5242 |
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|
5243 # Same test, at the series level => only 1 instance is transfered |
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5244 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5245 'Level' : 'Series', |
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5246 'Query' : {"PatientID": "A" }})['ID'] |
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5247 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5248 DropOrthanc(_LOCAL) |
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|
5249 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 5250 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
5251 (_REMOTE, '/queries/%s/retrieve' % a, | |
5252 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
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5253 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5254 |
233
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5255 |
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|
5256 def test_bitbucket_issue_136(self): |
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5257 UploadInstance(_REMOTE, 'Issue137.dcm') |
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|
5258 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
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|
5259 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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5260 self.assertEqual(1, len(patientNames)) |
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5261 self.assertEqual('John Doe', patientNames[0]) |
234
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5262 |
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5263 |
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5264 def test_anonymize_relationships_4(self): |
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5265 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
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5266 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
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5267 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
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5268 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
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5269 |
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5270 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
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5271 'application/json')['ID'] |
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5272 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
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5273 self.assertEqual(2, len(series)) |
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5274 |
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5275 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
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5276 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
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5277 self.assertEqual(1, len(cr)) |
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5278 self.assertEqual(1, len(pr)) |
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5279 self.assertEqual(1, len(cr[0]['Instances'])) |
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5280 self.assertEqual(1, len(pr[0]['Instances'])) |
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5281 |
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5282 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
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5283 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
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5284 |
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5285 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
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5286 crinstance['MainDicomTags']['SOPInstanceUID']) |
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5287 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
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5288 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
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5289 |
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5290 # This fails on Orthanc <= 1.5.6 |
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5291 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
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5292 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
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5293 |
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5294 |
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5295 def test_anonymize_relationships_5(self): |
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5296 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
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5297 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
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5298 oStudyId = ct1['ParentStudy'] |
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5299 oCtInstanceId = ct1['ID'] |
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5300 oRtInstanceId = rt1['ID'] |
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5301 |
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5302 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
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5303 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
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5304 |
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5305 # first validate the relationships in the source data |
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5306 oStudyUID = oCtTags['StudyInstanceUID'] |
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5307 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
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5308 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
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5309 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5310 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
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5311 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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5312 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
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5313 |
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5314 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5315 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
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5316 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
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5317 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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5318 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5319 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5320 |
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5321 ### anonymize |
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5322 |
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5323 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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5324 'application/json')['ID'] |
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5325 |
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5326 ### validate |
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5327 |
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5328 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
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5329 self.assertEqual(2, len(aSeries)) |
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5330 |
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5331 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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diff
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5332 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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diff
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5333 aCtInstanceId = aCt[0]['Instances'][0] |
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diff
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5334 aRtInstanceId = aRt[0]['Instances'][0] |
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diff
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5335 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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diff
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5336 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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diff
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5337 |
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5338 # now validate the relationships in the anonymized data |
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diff
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|
5339 aStudyUID = aCtTags['StudyInstanceUID'] |
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|
5340 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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diff
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5341 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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diff
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|
5342 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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diff
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5343 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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diff
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|
5344 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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diff
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|
5345 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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diff
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5346 |
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diff
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|
5347 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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diff
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|
5348 # make sure all UIDs have been updated |
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diff
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|
5349 self.assertNotEqual(oStudyUID, aStudyUID) |
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5350 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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diff
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5351 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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diff
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5352 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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diff
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5353 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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diff
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5354 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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diff
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|
5355 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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5356 |
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diff
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|
5357 # validate the relationships |
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5358 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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diff
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|
5359 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
256 | 5360 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
5361 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
255
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diff
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|
5362 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5363 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5364 |
256 | 5365 def test_anonymize_relationships_5b(self): |
5366 # same test as previous one but, this time, we force the StudyInstanceUID | |
5367 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
5368 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
5369 oStudyId = ct1['ParentStudy'] | |
5370 oCtInstanceId = ct1['ID'] | |
5371 oRtInstanceId = rt1['ID'] | |
5372 | |
5373 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
5374 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
5375 | |
5376 ### anonymize while forcing the StudyInstanceUID | |
5377 | |
5378 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
5379 'application/json')['ID'] | |
5380 | |
5381 ### validate | |
5382 | |
5383 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
5384 self.assertEqual(2, len(aSeries)) | |
5385 | |
5386 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
5387 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
5388 aCtInstanceId = aCt[0]['Instances'][0] | |
5389 aRtInstanceId = aRt[0]['Instances'][0] | |
5390 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
5391 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
5392 | |
5393 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
5394 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
5395 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
255
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5396 |
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5397 |
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|
5398 def test_bitbucket_issue_140(self): |
266 | 5399 # "Modifying private tags with REST API changes VR from LO to |
267 | 5400 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
319 | 5401 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
235
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|
5402 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
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5403 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
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5404 |
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|
5405 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
266 | 5406 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
5407 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
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5408 }, 'application/json') ['ID'] |
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test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
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234
diff
changeset
|
5409 |
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5410 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
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test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5411 self.assertEqual(1, len(instances)) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5412 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5413 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5414 t = tags['4321,1012'] |
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5415 self.assertEqual('String', t['Type']) |
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5416 self.assertEqual('RadioButton3', t['Name']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5417 self.assertEqual('RadioLogic', t['PrivateCreator']) |
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test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5418 self.assertEqual('jklmopq', t['Value']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5419 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5420 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5421 t = tags['4321,1012'] |
327 | 5422 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
235
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test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5423 self.assertEqual('RadioButton3', t['Name']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5424 self.assertEqual('RadioLogic', t['PrivateCreator']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5425 self.assertEqual('aaabbbccc', t['Value']) |
236
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5426 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5427 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5428 def test_find_normalize(self): |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5429 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5430 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5431 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5432 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5433 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5434 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5435 'Query' : { 'Rows' : '42' } |
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5436 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5437 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5438 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5439 self.assertEqual(1, len(b)) |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5440 self.assertFalse('Rows' in b[0]) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5441 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5442 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5443 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5444 'Query' : { 'Rows' : '42' }, |
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5445 'Normalize' : False |
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5446 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5447 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5448 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5449 self.assertEqual(0, len(b)) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5450 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5451 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5452 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5453 'Query' : { 'Rows' : '512' }, |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5454 'Normalize' : False |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5455 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5456 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5457 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5458 self.assertEqual(1, len(b)) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5459 self.assertTrue('Rows' in b[0]) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5460 self.assertEqual('512', b[0]['Rows']) |
237 | 5461 |
5462 a = DoPost(_REMOTE, '/modalities/self/query', { | |
5463 'Level' : 'Instance', | |
5464 'Query' : { 'Rows' : '' }, | |
5465 'Normalize' : False | |
5466 }) ['ID'] | |
5467 | |
5468 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
5469 self.assertEqual(1, len(b)) | |
5470 self.assertTrue('Rows' in b[0]) | |
5471 self.assertEqual('512', b[0]['Rows']) | |
5472 | |
5473 self.assertRaises(Exception, lambda: DoPost( | |
5474 _REMOTE, '/modalities/self/query', { | |
5475 'Level' : 'Instance', | |
5476 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
5477 'Normalize' : False | |
5478 })) | |
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5479 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5480 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5481 def test_bitbucket_issue_141(self): |
319 | 5482 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5483 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5484 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5485 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5486 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5487 pdf = f.read() |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5488 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5489 b = DoPost(_REMOTE, '/tools/create-dicom', { |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5490 'Parent' : study, |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5491 'Tags' : {}, |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5492 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5493 }) ['ID'] |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5494 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5495 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5496 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5497 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5498 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5499 |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5500 |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5501 def test_modifying_missing_patientid(self): |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5502 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5503 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5504 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
262 | 5505 |
5506 | |
5507 def test_log_level(self): | |
319 | 5508 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
262 | 5509 original = DoGet(_REMOTE, '/tools/log-level') |
5510 | |
5511 DoPut(_REMOTE, '/tools/log-level', 'default') | |
5512 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
5513 DoGet(_REMOTE, '/system') | |
5514 | |
5515 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
5516 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
5517 DoGet(_REMOTE, '/system') | |
5518 | |
5519 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
5520 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
5521 DoGet(_REMOTE, '/system') | |
5522 | |
5523 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
5524 | |
5525 # Switch back to the original log level | |
5526 DoPut(_REMOTE, '/tools/log-level', original) | |
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
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263
diff
changeset
|
5527 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5528 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5529 def test_upload_compressed(self): |
265 | 5530 # New in Orthanc 1.6.0 |
264
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5531 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
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263
diff
changeset
|
5532 d = f.read() |
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test_upload_compressed
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263
diff
changeset
|
5533 |
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5534 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
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test_upload_compressed
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diff
changeset
|
5535 |
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5536 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
445f498bc1d4
test_upload_compressed
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diff
changeset
|
5537 headers = { 'Content-Encoding' : 'nope' })) |
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5538 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
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263
diff
changeset
|
5539 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5540 headers = { 'Content-Encoding' : 'gzip' }) |
445f498bc1d4
test_upload_compressed
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263
diff
changeset
|
5541 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
262 | 5542 |
5543 | |
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5544 def test_study_series_find_inconsistency(self): |
a2719263fd04
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diff
changeset
|
5545 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5546 |
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5547 def CountAnswers(query): |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5548 a = DoPost(_REMOTE, 'modalities/self/query', query) |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5549 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5550 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5551 # This instance has "SeriesDescription" (0008,103e) tag, but no |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5552 # "ProtocolName" (0018,1030). Both of those tags are part of |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5553 # the "main DICOM tags" of Orthanc. |
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|
5554 UploadInstance(_REMOTE, 'Issue137.dcm') |
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diff
changeset
|
5555 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5556 |
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262
diff
changeset
|
5557 self.assertEqual(1, CountAnswers({ |
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262
diff
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|
5558 'Level' : 'Study', |
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diff
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|
5559 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5560 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5561 self.assertEqual(1, CountAnswers({ |
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5562 'Level' : 'Series', |
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5563 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5564 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5565 |
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test_study_series_find_inconsistency
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262
diff
changeset
|
5566 ## |
a2719263fd04
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262
diff
changeset
|
5567 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
a2719263fd04
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diff
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|
5568 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
a2719263fd04
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diff
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|
5569 ## |
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diff
changeset
|
5570 |
a2719263fd04
test_study_series_find_inconsistency
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parents:
262
diff
changeset
|
5571 # At the study level, the "SeriesDescription" tag is not allowed, but |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
5572 # is wiped out by the normalization |
a2719263fd04
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diff
changeset
|
5573 self.assertEqual(0, CountAnswers({ |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5574 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5575 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5576 'SeriesDescription' : 'NOPE' |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5577 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5578 'Normalize' : False |
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test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5579 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5580 self.assertEqual(0, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5581 # This test fails on Orthanc <= 1.5.8 |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5582 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5583 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5584 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5585 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5586 'Normalize' : False |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5587 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5588 self.assertEqual(1, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5589 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5590 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5591 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5592 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5593 'Normalize' : True |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5594 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5595 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5596 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5597 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5598 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5599 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5600 'Normalize' : True |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5601 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5602 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5603 for normalize in [ True, False ]: |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5604 # At the series level, the "SeriesDescription" tag is allowed, and |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5605 # normalization has no effect |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5606 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5607 # "Universal matching" will match all entities, including |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5608 # those with the missing tag |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5609 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5610 self.assertEqual(1, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5611 'Level' : 'Series', |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5612 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5613 'SeriesDescription' : '' # Universal matching |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5614 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5615 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5616 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5617 # "Universal matching" will match all entities, including |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5618 # those with the missing tag |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5619 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5620 self.assertEqual(1, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5621 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5622 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5623 'SeriesDescription' : '*' # Wildcard matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5624 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5625 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5626 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5627 self.assertEqual(1, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5628 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5629 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5630 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5631 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5632 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5633 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5634 self.assertEqual(0, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5635 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5636 'Query' : { |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5637 'SeriesDescription' : '*MISMATCHED^VALUE*' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5638 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5639 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5640 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5641 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5642 # Universal matching matches any instance, even if the |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5643 # query is at the study-level, and thus if "SeriesDescription" |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5644 # makes no sense |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5645 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5646 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5647 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5648 'SeriesDescription' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5649 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5650 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5651 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5652 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5653 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5654 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5655 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5656 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5657 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5658 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5659 # At the study level, the "ProtocolName" tag is not allowed, but |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5660 # is wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5661 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5662 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5663 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5664 'ProtocolName' : 'NOPE' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5665 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5666 'Normalize' : False |
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|
5667 })) |
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|
5668 self.assertEqual(0, CountAnswers({ |
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diff
changeset
|
5669 'Level' : 'Study', |
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diff
changeset
|
5670 'Query' : { |
a2719263fd04
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diff
changeset
|
5671 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
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|
5672 }, |
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|
5673 'Normalize' : False |
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diff
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|
5674 })) |
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|
5675 self.assertEqual(1, CountAnswers({ |
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diff
changeset
|
5676 'Level' : 'Study', |
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diff
changeset
|
5677 'Query' : { |
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|
5678 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
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|
5679 }, |
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|
5680 'Normalize' : True |
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diff
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|
5681 })) |
a2719263fd04
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diff
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|
5682 self.assertEqual(1, CountAnswers({ |
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diff
changeset
|
5683 'Level' : 'Study', |
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diff
changeset
|
5684 'Query' : { |
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diff
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|
5685 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
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|
5686 }, |
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|
5687 'Normalize' : True |
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|
5688 })) |
a2719263fd04
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|
5689 |
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diff
changeset
|
5690 for normalize in [ True, False ]: |
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diff
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|
5691 # At the series level, the "ProtocolName" tag is allowed, and |
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diff
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|
5692 # normalization has no effect |
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|
5693 |
a2719263fd04
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diff
changeset
|
5694 self.assertEqual(1, CountAnswers({ |
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diff
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|
5695 'Level' : 'Series', |
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diff
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|
5696 'Query' : { |
a2719263fd04
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diff
changeset
|
5697 'ProtocolName' : '' # Universal matching |
a2719263fd04
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diff
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|
5698 }, |
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diff
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|
5699 'Normalize' : normalize, |
a2719263fd04
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diff
changeset
|
5700 })) |
a2719263fd04
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diff
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|
5701 self.assertEqual(0, CountAnswers({ |
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diff
changeset
|
5702 'Level' : 'Series', |
a2719263fd04
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diff
changeset
|
5703 'Query' : { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5704 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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|
5705 }, |
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diff
changeset
|
5706 'Normalize' : normalize, |
a2719263fd04
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diff
changeset
|
5707 })) |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5708 self.assertEqual(0, CountAnswers({ |
a2719263fd04
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parents:
262
diff
changeset
|
5709 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5710 'Query' : { |
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diff
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|
5711 'ProtocolName' : '*MISMATCHED^VALUE*' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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|
5712 }, |
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test_study_series_find_inconsistency
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diff
changeset
|
5713 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5714 })) |
a2719263fd04
test_study_series_find_inconsistency
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|
5715 |
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diff
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|
5716 self.assertEqual(1, CountAnswers({ |
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|
5717 'Level' : 'Study', |
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diff
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|
5718 'Query' : { |
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diff
changeset
|
5719 'ProtocolName' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5720 }, |
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test_study_series_find_inconsistency
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diff
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|
5721 'Normalize' : normalize, |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5722 })) |
a2719263fd04
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|
5723 |
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changeset
|
5724 |
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changeset
|
5725 ## |
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diff
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|
5726 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
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|
5727 ## |
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|
5728 |
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diff
changeset
|
5729 for level in [ 'Study', 'Series' ] : |
a2719263fd04
test_study_series_find_inconsistency
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diff
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|
5730 for normalize in [ True, False ]: |
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diff
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|
5731 self.assertEqual(1, CountAnswers({ |
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262
diff
changeset
|
5732 'Level' : level, |
a2719263fd04
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diff
changeset
|
5733 'Query' : { |
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diff
changeset
|
5734 'StudyInstanceUID' : '' # Universal matching |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
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|
5735 }, |
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test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5736 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5737 })) |
a2719263fd04
test_study_series_find_inconsistency
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diff
changeset
|
5738 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5739 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5740 'Query' : { |
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diff
changeset
|
5741 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5742 }, |
a2719263fd04
test_study_series_find_inconsistency
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262
diff
changeset
|
5743 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5744 })) |
a2719263fd04
test_study_series_find_inconsistency
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diff
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|
5745 self.assertEqual(1, CountAnswers({ |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5746 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5747 'Query' : { |
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262
diff
changeset
|
5748 'StudyInstanceUID' : '4.5.6' # This is the actual value |
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
5749 }, |
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test_study_series_find_inconsistency
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diff
changeset
|
5750 'Normalize' : normalize, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5751 })) |
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test_study_series_find_inconsistency
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diff
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|
5752 |
269 | 5753 # Wildcard matching is not allowed for this VR |
263
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diff
changeset
|
5754 # This test fails on Orthanc <= 1.5.8 |
269 | 5755 self.assertRaises(Exception, lambda: CountAnswers({ |
263
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|
5756 'Level' : level, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5757 'Query' : { |
269 | 5758 'StudyInstanceUID' : '*' |
263
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diff
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|
5759 }, |
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diff
changeset
|
5760 'Normalize' : normalize, |
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|
5761 })) |
265 | 5762 |
5763 | |
5764 def test_rendered(self): | |
5765 # New in Orthanc 1.6.0 | |
5766 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
5767 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5768 self.assertEqual("RGB", im.mode) | |
5769 self.assertEqual(41, im.size[0]) | |
5770 self.assertEqual(41, im.size[1]) | |
5771 | |
5772 # http://effbot.org/zone/pil-comparing-images.htm | |
5773 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
5774 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
5775 | |
5776 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
5777 self.assertEqual("RGB", im.mode) | |
5778 self.assertEqual(10, im.size[0]) | |
5779 self.assertEqual(10, im.size[1]) | |
5780 | |
5781 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
5782 self.assertEqual("RGB", im.mode) | |
5783 self.assertEqual(10, im.size[0]) | |
5784 self.assertEqual(10, im.size[1]) | |
5785 | |
5786 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
5787 self.assertEqual("RGB", im.mode) | |
5788 self.assertEqual(128, im.size[0]) | |
5789 self.assertEqual(128, im.size[1]) | |
5790 | |
5791 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
5792 self.assertEqual("RGB", im.mode) | |
5793 self.assertEqual(10, im.size[0]) | |
5794 self.assertEqual(10, im.size[1]) | |
5795 | |
5796 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
5797 self.assertEqual("RGB", im.mode) | |
5798 self.assertEqual(10, im.size[0]) | |
5799 self.assertEqual(10, im.size[1]) | |
5800 | |
5801 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
5802 self.assertEqual("RGB", im.mode) | |
5803 self.assertEqual(5, im.size[0]) | |
5804 self.assertEqual(5, im.size[1]) | |
5805 | |
5806 | |
5807 # Grayscale image | |
5808 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
5809 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5810 self.assertEqual("L", im.mode) | |
5811 self.assertEqual(288, im.size[0]) | |
5812 self.assertEqual(288, im.size[1]) | |
5813 self.assertEqual(0, im.getpixel((0, 0))) | |
5814 | |
5815 # Those are the original windowing parameters that are written | |
5816 # inside the DICOM file | |
5817 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
5818 self.assertEqual("L", im2.mode) | |
5819 self.assertEqual(288, im2.size[0]) | |
5820 self.assertEqual(288, im2.size[1]) | |
5821 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
5822 | |
5823 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
5824 self.assertEqual("L", im.mode) | |
5825 self.assertEqual(512, im.size[0]) | |
5826 self.assertEqual(512, im.size[1]) | |
5827 | |
5828 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
5829 self.assertEqual("L", im.mode) | |
5830 self.assertEqual(10, im.size[0]) | |
5831 self.assertEqual(10, im.size[1]) | |
5832 | |
5833 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
5834 self.assertEqual("L", im.mode) | |
5835 self.assertEqual(10, im.size[0]) | |
5836 self.assertEqual(10, im.size[1]) | |
5837 | |
5838 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
5839 self.assertEqual("L", im.mode) | |
5840 self.assertEqual(1, im.size[0]) | |
5841 self.assertEqual(1, im.size[1]) | |
5842 self.assertEqual(255, im.getpixel((0, 0))) | |
5843 | |
5844 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
5845 self.assertEqual("L", im.mode) | |
5846 self.assertEqual(1, im.size[0]) | |
5847 self.assertEqual(1, im.size[1]) | |
5848 self.assertEqual(0, im.getpixel((0, 0))) | |
5849 | |
5850 | |
5851 # Test monochrome 1 | |
5852 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
5853 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5854 self.assertEqual("L", im.mode) | |
5855 self.assertEqual(2010, im.size[0]) | |
5856 self.assertEqual(2446, im.size[1]) | |
5857 self.assertEqual(0, im.getpixel((0, 0))) | |
5858 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
5859 self.assertEqual("L", im.mode) | |
5860 self.assertEqual(20, im.size[0]) | |
5861 self.assertEqual(24, im.size[1]) | |
5862 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
5863 self.assertEqual("L", im.mode) | |
5864 self.assertEqual(20, im.size[0]) | |
5865 self.assertEqual(24, im.size[1]) | |
5866 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
5867 self.assertEqual("L", im.mode) | |
5868 self.assertEqual(10, im.size[0]) | |
5869 self.assertEqual(12, im.size[1]) | |
5870 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
5871 self.assertEqual("L", im.mode) | |
5872 self.assertEqual(20, im.size[0]) | |
5873 self.assertEqual(24, im.size[1]) | |
268
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5874 |
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5875 |
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5876 def test_bitbucket_issue_154(self): |
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5877 # "Matching against list of UID-s by C-MOVE" |
319 | 5878 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
268
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5879 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5880 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5881 |
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5882 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5883 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5884 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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5885 |
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5886 # C-FIND is working on list of UIDs |
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5887 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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5888 '-k', 'StudyInstanceUID=%s' % study, |
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5889 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5890 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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5891 self.assertEqual(2, len(series)) |
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5892 self.assertTrue(series1 in series) |
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5893 self.assertTrue(series2 in series) |
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5894 |
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5895 # Individual retrieval is working in Orthanc < 1.6.0 |
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5896 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5897 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5898 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5899 '-k', 'StudyInstanceUID=%s' % study, |
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5900 '-k', 'SeriesInstanceUID=%s' % series1, |
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5901 ]))) |
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5902 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5903 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5904 '-k', 'StudyInstanceUID=%s' % study, |
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5905 '-k', 'SeriesInstanceUID=%s' % series2, |
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5906 ]))) |
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5907 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5908 |
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5909 DropOrthanc(_LOCAL) |
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5910 |
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5911 # But list matching is working only in Orthanc >= 1.6.0 |
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5912 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5913 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5914 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5915 '-k', 'StudyInstanceUID=%s' % study, |
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5916 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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5917 ]))) |
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5918 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5919 |
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5920 |
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5921 def test_storage_commitment_api(self): |
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5922 # Storage commitment is available since Orthanc 1.6.0 |
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5923 |
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5924 def WaitTransaction(uid): |
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5925 while True: |
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5926 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5927 if s['Status'] != 'Pending': |
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5928 return s |
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5929 else: |
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5930 time.sleep(0.01) |
280
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5931 |
281 | 5932 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
279
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5933 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5934 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5935 |
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5936 # Against self |
281 | 5937 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5938 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
5939 }) ['ID'] | |
279
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5940 self.assertTrue(transaction.startswith('2.25.')) |
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5941 |
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5942 result = WaitTransaction(transaction) |
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5943 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5944 self.assertEqual('Success', result['Status']) |
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5945 self.assertEqual(1, len(result['Success'])) |
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5946 self.assertEqual(0, len(result['Failures'])) |
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5947 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5948 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5949 |
281 | 5950 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5951 "DicomInstances" : [ | |
5952 { 'SOPClassUID' : sopClassUid, | |
5953 'SOPInstanceUID' : sopInstanceUid }, | |
5954 ], | |
5955 }) | |
5956 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
5957 self.assertEqual(result, WaitTransaction(transaction)) | |
5958 | |
5959 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
5960 "Resources" : [ | |
5961 instance['ID'], | |
5962 instance['ParentSeries'], | |
5963 instance['ParentStudy'], | |
5964 instance['ParentPatient'], | |
5965 ] | |
5966 }) | |
280
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5967 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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5968 self.assertEqual(result, WaitTransaction(transaction)) |
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5969 |
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5970 |
281 | 5971 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5972 "DicomInstances" : [ | |
5973 [ 'nope', 'nope2' ], | |
5974 [ sopClassUid, sopInstanceUid ], | |
5975 ], | |
5976 }) ['ID'] | |
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5977 self.assertTrue(transaction.startswith('2.25.')) |
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5978 |
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5979 result = WaitTransaction(transaction) |
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5980 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5981 self.assertEqual('Failure', result['Status']) |
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5982 self.assertEqual(1, len(result['Success'])) |
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5983 self.assertEqual(1, len(result['Failures'])) |
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5984 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5985 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5986 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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5987 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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5988 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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5989 |
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5990 # Cannot remove items from a failed storage commitment transaction |
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5991 self.assertRaises(Exception, lambda: |
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5992 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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5993 |
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5994 |
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5995 # Against Orthanc 0.8.6, that does not support storage commitment |
509
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5996 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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5997 self.assertRaises(Exception, lambda: |
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
5998 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
5999 "DicomInstances" : [ |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6000 [ sopClassUid, sopInstanceUid ], |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6001 ] |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6002 })) |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6003 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6004 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6005 |
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
6006 def test_storage_commitment_store(self): |
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
6007 # Storage commitment is available since Orthanc 1.6.0 |
280
5daa3896981c
testing storage commitment reports
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parents:
279
diff
changeset
|
6008 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6009 def WaitTransaction(uid): |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6010 while True: |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6011 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6012 if s['Status'] != 'Pending': |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6013 return s |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6014 else: |
342
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6015 time.sleep(0.01) |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6016 |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6017 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
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269
diff
changeset
|
6018 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
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269
diff
changeset
|
6019 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6020 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6021 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6022 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6023 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6024 'Resources' : [ i ], |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6025 'StorageCommitment' : True, |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6026 })) |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6027 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6028 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6029 'Resources' : [ i ], |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6030 'StorageCommitment' : False, |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6031 }) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6032 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6033 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6034 j = DoPost(_REMOTE, '/modalities/self/store', { |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6035 'Resources' : [ i ], |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6036 'StorageCommitment' : True, |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6037 }) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6038 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6039 transaction = j['StorageCommitmentTransactionUID'] |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6040 self.assertTrue(transaction.startswith('2.25.')) |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6041 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6042 result = WaitTransaction(transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6043 self.assertEqual('ORTHANC', result['RemoteAET']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6044 self.assertEqual('Success', result['Status']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6045 self.assertEqual(1, len(result['Success'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6046 self.assertEqual(0, len(result['Failures'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6047 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6048 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6049 result['Success'][0]['SOPInstanceUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6050 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6051 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6052 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
6053 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6054 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6055 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6056 def test_store_straight(self): # New in Orthanc 1.6.1 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6057 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6058 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6059 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6060 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6061 dicom = f.read() |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6062 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6063 self.assertRaises(Exception, lambda: DoPost( |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6064 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6065 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6066 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6067 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6068 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6069 answer['SOPClassUID']) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6070 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6071 answer['SOPInstanceUID']) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6072 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6073 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6074 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6075 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6076 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6077 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6078 # Add a RLE-encoded DICOM file |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6079 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6080 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6081 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6082 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6083 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6084 # Export the instance, with transcoding: "_REMOTE" is the |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6085 # Orthanc server being tested |
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6086 try: |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6087 DoDelete(_REMOTE, '/modalities/toto') |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6088 except: |
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6089 pass |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6090 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6091 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6092 DoPut(_REMOTE, '/modalities/toto', params) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6093 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6094 j = DoGet(_LOCAL, '/instances') |
4a70411ac9ad
test_storescu_transcoding
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285
diff
changeset
|
6095 self.assertEqual(1, len(j)) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6096 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6097 self.assertTrue(uncompressedSize > rleSize / 2) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6098 |
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6099 # Export, with transcoding disabled => this fails with 0.8.6 but not with more recent versions |
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6100 params['AllowTranscoding'] = False |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6101 DoPut(_REMOTE, '/modalities/toto', params) |
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6102 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6103 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6104 else: |
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6105 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
378
a4b8450a1158
fix test_storescu_transcoding
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6106 DoDelete(_REMOTE, '/modalities/toto') |
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6107 |
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test_bitbucket_issue_169
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|
6108 |
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6109 def test_bitbucket_issue_169(self): |
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6110 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
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6111 dicom = bz2.decompress(f.read()) |
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6112 |
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6113 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
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6114 |
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6115 self.assertEqual(44350560, len(dicom)) |
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6116 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
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6117 |
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6118 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
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6119 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
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6120 |
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6121 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6122 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
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6123 j = DoGet(_LOCAL, '/instances') |
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6124 self.assertEqual(1, len(j)) |
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6125 |
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6126 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
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6127 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
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6128 # Little Endian" (1.2.840.10008.1.2) |
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6129 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
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6130 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
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6131 |
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6132 # In Orthanc <= 1.6.1, the value of the private tags was lost |
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6133 # because of this transcoding |
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6134 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
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6135 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
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6136 |
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6137 |
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test_modify_transcode_study
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diff
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6138 def test_modify_transcode_instance(self): |
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6139 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
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6140 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
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6141 DoGet(_REMOTE, '/instances/%s/file' % i))) |
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6142 |
299
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diff
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6143 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
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6144 self.assertTrue(len(a) > 20) |
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6145 |
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6146 SYNTAXES = [ |
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|
6147 '1.2.840.10008.1.2', |
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diff
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|
6148 '1.2.840.10008.1.2.1', |
300
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diff
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|
6149 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
299
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6150 '1.2.840.10008.1.2.2', |
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6151 '1.2.840.10008.1.2.4.50', |
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|
6152 '1.2.840.10008.1.2.4.51', |
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diff
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|
6153 '1.2.840.10008.1.2.4.57', |
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|
6154 '1.2.840.10008.1.2.4.70', |
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|
6155 ] |
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diff
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|
6156 |
304 | 6157 if HasGdcmPlugin(_REMOTE): |
299
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|
6158 SYNTAXES = SYNTAXES + [ |
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6159 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
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|
6160 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
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|
6161 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
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HasGdcmPlugin() test
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|
6162 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
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diff
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|
6163 ] |
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HasGdcmPlugin() test
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diff
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|
6164 |
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HasGdcmPlugin() test
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diff
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|
6165 for syntax in SYNTAXES: |
291
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diff
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|
6166 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
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diff
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|
6167 'Transcode' : syntax, |
299
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6168 'Keep' : [ 'SOPInstanceUID' ], |
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6169 'Force' : True, |
291
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test_modify_transcode
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diff
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|
6170 }) |
cfa785074c64
test_modify_transcode
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diff
changeset
|
6171 |
cfa785074c64
test_modify_transcode
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diff
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|
6172 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
292
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test_archive_transcode
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|
6173 |
299
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|
6174 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
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|
6175 self.assertTrue(len(b) > 20) |
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diff
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6176 if syntax in [ '1.2.840.10008.1.2.4.50', |
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|
6177 '1.2.840.10008.1.2.4.51', |
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diff
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|
6178 '1.2.840.10008.1.2.4.81', |
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diff
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|
6179 '1.2.840.10008.1.2.4.91' ]: |
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diff
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|
6180 # Lossy transcoding: The SOP instance UID must have changed |
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|
6181 self.assertNotEqual(a, b) |
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|
6182 else: |
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HasGdcmPlugin() test
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diff
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|
6183 self.assertEqual(a, b) |
292
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test_archive_transcode
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|
6184 |
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test_archive_transcode
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diff
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|
6185 def test_archive_transcode(self): |
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test_archive_transcode
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6186 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
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test_archive_transcode
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6187 |
293
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diff
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|
6188 # GET on "/media" |
292
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6189 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
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6190 self.assertEqual(2, len(z.namelist())) |
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6191 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
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diff
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|
6192 |
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test_archive_transcode
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|
6193 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
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|
6194 |
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test_archive_transcode
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diff
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|
6195 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
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6196 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
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|
6197 |
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test_archive_transcode
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|
6198 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
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6199 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
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diff
changeset
|
6200 |
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test_archive_transcode
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|
6201 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
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|
6202 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
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|
6203 |
293
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diff
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|
6204 |
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|
6205 # POST on "/media" |
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|
6206 self.assertRaises(Exception, lambda: PostArchive( |
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6207 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
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diff
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|
6208 |
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|
6209 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
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6210 'Transcode' : '1.2.840.10008.1.2.4.50', |
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6211 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6212 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6213 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6214 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6215 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6216 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6217 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6218 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6219 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6220 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6221 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6222 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6223 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6224 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6225 # GET on "/archive" |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6226 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6227 self.assertEqual(1, len(z.namelist())) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6228 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6229 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6230 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6231 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6232 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6233 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6234 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6235 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6236 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6237 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6238 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6239 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6240 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6241 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6242 # POST on "/archive" |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6243 self.assertRaises(Exception, lambda: PostArchive( |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6244 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6245 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6246 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6247 'Transcode' : '1.2.840.10008.1.2.4.50', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6248 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6249 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6250 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6251 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6252 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6253 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6254 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6255 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6256 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6257 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6258 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6259 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6260 |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6261 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6262 # "/tools/create-*" |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6263 z = PostArchive(_REMOTE, '/tools/create-archive', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6264 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6265 'Transcode' : '1.2.840.10008.1.2.4.50', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6266 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6267 self.assertEqual(1, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6268 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6269 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6270 z = PostArchive(_REMOTE, '/tools/create-media', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6271 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6272 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6273 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6274 self.assertEqual(2, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6275 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6276 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6277 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6278 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6279 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6280 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6281 self.assertEqual(2, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6282 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6283 |
308 | 6284 |
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6285 def test_modify_keep_source(self): |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6286 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6287 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6288 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6289 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6290 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6291 'Replace' : { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6292 'StationName' : 'TEST', |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6293 }, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6294 'KeepSource' : True, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6295 }) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6296 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6297 s = DoGet(_REMOTE, '/studies') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6298 self.assertEqual(2, len(s)) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6299 self.assertTrue(i['ParentStudy'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6300 self.assertTrue(j['ID'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6301 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6302 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6303 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6304 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6305 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6306 'Replace' : { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6307 'StationName' : 'TEST', |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6308 }, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6309 'KeepSource' : False, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6310 }) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6311 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6312 s = DoGet(_REMOTE, '/studies') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6313 self.assertEqual(1, len(s)) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6314 self.assertFalse(i['ParentStudy'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6315 self.assertTrue(j['ID'] in s) |
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6316 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6317 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6318 def test_modify_transcode_study(self): |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6319 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6320 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6321 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6322 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6323 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6324 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6325 'Transcode' : '1.2.840.10008.1.2.4.50', |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6326 'KeepSource' : False |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6327 }) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6328 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6329 k = DoGet(_REMOTE, '/instances') |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6330 self.assertEqual(1, len(k)) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6331 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6332 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6333 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6334 |
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6335 |
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6336 def test_modify_need_force_to_change_uids(self): |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6337 def Modify(level, resourceId, replaceTags, force, keepSource): |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6338 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6339 'Replace' : replaceTags, |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6340 'Force': force, |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6341 'KeepSource' : keepSource |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6342 }) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6343 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6344 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6345 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6346 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6347 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6348 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6349 # can not change the StudyInstanceUID unless you force it |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6350 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6351 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6352 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6353 # can not change the SeriesInstanceUID unless you force it |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6354 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6355 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6356 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6357 # can not change the SOPInstanceUID unless you force it |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6358 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6359 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6360 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6361 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6362 # can not change the PatientID of a study unless you force it |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6363 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6364 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6365 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6366 |
500 | 6367 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6368 # this was forbidden even with Force=true till 1.11.2 included |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6369 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6370 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6371 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6372 |
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6373 |
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6374 def test_modify_study_module_reconstruction(self): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6375 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6376 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6377 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6378 if dropOrthanc: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6379 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6380 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6381 UploadFolder(_REMOTE, 'Knee/T1') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6382 UploadFolder(_REMOTE, 'Knee/T2') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6383 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6384 if dropOrthanc: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6385 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6386 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6387 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6388 'Replace' : replaceTags, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6389 'Force': force, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6390 'KeepSource' : keepSource |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6391 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6392 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6393 return (modifyResponse, modifiedResource) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6394 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6395 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6396 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6397 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6398 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6399 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6400 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6401 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6402 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6403 ####### study level tests ####### |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6404 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6405 # modify study description and make sure the MainDicomTags are updated |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6406 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6407 'StudyInstanceUID': kneeStudyInstanceUID, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6408 'StudyDescription': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6409 }, force=True, keepSource=True) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6410 self.assertEqual(kneeStudy, modifyResponse['ID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6411 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6412 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6413 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6414 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6415 'StudyInstanceUID': kneeStudyInstanceUID, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6416 'PatientName': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6417 }, force=True, keepSource=True) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6418 self.assertEqual(kneeStudy, modifyResponse['ID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6419 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6420 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6421 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6422 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6423 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6424 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6425 'StudyInstanceUID': kneeStudyInstanceUID, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6426 'PatientID': 'TOTO_ID', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6427 'PatientName': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6428 }, force=True, keepSource=True) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6429 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6430 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6431 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6432 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6433 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6434 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6435 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6436 ####### series level tests ####### |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6437 # modify series description and make sure the MainDicomTags are updated |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6438 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6439 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6440 'StudyInstanceUID': kneeStudyInstanceUID, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6441 'SeriesDescription': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6442 }, force=True, keepSource=True) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6443 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6444 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6445 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6446 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6447 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6448 def test_rename_patient_with_multiple_studies(self): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6449 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6450 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6451 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6452 patientDicomId = 'TEST_1' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6453 patientName = 'Test' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6454 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6455 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6456 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6457 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6458 UploadFolder(_REMOTE, 'PatientWith2studies') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6459 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6460 # each sub-test is in a dedicated 'if' for clarity |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6461 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6462 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6463 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6464 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6465 'Replace' : {'PatientName': "TOTO"}, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6466 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6467 'KeepSource' : True |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6468 })) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6469 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6470 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6471 # rename the patient (at patient level) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6472 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6473 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6474 'PatientName': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6475 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6476 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6477 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6478 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6479 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6480 # make sure the patient name has been edited at patient level |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6481 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6482 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6483 # there should only be 2 studies since we have set KeepSource=False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6484 self.assertEqual(2, len(modifiedPatient['Studies'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6485 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6486 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6487 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6488 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6489 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6490 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6491 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6492 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6493 UploadFolder(_REMOTE, 'PatientWith2studies') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6494 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6495 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6496 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6497 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6498 'PatientName': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6499 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6500 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6501 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6502 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6503 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6504 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6505 # make sure tha patient name has been edited at patient level |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6506 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6507 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6508 # there should only be 2 studies since we have set KeepSource=False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6509 self.assertEqual(2, len(modifiedPatient['Studies'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6510 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6511 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6512 # the StudyInstanceUID shall not have changed |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6513 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6514 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6515 # the DB model of parent shall have been reconstructed |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6516 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6517 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6518 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6519 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6520 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6521 # would have the same orthanc ids as the source ids -> they would be deleted |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6522 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6523 'Replace' : {'PatientName': "TOTO"}, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6524 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6525 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6526 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6527 })) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6528 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6529 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6530 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6531 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6532 UploadFolder(_REMOTE, 'PatientWith2studies') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6533 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6534 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6535 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6536 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6537 'PatientName': 'TOTO' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6538 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6539 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6540 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6541 'KeepSource' : True |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6542 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6543 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6544 # make sure tha patient name has been edited at patient level |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6545 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6546 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6547 # there should only be 2 studies since we have set KeepSource=False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6548 self.assertEqual(2, len(modifiedPatient['Studies'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6549 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6550 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6551 # the StudyInstanceUID shall not have changed |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6552 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6553 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6554 # the DB model of parent shall have been reconstructed |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6555 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6556 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6557 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6558 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6559 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6560 # try to attach the knee study to an existing patient |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6561 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6562 UploadFolder(_REMOTE, 'PatientWith2studies') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6563 UploadFolder(_REMOTE, 'Knee/T1') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6564 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6565 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6566 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6567 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6568 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6569 # this should fail if only specifying the PatientID |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6570 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6571 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6572 'PatientID': 'TEST_1' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6573 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6574 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6575 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6576 })) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6577 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6578 # this should fail if specifying all tags but one of them is not correct |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6579 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6580 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6581 'PatientID': 'TEST_1', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6582 'PatientName': 'Test', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6583 'PatientBirthDate': '19000101', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6584 'PatientSex': 'F' # this is wrong ! |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6585 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6586 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6587 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6588 })) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6589 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6590 # this should fail if specifying a tag that is not defined in DB for that patient |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6591 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6592 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6593 'PatientID': 'TEST_1', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6594 'PatientName': 'Test', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6595 'PatientBirthDate': '19000101', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6596 'PatientSex': 'M', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6597 '0010,1000': 'TUTU' # this does not exist in DB |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6598 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6599 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6600 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6601 })) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6602 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6603 # this should now work with all correct tags |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6604 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6605 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6606 'PatientID': 'TEST_1', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6607 'PatientName': 'Test', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6608 'PatientBirthDate': '19000101', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6609 'PatientSex': 'M' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6610 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6611 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6612 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6613 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6614 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6615 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6616 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6617 # make sure tha patient name remains the same at patient level |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6618 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6619 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6620 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6621 if True: |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6622 # try to edit patient in Knee (only study from this patient) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6623 DropOrthanc(_REMOTE) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6624 UploadFolder(_REMOTE, 'PatientWith2studies') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6625 UploadFolder(_REMOTE, 'Knee/T1') |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6626 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6627 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6628 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6629 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6630 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6631 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6632 # try to change the PatientName and StudyDescription at study level. |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6633 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6634 'Replace' : { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6635 'PatientName': 'Test Knee', |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6636 'StudyDescription': 'Knee study' |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6637 }, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6638 'Keep': ['StudyInstanceUID'], |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6639 'Force': True, |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6640 'KeepSource' : False |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6641 }) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6642 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6643 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6644 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6645 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6646 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6647 |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6648 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6649 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6650 'Replace' : { |
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6651 'PatientName': 'Test Knee 2', |
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6652 'PatientID': 'TEST_KNEE_2', |
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6653 'StudyDescription': 'Knee study 2' |
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6654 }, |
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6655 'Force': True, |
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6656 'KeepSource' : False |
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|
6657 }) |
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|
6658 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
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6659 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
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6660 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
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6661 # reload the patient, now, its orthanc id has changed |
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6662 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
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6663 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
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6664 # the previous patient shall not exist anymore |
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6665 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
498
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6666 |
305
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6667 def test_store_peer_transcoding(self): |
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6668 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
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6669 |
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6670 SYNTAXES = [ |
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6671 '1.2.840.10008.1.2', |
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6672 '1.2.840.10008.1.2.1', |
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6673 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
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6674 '1.2.840.10008.1.2.2', |
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6675 '1.2.840.10008.1.2.4.50', |
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6676 '1.2.840.10008.1.2.4.51', |
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6677 '1.2.840.10008.1.2.4.57', |
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6678 '1.2.840.10008.1.2.4.70', |
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6679 ] |
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6680 |
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6681 if HasGdcmPlugin(_REMOTE): |
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6682 SYNTAXES = SYNTAXES + [ |
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6683 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
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6684 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
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6685 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
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6686 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
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6687 ] |
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6688 |
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6689 for syntax in SYNTAXES: |
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6690 body = { |
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6691 'Resources' : [ i ], |
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6692 } |
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|
6693 |
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6694 if syntax != '1.2.840.10008.1.2.1': |
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6695 body['Transcode'] = syntax |
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6696 |
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6697 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6698 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6699 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
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6700 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6701 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6702 self.assertEqual(syntax, GetTransferSyntax( |
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6703 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
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6704 |
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|
6705 DropOrthanc(_LOCAL) |
308 | 6706 |
6707 | |
295 | 6708 def test_getscu(self): |
307 | 6709 def CleanTarget(): |
6710 if os.path.isdir('/tmp/GETSCU'): | |
6711 shutil.rmtree('/tmp/GETSCU') | |
6712 os.makedirs('/tmp/GETSCU') | |
6713 | |
306
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6714 env = {} |
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|
6715 if _DOCKER: |
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6716 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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6717 # and running in a GNU/Linux distribution running DCMTK |
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6718 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
529 | 6719 env['DCMDICTPATH'] = os.environ.get('DCMDICTPATH', '/usr/share/libdcmtk2/dicom.dic') |
306
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6720 |
295 | 6721 # no transcoding required |
307 | 6722 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
6723 | |
6724 CleanTarget() | |
295 | 6725 |
306
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|
6726 subprocess.check_call([ |
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|
6727 FindExecutable('getscu'), |
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|
6728 _REMOTE['Server'], |
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|
6729 str(_REMOTE['DicomPort']), |
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|
6730 '-aec', 'ORTHANC', |
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|
6731 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
307 | 6732 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
306
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|
6733 '-k', '0008,0052=STUDY', |
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|
6734 '--output-directory', '/tmp/GETSCU/' |
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|
6735 ], env = env) |
295 | 6736 |
311 | 6737 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
6738 self.assertTrue(os.path.isfile(f1)) | |
6739 with open(f1, 'rb') as f: | |
543 | 6740 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
311 | 6741 |
307 | 6742 CleanTarget() |
295 | 6743 |
6744 # transcoding required | |
311 | 6745 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
307 | 6746 |
6747 subprocess.check_call([ | |
6748 FindExecutable('getscu'), | |
6749 _REMOTE['Server'], | |
6750 str(_REMOTE['DicomPort']), | |
6751 '-aec', 'ORTHANC', | |
6752 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
311 | 6753 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
307 | 6754 '-k', '0008,0052=STUDY', |
6755 '--output-directory', '/tmp/GETSCU/' | |
6756 ], env = env) | |
6757 | |
311 | 6758 self.assertTrue(os.path.isfile(f1)) |
6759 with open(f1, 'rb') as f: | |
543 | 6760 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
311 | 6761 |
6762 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
6763 # (LittleEndianExplicit is proposed by default by "getscu") | |
6764 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
6765 self.assertTrue(os.path.isfile(f2)) | |
6766 with open(f2, 'rb') as f: | |
6767 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
324
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6768 |
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6769 |
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6770 def test_findscu_truncation(self): |
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6771 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
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6772 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
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6773 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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6774 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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6775 |
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6776 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
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6777 |
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6778 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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6779 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6780 self.assertEqual(2, len(result)) |
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6781 |
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|
6782 # The "StudyInstanceUID" is set as a list of 5 times the same |
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6783 # study, leading to a string of 249 characters |
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6784 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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6785 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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6786 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6787 self.assertEqual(1, len(result)) |
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6788 |
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6789 # The "StudyInstanceUID" is set as a list of 6 times the same |
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6790 # study, leading to a string of 299 characters. In Orthanc <= |
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6791 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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6792 # == 256, and is thus wiped out by C-FIND SCP. As a |
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6793 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
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6794 # "StudyInstanceUID" and returns all the available |
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6795 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
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6796 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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6797 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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6798 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6799 self.assertEqual(1, len(result)) |
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6800 |
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6801 |
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6802 def test_store_compressed(self): |
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6803 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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6804 dicom = f.read() |
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6805 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
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6806 sourceSize = len(dicom) |
324
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6807 |
328
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6808 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6809 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6810 |
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6811 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
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6812 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
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6813 _REMOTE, '/peers/peer/store', { |
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6814 'Resources' : [ i ], |
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6815 'Synchronous' : False, |
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6816 })) |
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6817 |
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6818 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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6819 self.assertFalse(job['Content']['Compress']) |
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6820 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
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6821 self.assertEqual(str(sourceSize), job['Content']['Size']) |
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6822 |
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6823 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6824 DropOrthanc(_LOCAL) |
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6825 |
509
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6826 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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6827 # Sending to the local Orthanc 0.8.6 server, with compression: |
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6828 # Not supported by Orthanc 0.8.6 => failure |
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6829 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
328
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6830 'Resources' : [ i ], |
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6831 'Compress' : True, |
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6832 })) |
509
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6833 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6834 |
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6835 # Sending to the tested remote server, with compression: OK |
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6836 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
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6837 _REMOTE, '/peers/self/store', { |
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6838 'Resources' : [ i ], |
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6839 'Compress' : True, |
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6840 'Synchronous' : False, |
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|
6841 })) |
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parents:
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diff
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|
6842 |
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|
6843 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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6844 self.assertTrue(job['Content']['Compress']) |
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|
6845 |
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6846 # Compression must have divided the size of the sent data at least twice |
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6847 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
332 | 6848 |
6849 | |
6850 def test_move_ambra(self): | |
6851 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
6852 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
6853 | |
6854 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
6855 | |
6856 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6857 '--study', | |
6858 '-k', 'StudyInstanceUID=' | |
6859 ]))) | |
6860 | |
6861 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6862 '--study', | |
6863 '-k', 'AccessionNumber=', | |
6864 ]))) | |
6865 | |
6866 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6867 '--study', | |
6868 '-k', 'AccessionNumber=', | |
6869 '-k', 'StudyInstanceUID=' | |
6870 ]))) | |
6871 | |
6872 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6873 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6874 '--study', | |
6875 '-k', 'AccessionNumber=CT16000988', | |
6876 '-k', 'StudyInstanceUID=', | |
6877 ]))) | |
6878 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6879 DropOrthanc(_LOCAL) | |
6880 | |
6881 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6882 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6883 '--study', | |
6884 '-k', 'AccessionNumber=CT16000988', | |
6885 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
6886 ]))) | |
6887 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6888 DropOrthanc(_LOCAL) | |
6889 | |
6890 # This fails on Orthanc <= 1.7.3 | |
6891 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6892 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6893 '--study', | |
6894 '-k', 'AccessionNumber=', | |
6895 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
6896 ]))) | |
6897 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6898 DropOrthanc(_LOCAL) | |
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6899 |
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6900 |
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|
6901 def test_decode_elscint(self): |
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6902 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
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|
6903 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
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|
6904 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
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|
6905 |
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diff
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|
6906 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
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6907 self.assertEqual("L", im.mode) |
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6908 self.assertEqual(512, im.size[0]) |
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6909 self.assertEqual(512, im.size[1]) |
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6910 |
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|
6911 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
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6912 self.assertEqual("L", im.mode) |
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6913 self.assertEqual(512, im.size[0]) |
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6914 self.assertEqual(512, im.size[1]) |
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6915 |
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|
6916 # The two tests below fail on Orthanc <= 1.7.3 |
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6917 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
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6918 self.assertEqual(512 * 512 * 2, len(raw)) |
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6919 |
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6920 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
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6921 self.assertEqual(512 * 512 * 2, len(raw)) |
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6922 |
334
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6923 |
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6924 def test_rest_modalities_in_study_2(self): |
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6925 # Problem reported by Alain Mazy on 2020-09-15 |
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6926 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
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6927 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
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6928 |
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6929 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
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6930 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
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6931 self.assertEqual(1, len(modalitiesInStudy)) |
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6932 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
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6933 |
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|
6934 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
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|
6935 # The empty string '' corresponds to universal matching. |
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|
6936 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
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|
6937 |
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diff
changeset
|
6938 if i in [ 'UX', 'UX\\MR' ]: |
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|
6939 expected = 0 |
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|
6940 else: |
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diff
changeset
|
6941 expected = 1 |
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diff
changeset
|
6942 |
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6943 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6944 'Query' : { 'ModalitiesInStudy' : i }}) |
335
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diff
changeset
|
6945 self.assertEqual(expected, len(a)) |
334
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test_rest_modalities_in_study_2
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diff
changeset
|
6946 |
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6947 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6948 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
335
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diff
changeset
|
6949 self.assertEqual(expected, len(studyInstanceUid)) |
337
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diff
changeset
|
6950 |
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diff
changeset
|
6951 |
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diff
changeset
|
6952 def test_webdav(self): |
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diff
changeset
|
6953 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
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diff
changeset
|
6954 |
342
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diff
changeset
|
6955 for suffix in [ '', '/' ]: |
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diff
changeset
|
6956 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
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diff
changeset
|
6957 self.assertEqual(1, len(f)) |
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diff
changeset
|
6958 self.assertTrue('/webdav/' in f.keys()) |
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diff
changeset
|
6959 self.assertTrue(f['/webdav/']['folder']) |
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diff
changeset
|
6960 self.assertEqual('webdav', f['/webdav/']['displayname']) |
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diff
changeset
|
6961 |
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diff
changeset
|
6962 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
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diff
changeset
|
6963 self.assertEqual(6, len(f)) |
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diff
changeset
|
6964 self.assertTrue(f['/webdav/']['folder']) |
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diff
changeset
|
6965 self.assertEqual('webdav', f['/webdav/']['displayname']) |
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diff
changeset
|
6966 |
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341
diff
changeset
|
6967 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
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diff
changeset
|
6968 self.assertTrue(f['/webdav/%s' % i]['folder']) |
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diff
changeset
|
6969 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
bf8369ea3ff1
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diff
changeset
|
6970 |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6971 for depth in [ 0, 1 ]: |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6972 for suffix2 in [ '', '/' ]: |
bf8369ea3ff1
more tests of webdav
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diff
changeset
|
6973 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
bf8369ea3ff1
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diff
changeset
|
6974 |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6975 if i == 'uploads': |
bf8369ea3ff1
more tests of webdav
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diff
changeset
|
6976 # Empty folders might still exist in "/uploads/" |
bf8369ea3ff1
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341
diff
changeset
|
6977 self.assertTrue('/webdav/uploads/' in g) |
bf8369ea3ff1
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diff
changeset
|
6978 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
bf8369ea3ff1
more tests of webdav
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diff
changeset
|
6979 for j in g.items(): |
bf8369ea3ff1
more tests of webdav
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diff
changeset
|
6980 self.assertTrue(g.items()[0][1]['folder']) |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6981 else: |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6982 self.assertEqual(1, len(g)) |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6983 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6984 self.assertTrue(g.items()[0][1]['folder']) |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6985 self.assertEqual(i, g.items()[0][1]['displayname']) |
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6986 |
342
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6987 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6988 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6989 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6990 |
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6991 while len(DoGet(_REMOTE, '/patients')) == 0: |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6992 time.sleep(0.01) |
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6993 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6994 |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6995 |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6996 def test_log_categories(self): |
350 | 6997 original = DoGet(_REMOTE, '/tools/log-level-http') |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6998 |
350 | 6999 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
7000 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7001 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7002 |
350 | 7003 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
7004 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7005 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7006 |
350 | 7007 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
7008 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7009 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7010 |
350 | 7011 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7012 |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7013 # Switch back to the original log level |
350 | 7014 DoPut(_REMOTE, '/tools/log-level-http', original) |
7015 | |
7016 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7017 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7018 |
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
7019 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
357 | 7020 |
7021 | |
7022 def test_upload_zip(self): | |
7023 f = StringIO() | |
7024 with zipfile.ZipFile(f, 'w') as z: | |
7025 z.writestr('hello/world/invalid.txt', 'Hello world') | |
7026 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
7027 c = g.read() | |
7028 z.writestr('hello/world/dicom1.dcm', c) | |
7029 z.writestr('hello/world/dicom2.dcm', c) | |
7030 | |
7031 f.seek(0) | |
7032 i = DoPost(_REMOTE, '/instances', f.read()) | |
7033 | |
7034 self.assertEqual(2, len(i)) | |
7035 self.assertEqual(i[0], i[1]) | |
7036 self.assertEqual(6, len(i[0])) | |
7037 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
7038 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
7039 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
7040 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
7041 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
7042 | |
7043 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
7044 self.assertEqual('Success', i[0]['Status']) | |
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7045 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7046 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7047 def test_transfer_syntax_no_metaheader(self): |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7048 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7049 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7050 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7051 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7052 # This fails on Orthanc <= 1.8.1 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7053 self.assertTrue('TransferSyntax' in m) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7054 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7055 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7056 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7057 def test_upload_multipart_1(self): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7058 # This tests the "Upload" button in Orthanc Explorer |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7059 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
7060 def EncodeChunk(data, boundary, filename): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7061 return (('--%s\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
7062 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7063 '\r\n%s\r\n') % (boundary, filename, data)) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7064 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
7065 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7066 dcm1 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
7067 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
7068 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7069 dcm2 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7070 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7071 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7072 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7073 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7074 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7075 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7076 '--' + boundary + '--'), headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7077 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7078 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7079 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7080 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7081 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7082 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7083 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7084 def test_upload_multipart_2(self): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7085 # This tests the "maxChunkSize" option of "jQuery File Upload |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7086 # 5.12", whose source code can be found in: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7087 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7088 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7089 def EncodeBody(data, boundary, filename): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7090 return (('--%s\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7091 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7092 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7093 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7094 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7095 dcm = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7096 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7097 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7098 dcm2 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7099 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7100 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7101 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7102 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7103 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7104 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7105 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7106 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7107 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7108 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7109 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7110 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7111 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7112 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7113 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7114 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7115 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7116 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7117 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7118 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7119 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7120 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7121 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7122 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7123 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7124 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7125 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7126 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7127 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7128 'X-File-Name' : 'ColorTestMalaterre.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7129 'X-File-Size' : str(len(dcm2)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7130 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7131 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7132 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7133 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7134 # Upload the last chunk => the file is now entirely available |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7135 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7136 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7137 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7138 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7139 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7140 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7141 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7142 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7143 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7144 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7145 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7146 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7147 def test_pixel_data_offset(self): |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7148 # New in Orthanc 1.9.1 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7149 def Check(path, offset): |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7150 i = UploadInstance(_REMOTE, path) ['ID'] |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7151 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7152 self.assertEqual(offset, metadata) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7153 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7154 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7155 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7156 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7157 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7158 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7159 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7160 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7161 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7162 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7163 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7164 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
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|
7165 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
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7166 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
382
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7167 |
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7168 |
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7169 def test_peer_store_straight(self): |
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7170 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
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7171 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
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7172 |
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7173 peer = DoGet(_REMOTE, '/peers/peer/system') |
509
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|
7174 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 6): |
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7175 self.assertEqual(3, len(peer)) |
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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7176 self.assertEqual(5, peer['DatabaseVersion']) |
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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|
7177 self.assertEqual('MyOrthanc', peer['Name']) |
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|
7178 self.assertEqual('0.8.6', peer['Version']) |
382
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|
7179 |
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7180 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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7181 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
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changeset
|
7182 |
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7183 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
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7184 # "ParentStudy", "ParentSeries" are not reported |
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|
7185 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
7186 self.assertEqual(3, len(j)) |
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|
7187 else: |
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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|
7188 self.assertEqual(6, len(j)) |
382
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7189 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
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7190 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
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7191 self.assertEqual('Success', j['Status']) |
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|
7192 |
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7193 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
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7194 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
383 | 7195 |
7196 | |
7197 def test_cp246(self): | |
7198 # This fails on Orthanc <= 1.9.0 | |
7199 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
7200 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
7201 | |
7202 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
7203 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
7204 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
7205 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
7206 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
7207 | |
7208 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
7209 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
7210 | |
7211 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
7212 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
7213 | |
7214 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
7215 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
7216 | |
391
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diff
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|
7217 |
392
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diff
changeset
|
7218 def test_revisions_metadata(self): |
391
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7219 # This test fails on Orthanc <= 1.9.1 (support for revisions |
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7220 # was introduced in 1.9.2), or if configuration option |
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changeset
|
7221 # "CheckRevisions" is "False". Conventions for HTTP headers |
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changeset
|
7222 # related to revisions mimic CouchDB: |
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diff
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|
7223 # https://docs.couchdb.org/en/stable/api/document/common.html |
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|
7224 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
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changeset
|
7225 |
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diff
changeset
|
7226 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
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|
7227 self.assertEqual('200', headers['status']) |
397
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diff
changeset
|
7228 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
391
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changeset
|
7229 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
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diff
changeset
|
7230 |
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diff
changeset
|
7231 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
397
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diff
changeset
|
7232 'If-None-Match' : '"aaa"' |
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diff
changeset
|
7233 }) |
eb87ec525b53
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diff
changeset
|
7234 self.assertEqual('400', headers['status']) # Bad header format |
eb87ec525b53
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diff
changeset
|
7235 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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394
diff
changeset
|
7236 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
eb87ec525b53
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diff
changeset
|
7237 'If-None-Match' : '"aaa-bbb"' |
eb87ec525b53
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diff
changeset
|
7238 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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394
diff
changeset
|
7239 self.assertEqual('400', headers['status']) # Bad header format |
eb87ec525b53
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diff
changeset
|
7240 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7241 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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394
diff
changeset
|
7242 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
391
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390
diff
changeset
|
7243 }) |
227d9a932467
testing revisions in metadata
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diff
changeset
|
7244 self.assertEqual('304', headers['status']) # Not modified |
397
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diff
changeset
|
7245 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
391
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diff
changeset
|
7246 self.assertEqual('', body) # Body must be empty on 304 status |
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390
diff
changeset
|
7247 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7248 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
397
eb87ec525b53
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394
diff
changeset
|
7249 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7250 }) |
227d9a932467
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390
diff
changeset
|
7251 self.assertEqual('200', headers['status']) |
397
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7252 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
eb87ec525b53
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diff
changeset
|
7253 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
eb87ec525b53
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diff
changeset
|
7254 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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394
diff
changeset
|
7255 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
eb87ec525b53
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diff
changeset
|
7256 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
eb87ec525b53
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diff
changeset
|
7257 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
7258 self.assertEqual('200', headers['status']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7259 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
391
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diff
changeset
|
7260 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
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diff
changeset
|
7261 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7262 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
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diff
changeset
|
7263 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
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diff
changeset
|
7264 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7265 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
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diff
changeset
|
7266 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
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390
diff
changeset
|
7267 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7268 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
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diff
changeset
|
7269 self.assertEqual('200', headers['status']) |
397
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diff
changeset
|
7270 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
391
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diff
changeset
|
7271 |
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diff
changeset
|
7272 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
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diff
changeset
|
7273 self.assertEqual('200', headers['status']) |
397
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diff
changeset
|
7274 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
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diff
changeset
|
7275 self.assertEqual('hello', body) |
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diff
changeset
|
7276 |
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diff
changeset
|
7277 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
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diff
changeset
|
7278 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
391
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diff
changeset
|
7279 }) |
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diff
changeset
|
7280 self.assertEqual('304', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7281 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7282 self.assertEqual('', body) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7283 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7284 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7285 'If-None-Match' : '"1-tata"' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7286 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7287 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7288 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7289 self.assertEqual('hello', body) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7290 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7291 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7292 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7293 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7294 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7295 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7296 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7297 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7298 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7299 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7300 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7301 'If-Match' : '0-tata' |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7302 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7303 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7304 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7305 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7306 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7307 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7308 self.assertEqual('200', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7309 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7310 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7311 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7312 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7313 self.assertEqual('404', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7314 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7315 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7316 self.assertEqual('404', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7317 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7318 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7319 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7320 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7321 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7322 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7323 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7324 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7325 self.assertEqual('409', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7326 |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7327 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7328 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7329 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7330 self.assertEqual('304', headers['status']) # Not modified |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7331 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7332 self.assertEqual('', body) # Body must be empty on 304 status |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7333 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7334 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7335 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7336 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7337 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7338 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7339 self.assertEqual('', body) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7340 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7341 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7342 'If-None-Match' : headers['etag'] |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7343 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7344 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7345 if headers['status'] == '200': |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7346 print("Your database backend doesn't store revisions") |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7347 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7348 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7349 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7350 self.assertEqual('409', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7351 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7352 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7353 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7354 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7355 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7356 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7357 self.assertEqual('', body) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7358 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7359 elif headers['status'] == '304': # Revisions are supported |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7360 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7361 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7362 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7363 self.assertEqual('409', headers['status']) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7364 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7365 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7366 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7367 }) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7368 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7369 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7370 self.assertEqual('', body) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7371 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7372 else: |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7373 raise Exception('Internal error') |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7374 |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7375 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7376 |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7377 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7378 def test_revisions_attachments(self): |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7379 # This test fails on Orthanc <= 1.9.1 (support for revisions |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7380 # was introduced in 1.9.2), or if configuration option |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7381 # "CheckRevisions" is "False". Conventions for HTTP headers |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7382 # related to revisions mimic CouchDB: |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7383 # https://docs.couchdb.org/en/stable/api/document/common.html |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7384 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7385 |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7386 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7387 md5 = ComputeMD5(f.read()) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7388 |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7389 # "/compress", "/uncompress" and "/verify-md5" are POST |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7390 # methods, and are not affected by revisions |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7391 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7392 '/data', '/is-compressed', '/md5', '/size' ]: |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7393 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7394 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7395 self.assertEqual('"0-%s"' % md5, headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7396 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7397 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7398 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7399 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7400 self.assertEqual('304', headers['status']) # Not modified |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7401 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7402 self.assertEqual('', body) # Body must be empty on 304 status |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7403 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7404 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7405 'If-None-Match' : '"tata"', # Invalid header |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7406 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7407 self.assertEqual('400', headers['status']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7408 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7409 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7410 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7411 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7412 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7413 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7414 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7415 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7416 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7417 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7418 self.assertEqual('200', headers['status']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7419 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7420 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7421 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7422 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7423 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7424 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7425 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7426 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7427 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7428 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7429 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7430 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7431 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7432 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7433 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7434 self.assertEqual('hello', body) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7435 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7436 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7437 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7438 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7439 self.assertEqual('304', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7440 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7441 self.assertEqual('', body) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7442 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7443 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7444 '"0-tata"']: # Good revision, bad MD5 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7445 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7446 'If-None-Match' : h |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7447 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7448 self.assertEqual('200', headers['status']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7449 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7450 self.assertEqual('hello', body) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7451 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7452 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7453 'If-None-Match' : 'tata' # Bad header format |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7454 }) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7455 self.assertEqual('400', headers['status']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7456 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7457 |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7458 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7459 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7460 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7461 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7462 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7463 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7464 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7465 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7466 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7467 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7468 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7469 'If-Match' : '0-tata' |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7470 }) |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7471 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7472 |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7473 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7474 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7475 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7476 self.assertEqual('200', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7477 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7478 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7479 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7480 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7481 self.assertEqual('404', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7482 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7483 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7484 self.assertEqual('404', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7485 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7486 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7487 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7488 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7489 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7490 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7491 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7492 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7493 self.assertEqual('409', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7494 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7495 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7496 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7497 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7498 self.assertEqual('304', headers['status']) # Not modified |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7499 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7500 self.assertEqual('', body) # Body must be empty on 304 status |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7501 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7502 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7503 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7504 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7505 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7506 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7507 self.assertEqual('{}', body) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7508 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7509 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7510 'If-None-Match' : headers['etag'] |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7511 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7512 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7513 if headers['status'] == '200': |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7514 print("Your database backend doesn't store revisions") |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7515 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7516 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7517 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7518 self.assertEqual('409', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7519 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7520 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7521 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7522 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7523 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7524 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7525 self.assertEqual('{}', body) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7526 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7527 elif headers['status'] == '304': # Revisions are supported |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7528 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7529 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7530 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7531 self.assertEqual('409', headers['status']) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7532 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7533 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7534 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7535 }) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7536 self.assertEqual('200', headers['status']) |
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7537 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7538 self.assertEqual('{}', body) |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7539 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7540 else: |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7541 raise Exception('Internal error') |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7542 |
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7543 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7544 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7545 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7546 def test_issue_195(self): |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7547 # This fails on Orthanc <= 1.9.2 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7548 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7549 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7550 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7551 headers = { 'Accept' : 'application/dicom+json' }) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7552 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7553 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7554 self.assertEqual(5, len(b)) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7555 self.assertEqual(2, len(b["00080018"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7556 self.assertEqual("UI", b["00080018"]["vr"]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7557 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7558 b["00080018"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7559 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7560 self.assertEqual(2, len(b["0020000D"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7561 self.assertEqual("UI", b["0020000D"]["vr"]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7562 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7563 b["0020000D"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7564 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7565 self.assertEqual(2, len(b["0020000E"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7566 self.assertEqual("UI", b["0020000E"]["vr"]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7567 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7568 b["0020000E"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7569 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7570 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7571 self.assertEqual("LO", b["00081030"]["vr"]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7572 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7573 self.assertEqual(2, len(b["0008103E"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7574 self.assertEqual("LO", b["0008103E"]["vr"]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7575 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7576 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7577 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7578 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7579 headers = { 'Accept' : 'application/dicom+json' }) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7580 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7581 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7582 self.assertEqual(5, len(b)) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7583 self.assertEqual(2, len(b["00080018"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7584 self.assertEqual("UI", b["00080018"]["vr"]) |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7585 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7586 b["00080018"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7587 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7588 self.assertEqual(2, len(b["0020000D"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7589 self.assertEqual("UI", b["0020000D"]["vr"]) |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7590 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7591 b["0020000D"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7592 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7593 self.assertEqual(2, len(b["0020000E"])) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7594 self.assertEqual("UI", b["0020000E"]["vr"]) |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7595 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7596 b["0020000E"]["Value"][0]) |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7597 |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7598 self.assertEqual(2, len(b["00084567"])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7599 self.assertEqual("UN", b["00084567"]["vr"]) |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7600 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7601 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7602 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7603 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7604 |
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7605 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7606 self.assertEqual(1, len(b["00084565"])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7607 self.assertEqual("UN", b["00084565"]["vr"]) |
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7608 |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7609 |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7610 def test_modify_attribute(self): |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7611 # This fails on Orthanc <= 1.9.3 (not implemented) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7612 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7613 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7614 |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7615 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7616 self.assertFalse('0020,9165' in tags) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7617 |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7618 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7619 "Replace": { |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7620 "0020,9165": "0020,9056", |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7621 } |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7622 }) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7623 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7624 self.assertEqual(1, len(instances)) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7625 |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7626 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7627 self.assertTrue('0020,9165' in tags) |
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7628 self.assertEqual('0020,9056', tags['0020,9165']) |
405 | 7629 |
7630 | |
7631 def test_issue_146(self): | |
7632 # "Update Anonyization to 2019c" | |
7633 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
7634 | |
7635 def GetTags(study, params): | |
7636 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
7637 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
7638 self.assertEqual(1, len(b)) | |
7639 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
7640 | |
7641 | |
7642 UploadInstance(_REMOTE, 'Issue146.dcm') | |
7643 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
7644 | |
7645 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
7646 | |
7647 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
7648 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
7649 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
7650 tagsDefault = GetTags(study, {}) | |
7651 | |
420 | 7652 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
7653 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
7654 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
7655 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
405 | 7656 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
7657 | |
7658 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
7659 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
7660 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
7661 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
7662 self.assertEqual('YES', t['0012,0062']) | |
7663 | |
7664 for t in [ tags2008 ]: | |
7665 self.assertEqual('20200101', t['0008,0020']) | |
7666 | |
7667 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
7668 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
7669 | |
7670 for t in [ tags2008, tags2017c ]: | |
7671 self.assertEqual('HELLO^C', t['0050,0020']) | |
7672 self.assertEqual('HELLO^D', t['3006,0002']) | |
7673 | |
7674 for t in [ tags2021b, tagsDefault ]: | |
7675 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
7676 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7677 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7678 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7679 def test_anonymize_relationships_6(self): |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7680 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7681 # anonymization issue for the tag 0008,1250. This tags is a |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7682 # sequence containing StudyUID / Series UID of related series. |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7683 # [After anonymization,] this tag keep a reference of the |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7684 # original Study/Series UID. |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7685 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7686 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7687 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7688 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7689 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7690 tags['0008,1250'][0]['0020,000d']) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7691 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7692 tags['0008,1250'][0]['0020,000e']) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7693 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7694 a = DoGet(_REMOTE, '/studies') |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7695 self.assertEqual(1, len(a)) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7696 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7697 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7698 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7699 self.assertEqual(1, len(c)) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7700 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7701 |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7702 # In Orthanc <= 1.9.3, the two tests below failed |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7703 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7704 tags['0008,1250'][0]['0020,000d']) |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7705 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7706 tags['0008,1250'][0]['0020,000e']) |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7707 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7708 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7709 def test_modify_subsequences(self): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7710 # New in Orthanc 1.9.4 (cf. LSD-629) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7711 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7712 studies = DoGet(_REMOTE, '/studies') |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7713 self.assertEqual(1, len(studies)) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7714 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7715 def GetTags(study): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7716 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7717 self.assertEqual(1, len(instances)) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7718 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7719 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7720 tags1 = GetTags(studies[0]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7721 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7722 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7723 'Replace' : { |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7724 'PatientName' : 'Hello1', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7725 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7726 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7727 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7728 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7729 }, |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7730 'Remove' : [ |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7731 'ReferencedPerformedProcedureStepSequence', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7732 'PerformedProtocolCodeSequence[0].CodeValue', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7733 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7734 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7735 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7736 ] |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7737 }) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7738 tags2 = GetTags(a['ID']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7739 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7740 self.assertEqual('Anonymized1', tags1['0010,0010']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7741 self.assertEqual('Hello1', tags2['0010,0010']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7742 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7743 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7744 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7745 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7746 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7747 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7748 for i in range(3): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7749 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7750 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7751 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7752 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7753 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7754 self.assertEqual('Hello4', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7755 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7756 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7757 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7758 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7759 self.assertTrue('0008,1111' in tags1) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7760 self.assertFalse('0008,1111' in tags2) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7761 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7762 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7763 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7764 for i in range(3): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7765 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7766 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7767 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7768 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7769 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7770 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7771 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7772 |
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7773 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7774 tags1['0020,9221'][0]['0020,9164']) |
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7775 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7776 |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7777 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7778 'Replace' : { |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7779 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7780 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7781 }, |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7782 'Remove' : [ |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7783 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7784 ], |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7785 'Keep' : [ |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7786 'ReferencedImageEvidenceSequence', # 0008,9092 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7787 'DimensionIndexSequence', # 0020,9222 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7788 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7789 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7790 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7791 ], |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7792 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7793 }) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7794 tags3 = GetTags(a['ID']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7795 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7796 # UIDs |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7797 for i in [ '0008,0018', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7798 '0010,0020', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7799 '0008,0018', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7800 '0010,0020' ]: |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7801 self.assertNotEqual(tags1[i], tags3[i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7802 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7803 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7804 tags3['0020,9221'][0]['0020,9164']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7805 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7806 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7807 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7808 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7809 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7810 # Removals (X) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7811 for i in [ '0008,0021', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7812 '0008,002a', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7813 '0008,0031', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7814 '0008,1030', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7815 '0008,103e', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7816 '0008,1111', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7817 '0010,21c0', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7818 '0040,0006', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7819 '0040,0241', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7820 '0040,0244', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7821 '0040,0245', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7822 '0040,0250', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7823 '0040,0251', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7824 '0040,0253', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7825 '0040,0254', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7826 '0040,0555', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7827 ]: |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7828 self.assertTrue(i in tags1) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7829 self.assertFalse(i in tags3) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7830 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7831 # Clearings (Z) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7832 for i in [ '0008,0020', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7833 '0008,0023', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7834 '0008,0030', |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7835 '0008,0033' ]: |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7836 self.assertNotEqual('', tags1[i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7837 self.assertEqual('', tags3[i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7838 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7839 # Replace |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7840 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7841 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7842 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7843 |
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7844 # "Keep" on DimensionIndexSequence |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7845 for i in range(3): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7846 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7847 tags3['0020,9222'][i]['0020,9164']) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7848 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7849 # "Keep" on ReferencedImageEvidenceSequence |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7850 self.assertEqual(json.dumps(tags1['0008,9092']), |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7851 json.dumps(tags3['0008,9092'])) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7852 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7853 # "Keep" on PerFrameFunctionalGroupsSequence |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7854 self.assertEqual(json.dumps(tags1['5200,9230']), |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7855 json.dumps(tags3['5200,9230'])) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7856 |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7857 # "Remove" on SharedFunctionalGroupsSequence |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7858 for i in range(3): |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7859 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7860 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
410 | 7861 |
7862 | |
7863 def test_bulk_modify(self): | |
7864 # New in Orthanc 1.9.4 | |
7865 | |
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7866 def GetModified(lst, resourceType, expectedCount = None): |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7867 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
410 | 7868 if expectedCount != None: |
7869 self.assertEqual(expectedCount, len(m)) | |
7870 return m | |
7871 | |
7872 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
7873 series = DoGet(_REMOTE, '/series') [0] | |
7874 study = DoGet(_REMOTE, '/studies') [0] | |
7875 patient = DoGet(_REMOTE, '/patients') [0] | |
7876 | |
7877 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
7878 'Resources' : [ instance ] | |
7879 }) | |
7880 | |
7881 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
7882 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
7883 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
7884 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
7885 | |
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7886 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
410 | 7887 'Resources' : [ instance ] |
7888 }) | |
7889 | |
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7890 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7891 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7892 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7893 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
410 | 7894 |
7895 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
7896 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
7897 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
7898 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7899 |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7900 DoPost(_REMOTE, '/tools/bulk-delete', { |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7901 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7902 }) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7903 |
410 | 7904 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
7905 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
7906 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
7907 | |
7908 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
7909 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
7910 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
7911 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
7912 | |
7913 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
7914 'Resources' : [ knee1, brainix ] | |
7915 }) | |
7916 | |
7917 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
7918 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
7919 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
7920 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
7921 | |
7922 for i in GetModified(a, 'Instance', 2): | |
7923 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
7924 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
7925 | |
7926 b = GetModified(a, 'Series', 2) | |
7927 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
7928 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
7929 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
7930 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
7931 | |
7932 b = GetModified(a, 'Study', 2) | |
7933 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
7934 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
7935 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
7936 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
7937 | |
7938 b = GetModified(a, 'Patient', 2) | |
7939 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
7940 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
7941 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
7942 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
7943 | |
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7944 DoPost(_REMOTE, '/tools/bulk-delete', { |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7945 'Resources' : GetModified(a, 'Instance', 2) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7946 }) |
410 | 7947 |
7948 sourceInstances = DoGet(_REMOTE, '/instances') | |
7949 sourceSeries = DoGet(_REMOTE, '/series') | |
7950 sourceStudies = DoGet(_REMOTE, '/studies') | |
7951 sourcePatients = DoGet(_REMOTE, '/patients') | |
7952 self.assertEqual(4, len(sourceInstances)) | |
7953 self.assertEqual(4, len(sourceSeries)) | |
7954 self.assertEqual(3, len(sourceStudies)) | |
7955 self.assertEqual(3, len(sourcePatients)) | |
7956 | |
7957 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
7958 'Resources' : [ knee1, brainix ] | |
7959 }) | |
7960 | |
7961 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
7962 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
7963 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
7964 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
7965 | |
7966 for i in GetModified(a, 'Instance', 2): | |
7967 self.assertFalse(i in sourceInstances) | |
7968 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
7969 | |
7970 for i in GetModified(a, 'Series', 2): | |
7971 self.assertFalse(i in sourceSeries) | |
7972 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
7973 | |
7974 for i in GetModified(a, 'Study', 2): | |
7975 self.assertFalse(i in sourceStudies) | |
7976 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
7977 | |
7978 for i in GetModified(a, 'Patient', 2): | |
7979 self.assertFalse(i in sourcePatients) | |
7980 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
411
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7981 |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7982 DoPost(_REMOTE, '/tools/bulk-delete', { |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7983 'Resources' : GetModified(a, 'Patient', 2) |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7984 }) |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7985 |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7986 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7987 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7988 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7989 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7990 |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7991 DoPost(_REMOTE, '/tools/bulk-delete', { |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7992 'Resources' : [ instance, |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7993 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7994 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7995 }) |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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410
diff
changeset
|
7996 |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7997 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7998 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7999 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
8cf866641fa7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8000 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
412
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test_dicom_to_json_format
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diff
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|
8001 |
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diff
changeset
|
8002 |
cd9da28451cc
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8003 def test_dicom_to_json_format(self): |
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diff
changeset
|
8004 # Test new output formats for DICOM tags introduced in 1.9.4 |
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diff
changeset
|
8005 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
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diff
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|
8006 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
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changeset
|
8007 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8008 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
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diff
changeset
|
8009 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8010 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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8011 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
8012 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
8013 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8014 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
cd9da28451cc
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8015 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
8016 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8017 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
8018 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
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changeset
|
8019 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8020 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
8021 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
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changeset
|
8022 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8023 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8024 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8025 # Test "ListResources()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8026 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8027 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8028 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8029 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8030 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8031 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8032 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8033 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8034 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8035 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8036 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8037 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8038 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8039 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8040 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8041 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8042 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8043 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8044 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8045 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8046 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8047 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8048 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8049 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8050 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8051 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8052 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8053 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8054 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8055 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8056 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8057 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8058 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8059 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8060 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8061 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8062 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8063 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8064 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8065 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8066 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8067 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8068 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8069 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8070 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8071 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8072 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8073 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8074 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8075 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8076 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8077 # Test "Find()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8078 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8079 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8080 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8081 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8082 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8083 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8084 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8085 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8086 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8087 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8088 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8089 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8090 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8091 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8092 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8093 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8094 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8095 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8096 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8097 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8098 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8099 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8100 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8101 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8102 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8103 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8104 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8105 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8106 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8107 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8108 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8109 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8110 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8111 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8112 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8113 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8114 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8115 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8116 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8117 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8118 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8119 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8120 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8121 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8122 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8123 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8124 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8125 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8126 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8127 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8128 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8129 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8130 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8131 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8132 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8133 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8134 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8135 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8136 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8137 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8138 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8139 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8140 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8141 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8142 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8143 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8144 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8145 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8146 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8147 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8148 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8149 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8150 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8151 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8152 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8153 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8154 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8155 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8156 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8157 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8158 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8159 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8160 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8161 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8162 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8163 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8164 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8165 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8166 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8167 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8168 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8169 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8170 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8171 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8172 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8173 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8174 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8175 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8176 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8177 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8178 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8179 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8180 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8181 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8182 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8183 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8184 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8185 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8186 # Test "GetModule()" in "OrthancRestResources.cpp" |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8187 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8188 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8189 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8190 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8191 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8192 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8193 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8194 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8195 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8196 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8197 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8198 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8199 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8200 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8201 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8202 |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8203 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8204 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8205 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8206 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8207 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8208 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
413 | 8209 |
8210 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
8211 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
8212 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
8213 | |
8214 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
8215 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
8216 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
8217 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
8218 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
8219 | |
8220 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
8221 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
8222 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
8223 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
8224 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
8225 | |
8226 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
8227 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
8228 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
8229 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
8230 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
8231 | |
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8232 # Test "BulkContent()" in "OrthancRestResources.cpp" |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8233 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8234 self.assertEqual(4, len(a)) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8235 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8236 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8237 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8238 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8239 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8240 a[3]['MainDicomTags']['SOPInstanceUID']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8241 |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8242 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8243 'Short': True }) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8244 self.assertEqual(4, len(a)) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8245 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8246 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8247 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8248 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8249 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8250 a[3]['MainDicomTags']['0008,0018']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8251 |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8252 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8253 'Full': True }) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8254 self.assertEqual(4, len(a)) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8255 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8256 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8257 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8258 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8259 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8260 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8261 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8262 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8263 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8264 a[3]['MainDicomTags']['0008,0018']['Value']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8265 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8266 |
415 | 8267 |
8268 def test_bulk_content(self): | |
8269 # New in Orthanc 1.9.4 | |
8270 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
8271 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
8272 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
8273 | |
8274 brainixHierarchy = [ | |
8275 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
8276 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
8277 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
8278 brainix, | |
8279 ] | |
8280 | |
8281 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
8282 self.assertEqual(4, len(a)) | |
8283 b = map(lambda x: x['ID'], a) | |
8284 for i in range(4): | |
8285 self.assertEqual(brainixHierarchy[i], b[i]) | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8286 self.assertTrue('Metadata' in a[i]) |
415 | 8287 |
8288 for (level, index) in [ | |
8289 ('Patient', 0), | |
8290 ('Study', 1), | |
8291 ('Series', 2), | |
8292 ('Instance', 3), | |
8293 ]: | |
8294 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
8295 'Level' : level }) | |
8296 self.assertEqual(1, len(a)) | |
8297 self.assertEqual(level, a[0]['Type']) | |
8298 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8299 self.assertTrue('Metadata' in a[0]) |
415 | 8300 |
8301 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8302 'Level' : level, |
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8303 'Metadata' : False }) |
415 | 8304 self.assertEqual(1, len(a)) |
8305 self.assertEqual(level, a[0]['Type']) | |
8306 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8307 self.assertFalse('Metadata' in a[0]) |
415 | 8308 |
8309 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
8310 self.assertEqual(3, len(a)) | |
8311 for item in a: | |
8312 self.assertEqual('Instance', item['Type']) | |
8313 b = map(lambda x: x['ID'], a) | |
8314 self.assertTrue(knee1 in b) | |
8315 self.assertTrue(knee2 in b) | |
8316 self.assertTrue(brainix in b) | |
8317 | |
8318 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
8319 'Level' : 'Series' }) | |
8320 self.assertEqual(2, len(a)) | |
8321 for item in a: | |
8322 self.assertEqual('Series', item['Type']) | |
8323 b = map(lambda x: x['ID'], a) | |
8324 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
8325 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
8326 | |
8327 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8328 'Level' : 'Study', |
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8329 'Metadata' : False }) |
415 | 8330 self.assertEqual(1, len(a)) |
8331 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
8332 self.assertEqual('Study', a[0]['Type']) | |
8333 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8334 self.assertFalse('Metadata' in a[0]) |
415 | 8335 |
8336 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8337 'Level' : 'Patient', |
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8338 'Metadata' : True }) |
415 | 8339 self.assertEqual(1, len(a)) |
8340 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
8341 self.assertEqual('Patient', a[0]['Type']) | |
8342 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8343 self.assertTrue('Metadata' in a[0]) |
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8344 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8345 self.assertEqual(2, len(a[0]['Metadata'])) |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8346 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8347 else: |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8348 self.assertEqual(1, len(a[0]['Metadata'])) |
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8349 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
415 | 8350 |
8351 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
8352 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
8353 'Level' : level }) | |
8354 self.assertEqual(2, len(a)) | |
8355 for item in a: | |
8356 self.assertEqual(level, item['Type']) | |
8357 b = map(lambda x: x['ID'], a) | |
8358 if level == 'Instance': | |
8359 self.assertTrue(knee1 in b) | |
8360 self.assertTrue(brainix in b) | |
8361 else: | |
8362 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
8363 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8364 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8365 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8366 def test_split_instances(self): |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8367 # New in 1.9.4 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8368 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8369 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8370 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8371 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8372 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8373 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8374 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8375 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8376 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8377 instances = DoGet(_REMOTE, '/instances') |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8378 self.assertEqual(2, len(instances)) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8379 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8380 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8381 for i in [ knee1, knee2 ]: |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8382 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8383 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8384 |
417 | 8385 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
8386 'KeepSource' : False | |
8387 })) # Neither "Instances", nor "Series" | |
8388 | |
8389 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
8390 'KeepSource' : False, | |
8391 'Instances' : [ ], | |
8392 'Series' : [ ] | |
8393 })) # Empty "Instances" and "Series" | |
8394 | |
8395 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
8396 'Instances' : [ 'nope' ], | |
8397 'KeepSource' : False | |
8398 })) | |
8399 | |
8400 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
8401 'Series' : [ 'nope' ], | |
8402 'KeepSource' : False | |
8403 })) | |
8404 | |
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8405 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8406 'Instances' : [ knee1 ], |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8407 'KeepSource' : False |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8408 }) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8409 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8410 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8411 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8412 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8413 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8414 instances = DoGet(_REMOTE, '/instances') |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8415 self.assertEqual(2, len(instances)) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8416 |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8417 self.assertFalse(knee1 in instances) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8418 self.assertTrue(knee2 in instances) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8419 instances.remove(knee2) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8420 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8421 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8422 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8423 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8424 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8425 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8426 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8427 def test_merge_instances(self): |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8428 # New in Orthanc 1.9.4 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8429 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8430 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8431 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8432 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8433 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8434 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8435 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8436 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8437 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8438 instances = DoGet(_REMOTE, '/instances') |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8439 self.assertEqual(2, len(instances)) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8440 self.assertTrue(brainix in instances) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8441 self.assertTrue(knee in instances) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8442 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8443 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8444 'Resources' : [ knee ] |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8445 }) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8446 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8447 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8448 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8449 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8450 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8451 |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8452 instances = DoGet(_REMOTE, '/instances') |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8453 self.assertEqual(2, len(instances)) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8454 self.assertTrue(brainix in instances) |
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8455 self.assertFalse(knee in instances) |
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8456 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8457 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8458 def test_query_retrieve_format(self): |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8459 # New in Orthanc 1.9.5 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8460 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8461 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8462 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8463 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8464 a = DoPost(_REMOTE, '/modalities/self/query', { |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8465 'Level' : 'Study', |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8466 'Query' : {} |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8467 }) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8468 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8469 b = DoGet(_REMOTE, a['Path'] + '/answers') |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8470 self.assertEqual(1, len(b)) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8471 self.assertEqual('0', b[0]) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8472 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8473 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8474 self.assertEqual(1, len(b)) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8475 self.assertEqual(6, len(b[0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8476 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8477 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8478 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8479 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8480 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8481 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8482 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8483 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8484 self.assertEqual('887', b[0]['0010,0020']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8485 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8486 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8487 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8488 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8489 for (key, value) in b[0].items(): |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8490 self.assertEqual('String', value['Type']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8491 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8492 self.assertEqual(json.dumps(b[0]), |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8493 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8494 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8495 # What is below this point didn't work on Orthanc <= 1.9.3 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8496 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8497 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8498 self.assertEqual(1, len(b)) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8499 self.assertEqual(6, len(b[0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8500 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8501 self.assertEqual('A10003245599', b[0]['0008,0050']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8502 self.assertEqual('STUDY', b[0]['0008,0052']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8503 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8504 self.assertEqual('887', b[0]['0010,0020']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8505 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8506 self.assertEqual(json.dumps(b[0]), |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8507 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8508 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8509 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8510 self.assertEqual(1, len(b)) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8511 self.assertEqual(6, len(b[0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8512 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8513 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8514 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8515 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8516 self.assertEqual('887', b[0]['PatientID']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8517 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8518 self.assertEqual(json.dumps(b[0]), |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8519 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8520 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8521 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8522 self.assertEqual('REST API', b['Description']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8523 self.assertEqual('ORTHANC', b['LocalAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8524 self.assertEqual('ORTHANC', b['RemoteAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8525 self.assertEqual(1, len(b['Query'])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8526 self.assertEqual(4, len(b['Query'][0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8527 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8528 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8529 self.assertEqual('887', b['Query'][0]['0010,0020']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8530 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8531 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8532 # What is below this point didn't work on Orthanc <= 1.9.4 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8533 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8534 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8535 self.assertEqual('REST API', b['Description']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8536 self.assertEqual('ORTHANC', b['LocalAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8537 self.assertEqual('ORTHANC', b['RemoteAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8538 self.assertEqual(1, len(b['Query'])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8539 self.assertEqual(4, len(b['Query'][0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8540 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8541 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8542 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8543 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8544 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8545 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8546 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8547 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8548 |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8549 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8550 self.assertEqual('REST API', b['Description']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8551 self.assertEqual('ORTHANC', b['LocalAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8552 self.assertEqual('ORTHANC', b['RemoteAet']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8553 self.assertEqual(1, len(b['Query'])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8554 self.assertEqual(4, len(b['Query'][0])) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8555 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8556 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8557 self.assertEqual('887', b['Query'][0]['PatientID']) |
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8558 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8559 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8560 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8561 def test_anonymize_nested(self): |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8562 # New in Orthanc 1.9.5 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8563 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8564 tags = { |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8565 'MappingResourceIdentificationSequence' : [ |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8566 { |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8567 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8568 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8569 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8570 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8571 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8572 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8573 'StudyDescription' : 'Hello', # Removed |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8574 'StudyDate' : '20210705', # Cleared |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8575 '0009,1001' : '-1234', # Private tag whose VR is DS |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8576 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8577 # Test anonymization of nested sequences |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8578 'ReferencedStudySequence' : [ |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8579 { |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8580 'PatientID' : 'HELLO' |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8581 } |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8582 ], |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8583 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8584 # Non-anonymized tags |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8585 'CodeMeaning' : 'MEANING1', |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8586 'EquivalentCodeSequence' : [ |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8587 { |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8588 'CodeMeaning' : 'MEANING2', |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8589 } |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8590 ], |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8591 } |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8592 ], |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8593 } |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8594 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8595 a = DoPost(_REMOTE, '/tools/create-dicom', |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8596 json.dumps({ |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8597 'Tags' : tags, |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8598 'PrivateCreator' : 'Lunit', |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8599 })) ['ID'] |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8600 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8601 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8602 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8603 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8604 self.assertEqual(1, len(c)) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8605 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8606 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8607 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8608 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8609 # Only "StudyDate" must be present in |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8610 # "MappingResourceIdentificationSequence" after anonymization |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8611 self.assertEqual(1, len(tags1['0008,0124'])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8612 self.assertEqual(1, len(tags2['0008,0124'])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8613 self.assertEqual(9, len(tags1['0008,0124'][0])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8614 self.assertEqual(3, len(tags2['0008,0124'][0])) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8615 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8616 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8617 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8618 |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8619 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8620 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8621 |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8622 |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8623 def test_issue_200(self): |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8624 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8625 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
428 | 8626 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
8627 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
429 | 8628 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8629 |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8630 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8631 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8632 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
428 | 8633 |
8634 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
8635 self.assertEqual(1, len(last)) | |
8636 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
8637 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
429 | 8638 |
8639 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
8640 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
8641 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
8642 | |
8643 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
8644 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
8645 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
8646 | |
8647 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
8648 self.assertEqual(1, len(last)) | |
8649 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
8650 self.assertEqual('self', last[0]['RemoteModality']) | |
8651 self.assertEqual('Instance', last[0]['ResourceType']) | |
8652 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
8653 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
8654 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
8655 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
8656 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
8657 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8658 |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8659 |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8660 def test_upload_dicomdir_archive(self): |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8661 # This test fails on Orthanc <= 1.9.6 |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8662 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8663 |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8664 # Create a ZIP archive with a DICOMDIR |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8665 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8666 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8667 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8668 DoDelete(_REMOTE, '/instances/%s' % instance) |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8669 |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8670 result = DoPost(_REMOTE, '/instances', media) |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8671 self.assertEqual(1, len(result)) |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8672 self.assertEqual(instance, result[0]['ID']) |
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8673 self.assertEqual('Success', result[0]['Status']) |
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8674 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8675 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8676 def test_modify_keep_source(self): |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8677 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8678 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8679 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8680 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8681 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8682 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8683 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8684 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8685 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8686 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8687 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8688 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8689 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8690 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8691 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8692 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8693 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8694 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8695 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8696 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8697 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8698 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8699 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8700 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8701 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8702 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8703 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8704 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8705 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8706 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8707 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8708 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8709 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8710 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8711 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8712 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8713 def GetStudy(a): |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8714 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8715 if len(b) == 1: |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8716 return b[0]['ID'] |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8717 else: |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8718 raise Exception() |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8719 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8720 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8721 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8722 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8723 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8724 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8725 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8726 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8727 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8728 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8729 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8730 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8731 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8732 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8733 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8734 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8735 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8736 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8737 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8738 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8739 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8740 # No more studies, because "bulk-modify" was not given a |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8741 # level, so the modified instance belongs to the same study as |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8742 # the original instance |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8743 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8744 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8745 # The following fails on Orthanc <= 1.9.6 because "Level" was |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8746 # introduced in 1.9.7 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8747 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8748 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8749 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8750 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8751 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8752 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8753 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8754 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8755 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8756 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8757 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8758 |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8759 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8760 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8761 DoDelete(_REMOTE, '/studies/%s' % a) |
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8762 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8763 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8764 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8765 def test_multiframe_windowing(self): |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8766 # Fixed in Orthanc 1.9.7 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8767 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8768 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8769 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8770 self.assertEqual(0x00, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8771 self.assertEqual(0x10, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8772 self.assertEqual(0x20, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8773 self.assertEqual(0x30, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8774 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8775 # Center the window on value "16 == 0x10", thus it has the |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8776 # mid-level value (i.e. 127) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8777 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8778 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8779 self.assertEqual(127, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8780 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8781 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8782 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8783 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8784 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8785 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8786 self.assertEqual(127, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8787 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8788 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8789 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8790 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8791 self.assertEqual(100, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8792 self.assertEqual(116, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8793 self.assertEqual(132, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8794 self.assertEqual(148, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8795 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8796 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8797 self.assertEqual(0, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8798 self.assertEqual(32, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8799 self.assertEqual(64, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8800 self.assertEqual(96, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8801 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8802 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8803 self.assertEqual(100, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8804 self.assertEqual(132, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8805 self.assertEqual(164, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8806 self.assertEqual(196, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8807 |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8808 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8809 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8810 self.assertEqual(127, im.getpixel((1, 0))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8811 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8812 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8813 |
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8814 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8815 def test_dicom_seg(self): |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8816 # This test fails in Orthanc <= 1.9.7 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8817 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8818 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8819 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8820 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8821 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8822 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8823 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8824 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8825 for i in range(96): |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8826 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8827 self.assertEqual('L', im.mode) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8828 self.assertEqual(256, im.size[0]) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8829 self.assertEqual(256, im.size[1]) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8830 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8831 e = im.getextrema() |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8832 self.assertEqual(0, e[0]) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8833 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
8834 if e[1] == 0: |
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
8835 self.assertFalse(i in nonEmptyFrames) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8836 else: |
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
8837 self.assertTrue(i in nonEmptyFrames) |
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
8838 |
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8839 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
9f87d5b2b382
added test_dicom_seg
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diff
changeset
|
8840 |
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8841 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
8842 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
8843 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
8844 |
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8845 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
440 | 8846 |
8847 | |
8848 def test_numpy(self): | |
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8849 # New in Orthanc 1.10.0 |
440 | 8850 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
8851 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
8852 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8853 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
440 | 8854 |
8855 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
8856 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8857 self.assertEqual(numpy.float32, c.dtype) | |
8858 self.assertEqual((288, 288, 1), c.shape) | |
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8859 self.assertAlmostEqual(0, c.min()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8860 self.assertAlmostEqual(536, c.max()) |
440 | 8861 |
8862 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
8863 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8864 self.assertEqual(numpy.uint16, c.dtype) | |
8865 self.assertEqual((288, 288, 1), c.shape) | |
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8866 self.assertEqual(0, c.min()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8867 self.assertEqual(536, c.max()) |
440 | 8868 |
8869 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
8870 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8871 self.assertEqual(numpy.float32, c.dtype) | |
8872 self.assertEqual((1, 288, 288, 1), c.shape) | |
8873 | |
8874 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
8875 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
8876 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8877 self.assertEqual(numpy.float32, c.dtype) | |
8878 self.assertEqual((2, 288, 288, 1), c.shape) | |
8879 | |
8880 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
8881 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
8882 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8883 self.assertEqual(numpy.float32, c.dtype) | |
8884 self.assertEqual((2, 288, 288, 1), c.shape) | |
8885 | |
8886 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
8887 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8888 self.assertEqual(1, len(c.files)) | |
8889 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
8890 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
8891 | |
8892 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
8893 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8894 self.assertEqual(numpy.float32, c.dtype) | |
8895 self.assertEqual((256, 256, 1), c.shape) | |
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8896 self.assertAlmostEqual(0, c.min()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8897 self.assertAlmostEqual(0, c.max()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8898 |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8899 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8900 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8901 self.assertEqual(numpy.float32, c.dtype) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8902 self.assertEqual((256, 256, 1), c.shape) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8903 self.assertAlmostEqual(0, c.min()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8904 self.assertAlmostEqual(255, c.max()) |
440 | 8905 |
8906 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
8907 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8908 self.assertEqual(numpy.float32, c.dtype) | |
8909 self.assertEqual((96, 256, 256, 1), c.shape) | |
8910 | |
8911 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
8912 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
8913 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8914 self.assertEqual(numpy.float32, c.dtype) | |
8915 self.assertEqual((96, 256, 256, 1), c.shape) | |
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8916 |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8917 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8918 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8919 self.assertEqual(numpy.float32, c.dtype) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8920 self.assertEqual((512, 512, 1), c.shape) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8921 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8922 self.assertAlmostEqual(2374, c.max()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8923 |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8924 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8925 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8926 self.assertEqual(numpy.int16, c.dtype) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8927 self.assertEqual((512, 512, 1), c.shape) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8928 self.assertEqual(-2000, c.min()) |
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8929 self.assertEqual(3398, c.max()) |
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8930 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8931 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8932 def test_find_patient_name_with_brackets_and_star(self): |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8933 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8934 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8935 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8936 "Replace" : { |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8937 "PatientName" : "MyName[*]", |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8938 "PatientID": "test_brackets" |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8939 }, |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8940 "Force": True |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8941 }), |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8942 'application/json') |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8943 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8944 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8945 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8946 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8947 'Query' : { 'PatientName' : 'MyName[*]' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8948 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8949 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8950 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8951 'Query' : { 'PatientName' : 'MyName[*]' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8952 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8953 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8954 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8955 'Query' : { 'PatientName' : 'MyName*' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8956 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8957 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8958 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8959 'Query' : { 'PatientName' : 'MyName*' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8960 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8961 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8962 def test_find_patient_name_with_brackets_only(self): |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8963 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8964 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8965 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8966 "Replace" : { |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8967 "PatientName" : "MyName2[]", |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8968 "PatientID": "test_brackets2" |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8969 }, |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8970 "Force": True |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8971 }), |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8972 'application/json') |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8973 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8974 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8975 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8976 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8977 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8978 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8979 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8980 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8981 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8982 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8983 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8984 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8985 'Query' : { 'PatientName' : 'MyName2*' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8986 self.assertEqual(1, len(a)) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8987 |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8988 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8989 'Query' : { 'PatientName' : 'MyName2*' }}) |
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8990 self.assertEqual(1, len(a)) |
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8991 |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8992 |
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8993 def test_rest_find_requested_tags(self): |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8994 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
471 | 8995 |
8996 # Upload instances | |
8997 for i in range(2): | |
8998 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
8999 | |
9000 # Patient level | |
9001 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
9002 'CaseSensitive' : False, | |
9003 'Query' : { 'PatientName' : 'BRAINIX' }, | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9004 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
471 | 9005 'Expand': True |
9006 }) | |
9007 self.assertEqual(1, len(a)) | |
9008 self.assertIn('PatientName', a[0]['RequestedTags']) | |
9009 self.assertIn('PatientID', a[0]['RequestedTags']) | |
9010 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
9011 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
9012 | |
9013 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9014 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
9015 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
9016 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
9017 | |
9018 # Study level, request patient tags too | |
9019 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
9020 'CaseSensitive' : False, | |
9021 'Query' : { 'PatientName' : 'BRAINIX' }, | |
9022 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
9023 'Expand': True | |
9024 }) | |
9025 self.assertEqual(1, len(a)) | |
9026 self.assertIn('PatientName', a[0]['RequestedTags']) | |
9027 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
9028 | |
9029 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9030 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9031 | |
9032 | |
9033 # Series level, request patient and study tags too | |
9034 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
9035 'CaseSensitive' : False, | |
9036 'Query' : { 'PatientName' : 'BRAINIX' }, | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9037 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
471 | 9038 'Expand': True |
9039 }) | |
9040 self.assertEqual(1, len(a)) | |
9041 self.assertIn('PatientName', a[0]['RequestedTags']) | |
9042 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
9043 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9044 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
471 | 9045 |
9046 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9047 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9048 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9049 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
471 | 9050 |
9051 | |
9052 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
9053 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
9054 'CaseSensitive' : False, | |
9055 'Query' : { 'PatientName' : 'BRAINIX' }, | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9056 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
471 | 9057 'Expand': True |
9058 }) | |
9059 self.assertEqual(1, len(a)) | |
9060 self.assertIn('PatientName', a[0]['RequestedTags']) | |
9061 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
9062 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
9063 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9064 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
471 | 9065 |
9066 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9067 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9068 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
9069 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9070 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9071 |
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9072 |
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
9073 def test_rest_find_requested_tags_computed_tags(self): |
471 | 9074 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
9075 # Upload instances | |
9076 for i in range(2): | |
9077 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
9078 | |
9079 | |
9080 # Patient level | |
9081 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
9082 'CaseSensitive' : False, | |
9083 'Query' : { 'PatientName' : 'BRAINIX' }, | |
9084 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
9085 'Expand': True | |
9086 }) | |
9087 self.assertEqual(1, len(a)) | |
9088 | |
9089 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9090 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
9091 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
9092 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
9093 | |
9094 # Study level | |
9095 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
9096 'CaseSensitive' : False, | |
9097 'Query' : { 'PatientName' : 'BRAINIX' }, | |
9098 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
9099 'Expand': True | |
9100 }) | |
9101 self.assertEqual(1, len(a)) | |
9102 | |
9103 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9104 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9105 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
9106 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
9107 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
9108 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
9109 | |
9110 # Series level | |
9111 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
9112 'CaseSensitive' : False, | |
9113 'Query' : { 'PatientName' : 'BRAINIX' }, | |
9114 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
9115 'Expand': True | |
9116 }) | |
9117 self.assertEqual(1, len(a)) | |
9118 | |
9119 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9120 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9121 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
9122 | |
9123 # Instance level | |
9124 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
9125 'CaseSensitive' : False, | |
9126 'Query' : { 'PatientName' : 'BRAINIX' }, | |
9127 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
9128 'Expand': True | |
9129 }) | |
9130 self.assertEqual(2, len(a)) | |
9131 | |
9132 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
9133 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
9134 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
456 | 9135 |
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9136 def test_list_resources_requested_tags(self): |
45dd181b0f17
added test for requestedTags in tools/find + list-resources
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parents:
451
diff
changeset
|
9137 |
471 | 9138 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
9139 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
9140 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
9141 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
9142 | |
9143 # list series and request tags that are not in the default main dicom tags | |
9144 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
9145 | |
9146 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
9147 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
9148 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
9149 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
9150 | |
9151 # list studies and request patient and studies tags | |
9152 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
9153 | |
9154 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
9155 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
9156 | |
9157 | |
9158 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
9159 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
9160 | |
9161 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
9162 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
9163 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
9164 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
9165 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
9166 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
9167 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
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451
diff
changeset
|
9168 |
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9169 |
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9170 def test_list_resources_requested_tags_study_computed_tags(self): |
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9171 |
471 | 9172 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
9173 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
9174 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
9175 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
9176 | |
9177 # list studies and request patient and studies tags, including ModalitiesInStudy | |
9178 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
9179 | |
9180 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
9181 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
9182 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
9183 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
9184 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
9185 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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452
diff
changeset
|
9186 |
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9187 |
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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452
diff
changeset
|
9188 def test_list_resources_requested_tags_series_computed_tags(self): |
46ae8fb09254
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452
diff
changeset
|
9189 |
471 | 9190 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
9191 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
9192 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
9193 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
9194 | |
9195 # list studies and request patient and studies tags, including ModalitiesInStudy | |
9196 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
9197 | |
9198 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
9199 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
9200 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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452
diff
changeset
|
9201 |
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9202 def test_dicomweb_jpeg2k_implicit(self): |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9203 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
457 | 9204 # syntax, in which most DICOM tags have the "UN" value |
455
f53cd250becc
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Sebastien Jodogne <s.jodogne@gmail.com>
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449
diff
changeset
|
9205 # representation. Support introduced in Orthanc 1.10.1. |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9206 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9207 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9208 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9209 headers = { 'Accept' : 'application/dicom+json' }) |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9210 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9211 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
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486
diff
changeset
|
9212 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9213 def test_create_png16RBGA(self): |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9214 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9215 png = f.read() |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
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486
diff
changeset
|
9216 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9217 i = DoPost(_REMOTE, '/tools/create-dicom', |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9218 json.dumps({ |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
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486
diff
changeset
|
9219 'PatientName' : 'Jodogne', |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
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486
diff
changeset
|
9220 'Modality' : 'CT', |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9221 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9222 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9223 })) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9224 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9225 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9226 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9227 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9228 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9229 self.assertEqual((32, 32), png.size) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9230 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9231 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9232 self.assertEqual((32, 32), png.size) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9233 |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9234 j = DoGet(_REMOTE, i['Path']) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9235 self.assertEqual('Instance', j['Type']) |
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9236 self.assertEqual(j['ID'], i['ID']) |
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9237 |
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9238 def test_storescu_custom_host_ip_port(self): |
510 | 9239 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
9240 DropOrthanc(_LOCAL) | |
9241 DropOrthanc(_REMOTE) | |
9242 | |
9243 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
9244 | |
9245 # upload to self -> orthanctest shall not receive any content | |
9246 DoPost(_REMOTE, '/modalities/self/store', { | |
9247 'Resources' : [ a['ID']] | |
9248 }) | |
9249 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
9250 | |
9251 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content | |
9252 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') | |
9253 DoPost(_REMOTE, '/modalities/self/store', { | |
9254 'LocalAet' : 'YOP', | |
9255 'CalledAet' : c['AET'], | |
9256 'Port' : c['Port'], | |
9257 'Host' : c['Host'], | |
9258 'Resources' : [ a['ID']] | |
9259 }) | |
9260 | |
9261 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
9262 | |
9263 DropOrthanc(_REMOTE) | |
9264 DropOrthanc(_LOCAL) | |
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9265 |
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9266 def test_rle_planar_configuration(self): |
531 | 9267 if IsOrthancVersionAbove(_REMOTE, 1, 11, 2): |
9268 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ | |
9269 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
9270 uri = '/instances/%s/preview' % a | |
9271 im = GetImage(_REMOTE, uri) | |
9272 self.assertEqual('RGB', im.mode) | |
9273 self.assertEqual(1475, im.size[0]) | |
9274 self.assertEqual(1475, im.size[1]) | |
9275 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) | |
9276 | |
9277 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): | |
9278 a = UploadInstance(_REMOTE, '2023-04-21-RLEPlanarConfigurationYBR_FULL.dcm') ['ID'] | |
9279 uri = '/instances/%s/preview' % a | |
9280 im = GetImage(_REMOTE, uri) | |
9281 pprint.pprint(im) | |
9282 self.assertEqual('RGB', im.mode) | |
9283 self.assertEqual(1260, im.size[0]) | |
9284 self.assertEqual(910, im.size[1]) | |
9285 self.assertEqual('07a3ea7ea08d54362f744cc5945e8743', ComputeMD5(DoGet(_REMOTE, uri))) | |
9286 | |
512 | 9287 |
9288 def test_rest_api_write_to_file_system(self): | |
9289 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
9290 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
9291 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances/%s/export' % a, '/tmp/test.dcm')) | |
513 | 9292 |
515
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9293 def test_overwrite_generates_stable_study(self): |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9294 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9295 # This test makes sure there are no regression wrt StableStudy when uploading instances in Orthanc |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9296 # The current behaviour (tested from 1.5.7 to 1.12.0) is |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9297 # If you upload 2 instances with a delay > StableAge, you get 2 StableStudy events and they are both listed in /changes |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9298 # If you upload twice the same instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9299 # If you upload an instance and a modified version of this instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9300 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9301 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9302 def GetAllStableStudyChangesIds(studyId, timeout): |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9303 # try to be as fast as possible -> stop as soon as we've found a StableStudy event that appeared after we started monitoring |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9304 fromSeq = DoGet(_REMOTE, '/changes')["Last"] |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9305 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9306 endTime = time.time() + timeout |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9307 newStableStudyFound = False |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9308 while not newStableStudyFound and time.time() < endTime: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9309 time.sleep(0.1) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9310 changes = DoGet(_REMOTE, '/changes') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9311 stableStudyChangesIds = [] |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9312 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9313 for change in changes["Changes"]: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9314 if change["ChangeType"] == "StableStudy" and studyId == change["ID"]: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9315 stableStudyChangesIds.append(change["Seq"]) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9316 if change["Seq"] > fromSeq: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9317 newStableStudyFound = True |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9318 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9319 return stableStudyChangesIds |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9320 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9321 if True: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9322 DropOrthanc(_REMOTE) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9323 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9324 # StableAge is set to 1, expect a StableStudy within 4 seconds |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9325 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9326 self.assertEqual(1, len(changes1)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9327 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9328 # upload the same instance again and check a new change has been generated with a new id, the first change has been deleted |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9329 upload1b = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9330 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9331 self.assertEqual(1, len(changes1b)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9332 self.assertNotEqual(changes1[0], changes1b[0]) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9333 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9334 if True: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9335 DropOrthanc(_REMOTE) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9336 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9337 # StableAge is set to 1, expect a StableStudy within 4 seconds |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9338 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9339 self.assertEqual(1, len(changes1)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9340 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9341 # reupload a modified instance in the same study and check a new change has been generated with a new id, the first change has been deleted |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9342 modified = DoPost(_REMOTE, '/instances/%s/modify' % upload1["ID"], |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9343 json.dumps({ |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9344 "Replace" : { |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9345 "InstitutionName" : "hello", |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9346 "SOPInstanceUID": "1.2.840.113619.2.176.2025.1499492.7040.1171286241.705" |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9347 }, |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9348 "Force": True |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9349 }), |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9350 'application/json') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9351 upload1b = DoPost(_REMOTE, '/instances', modified, 'application/dicom') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9352 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9353 self.assertEqual(upload1["ParentStudy"], upload1b["ParentStudy"]) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9354 self.assertEqual(1, len(changes1b)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9355 self.assertNotEqual(changes1[0], changes1b[0]) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9356 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9357 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9358 if True: |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9359 DropOrthanc(_REMOTE) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9360 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9361 # StableAge is set to 1, expect a StableStudy within 4 seconds |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9362 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9363 self.assertEqual(1, len(changes1)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9364 |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9365 # upload a new instance in the same study and check a second StableStudy change has been generated with a new id |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9366 upload2 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9367 changes2 = GetAllStableStudyChangesIds(upload2["ParentStudy"], 4) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9368 self.assertEqual(upload1["ParentStudy"], upload2["ParentStudy"]) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9369 self.assertEqual(2, len(changes2)) |
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9370 self.assertEqual(changes1[0], changes2[0]) |
516 | 9371 |
513 | 9372 def test_labels(self): |
523 | 9373 def CheckAllLabels(expected): |
9374 actual = DoGet(_REMOTE, '/tools/labels') | |
9375 self.assertEqual(len(actual), len(expected)) | |
9376 for i in expected: | |
9377 self.assertTrue(i in actual) | |
9378 for i in actual: | |
9379 self.assertTrue(i in expected) | |
9380 | |
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9381 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9382 DoGet(_REMOTE, '/system') ['HasLabels']): |
513 | 9383 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
9384 patient = DoGet(_REMOTE, '/instances/%s/patient' % u) ['ID'] | |
9385 study = DoGet(_REMOTE, '/instances/%s/study' % u) ['ID'] | |
9386 series = DoGet(_REMOTE, '/instances/%s/series' % u) ['ID'] | |
9387 | |
9388 for base in [ '/instances/%s' % u, | |
9389 '/series/%s' % series, | |
9390 '/studies/%s' % study, | |
519
b1991073e4d1
test alphanumeric labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
518
diff
changeset
|
9391 '/patients/%s' % patient ]: |
521 | 9392 |
9393 # no tags by default | |
513 | 9394 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
523 | 9395 CheckAllLabels([]) |
521 | 9396 |
9397 # 404 if requesting a tag that does apply for a resource | |
513 | 9398 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) |
521 | 9399 |
9400 # delete a non existing tag does not generate an error | |
513 | 9401 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
9402 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) | |
521 | 9403 |
9404 # Not an alphanumeric label -> 400 | |
9405 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '%s/labels/@' % base)) | |
9406 | |
9407 # add a tag | |
513 | 9408 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) |
521 | 9409 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
9410 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
523 | 9411 CheckAllLabels([ 'hello' ]) |
521 | 9412 |
9413 # double tagging does not generate any error | |
9414 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) | |
9415 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) | |
9416 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) | |
9417 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
9418 | |
9419 # add a second tag | |
9420 self.assertEqual('', DoPut(_REMOTE, '%s/labels/world' % base)) | |
9421 self.assertEqual('', DoGet(_REMOTE, '%s/labels/world' % base)) | |
513 | 9422 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) |
521 | 9423 self.assertEqual(2, len(DoGet(_REMOTE, base) ['Labels'])) |
9424 self.assertIn(DoGet(_REMOTE, base) ['Labels'][0], ['hello', 'world']) | |
9425 self.assertIn(DoGet(_REMOTE, base) ['Labels'][1], ['hello', 'world']) | |
523 | 9426 CheckAllLabels([ 'hello', 'world' ]) |
521 | 9427 |
9428 # delete the first tag | |
513 | 9429 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
521 | 9430 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
9431 self.assertEqual('world', DoGet(_REMOTE, base) ['Labels'][0]) | |
9432 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) | |
523 | 9433 CheckAllLabels([ 'world' ]) |
521 | 9434 |
9435 # delete the second tag | |
9436 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/world' % base)) | |
513 | 9437 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
521 | 9438 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/world' % base)) |
523 | 9439 CheckAllLabels([ ]) |
521 | 9440 |
9441 # test all valid chars | |
523 | 9442 VALID = r'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789_-' |
9443 self.assertEqual('', DoPut(_REMOTE, '%s/labels/%s' % (base, VALID))) | |
9444 CheckAllLabels([ VALID ]) | |
9445 DoDelete(_REMOTE, '%s/labels/%s' % (base, VALID)) | |
9446 CheckAllLabels([ ]) | |
9447 | |
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9448 else: |
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9449 print("Your database backend doesn't support labels") |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9450 |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9451 def test_find_labels(self): |
525 | 9452 def Execute(labels, constraint, query = { }): |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9453 return DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
525 | 9454 'Query' : query, |
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9455 'Labels' : labels, |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9456 'LabelsConstraint' : constraint, }) |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9457 |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9458 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9459 DoGet(_REMOTE, '/system') ['HasLabels']): |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9460 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9461 |
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9462 # The instance has no label |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9463 self.assertEqual(1, len(Execute([], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9464 self.assertEqual(1, len(Execute([], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9465 self.assertEqual(1, len(Execute([], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9466 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9467 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9468 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9469 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9470 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9471 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9472 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9473 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9474 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9475 |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9476 DoPut(_REMOTE, '/instances/%s/labels/a' % u) |
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9477 # The instance has label "a" |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9478 self.assertEqual(1, len(Execute([], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9479 self.assertEqual(1, len(Execute([], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9480 self.assertEqual(1, len(Execute([], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9481 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9482 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9483 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9484 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9485 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9486 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9487 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9488 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9489 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9490 |
525 | 9491 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'PatientID' : 'nope' }))) |
9492 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : '' }))) | |
9493 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
9494 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '' }))) | |
9495 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
9496 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
9497 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
9498 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '' }))) | |
9499 | |
9500 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
9501 return | |
9502 | |
9503 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
9504 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
9505 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
9506 self.assertEqual(1, len(Execute([ 'a' ], 'All', { | |
9507 'PatientID' : 'ozp00SjY2xG', | |
9508 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
9509 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
9510 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
9511 }))) | |
9512 | |
9513 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'nope' }))) | |
9514 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : '' }))) | |
9515 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
9516 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '' }))) | |
9517 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
9518 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
9519 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
9520 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '' }))) | |
9521 | |
9522 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
9523 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
9524 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
9525 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
9526 self.assertEqual(0, len(Execute([ 'b' ], 'All', { | |
9527 'PatientID' : 'ozp00SjY2xG', | |
9528 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
9529 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
9530 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
9531 }))) | |
9532 | |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9533 DoPut(_REMOTE, '/instances/%s/labels/b' % u) |
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9534 # The instance has labels "a" and "b" |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9535 self.assertEqual(1, len(Execute([], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9536 self.assertEqual(1, len(Execute([], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9537 self.assertEqual(1, len(Execute([], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9538 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9539 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9540 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9541 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9542 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9543 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9544 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9545 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9546 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
524 | 9547 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'All'))) |
9548 self.assertEqual(1, len(Execute([ 'b', 'c' ], 'Any'))) | |
9549 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'None'))) | |
9550 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'All'))) | |
9551 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'Any'))) | |
9552 self.assertEqual(1, len(Execute([ 'c', 'c' ], 'None'))) | |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9553 |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9554 DoDelete(_REMOTE, '/instances/%s/labels/a' % u) |
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9555 # The instance has label "b" |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9556 self.assertEqual(1, len(Execute([], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9557 self.assertEqual(1, len(Execute([], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9558 self.assertEqual(1, len(Execute([], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9559 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9560 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9561 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9562 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9563 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9564 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9565 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9566 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9567 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9568 |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9569 DoDelete(_REMOTE, '/instances/%s/labels/b' % u) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9570 # The instance has no more label |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9571 self.assertEqual(1, len(Execute([], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9572 self.assertEqual(1, len(Execute([], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9573 self.assertEqual(1, len(Execute([], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9574 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9575 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9576 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9577 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9578 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9579 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9580 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9581 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9582 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9583 |
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9584 else: |
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9585 print("Your database backend doesn't support labels") |
527
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9586 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9587 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9588 def test_numeric_metadata(self): |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9589 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9590 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9591 study = DoGet(_REMOTE, '/instances/%s/study' % instance)['ID'] |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9592 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9593 m = DoGet(_REMOTE, '/studies/%s/metadata' % study) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9594 self.assertEqual(2, len(m)) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9595 self.assertTrue('LastUpdate' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9596 self.assertTrue('MainDicomTagsSignature' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9597 lastUpdate = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'LastUpdate')) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9598 signature = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'MainDicomTagsSignature')) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9599 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9600 m = DoGet(_REMOTE, '/studies/%s/metadata?numeric' % study) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9601 self.assertEqual(2, len(m)) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9602 self.assertTrue(7 in m) # MetadataType_LastUpdate |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9603 self.assertTrue(15 in m) # MetadataType_MainDicomTagsSignature |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9604 self.assertEqual(lastUpdate, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 7))) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9605 self.assertEqual(signature, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 15))) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9606 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9607 m = DoGet(_REMOTE, '/studies/%s/metadata?expand' % study) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9608 self.assertEqual(2, len(m)) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9609 self.assertTrue('LastUpdate' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9610 self.assertTrue('MainDicomTagsSignature' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9611 self.assertEqual(lastUpdate, m['LastUpdate']) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9612 self.assertEqual(signature, m['MainDicomTagsSignature']) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9613 |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9614 m = DoGet(_REMOTE, '/studies/%s/metadata?expand&numeric' % study) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9615 self.assertEqual(2, len(m)) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9616 self.assertTrue('7' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9617 self.assertTrue('15' in m) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9618 self.assertEqual(lastUpdate, m['7']) |
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
9619 self.assertEqual(signature, m['15']) |
535
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
9620 |
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
9621 def test_add_attachment_to_non_existing_resource(self): |
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
9622 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): # till 1.12.0, it returned a 200 |
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
9623 (headers, body) = DoPutRaw(_REMOTE, '/instances/11111111-11111111-11111111-11111111-11111111/attachments/1025', 'hello') |
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
9624 self.assertEqual('404', headers['status']) |
538
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9625 |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9626 def test_delete_updates_parents_last_update_metadata(self): |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9627 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9628 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm') |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9629 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm') |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9630 |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9631 #instanceLastUpdate1 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9632 seriesLastUpdate1 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9633 studyLastUpdate1 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9634 patientLastUpdate1 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9635 |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9636 time.sleep(1.01) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9637 DoDelete(_REMOTE, '/instances/%s' % j['ID']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9638 |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9639 #instanceLastUpdate2 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9640 seriesLastUpdate2 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9641 studyLastUpdate2 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9642 patientLastUpdate2 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9643 |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9644 #self.assertEqual(instanceLastUpdate1, instanceLastUpdate2) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9645 self.assertNotEqual(seriesLastUpdate1, seriesLastUpdate2) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9646 self.assertNotEqual(studyLastUpdate1, studyLastUpdate2) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9647 self.assertNotEqual(patientLastUpdate1, patientLastUpdate2) |
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
9648 |