Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 468:e1867aeb57e2
retries storescu if it succeeds while it should fail
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Wed, 20 Apr 2022 14:53:22 +0200 |
| parents | 038fb852e2be |
| children | c19d33c5defe |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2022 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
| 34 | |
| 11 | 35 from PIL import ImageChops |
| 3 | 36 from Toolbox import * |
| 13 | 37 from xml.dom import minidom |
| 312 | 38 from datetime import datetime |
| 3 | 39 |
| 40 _LOCAL = None | |
| 41 _REMOTE = None | |
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42 _DOCKER = False |
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43 |
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44 |
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45 def SetOrthancParameters(local, remote, withinDocker): |
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46 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 47 _LOCAL = local |
| 48 _REMOTE = remote | |
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49 _DOCKER = withinDocker |
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50 |
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51 |
| 14 | 52 def ExtractDicomTags(rawDicom, tags): |
| 53 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 54 f.write(rawDicom) | |
| 55 f.flush() | |
| 45 | 56 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 57 |
| 58 result = [] | |
| 59 for tag in tags: | |
| 60 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 61 if match == None: | |
| 62 result.append('') | |
| 63 else: | |
| 64 result.append(match.group(1)) | |
| 65 | |
| 66 return result | |
| 67 | |
| 68 | |
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69 def CompareLists(a, b): |
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70 if len(a) != len(b): |
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71 return False |
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72 |
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73 for i in range(len(a)): |
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74 d = a[i] - b[i] |
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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76 return False |
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77 |
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78 return True |
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79 |
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80 |
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81 def CompareTags(a, b, tagsToIgnore): |
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82 for i in tagsToIgnore: |
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83 if i in a: |
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84 del a[i] |
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85 if i in b: |
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86 del b[i] |
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87 |
| 123 | 88 if a.keys() == b.keys(): |
| 89 return True | |
| 90 else: | |
| 91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 92 return False | |
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93 |
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94 |
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95 def CallFindScu(args): |
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96 p = subprocess.Popen([ FindExecutable('findscu'), |
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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99 stderr=subprocess.PIPE) |
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100 return p.communicate()[1] |
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101 |
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102 |
| 142 | 103 def GetMoveScuCommand(): |
| 104 return [ | |
| 105 FindExecutable('movescu'), | |
| 106 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 107 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 108 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 109 _REMOTE['Server'], | |
| 110 str(_REMOTE['DicomPort']) | |
| 111 ] | |
| 112 | |
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113 |
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114 def IsDicomUntilPixelDataStored(orthanc): |
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115 # This function detects whether the "StorageCompression" option is |
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116 # "true", OR the storage area does not support read-range |
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117 |
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118 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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119 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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120 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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121 if a != 0x03a0: |
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122 raise Exception('Internal error') |
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123 |
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124 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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125 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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126 raise Exception('Internal error') |
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127 |
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128 DoDelete(orthanc, '/instances/%s' % i) |
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129 |
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130 if len(a) == 1: |
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131 return False |
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132 elif 'dicom-until-pixel-data' in a: |
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133 return True |
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134 else: |
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135 raise Exception('Internal error') |
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136 |
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137 else: |
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138 return False |
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139 |
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140 |
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141 def CallMoveScu(args): |
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142 try: |
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143 subprocess.check_call(GetMoveScuCommand() + args, |
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144 stderr = subprocess.PIPE) |
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145 except subprocess.CalledProcessError as e: |
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146 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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147 # that has been introduced in DCMTK 3.6.2. This error code is |
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148 # expected by some tests that try and C-MOVE non-existing |
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149 # DICOM instances. |
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150 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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151 if e.returncode != 69: |
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152 raise e |
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153 |
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154 |
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155 def GenerateTestSequence(): |
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156 return [ |
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157 { |
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158 'StudyDescription': 'Hello^', |
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159 'ReferencedStudySequence' : [ |
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160 { |
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161 'StudyDescription': 'Toto', |
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162 }, |
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163 { |
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164 'StudyDescription': 'Tata', |
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165 }, |
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166 ] |
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167 }, |
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168 { |
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169 'StudyDescription': 'Sébastien^', |
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170 'StudyDate' : '19700202', |
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171 } |
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172 ] |
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173 |
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174 |
| 3 | 175 class Orthanc(unittest.TestCase): |
| 176 def setUp(self): | |
| 83 | 177 if (sys.version_info >= (3, 0)): |
| 178 # Remove annoying warnings about unclosed socket in Python 3 | |
| 179 import warnings | |
| 180 warnings.simplefilter("ignore", ResourceWarning) | |
| 181 | |
| 3 | 182 DropOrthanc(_LOCAL) |
| 183 DropOrthanc(_REMOTE) | |
| 174 | 184 UninstallLuaCallbacks(_REMOTE) |
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185 |
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186 # Reset stuff possibly set by some integration tests |
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187 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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188 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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189 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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190 |
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191 for i in [ 'toto', 'tata' ]: |
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192 if i in DoGet(_REMOTE, '/modalities'): |
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193 DoDelete(_REMOTE, '/modalities/%s' % i) |
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194 if i in DoGet(_REMOTE, '/peers'): |
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195 DoDelete(_REMOTE, '/peers/%s' % i) |
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196 |
| 312 | 197 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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198 |
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199 def AssertSameImages(self, truth, url): |
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200 im = GetImage(_REMOTE, url) |
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201 self.assertTrue(CompareLists(truth, im.getdata())) |
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202 |
| 3 | 203 |
| 204 def test_system(self): | |
| 177 | 205 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 206 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 207 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 208 | |
| 209 systemInfo = DoGet(_REMOTE, '/system') | |
| 210 if systemInfo["Version"] == "mainline": | |
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211 print("Skipping version checks since you're currently in mainline") |
| 177 | 212 return |
| 213 | |
| 173 | 214 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
| 215 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
| 216 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
| 217 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
| 218 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
| 3 | 219 |
| 220 def test_upload(self): | |
| 173 | 221 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 222 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 223 | |
| 224 sizeDummyCT = 2472 | |
| 225 sizeOverwrite = 2476 | |
| 226 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 227 | |
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228 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 229 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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230 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 231 self.assertEqual(instance, u['ID']) |
| 3 | 232 self.assertEqual('Success', u['Status']) |
| 173 | 233 |
| 183 | 234 if True: |
| 235 # New test for Orthanc 1.4.3 | |
| 236 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 237 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 238 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 239 | |
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240 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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241 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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242 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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243 j = 0 |
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244 else: |
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245 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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246 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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247 |
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248 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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249 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 250 |
| 251 if isCompressed: | |
| 252 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 253 else: | |
| 254 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 255 | |
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256 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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257 self.assertIn('Uuid', attachmentInfo) |
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258 self.assertEqual(1, attachmentInfo['ContentType']) |
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259 |
| 173 | 260 s = sizeDummyCT + j |
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261 |
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262 if isCompressed: |
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263 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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264 else: |
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265 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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266 |
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267 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 268 |
| 3 | 269 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 270 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 271 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 272 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 273 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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274 |
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275 if isCompressed: |
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276 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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277 else: |
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278 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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279 |
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280 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 281 |
| 282 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 283 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 284 self.assertEqual('KNIX', i['PatientName']) |
| 285 | |
| 286 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 287 # Overwriting | |
| 288 self.assertEqual('Success', u['Status']) | |
| 289 else: | |
| 290 self.assertEqual('AlreadyStored', u['Status']) | |
| 291 | |
| 292 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 293 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 294 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 295 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 296 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 297 | |
| 298 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 299 # Overwriting | |
| 300 self.assertEqual('Success', u['Status']) | |
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301 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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302 j2 = 0 |
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303 else: |
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304 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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305 self.assertNotEqual(j, j2) |
| 173 | 306 s2 = sizeOverwrite + j2 |
| 307 self.assertNotEqual(s, s2) | |
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308 if isCompressed: |
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309 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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310 else: |
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311 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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312 |
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313 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 314 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 315 self.assertEqual('ANOTHER', i['PatientName']) | |
| 316 else: | |
| 317 self.assertEqual('AlreadyStored', u['Status']) | |
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318 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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319 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 320 |
| 5 | 321 def test_upload_2(self): |
| 3 | 322 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 323 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 324 self.assertEqual(i, instance['ID']) | |
| 325 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 326 instance['MainDicomTags']['SOPInstanceUID']) | |
| 327 | |
| 328 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 329 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 330 series['MainDicomTags']['SeriesInstanceUID']) | |
| 331 | |
| 332 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 333 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 334 study['MainDicomTags']['StudyInstanceUID']) | |
| 335 | |
| 336 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 337 self.assertEqual('ozp00SjY2xG', | |
| 338 patient['MainDicomTags']['PatientID']) | |
| 339 | |
| 340 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 341 self.assertEqual(2472, len(dicom)) | |
| 342 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 343 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 344 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 345 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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346 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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347 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 348 |
| 349 | |
| 5 | 350 def test_images(self): |
| 351 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 352 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 353 |
| 5 | 354 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 355 self.assertEqual("L", im.mode) | |
| 356 self.assertEqual(512, im.size[0]) | |
| 357 self.assertEqual(358, im.size[1]) | |
| 358 | |
| 359 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 360 self.assertEqual("L", im.mode) | |
| 361 self.assertEqual(512, im.size[0]) | |
| 362 self.assertEqual(358, im.size[1]) | |
| 363 | |
| 364 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 365 self.assertEqual(512, im.size[0]) | |
| 366 self.assertEqual(358, im.size[1]) | |
| 367 | |
| 368 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 369 self.assertEqual("L", im.mode) | |
| 370 self.assertEqual(512, im.size[0]) | |
| 371 self.assertEqual(358, im.size[1]) | |
| 372 | |
| 373 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 374 self.assertEqual("L", im.mode) | |
| 375 self.assertEqual(512, im.size[0]) | |
| 376 self.assertEqual(358, im.size[1]) | |
| 377 | |
| 378 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 379 self.assertEqual(512, im.size[0]) | |
| 380 self.assertEqual(358, im.size[1]) | |
| 64 | 381 |
| 382 # This is Little Endian Explicit | |
| 383 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 384 | |
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385 def test_images_implicit_vr(self): |
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386 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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387 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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388 |
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389 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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390 self.assertEqual("RGB", im.mode) |
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391 self.assertEqual(800, im.size[0]) |
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392 self.assertEqual(600, im.size[1]) |
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393 |
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394 |
| 6 | 395 def test_hierarchy(self): |
| 396 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 397 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 398 UploadFolder(_REMOTE, 'Knee/T1') | |
| 399 UploadFolder(_REMOTE, 'Knee/T2') | |
| 400 | |
| 401 p = DoGet(_REMOTE, '/patients') | |
| 402 s = DoGet(_REMOTE, '/studies') | |
| 403 t = DoGet(_REMOTE, '/series') | |
| 404 self.assertEqual(2, len(p)) | |
| 405 self.assertEqual(2, len(s)) | |
| 406 self.assertEqual(4, len(t)) | |
| 407 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 408 | |
| 409 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 410 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 411 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 412 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 413 | |
| 414 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 415 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 416 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 417 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 418 | |
| 419 self.assertTrue(brainixPatient in p) | |
| 420 self.assertTrue(kneePatient in p) | |
| 421 self.assertTrue(brainixStudy in s) | |
| 422 self.assertTrue(kneeStudy in s) | |
| 423 self.assertTrue(brainixEpi in t) | |
| 424 self.assertTrue(brainixFlair in t) | |
| 425 self.assertTrue(kneeT1 in t) | |
| 426 self.assertTrue(kneeT2 in t) | |
| 427 | |
| 428 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 429 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 430 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 431 | |
| 432 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 433 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 434 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 435 | |
| 436 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 437 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 438 | |
| 439 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 440 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 441 | |
| 442 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 443 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 444 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 445 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 446 | |
| 447 for patient in p: | |
| 448 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 449 self.assertEqual(patient, study['ParentPatient']) | |
| 450 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 451 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 452 self.assertEqual('Unknown', series['Status']) |
| 6 | 453 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 454 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 455 | |
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456 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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457 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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458 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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459 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 460 |
| 461 | |
| 462 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 463 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 464 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 465 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 466 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 467 self.assertEqual(None, r) | |
| 468 | |
| 469 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 470 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 471 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 472 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 473 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 474 self.assertEqual('Study', r['Type']) | |
| 475 self.assertEqual(kneeStudy, r['ID']) | |
| 476 | |
| 477 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 478 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 479 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 480 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 481 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 482 self.assertEqual('Series', r['Type']) | |
| 483 self.assertEqual(kneeT1, r['ID']) | |
| 484 | |
| 485 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 486 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 487 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 488 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 489 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 490 self.assertEqual(None, r) | |
| 491 | |
| 492 DropOrthanc(_REMOTE) | |
| 493 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 494 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 495 |
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496 def test_delete_cascade(self): |
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497 # make sure deleting the last instance of a study deletes the series, study and patient |
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498 |
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499 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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500 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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501 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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502 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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503 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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504 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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505 |
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506 DoDelete(_REMOTE, '/instances/%s' % a) |
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507 |
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508 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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509 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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510 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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511 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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512 |
| 7 | 513 |
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514 def test_multiframe(self): |
| 7 | 515 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 516 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 517 | |
| 518 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 519 self.assertEqual("L", im.mode) | |
| 520 self.assertEqual(512, im.size[0]) | |
| 521 self.assertEqual(512, im.size[1]) | |
| 522 | |
| 523 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 524 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 525 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 526 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 527 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 528 | |
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529 |
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530 def test_changes(self): |
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531 # Check emptiness |
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532 c = DoGet(_REMOTE, '/changes') |
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533 self.assertEqual(0, len(c['Changes'])) |
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534 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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535 self.assertTrue(c['Done']) |
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536 c = DoGet(_REMOTE, '/changes?last') |
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537 self.assertEqual(0, len(c['Changes'])) |
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538 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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539 self.assertTrue(c['Done']) |
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540 |
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541 # Add 1 instance |
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542 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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543 c = DoGet(_REMOTE, '/changes') |
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544 begin = c['Last'] |
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545 self.assertEqual(4, len(c['Changes'])) |
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546 self.assertTrue(c['Done']) |
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547 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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548 |
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549 # Check the order in which the creation events are reported |
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550 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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551 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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552 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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553 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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554 |
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555 c = DoGet(_REMOTE, '/changes?last') |
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556 self.assertEqual(1, len(c['Changes'])) |
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557 self.assertEqual(begin, c['Last']) |
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558 self.assertTrue(c['Done']) |
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559 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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560 self.assertEqual(1, len(c['Changes'])) |
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561 self.assertEqual(begin, c['Last']) |
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562 self.assertTrue(c['Done']) |
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563 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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564 self.assertEqual(1, len(c['Changes'])) |
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|
565 self.assertEqual(begin - 1, c['Last']) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
566 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
567 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
568 self.assertEqual(1, len(c['Changes'])) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
569 self.assertEqual(begin - 2, c['Last']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
570 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
571 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
572 UploadFolder(_REMOTE, 'Knee/T1') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
573 UploadFolder(_REMOTE, 'Knee/T2') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
574 since = begin |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
575 countPatients = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
576 countStudies = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
577 countSeries = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
578 countInstances = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
579 completed = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
580 while True: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
581 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
582 since = c['Last'] |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
583 for i in c['Changes']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
584 if i['ResourceType'] == 'Instance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
585 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
586 if i['ResourceType'] == 'Patient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
587 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
588 if i['ResourceType'] == 'Study': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
589 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
590 if i['ResourceType'] == 'Series': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
591 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
592 if i['ChangeType'] == 'NewInstance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
593 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
594 if i['ChangeType'] == 'NewPatient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
595 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
596 if i['ChangeType'] == 'NewStudy': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
597 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
598 if i['ChangeType'] == 'NewSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
599 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
600 if i['ChangeType'] == 'CompletedSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
601 completed += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
602 self.assertTrue('ID' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
603 self.assertTrue('Path' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
604 self.assertTrue('Seq' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
605 if c['Done']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
606 break |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
607 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
608 self.assertEqual(2 * 50, countInstances) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
609 self.assertEqual(2 * 1, countPatients) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
610 self.assertEqual(2 * 1, countStudies) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
611 self.assertEqual(2 * 2, countSeries) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
612 self.assertEqual(0, completed) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
613 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
614 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
615 def test_archive(self): |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
616 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
617 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 618 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 619 | |
| 620 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
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parents:
7
diff
changeset
|
621 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
622 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
623 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
624 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
625 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
626 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
627 self.assertEqual(1, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
628 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
629 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 630 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 631 | |
| 632 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
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parents:
7
diff
changeset
|
633 self.assertEqual(2, len(z.namelist())) |
| 192 | 634 |
| 635 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 636 'Resources' : [ brainix, knee ] | |
| 637 }) | |
| 638 self.assertEqual(3, len(z.namelist())) | |
|
403
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
639 |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
640 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
641 'Synchronous' : True |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
642 }) |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
643 self.assertEqual(2, len(z.namelist())) |
| 192 | 644 |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
645 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
646 def test_media_archive(self): |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
647 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
648 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
649 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
650 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
651 self.assertEqual(3, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
652 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
653 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
654 self.assertTrue('DICOMDIR' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
655 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
656 try: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
657 os.remove('/tmp/DICOMDIR') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
658 except: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
659 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
660 pass |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
661 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
662 z.extract('DICOMDIR', '/tmp') |
| 45 | 663 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
664 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
665 self.assertEqual(3, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
666 self.assertTrue(a[0].startswith('Warning')) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
667 self.assertEqual('BasicDirectory', a[1]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
668 self.assertEqual('', a[2]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
669 |
| 45 | 670 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
671 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
672 self.assertEqual(1, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
673 self.assertEqual('', a[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
674 |
| 45 | 675 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
676 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
677 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
678 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
679 os.remove('/tmp/DICOMDIR') |
| 10 | 680 |
| 681 | |
| 682 def test_protection(self): | |
| 683 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 684 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 685 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 686 a = DoGet(_REMOTE, '/patients')[0] | |
| 687 b = DoGet(_REMOTE, '/patients')[1] | |
| 688 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 689 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 690 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 691 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 692 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 693 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 694 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 695 | |
| 696 | |
| 12 | 697 def test_raw_tags(self): |
| 10 | 698 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 699 | |
| 700 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 701 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 702 | |
| 703 s = '/instances/%s/content/' % i | |
| 704 | |
| 705 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 706 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 707 | |
| 708 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 709 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 710 | |
| 711 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 712 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 713 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 714 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 715 | |
| 716 for i in DoGet(_REMOTE, '/instances'): | |
| 717 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 718 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 719 | |
| 720 | |
| 721 def test_raw_tags_mdn(self): | |
| 722 # Bug reported by Cyril Paulus | |
| 723 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 724 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 725 | |
| 726 | |
| 727 def test_modify_instance(self): | |
| 728 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 729 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 730 json.dumps({ | |
| 731 "Replace" : { | |
| 732 "PatientName" : "hello", | |
| 733 #"PatientID" : "world" | |
| 734 }, | |
| 735 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
736 "RemovePrivateTags" : True |
| 10 | 737 }), |
| 738 'application/json') | |
| 739 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 740 | |
| 741 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 742 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 743 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 744 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 745 | |
| 746 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 747 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 748 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 749 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 750 | |
| 751 | |
| 752 def test_modify_series(self): | |
| 753 # Upload 4 images from the same series | |
| 754 for i in range(4): | |
| 755 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 756 | |
| 757 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 758 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 759 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 760 'application/json')['ID'] | |
| 761 | |
| 762 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 763 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 764 self.assertEqual(4, len(instances)) | |
| 765 for i in instances: | |
| 766 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 767 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 768 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 769 | |
| 770 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 771 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 772 | |
| 773 | |
| 774 def test_modify_study(self): | |
| 775 # Upload 4 images from the 2 series of the same study | |
| 776 for i in range(4): | |
| 777 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 778 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 779 | |
| 780 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 781 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 782 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 783 'application/json')['ID'] | |
| 784 | |
| 785 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 786 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 787 self.assertEqual(2, len(series)) | |
| 788 for s in series: | |
| 789 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 790 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 791 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 792 | |
| 793 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 794 for i in instances: | |
| 795 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 796 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 797 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 798 | |
| 799 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 800 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 801 | |
| 802 | |
| 803 def test_anonymize_series(self): | |
| 804 # Upload 4 images from the same series | |
| 805 for i in range(4): | |
| 806 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 807 | |
| 808 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 809 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 810 '{}', | |
| 811 'application/json')['ID'] | |
| 812 | |
| 813 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 814 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 815 self.assertEqual(4, len(instances)) | |
| 816 for i in instances: | |
| 817 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 818 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 819 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 820 | |
| 821 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 822 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 823 | |
| 824 | |
| 825 def test_anonymize_study(self): | |
| 826 # Upload 4 images from the 2 series of the same study | |
| 827 for i in range(4): | |
| 828 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 829 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 830 | |
| 831 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 832 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 833 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 834 'application/json')['ID'] | |
| 835 | |
| 836 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 837 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 838 self.assertEqual(2, len(series)) | |
| 839 for s in series: | |
| 840 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 841 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 842 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 843 | |
| 844 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 845 for i in instances: | |
| 846 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 847 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 848 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 849 | |
| 850 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 851 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 852 |
| 853 | |
| 854 | |
| 855 def test_storescu(self): | |
| 856 # Check emptiness | |
| 857 e = DoGet(_REMOTE, '/exports') | |
| 858 self.assertEqual(0, len(e['Exports'])) | |
| 859 self.assertEqual(0, e['Last']) | |
| 860 self.assertTrue(e['Done']) | |
| 861 e = DoGet(_REMOTE, '/exports?last') | |
| 862 self.assertEqual(0, len(e['Exports'])) | |
| 863 self.assertEqual(0, e['Last']) | |
| 864 self.assertTrue(e['Done']) | |
| 865 | |
| 866 # Add 1 instance | |
| 867 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 868 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 869 | |
| 870 # Export the instance | |
| 871 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 872 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 873 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 874 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 875 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 876 | |
| 877 e = DoGet(_REMOTE, '/exports') | |
| 878 self.assertEqual(1, len(e['Exports'])) | |
| 879 self.assertTrue(e['Done']) | |
| 880 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 881 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 882 self.assertEqual(1, len(e['Exports'])) | |
| 883 self.assertTrue(e['Done']) | |
| 884 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 885 e = DoGet(_REMOTE, '/exports?last') | |
| 886 self.assertEqual(1, len(e['Exports'])) | |
| 887 self.assertTrue(e['Done']) | |
| 888 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 889 seqInstance = e['Last'] | |
| 890 | |
| 891 # Export the series | |
| 892 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 893 | |
| 894 e = DoGet(_REMOTE, '/exports') | |
| 895 self.assertEqual(2, len(e['Exports'])) | |
| 896 self.assertTrue(e['Done']) | |
| 897 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 898 seqSeries = e['Last'] | |
| 899 self.assertNotEqual(seqInstance, seqSeries) | |
| 900 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 901 self.assertEqual(1, len(e['Exports'])) | |
| 902 self.assertFalse(e['Done']) | |
| 903 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 904 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 905 self.assertEqual(1, len(e['Exports'])) | |
| 906 self.assertTrue(e['Done']) | |
| 907 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 908 e = DoGet(_REMOTE, '/exports?last') | |
| 909 self.assertEqual(1, len(e['Exports'])) | |
| 910 self.assertTrue(e['Done']) | |
| 911 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 912 | |
| 913 # Export the study | |
| 914 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 915 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 916 | |
| 917 # Export the patient | |
| 918 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 919 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 920 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 921 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 922 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 923 | |
| 924 e = DoGet(_REMOTE, '/exports') | |
| 925 self.assertEqual(4, len(e['Exports'])) | |
| 926 self.assertTrue(e['Done']) | |
| 927 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 928 seqPatient = e['Last'] | |
| 929 self.assertNotEqual(seqInstance, seqSeries) | |
| 930 self.assertNotEqual(seqSeries, seqStudy) | |
| 931 self.assertNotEqual(seqStudy, seqPatient) | |
| 932 self.assertTrue(seqInstance < seqSeries) | |
| 933 self.assertTrue(seqSeries < seqStudy) | |
| 934 self.assertTrue(seqStudy < seqPatient) | |
| 935 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 936 self.assertEqual(1, len(e['Exports'])) | |
| 937 self.assertFalse(e['Done']) | |
| 938 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 939 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 940 self.assertEqual(1, len(e['Exports'])) | |
| 941 self.assertFalse(e['Done']) | |
| 942 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 943 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 944 self.assertEqual(1, len(e['Exports'])) | |
| 945 self.assertFalse(e['Done']) | |
| 946 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 947 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 948 self.assertEqual(1, len(e['Exports'])) | |
| 949 self.assertTrue(e['Done']) | |
| 950 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 951 e = DoGet(_REMOTE, '/exports?last') | |
| 952 self.assertEqual(1, len(e['Exports'])) | |
| 953 self.assertTrue(e['Done']) | |
| 954 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 955 | |
| 956 | |
| 957 # Check the content of the logged information | |
| 958 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 959 | |
| 960 if 'PatientID' in e[0]: | |
| 961 # Since Orthanc 0.8.6 | |
| 962 patient = 'PatientID' | |
| 963 study = 'StudyInstanceUID' | |
| 964 series = 'SeriesInstanceUID' | |
| 965 instance = 'SOPInstanceUID' | |
| 966 else: | |
| 967 # Up to Orthanc 0.8.5 | |
| 968 patient = 'PatientId' | |
| 969 study = 'StudyInstanceUid' | |
| 970 series = 'SeriesInstanceUid' | |
| 971 instance = 'SopInstanceUid' | |
| 972 | |
| 973 for k in range(4): | |
| 974 self.assertTrue('Date' in e[k]) | |
| 975 self.assertTrue('Seq' in e[k]) | |
| 976 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 977 | |
| 978 self.assertEqual(10, len(e[0])) | |
| 979 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 980 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 981 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 982 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 983 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 984 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 985 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 986 | |
| 987 self.assertEqual(9, len(e[1])) | |
| 988 self.assertEqual('Series', e[1]['ResourceType']) | |
| 989 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 990 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 991 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 992 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 993 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 994 | |
| 995 self.assertEqual(8, len(e[2])) | |
| 996 self.assertEqual('Study', e[2]['ResourceType']) | |
| 997 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 998 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 999 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1000 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1001 | |
| 1002 self.assertEqual(7, len(e[3])) | |
| 1003 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1004 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1005 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1006 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1007 | |
| 1008 DropOrthanc(_REMOTE) | |
| 1009 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1010 | |
| 1011 | |
| 1012 def test_store_peer(self): | |
| 1013 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1014 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1015 | |
| 1016 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1017 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1018 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1019 | |
| 1020 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1021 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1022 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1023 | |
| 1024 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1025 | |
| 1026 DropOrthanc(_REMOTE) | |
| 1027 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1028 | |
| 1029 | |
| 1030 def test_bulk_storescu(self): | |
| 1031 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1032 | |
| 1033 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1034 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1035 | |
| 1036 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1037 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1038 | |
| 1039 DropOrthanc(_LOCAL) | |
| 1040 | |
| 1041 # Send using patient's UUID | |
| 1042 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1043 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1044 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1045 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1046 | |
| 1047 | |
| 1048 def test_color(self): | |
| 1049 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1050 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1051 self.assertEqual("RGB", im.mode) | |
| 1052 self.assertEqual(41, im.size[0]) | |
| 1053 self.assertEqual(41, im.size[1]) | |
| 1054 | |
| 1055 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1056 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1057 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1058 | |
| 1059 | |
| 12 | 1060 def test_faking_ruby_put(self): |
| 1061 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1062 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1063 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1064 a = DoGet(_REMOTE, '/patients')[0] | |
| 1065 b = DoGet(_REMOTE, '/patients')[1] | |
| 1066 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1067 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1068 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1069 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1070 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1071 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1072 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1073 | |
| 1074 | |
| 1075 def test_faking_ruby_delete(self): | |
| 1076 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1077 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1078 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1079 a = DoGet(_REMOTE, '/patients')[0] | |
| 1080 b = DoGet(_REMOTE, '/patients')[1] | |
| 1081 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1082 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1083 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1084 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1085 | |
| 1086 | |
| 1087 def test_faking_google_put(self): | |
| 1088 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1089 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1090 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1091 a = DoGet(_REMOTE, '/patients')[0] | |
| 1092 b = DoGet(_REMOTE, '/patients')[1] | |
| 1093 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1094 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1095 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1096 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1097 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1098 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1099 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1100 | |
| 1101 | |
| 1102 def test_faking_google_delete(self): | |
| 1103 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1104 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1105 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1106 a = DoGet(_REMOTE, '/patients')[0] | |
| 1107 b = DoGet(_REMOTE, '/patients')[1] | |
| 1108 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1109 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1110 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1111 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1112 | |
| 1113 | |
| 1114 def test_lua(self): | |
| 1115 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1116 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1117 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1118 | |
| 1119 | |
| 1120 def test_metadata(self): | |
| 1121 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1122 p = DoGet(_REMOTE, '/patients')[0] | |
| 1123 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1124 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1125 |
| 1126 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
| 1127 self.assertEqual(1, len(m)) | |
| 1128 self.assertEqual('LastUpdate', m[0]) | |
| 1129 | |
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1130 # The lines below failed on Orthanc <= 1.8.2 |
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1131 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1132 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1133 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1134 |
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1135 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
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1136 self.assertEqual(1, len(m)) |
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1137 self.assertEqual('LastUpdate', m[0]) |
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1138 |
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1139 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1140 self.assertEqual(2, len(m)) |
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1141 self.assertTrue('LastUpdate' in m) |
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1142 |
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1143 # New in Orthanc 1.9.0 |
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1144 self.assertTrue('RemoteAET' in m) |
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1145 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1146 |
| 12 | 1147 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
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1148 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1149 self.assertEqual(9, len(m)) |
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1150 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1151 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1152 else: |
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1153 self.assertEqual(8, len(m)) |
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1154 |
| 12 | 1155 self.assertTrue('IndexInSeries' in m) |
| 1156 self.assertTrue('ReceptionDate' in m) | |
| 1157 self.assertTrue('RemoteAET' in m) | |
|
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1158 self.assertTrue('Origin' in m) |
|
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1159 self.assertTrue('TransferSyntax' in m) |
|
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1160 self.assertTrue('SopClassUid' in m) |
| 145 | 1161 self.assertTrue('RemoteIP' in m) |
| 1162 self.assertTrue('HttpUsername' in m) | |
|
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1163 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1164 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1165 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1166 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1167 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1168 |
| 1169 # Play with custom metadata | |
|
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1170 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1171 self.assertEqual('200', headers['status']) |
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1172 self.assertEqual('', body) |
|
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1173 |
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1174 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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1175 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1176 else: |
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1177 self.assertFalse('ETag' in headers) |
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1178 self.assertFalse('etag' in headers) |
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1179 |
| 12 | 1180 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1181 self.assertEqual(2, len(m)) | |
| 1182 self.assertTrue('LastUpdate' in m) | |
| 1183 self.assertTrue('5555' in m) | |
| 1184 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1185 |
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1186 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1187 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1188 'If-Match' : headers['etag'] |
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1189 }) |
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1190 else: |
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1191 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1192 |
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1193 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1194 self.assertEqual('200', headers['status']) |
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1195 self.assertEqual('hello', body) |
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1196 |
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1197 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1198 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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1199 'If-Match' : headers['etag'] |
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1200 }) |
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1201 else: |
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1202 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1203 |
| 12 | 1204 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1205 self.assertEqual(1, len(m)) | |
| 1206 self.assertTrue('LastUpdate' in m) | |
| 13 | 1207 |
| 1208 | |
| 1209 def test_statistics(self): | |
| 1210 # Upload 16 instances | |
| 1211 for i in range(4): | |
| 1212 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1213 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1214 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1215 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1216 | |
| 1217 s = DoGet(_REMOTE, '/statistics') | |
| 1218 self.assertEqual(16, s['CountInstances']) | |
| 1219 self.assertEqual(2, s['CountPatients']) | |
| 1220 self.assertEqual(2, s['CountStudies']) | |
| 1221 self.assertEqual(4, s['CountSeries']) | |
| 1222 d = int(s['TotalUncompressedSize']) | |
| 1223 | |
| 1224 e = 0 | |
| 1225 for patient in DoGet(_REMOTE, '/patients'): | |
| 1226 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1227 self.assertEqual(8, s['CountInstances']) | |
| 1228 self.assertEqual(1, s['CountStudies']) | |
| 1229 self.assertEqual(2, s['CountSeries']) | |
| 1230 e += int(s['UncompressedSize']) | |
| 1231 | |
| 1232 for study in DoGet(_REMOTE, '/studies'): | |
| 1233 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1234 self.assertEqual(8, s['CountInstances']) | |
| 1235 self.assertEqual(2, s['CountSeries']) | |
| 1236 e += int(s['UncompressedSize']) | |
| 1237 | |
| 1238 for series in DoGet(_REMOTE, '/series'): | |
| 1239 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1240 self.assertEqual(4, s['CountInstances']) | |
| 1241 e += int(s['UncompressedSize']) | |
| 1242 | |
| 1243 self.assertEqual(3 * d, e) | |
| 1244 | |
| 1245 | |
| 1246 def test_custom_attachment(self): | |
|
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1247 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1248 |
| 13 | 1249 patient = DoGet(_REMOTE, '/patients')[0] |
| 1250 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1251 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1252 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1253 | |
| 1254 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1255 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
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1256 |
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1257 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1258 if IsDicomUntilPixelDataStored(_REMOTE): |
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1259 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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|
1260 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
443
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1261 |
|
448
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|
1262 # New in Orthanc 1.10.0 |
|
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1263 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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1264 self.assertEqual(2, len(a)) |
|
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|
1265 self.assertEqual(1, a['dicom']) |
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|
1266 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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1267 |
|
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|
1268 else: |
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|
1269 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1270 |
|
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|
1271 # New in Orthanc 1.10.0 |
|
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1272 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
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1273 self.assertEqual(1, len(a)) |
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1274 self.assertEqual(1, a['dicom']) |
|
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1275 else: |
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1276 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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|
1277 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1278 |
|
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|
1279 # New in Orthanc 1.10.0 |
|
443
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|
1280 self.assertRaises(Exception, lambda: DoGet( |
|
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|
1281 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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1282 |
| 13 | 1283 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1284 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1285 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1286 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1287 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1288 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1289 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1290 | |
| 1291 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1292 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1293 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1294 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1295 size + | |
| 1296 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1297 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1298 | |
| 1299 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1300 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1301 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1302 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1303 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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|
1304 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
397
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|
1305 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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1306 }) |
|
393
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1307 |
|
394
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|
1308 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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|
1309 self.assertEqual('200', headers['status']) |
|
393
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|
1310 self.assertEqual('world2', body) |
| 13 | 1311 |
| 1312 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
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|
1313 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
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|
1314 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
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|
1315 }) |
| 13 | 1316 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1317 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1318 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1319 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1320 | |
| 1321 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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|
1322 |
|
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|
1323 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1324 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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|
1325 'If-Match' : headers['etag'] |
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1326 }) |
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1327 else: |
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|
1328 self.assertFalse('etag' in headers) |
|
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|
1329 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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1330 |
| 13 | 1331 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1332 | |
| 1333 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1334 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1335 | |
| 1336 | |
| 1337 def test_incoming_storescu(self): | |
| 1338 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1339 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
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diff
changeset
|
1340 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1341 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1342 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1343 | |
|
63
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|
1344 i = DoGet(_REMOTE, '/instances') |
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|
1345 self.assertEqual(1, len(i)) |
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|
1346 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
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1347 |
|
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|
1348 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1349 self.assertEqual(9, len(m)) |
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|
1350 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1351 else: |
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|
1352 self.assertEqual(8, len(m)) |
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1353 |
|
63
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|
1354 self.assertTrue('IndexInSeries' in m) |
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|
1355 self.assertTrue('ReceptionDate' in m) |
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|
1356 self.assertTrue('RemoteAET' in m) |
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|
1357 self.assertTrue('Origin' in m) |
|
89
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|
1358 self.assertTrue('TransferSyntax' in m) |
|
95
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|
1359 self.assertTrue('SopClassUid' in m) |
| 145 | 1360 self.assertTrue('RemoteIP' in m) |
| 1361 self.assertTrue('CalledAET' in m) | |
|
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|
1362 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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|
1363 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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|
1364 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
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|
1365 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
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|
1366 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
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1367 |
|
369
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|
1368 series = DoGet(_REMOTE, '/series')[0] |
|
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1369 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1370 self.assertEqual(2, len(m)) |
|
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1371 self.assertTrue('LastUpdate' in m) |
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1372 self.assertTrue('RemoteAET' in m) |
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1373 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1374 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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1375 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
|
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1376 |
| 13 | 1377 |
| 1378 def test_incoming_findscu(self): | |
| 1379 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1380 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1381 | |
| 1382 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1383 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1384 self.assertEqual(2, len(patientNames)) | |
| 1385 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1386 self.assertTrue('Anonymized' in patientNames) | |
| 1387 | |
| 1388 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1389 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1390 self.assertEqual(2, len(series)) | |
| 1391 self.assertTrue('20070208' in series) | |
| 1392 self.assertTrue('19980312' in series) | |
| 1393 | |
|
335
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changeset
|
1394 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
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diff
changeset
|
1395 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
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1396 self.assertEqual(1, len(series)) |
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1397 self.assertTrue('19980312' in series) |
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1398 |
| 13 | 1399 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1400 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1401 self.assertEqual(1, len(series)) | |
| 1402 | |
| 1403 # Test the "CaseSentitivePN" flag (false by default) | |
| 1404 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1405 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1406 self.assertEqual(1, len(series)) | |
|
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1407 |
| 70 | 1408 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1409 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1410 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1411 self.assertEqual(2, len(studies)) | |
| 1412 self.assertTrue('20070208' in studies) | |
| 1413 self.assertTrue('19980312' in studies) | |
| 1414 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1415 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1416 self.assertEqual(1, len(studies)) | |
| 1417 self.assertTrue('19980312' in studies) | |
| 1418 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1419 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1420 self.assertEqual(1, len(studies)) | |
| 1421 self.assertTrue('19980312' in studies) | |
|
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1422 |
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1423 # Test that "Retrieve AE Title (0008,0054)" is present, which |
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1424 # was *not* the case in Orthanc <= 1.7.2 |
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1425 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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1426 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
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1427 self.assertEqual(2, len(instances)) |
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1428 self.assertEqual('ORTHANC', instances[0].strip()) |
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1429 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1430 |
| 1431 | |
|
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1432 def test_incoming_findscu_2(self): |
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1433 # This test fails if "LookupMode_DatabaseOnly" is used |
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1434 # (sequences are not available in this mode, and only main |
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1435 # DICOM tags are returned) |
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1436 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1437 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1438 |
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1439 # Test returning sequence values (only since Orthanc 0.9.5) |
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1440 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1441 sequences = re.findall('\(0008,2112\)', i) |
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1442 self.assertEqual(1, len(sequences)) |
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1443 |
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1444 # Test returning a non-main DICOM tag, |
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1445 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1446 # "MEDPC" in "ColorTestImageJ.dcm" |
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1447 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1448 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1449 self.assertEqual(1, len(tags)) |
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1450 |
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1451 |
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1452 def test_incoming_findscu_3(self): |
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1453 # This test fails if "LookupMode_DatabaseOnly" or |
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1454 # "LookupMode_DiskOnAnswer" is used, as |
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1455 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1456 # tag, as thus a constraint cannot be applied to it |
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1457 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1458 |
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1459 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1460 sequences = re.findall('\(0018,1010\)', i) |
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1461 self.assertEqual(1, len(sequences)) |
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1462 |
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1463 |
| 13 | 1464 def test_incoming_movescu(self): |
| 1465 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1466 |
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1467 # No matching patient, so no job is created |
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1468 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1469 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1470 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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1471 |
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1472 # 1 Matching patient, track the job |
| 138 | 1473 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1474 '--patient', | |
| 1475 '-k', '0008,0052=PATIENT', | |
| 1476 '-k', 'PatientID=12345678' | |
| 1477 ]))) | |
| 13 | 1478 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1479 | |
| 1480 | |
| 1481 def test_findscu(self): | |
| 1482 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1483 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1484 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1485 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1486 | |
| 1487 # Test the "find-patient" level | |
| 1488 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1489 self.assertEqual(1, len(p)) | |
| 1490 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1491 | |
| 1492 # Test wildcards constraints. The "LO" value representation | |
| 1493 # for PatientID is always case-sensitive, but the "PN" for | |
| 1494 # PatientName might depend on the implementation: | |
| 1495 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1496 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1497 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1498 self.assertEqual(1, len(p)) | |
| 1499 | |
| 1500 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1501 self.assertEqual(1, len(p)) | |
| 1502 | |
| 1503 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1504 self.assertEqual(1, len(p)) | |
| 1505 | |
| 1506 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1507 self.assertEqual(1, len(p)) | |
| 1508 | |
| 1509 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1510 self.assertEqual(0, len(p)) | |
| 1511 | |
| 1512 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1513 self.assertEqual(0, len(p)) | |
| 1514 | |
| 1515 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1516 self.assertEqual(0, len(p)) | |
| 1517 | |
| 1518 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1519 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1520 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1521 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1522 | |
| 1523 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1524 self.assertEqual(2, len(p)) | |
| 1525 | |
| 1526 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1527 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1528 self.assertEqual(1, len(s)) | |
| 1529 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1530 | |
| 1531 # Test range searches | |
| 1532 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1533 'StudyDate' : '-20070101' }) | |
| 1534 self.assertEqual(0, len(t)) | |
| 1535 | |
| 1536 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1537 'StudyDate' : '20090101-' }) | |
| 1538 self.assertEqual(0, len(t)) | |
| 1539 | |
| 1540 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1541 'StudyDate' : '20070101-' }) | |
| 1542 self.assertEqual(1, len(t)) | |
| 1543 | |
| 1544 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1545 'StudyDate' : '-20090101' }) | |
| 1546 self.assertEqual(1, len(t)) | |
| 1547 | |
| 1548 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1549 'StudyDate' : '20070207-20070207' }) | |
| 1550 self.assertEqual(0, len(t)) | |
| 1551 | |
| 1552 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1553 'StudyDate' : '20070208-20070208' }) | |
| 1554 self.assertEqual(1, len(t)) | |
| 1555 | |
| 1556 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1557 'StudyDate' : '20070209-20070209' }) | |
| 1558 self.assertEqual(0, len(t)) | |
| 1559 | |
| 1560 # Test the ModalitiesInStudy tag | |
| 1561 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1562 'PatientID' : 'B9uTHKOZ', | |
| 1563 'ModalitiesInStudy' : 'US' }) | |
| 1564 self.assertEqual(0, len(t)) | |
| 1565 | |
| 1566 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1567 'PatientID' : 'B9uTHKOZ', | |
| 1568 'ModalitiesInStudy' : 'CT' }) | |
| 1569 self.assertEqual(1, len(t)) | |
| 1570 | |
| 1571 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1572 'PatientID' : 'B9uTHKOZ', | |
| 1573 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1574 self.assertEqual(1, len(t)) | |
| 1575 | |
| 1576 # Test the "find-series" level | |
| 1577 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1578 'PatientID' : 'B9uTHKOZ', | |
| 1579 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1580 self.assertEqual(1, len(t)) | |
| 1581 | |
| 1582 # Test "\" separator | |
| 1583 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1584 'PatientID' : 'B9uTHKOZ', | |
| 1585 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1586 'Modality' : 'MR\\CT\\US' }) | |
| 1587 self.assertEqual(1, len(t)) | |
| 1588 | |
| 1589 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1590 'PatientID' : 'B9uTHKOZ', | |
| 1591 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1592 'Modality' : 'MR\\US' }) | |
| 1593 self.assertEqual(0, len(t)) | |
| 1594 | |
| 1595 | |
| 1596 def test_update_modalities(self): | |
| 1597 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1598 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1599 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1600 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1601 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1602 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1603 DoDelete(_REMOTE, '/modalities/tata') |
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1604 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1605 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
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1606 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1607 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1608 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1609 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1610 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1611 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1612 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1613 |
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1614 # New in Orthanc 1.8.1 |
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1615 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1616 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1617 |
| 13 | 1618 DoDelete(_REMOTE, '/modalities/toto') |
| 1619 DoDelete(_REMOTE, '/modalities/tata') | |
| 1620 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1621 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1622 | |
| 1623 | |
| 1624 def test_update_peers(self): | |
| 1625 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1626 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1627 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1628 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1629 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1630 'Username': 'user', | |
| 1631 'Password' : 'pass', | |
| 1632 'RemoteSelf' : 'self' }) | |
| 128 | 1633 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1634 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1635 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1636 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1637 |
| 1638 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1639 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1640 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1641 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1642 else: | |
| 1643 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1644 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1645 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1646 | |
| 128 | 1647 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1648 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1649 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1650 |
| 13 | 1651 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1652 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1653 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1654 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1655 |
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1656 # New in Orthanc 1.8.1 |
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1657 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1658 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1659 |
| 13 | 1660 DoDelete(_REMOTE, '/peers/toto') |
| 1661 DoDelete(_REMOTE, '/peers/tata') | |
| 1662 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1663 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1664 | |
| 1665 | |
| 1666 def test_mesterhazy_modification(self): | |
| 1667 # When I modify a series ( eg. curl | |
| 1668 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1669 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1670 # series is added to a new Study, instead of the existing | |
| 1671 # Study. Fixed in Orthanc 0.7.5 | |
| 1672 | |
| 1673 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1674 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1675 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1676 | |
| 1677 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1678 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1679 | |
| 1680 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1681 | |
| 1682 | |
| 1683 def test_create(self): | |
| 1684 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1685 json.dumps({ | |
| 1686 'PatientName' : 'Jodogne', | |
| 1687 'Modality' : 'CT', | |
| 58 | 1688 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1689 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1690 })) | |
| 1691 | |
| 1692 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1693 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1694 | |
| 1695 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1696 self.assertEqual((5, 5), png.size) | |
| 1697 | |
| 38 | 1698 j = DoGet(_REMOTE, i['Path']) |
| 1699 self.assertEqual('Instance', j['Type']) | |
| 1700 self.assertEqual(j['ID'], i['ID']) | |
| 1701 | |
| 13 | 1702 |
| 1703 def test_pilates(self): | |
| 1704 # "SCU failed error when accessing orthanc with osirix" by | |
| 1705 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1706 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1707 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1708 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1709 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1710 | |
| 1711 | |
| 1712 def test_shared_tags(self): | |
| 1713 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1714 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1715 p = DoGet(_REMOTE, '/patients')[0] | |
| 1716 | |
| 1717 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1718 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
|
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1719 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1720 |
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1721 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1722 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1723 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1724 |
| 13 | 1725 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1726 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1727 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1728 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1729 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1730 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1731 | |
| 1732 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1733 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1734 | |
| 1735 | |
| 1736 def test_modules(self): | |
| 1737 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1738 p = DoGet(_REMOTE, '/patients')[0] | |
| 1739 s = DoGet(_REMOTE, '/studies')[0] | |
| 1740 t = DoGet(_REMOTE, '/series')[0] | |
| 1741 | |
| 1742 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1743 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1744 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1745 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1746 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1747 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1748 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1749 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1750 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1751 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1752 | |
| 1753 | |
| 1754 def test_auto_directory(self): | |
| 1755 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1756 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1757 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1758 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1759 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1760 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1761 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1762 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1763 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1764 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1765 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1766 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1767 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1768 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1769 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1770 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1771 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1772 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1773 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1774 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1775 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1776 |
| 1777 | |
| 1778 def test_echo(self): | |
| 1779 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1780 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1781 |
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1782 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1783 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1784 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1785 |
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1786 # New in Orthanc 1.8.1 |
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1787 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1788 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1789 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1790 |
| 353 | 1791 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1792 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1793 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1794 'AET' : _REMOTE['DicomAet'], | |
| 1795 'Host' : _REMOTE['Server'], | |
| 1796 'Port' : _REMOTE['DicomPort'], | |
| 1797 'CheckFind' : True | |
| 1798 }) | |
| 1799 | |
| 13 | 1800 |
| 1801 def test_xml(self): | |
| 1802 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1803 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1804 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1805 self.assertEqual(len(items), len(json)) | |
| 1806 | |
| 1807 self.assertTrue('dicom-conformance' in json) | |
| 1808 | |
| 1809 ok = False | |
| 1810 for i in items: | |
| 1811 if i.childNodes[0].data == 'dicom-conformance': | |
| 1812 ok = True | |
| 1813 self.assertTrue(ok) | |
| 1814 | |
| 1815 | |
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1816 def test_googlecode_issue_16(self): |
| 13 | 1817 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1818 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1819 self.assertEqual('0018,1063', t) | |
| 1820 | |
| 1821 | |
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1822 def test_googlecode_issue_22(self): |
| 13 | 1823 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1824 a = [ | |
| 1825 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1826 "c69eee9a51eea3e8611e82e578897254", | |
| 1827 "315666be83e2d0111c77bc0996d84901", | |
| 1828 "3e27aa959d911172c48a1436443c72b1", | |
| 1829 "958642c9e7e9d232d3869faff546058c", | |
| 1830 "5e7ea8e3e4230cae707d143481355c59", | |
| 1831 "eda37f83558d858a596175aed8b2ad47", | |
| 1832 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1833 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1834 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1835 "e2f39e85896fe58876654b94cd0b5013", | |
| 1836 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1837 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1838 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1839 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1840 "806b8b3e300c615099c11a5ec23465aa", | |
| 1841 "7c836aa298ba6eef96434579af631a11", | |
| 1842 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1843 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1844 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1845 "44e6670f127e612a2b4aa60a0d207698", | |
| 1846 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1847 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1848 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1849 ] | |
| 1850 | |
| 1851 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1852 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1853 | |
| 1854 for i in range(len(a)): | |
| 1855 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1856 | |
| 1857 | |
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1858 def test_googlecode_issue_19(self): |
|
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1859 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1860 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1861 | |
| 1862 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1863 if not HasGdcmPlugin(_REMOTE): |
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1864 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1865 |
| 1866 | |
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1867 def test_googlecode_issue_37(self): |
| 13 | 1868 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1869 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1870 | |
| 1871 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1872 'CaseSensitive' : True, | |
| 1873 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1874 self.assertEqual(1, len(a)) | |
| 14 | 1875 |
| 1876 | |
| 1877 def test_rest_find(self): | |
| 1878 # Upload 8 instances | |
| 1879 for i in range(2): | |
| 1880 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1881 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1882 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1883 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1884 | |
| 1885 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1886 'CaseSensitive' : False, | |
|
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1887 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1888 self.assertEqual(1, len(a)) |
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1889 |
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1890 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1891 'CaseSensitive' : False, |
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1892 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1893 self.assertEqual(2, len(a)) |
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1894 |
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1895 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1896 'CaseSensitive' : False, |
| 14 | 1897 'Query' : { 'PatientName' : '*n*' }}) |
| 1898 self.assertEqual(2, len(a)) | |
| 1899 | |
| 1900 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1901 'CaseSensitive' : True, | |
| 1902 'Query' : { 'PatientName' : '*n*' }}) | |
| 1903 self.assertEqual(0, len(a)) | |
| 1904 | |
| 1905 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1906 'Level' : 'Patient', | |
| 1907 'CaseSensitive' : False, | |
| 1908 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1909 self.assertEqual(1, len(a)) | |
| 1910 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1911 | |
| 1912 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1913 'CaseSensitive' : True, | |
| 1914 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1915 self.assertEqual(0, len(a)) | |
| 1916 | |
| 1917 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1918 'CaseSensitive' : True, | |
| 1919 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1920 self.assertEqual(1, len(a)) | |
| 1921 | |
| 1922 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1923 'CaseSensitive' : True, | |
| 1924 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1925 self.assertEqual(2, len(a)) | |
| 1926 | |
| 1927 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1928 'CaseSensitive' : True, | |
| 1929 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1930 self.assertEqual(4, len(a)) | |
| 1931 | |
| 1932 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1933 self.assertEqual(2, len(a)) | |
| 1934 | |
| 1935 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1936 self.assertEqual(2, len(a)) | |
| 1937 | |
| 1938 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1939 self.assertEqual(4, len(a)) | |
| 1940 | |
| 1941 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1942 self.assertEqual(8, len(a)) | |
| 1943 | |
|
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1944 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1945 'Expand' : True, |
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1946 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1947 self.assertEqual(1, len(a)) |
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1948 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1949 |
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1950 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1951 'Expand' : True, |
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1952 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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1953 self.assertEqual(2, len(a)) |
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1954 for i in range(2): |
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1955 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1956 |
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1957 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1958 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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1959 self.assertEqual(0, len(a)) |
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1960 |
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1961 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1962 'Expand' : True, |
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1963 'Query' : { 'StudyDate' : '-20061201' }}) |
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1964 self.assertEqual(1, len(a)) |
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1965 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1966 |
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1967 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1968 'Expand' : True, |
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1969 'Query' : { 'StudyDate' : '-20051201' }}) |
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1970 self.assertEqual(0, len(a)) |
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1971 |
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1972 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1973 'Expand' : True, |
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1974 'Query' : { 'StudyDate' : '20061201-' }}) |
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1975 self.assertEqual(2, len(a)) |
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1976 for i in range(2): |
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1977 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1978 |
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1979 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1980 'Expand' : True, |
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1981 'Query' : { 'StudyDate' : '20061202-' }}) |
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1982 self.assertEqual(1, len(a)) |
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1983 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1984 |
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1985 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1986 'Expand' : True, |
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1987 'Query' : { 'StudyDate' : '20080819-' }}) |
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1988 self.assertEqual(1, len(a)) |
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1989 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1990 |
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1991 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1992 'Expand' : True, |
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1993 'Query' : { 'StudyDate' : '20080820-' }}) |
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1994 self.assertEqual(0, len(a)) |
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1995 |
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1996 |
| 14 | 1997 |
| 1998 def test_rest_query_retrieve(self): | |
| 1999 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2000 | |
| 2001 # Upload 8 instances | |
| 2002 for i in range(2): | |
| 2003 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2004 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2005 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2006 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2007 | |
| 2008 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2009 for p in DoGet(_REMOTE, '/patients'): | |
| 2010 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2011 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2012 | |
| 2013 for q in DoGet(_REMOTE, '/queries'): | |
| 2014 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2015 | |
| 2016 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2017 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2018 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
| 27 | 2019 'Query' : { |
| 2020 'PatientName' : '*NE*', | |
| 2021 'StudyDate' : '*', | |
| 2022 }})['ID'] | |
| 14 | 2023 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
| 2024 | |
| 2025 b = DoGet(_REMOTE, '/queries/%s' % a) | |
| 2026 self.assertTrue('answers' in b) | |
| 2027 self.assertTrue('level' in b) | |
| 2028 self.assertTrue('modality' in b) | |
| 2029 self.assertTrue('query' in b) | |
| 2030 self.assertTrue('retrieve' in b) | |
| 2031 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
| 2032 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
| 2033 | |
| 2034 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
| 27 | 2035 self.assertEqual(2, len(q)) |
| 14 | 2036 self.assertTrue('PatientName' in q) |
| 27 | 2037 self.assertTrue('StudyDate' in q) |
| 14 | 2038 self.assertEqual('*NE*', q['PatientName']) |
| 27 | 2039 self.assertEqual('*', q['StudyDate']) |
| 14 | 2040 |
| 2041 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 2042 | |
| 2043 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
| 2044 self.assertTrue('content' in s) | |
| 2045 self.assertTrue('retrieve' in s) | |
| 2046 | |
| 2047 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
| 2048 self.assertEqual('887', s['PatientID']) | |
| 2049 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
| 2050 | |
| 2051 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2052 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
| 2053 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 2054 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2055 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 2056 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 2057 | |
| 112 | 2058 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
| 14 | 2059 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 2060 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2061 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2062 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 2063 | |
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2064 # New in Orthanc 1.4.3 |
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2065 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2066 self.assertEqual(2, len(s)) |
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2067 for i in range(2): |
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2068 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2069 self.assertEqual('887', s[i]['PatientID']) |
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2070 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2071 |
| 14 | 2072 DoDelete(_REMOTE, '/queries/%s' % a) |
| 2073 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2074 | |
| 2075 | |
| 2076 def test_parent(self): | |
| 2077 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2078 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2079 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2080 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2081 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2082 self.assertEqual(instance, u) |
| 14 | 2083 |
| 2084 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2085 self.assertEqual('Patient', a['Type']) | |
| 2086 self.assertEqual(patient, a['ID']) | |
| 2087 | |
| 2088 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2089 self.assertEqual('Patient', a['Type']) | |
| 2090 self.assertEqual(patient, a['ID']) | |
| 2091 | |
| 2092 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2093 self.assertEqual('Study', a['Type']) | |
| 2094 self.assertEqual(study, a['ID']) | |
| 2095 | |
| 2096 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2097 self.assertEqual('Patient', a['Type']) | |
| 2098 self.assertEqual(patient, a['ID']) | |
| 2099 | |
| 2100 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2101 self.assertEqual('Study', a['Type']) | |
| 2102 self.assertEqual(study, a['ID']) | |
| 2103 | |
| 2104 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2105 self.assertEqual('Series', a['Type']) | |
| 2106 self.assertEqual(series, a['ID']) | |
| 2107 | |
| 2108 | |
| 2109 def test_shanon(self): | |
| 2110 def Anonymize(instance, replacements = {}): | |
| 119 | 2111 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2112 'Replace' : replacements, | |
| 2113 'Force' : True, | |
| 2114 }, 'application/json') | |
| 14 | 2115 |
| 2116 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2117 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2118 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2119 | |
| 2120 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2121 ids = [ 'ozp00SjY2xG', | |
| 2122 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2123 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2124 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2125 | |
| 2126 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2127 for i in range(4): | |
| 2128 self.assertNotEqual(ids[i], a[i]) | |
| 2129 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2130 | |
| 2131 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2132 for i in range(4): | |
| 2133 self.assertNotEqual(ids[i], a[i]) | |
| 2134 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2135 | |
| 2136 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2137 self.assertEqual('instance', a[3]) | |
| 2138 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2139 | |
| 2140 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2141 self.assertEqual('series', a[2]) | |
| 2142 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2143 | |
| 2144 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2145 self.assertEqual('study', a[1]) | |
| 2146 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2147 | |
| 2148 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2149 self.assertEqual('patient', a[0]) | |
| 2150 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2151 | |
| 2152 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2153 'StudyInstanceUID' : 'study', | |
| 2154 'SeriesInstanceUID' : 'series', | |
| 2155 'SOPInstanceUID' : 'instance' }), tags) | |
| 2156 self.assertEqual('patient', a[0]) | |
| 2157 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2158 | |
| 2159 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2160 | |
| 2161 | |
| 2162 def test_shanon_2(self): | |
| 2163 def Modify(instance, replacements = {}): | |
| 119 | 2164 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2165 'Replace' : replacements, | |
| 2166 'Force': True, | |
| 2167 }, 'application/json') | |
| 14 | 2168 |
| 2169 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2170 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2171 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2172 | |
| 2173 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2174 ids = [ 'ozp00SjY2xG', | |
| 2175 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2176 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2177 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2178 | |
| 2179 a = ExtractDicomTags(Modify(u), tags) | |
| 2180 self.assertEqual(ids[0], a[0]) | |
| 2181 self.assertEqual(ids[1], a[1]) | |
| 2182 self.assertEqual(ids[2], a[2]) | |
| 2183 self.assertNotEqual(ids[3], a[3]) | |
| 2184 self.assertEqual(0, len(a[4])) | |
| 2185 | |
| 2186 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2187 self.assertEqual(ids[0], a[0]) | |
| 2188 self.assertEqual(ids[1], a[1]) | |
| 2189 self.assertEqual(ids[2], a[2]) | |
| 2190 self.assertEqual('instance', a[3]) | |
| 2191 | |
| 2192 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2193 self.assertEqual(ids[0], a[0]) | |
| 2194 self.assertEqual(ids[1], a[1]) | |
| 2195 self.assertEqual('series', a[2]) | |
| 2196 self.assertNotEqual(ids[3], a[3]) | |
| 2197 | |
| 2198 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2199 self.assertEqual(ids[0], a[0]) | |
| 2200 self.assertEqual('study', a[1]) | |
| 2201 self.assertNotEqual(ids[2], a[2]) | |
| 2202 self.assertNotEqual(ids[3], a[3]) | |
| 2203 | |
| 2204 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2205 self.assertEqual('patient', a[0]) | |
| 2206 self.assertNotEqual(ids[1], a[1]) | |
| 2207 self.assertNotEqual(ids[2], a[2]) | |
| 2208 self.assertNotEqual(ids[3], a[3]) | |
| 2209 | |
| 2210 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2211 'StudyInstanceUID' : 'study', | |
| 2212 'SeriesInstanceUID' : 'series', | |
| 2213 'SOPInstanceUID' : 'instance' }), tags) | |
| 2214 self.assertEqual('patient', a[0]) | |
| 2215 self.assertEqual('study', a[1]) | |
| 2216 self.assertEqual('series', a[2]) | |
| 2217 self.assertEqual('instance', a[3]) | |
| 2218 | |
| 2219 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2220 | |
| 2221 | |
| 2222 def test_instances_tags(self): | |
| 2223 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2224 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2225 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2226 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2227 | |
| 2228 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2229 self.assertEqual(2, len(i)) | |
| 2230 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2231 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2232 | |
| 2233 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2234 self.assertEqual(2, len(i)) | |
| 2235 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2236 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2237 | |
| 2238 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2239 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2240 self.assertEqual(1, len(i)) | |
| 2241 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2242 | |
| 2243 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2244 self.assertEqual(1, len(i)) | |
| 2245 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2246 | |
|
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diff
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|
2247 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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parents:
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diff
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|
2248 self.assertEqual(1, len(i)) |
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diff
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|
2249 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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|
2250 |
| 14 | 2251 |
| 2252 def test_lookup(self): | |
| 2253 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2254 self.assertEqual(0, len(a)) | |
| 2255 | |
| 2256 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2257 | |
| 2258 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2259 self.assertEqual(1, len(a)) | |
| 2260 self.assertEqual('Patient', a[0]['Type']) | |
| 2261 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2262 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2263 | |
| 2264 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2265 self.assertEqual(1, len(a)) | |
| 2266 self.assertEqual('Study', a[0]['Type']) | |
| 2267 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2268 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2269 | |
| 2270 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2271 self.assertEqual(1, len(a)) | |
| 2272 self.assertEqual('Series', a[0]['Type']) | |
| 2273 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2274 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2275 | |
| 2276 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2277 self.assertEqual(1, len(a)) | |
| 2278 self.assertEqual('Instance', a[0]['Type']) | |
| 2279 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2280 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2281 | |
| 2282 DropOrthanc(_REMOTE) | |
| 2283 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2284 self.assertEqual(0, len(a)) | |
| 2285 | |
| 15 | 2286 |
| 2287 def test_autorouting(self): | |
| 2288 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2289 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2290 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2291 | |
| 2292 # Check that this version is >= 0.8.0 | |
| 2293 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2294 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2295 | |
| 2296 UploadInstance(_REMOTE, knee1) | |
| 2297 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2298 | |
| 2299 DropOrthanc(_REMOTE) | |
| 2300 DropOrthanc(_LOCAL) | |
| 174 | 2301 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2302 UploadInstance(_REMOTE, knee1) |
| 2303 UploadInstance(_REMOTE, knee2) | |
| 2304 UploadInstance(_REMOTE, other) | |
| 2305 WaitEmpty(_REMOTE) | |
| 174 | 2306 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2307 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2308 | |
| 2309 DropOrthanc(_REMOTE) | |
| 2310 DropOrthanc(_LOCAL) | |
| 174 | 2311 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2312 UploadInstance(_REMOTE, knee1) |
| 2313 UploadInstance(_REMOTE, knee2) | |
| 2314 UploadInstance(_REMOTE, other) | |
| 2315 WaitEmpty(_REMOTE) | |
| 174 | 2316 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2317 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2318 | |
| 2319 DropOrthanc(_REMOTE) | |
| 2320 DropOrthanc(_LOCAL) | |
| 174 | 2321 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2322 UploadInstance(_REMOTE, knee1) |
| 2323 WaitEmpty(_REMOTE) | |
| 174 | 2324 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2325 i = DoGet(_LOCAL, '/instances') |
| 2326 self.assertEqual(1, len(i)) | |
| 2327 | |
| 2328 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2329 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2330 f.flush() | |
| 45 | 2331 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2332 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2333 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2334 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2335 |
| 2336 | |
| 2337 def test_storescu_rf(self): | |
| 2338 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2339 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2340 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2341 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2342 |
| 2343 | |
| 2344 def test_anonymize_instance(self): | |
| 2345 def AnonymizeAndUpload(instanceId, parameters): | |
| 2346 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2347 'application/json'), 'application/dicom')['ID'] | |
| 2348 | |
| 2349 def ModifyAndUpload(instanceId, parameters): | |
| 2350 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2351 'application/json'), 'application/dicom')['ID'] | |
| 2352 | |
| 2353 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2354 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2355 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2356 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2357 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2358 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2359 | |
| 2360 b = AnonymizeAndUpload(a, '{}') | |
| 2361 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2362 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2363 | |
| 2364 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2365 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2366 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2367 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2368 | |
| 2369 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2370 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2371 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2372 | |
| 2373 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2374 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2375 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2376 | |
| 2377 # Examples from the Wiki | |
|
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parents:
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|
2378 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2379 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2380 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2381 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2382 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2383 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2384 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2385 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2386 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2387 | |
|
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parents:
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diff
changeset
|
2388 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2389 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2390 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2391 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2392 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2393 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2394 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2395 | |
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parents:
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diff
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|
2396 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2397 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2398 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2399 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2400 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2401 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2402 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2403 | |
| 2404 | |
| 2405 # Test modify non-existing | |
| 2406 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2407 json.dumps({ | |
| 2408 'PatientName' : 'Jodogne', | |
| 2409 'Modality' : 'CT', | |
| 2410 }))['ID'] | |
| 2411 | |
| 2412 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2413 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2414 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2415 | |
| 2416 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2417 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2418 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2419 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2420 | |
|
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2421 |
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|
2422 def test_incoming_jpeg(self): |
|
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|
2423 # since this test fails regularly on CI, enable verbosity |
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|
2424 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2425 |
|
468
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retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2426 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
61
967d44407308
test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2427 if acceptUnknownSopClassUid: |
|
967d44407308
test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2428 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
|
967d44407308
test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2429 else: |
|
967d44407308
test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2430 tmp = [ '-xs' ] |
|
967d44407308
test UnknownSopClassAccepted option
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parents:
60
diff
changeset
|
2431 |
|
468
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2432 while retries > 0: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2433 retries -= 1 |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2434 with open(os.devnull, 'w') as FNULL: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2435 try: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2436 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2437 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2438 GetDatabasePath(image) ], |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2439 stderr = FNULL) |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2440 |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2441 if expectSuccess: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2442 return |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2443 except subprocess.CalledProcessError as e: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2444 print('storescu failed with error code: %s' % str(e.returncode)) |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2445 if not expectSuccess: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2446 raise e |
|
21
2a29bcff60a7
tests of image decoding
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18
diff
changeset
|
2447 |
|
2a29bcff60a7
tests of image decoding
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18
diff
changeset
|
2448 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
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372
diff
changeset
|
2449 |
|
f673153f27a4
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parents:
372
diff
changeset
|
2450 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
|
f673153f27a4
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diff
changeset
|
2451 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
|
f673153f27a4
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372
diff
changeset
|
2452 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
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372
diff
changeset
|
2453 ]) |
|
f673153f27a4
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diff
changeset
|
2454 self.assertTrue('1.2.840.10008.1.2' in a) |
|
f673153f27a4
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diff
changeset
|
2455 self.assertTrue('1.2.840.10008.1.2.1' in a) |
|
f673153f27a4
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diff
changeset
|
2456 self.assertTrue('1.2.840.10008.1.2.2' in a) |
|
f673153f27a4
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372
diff
changeset
|
2457 self.assertEqual(3, len(a)) |
|
f673153f27a4
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372
diff
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|
2458 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
|
f673153f27a4
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diff
changeset
|
2459 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
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372
diff
changeset
|
2460 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
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parents:
372
diff
changeset
|
2461 else: |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2462 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2463 |
|
468
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2464 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails !! |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2465 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
465
diff
changeset
|
2466 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
21
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tests of image decoding
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18
diff
changeset
|
2467 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
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parents:
372
diff
changeset
|
2468 |
|
f673153f27a4
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2469 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2470 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
f673153f27a4
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372
diff
changeset
|
2471 self.assertGreaterEqual(42, len(a)) |
|
f673153f27a4
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Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2472 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2473 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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372
diff
changeset
|
2474 else: |
|
f673153f27a4
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Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2475 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
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Sebastien Jodogne <s.jodogne@gmail.com>
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372
diff
changeset
|
2476 |
|
62
f9c4ce95756f
removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
61
diff
changeset
|
2477 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2478 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2479 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2480 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2481 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2482 # set back normal verbosity |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2483 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
21
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2484 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2485 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2486 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2487 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2488 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2489 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2490 | |
| 2491 # This is JPEG lossless | |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2492 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2493 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
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133
diff
changeset
|
2494 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2495 |
|
21
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2496 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
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18
diff
changeset
|
2497 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
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18
diff
changeset
|
2498 |
|
2a29bcff60a7
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18
diff
changeset
|
2499 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
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18
diff
changeset
|
2500 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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18
diff
changeset
|
2501 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
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18
diff
changeset
|
2502 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
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18
diff
changeset
|
2503 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
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18
diff
changeset
|
2504 |
|
2a29bcff60a7
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diff
changeset
|
2505 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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diff
changeset
|
2506 |
|
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diff
changeset
|
2507 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
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18
diff
changeset
|
2508 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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diff
changeset
|
2509 |
|
2a29bcff60a7
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diff
changeset
|
2510 |
|
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diff
changeset
|
2511 def test_pixel_data(self): |
|
2a29bcff60a7
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diff
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|
2512 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
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diff
changeset
|
2513 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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diff
changeset
|
2514 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
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diff
changeset
|
2515 |
|
2a29bcff60a7
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18
diff
changeset
|
2516 phenixSize = 358 * 512 * 2 |
|
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18
diff
changeset
|
2517 colorSize = 1000 * 1000 * 3 |
|
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18
diff
changeset
|
2518 jpegSize = 51918 |
|
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18
diff
changeset
|
2519 |
|
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diff
changeset
|
2520 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
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diff
changeset
|
2521 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
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diff
changeset
|
2522 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
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diff
changeset
|
2523 |
|
2a29bcff60a7
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18
diff
changeset
|
2524 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2525 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
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diff
changeset
|
2526 |
|
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diff
changeset
|
2527 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2528 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2529 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2530 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2531 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2532 brainix = [ |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2533 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2534 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2535 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2536 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2537 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2538 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2539 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2540 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2541 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2543 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2544 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2545 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2546 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2547 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2548 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2552 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2568 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2569 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2570 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2571 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2572 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2573 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2574 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2575 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2576 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2577 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2578 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2579 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2580 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2581 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2582 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2583 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2584 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2585 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2586 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2587 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2588 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2589 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2590 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2591 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2592 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2593 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2594 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2595 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2618 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2619 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2620 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2621 |
| 2622 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2623 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2624 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2625 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
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89
diff
changeset
|
2626 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2627 |
| 22 | 2628 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2629 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2630 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2631 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2632 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2633 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2634 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2635 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2636 |
|
dbcbffb889da
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diff
changeset
|
2637 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
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89
diff
changeset
|
2638 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
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|
2639 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2640 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2641 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
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89
diff
changeset
|
2642 |
| 22 | 2643 def test_encodings(self): |
| 23 | 2644 # Latin-1 (ISO_IR 100) |
| 22 | 2645 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2646 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2647 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2648 |
| 2649 # Latin-2 (ISO_IR 101) | |
| 2650 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2651 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2652 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2653 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2654 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2655 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2656 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2657 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2658 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2659 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2660 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2661 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2662 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2663 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2664 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2665 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2666 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2667 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2668 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2669 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2670 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2671 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2672 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2673 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2674 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2675 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2676 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2677 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2678 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2679 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2680 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2681 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2682 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2683 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2684 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2685 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2686 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2687 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2688 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2689 |
| 174 | 2690 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2691 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2692 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2693 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2694 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2695 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2696 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2697 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2698 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2699 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2700 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2701 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2702 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2703 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2704 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2705 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2706 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2707 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2708 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2709 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2710 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2711 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2712 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2713 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2714 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2715 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2716 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2717 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2718 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2719 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2720 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2721 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2722 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2723 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2724 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2725 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2726 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2727 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2728 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2729 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
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test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2730 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2731 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
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diff
changeset
|
2732 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2733 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2734 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
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diff
changeset
|
2735 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
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diff
changeset
|
2736 |
|
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diff
changeset
|
2737 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
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diff
changeset
|
2738 s = {} |
|
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diff
changeset
|
2739 since = 0 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2740 while True: |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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28
diff
changeset
|
2741 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2742 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2743 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2744 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2745 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2746 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2747 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2748 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2749 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2750 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2751 self.assertTrue(instance in s) |
| 36 | 2752 |
| 2753 | |
| 2754 def test_create_pdf(self): | |
| 2755 # Upload 4 instances | |
| 2756 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2757 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2758 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2759 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2760 | |
| 2761 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2762 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2763 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2764 | |
| 2765 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2766 pdf = f.read() | |
| 2767 | |
| 2768 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2769 json.dumps({ | |
| 2770 'Tags' : { | |
| 2771 'PatientName' : 'Jodogne', | |
| 2772 'Modality' : 'CT', | |
| 2773 }, | |
| 2774 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2775 })) | |
| 2776 | |
| 2777 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2778 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2779 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2780 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 2781 |
| 2782 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2783 self.assertEqual(len(b), len(pdf) + 1) | |
| 2784 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2785 | |
| 2786 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2787 json.dumps({ | |
| 2788 'Parent' : brainixPatient, | |
| 2789 'Tags' : { | |
| 2790 'PatientName' : 'Jodogne', | |
| 2791 } | |
| 2792 }))) | |
| 2793 | |
| 2794 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2795 json.dumps({ | |
| 2796 'Parent' : brainixPatient, | |
| 2797 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2798 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2799 })) | |
| 2800 | |
| 2801 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2802 | |
| 2803 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2804 json.dumps({ | |
| 2805 'Parent' : brainixStudy, | |
| 2806 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2807 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2808 })) | |
| 2809 | |
| 2810 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2811 | |
| 2812 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2813 json.dumps({ | |
| 2814 'Parent' : brainixEpi, | |
| 37 | 2815 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2816 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2817 })) | |
| 2818 | |
| 2819 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2820 | |
| 2821 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2822 self.assertEqual(len(b), len(pdf)) | |
| 2823 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2824 | |
| 2825 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2826 |
| 2827 | |
| 2828 def test_create_series(self): | |
| 2829 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2830 json.dumps({ | |
| 2831 'Tags' : { | |
| 40 | 2832 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2833 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2834 'Modality' : 'CT', |
| 2835 }, | |
| 2836 'Content' : [ | |
| 40 | 2837 { |
| 2838 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2839 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2840 }, | |
| 38 | 2841 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2842 ] | |
| 2843 })) | |
| 2844 | |
| 2845 s = DoGet(_REMOTE, i['Path']) | |
| 2846 self.assertEqual('Series', s['Type']) | |
| 2847 self.assertEqual(s['ID'], i['ID']) | |
| 2848 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2849 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2850 self.assertEqual('Complete', s['Status']) | |
| 40 | 2851 |
| 2852 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2853 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2854 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2855 if 'ImageComments' in a: | |
| 2856 self.assertEqual('Tutu', a['ImageComments']) | |
| 2857 else: | |
| 2858 self.assertEqual('Tutu', b['ImageComments']) | |
| 2859 | |
| 2860 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2861 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2862 'Sébastien Jodogne') | |
| 47 | 2863 |
| 2864 | |
| 2865 def test_create_binary(self): | |
| 2866 binary = ''.join(map(chr, range(256))) | |
| 2867 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2868 tags = { | |
| 2869 'PatientName' : 'Jodogne', | |
| 2870 '8899-8899' : encoded | |
| 2871 } | |
| 2872 | |
| 2873 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2874 json.dumps({ | |
| 266 | 2875 'Tags' : tags, |
| 2876 'PrivateCreator' : 'TestBinary', | |
| 47 | 2877 })) |
| 2878 | |
| 2879 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2880 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2881 | |
| 2882 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2883 json.dumps({ | |
| 2884 'InterpretBinaryTags' : False, | |
| 266 | 2885 'Tags' : tags, |
| 2886 'PrivateCreator' : 'TestBinary', | |
| 47 | 2887 })) |
| 2888 | |
| 2889 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2890 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2891 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2892 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2893 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2894 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2895 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2896 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2897 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2898 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2899 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2900 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2901 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2902 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2903 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2904 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2905 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2906 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2907 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2908 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2909 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2910 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2911 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2912 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2913 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2914 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2915 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2916 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2917 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2918 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2919 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2920 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2921 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2922 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2923 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2924 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2925 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2926 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2927 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2928 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2929 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2930 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2931 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2932 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2933 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2934 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2935 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2936 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2937 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2938 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2939 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2940 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2941 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2942 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2943 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2944 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2945 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2946 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2947 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2948 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2949 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2950 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2951 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2952 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2953 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2954 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2955 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2956 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2957 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2958 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2959 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2960 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2961 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2962 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2963 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2964 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2965 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2966 }))['ID'] |
|
8de63d56cf11
test_create_sequence
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parents:
49
diff
changeset
|
2967 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2968 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2969 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2970 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2971 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2972 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2973 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2974 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2975 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2976 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2977 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2978 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2979 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2980 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2981 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2982 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2983 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2984 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2985 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2986 }), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2987 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2988 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2989 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2990 |
| 52 | 2991 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 2992 | |
| 2993 | |
| 2994 def test_compression(self): | |
| 2995 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2996 | |
|
380
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diff
changeset
|
2997 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
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diff
changeset
|
2998 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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diff
changeset
|
2999 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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diff
changeset
|
3000 self.assertEqual(1, len(aa)) |
|
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parents:
379
diff
changeset
|
3001 self.assertTrue('dicom' in aa) |
|
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parents:
379
diff
changeset
|
3002 else: |
|
b9adc7d06347
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parents:
379
diff
changeset
|
3003 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3004 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3005 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3006 |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3007 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3008 |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3009 # If "StorageCompression" is enabled in the Orthanc to be |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3010 # tested, uncompress the attachment before running the test |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3011 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3012 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3013 |
|
380
b9adc7d06347
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parents:
379
diff
changeset
|
3014 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3015 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3016 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
b9adc7d06347
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parents:
379
diff
changeset
|
3017 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3018 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
b9adc7d06347
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diff
changeset
|
3019 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3020 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
b9adc7d06347
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parents:
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diff
changeset
|
3021 |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3022 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3023 self.assertTrue('compress' in ops) |
| 3024 self.assertTrue('uncompress' in ops) | |
| 3025 self.assertTrue('is-compressed' in ops) | |
|
380
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3026 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3027 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
b9adc7d06347
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diff
changeset
|
3028 |
|
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379
diff
changeset
|
3029 # Re-compress the attachment |
|
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diff
changeset
|
3030 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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diff
changeset
|
3031 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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diff
changeset
|
3032 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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diff
changeset
|
3033 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3034 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3035 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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changeset
|
3036 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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diff
changeset
|
3037 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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diff
changeset
|
3038 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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changeset
|
3039 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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changeset
|
3040 |
|
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diff
changeset
|
3041 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
|
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changeset
|
3042 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3043 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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changeset
|
3044 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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changeset
|
3045 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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diff
changeset
|
3046 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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changeset
|
3047 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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changeset
|
3048 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3049 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3050 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3051 |
| 3052 | |
| 3053 def test_ordered_slices(self): | |
| 3054 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3055 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3056 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3057 self.assertEqual('Sequence', o['Type']) | |
| 3058 self.assertEqual(1, len(o['Dicom'])) | |
| 3059 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3060 self.assertEqual(76, len(o['Slices'])) | |
| 3061 for j in range(76): | |
| 3062 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3063 | |
| 68 | 3064 self.assertEqual(1, len(o['SlicesShort'])) |
| 3065 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3066 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3067 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3068 | |
| 53 | 3069 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3070 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3071 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3072 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3073 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3074 | |
| 3075 self.assertEqual('Volume', o['Type']) | |
| 3076 self.assertEqual(3, len(o['Dicom'])) | |
| 3077 self.assertEqual(3, len(o['Slices'])) | |
| 3078 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3079 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3080 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3081 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3082 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3083 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3084 | |
| 68 | 3085 self.assertEqual(3, len(o['SlicesShort'])) |
| 3086 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3087 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3088 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3089 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3090 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3091 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3092 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3093 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3094 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3095 | |
| 53 | 3096 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3097 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3098 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3099 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3100 | |
| 3101 self.assertEqual('Sequence', o['Type']) | |
| 3102 self.assertEqual(2, len(o['Dicom'])) | |
| 3103 self.assertEqual(2, len(o['Slices'])) | |
| 3104 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3105 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3106 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3107 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3108 |
| 68 | 3109 self.assertEqual(2, len(o['SlicesShort'])) |
| 3110 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3111 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3112 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3113 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3114 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3115 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3116 | |
| 3117 | |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3118 |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3119 def test_incoming_movescu_accession(self): |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3120 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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diff
changeset
|
3121 |
|
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testing asynchronous c-move
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diff
changeset
|
3122 # No matching patient, so no job is created |
|
54
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test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3123 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3124 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3125 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3126 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3127 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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diff
changeset
|
3128 |
|
412d5f70447e
testing asynchronous c-move
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diff
changeset
|
3129 # 1 Matching patient, track the job |
| 138 | 3130 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3131 '--study', | |
| 3132 '-k', '0008,0052=STUDY', | |
| 3133 '-k', 'AccessionNumber=A10003245599' | |
| 3134 ]))) | |
|
137
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testing asynchronous c-move
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diff
changeset
|
3135 |
|
54
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test_incoming_movescu_accession
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parents:
53
diff
changeset
|
3136 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
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parents:
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diff
changeset
|
3137 |
| 55 | 3138 |
| 3139 def test_dicom_to_json(self): | |
| 3140 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
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parents:
59
diff
changeset
|
3141 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
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diff
changeset
|
3142 |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
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59
diff
changeset
|
3143 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
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parents:
59
diff
changeset
|
3144 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
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fix test against dcmtk 3.6.1
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diff
changeset
|
3145 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3146 # Tags for compatibility with DCMTK 3.6.0 |
| 3147 'RETIRED_OtherPatientIDs', | |
| 3148 'OtherPatientIDs', | |
| 3149 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
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fix test against dcmtk 3.6.1
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diff
changeset
|
3150 ])) |
| 55 | 3151 |
| 3152 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3153 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3154 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
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diff
changeset
|
3155 ])) |
| 55 | 3156 |
|
60
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test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3157 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
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test backward compatibility with Orthanc 0.9.4
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59
diff
changeset
|
3158 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
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fix test against dcmtk 3.6.1
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diff
changeset
|
3159 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
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diff
changeset
|
3160 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
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parents:
59
diff
changeset
|
3161 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
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parents:
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diff
changeset
|
3162 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
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parents:
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diff
changeset
|
3163 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
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changeset
|
3164 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
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diff
changeset
|
3165 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
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59
diff
changeset
|
3166 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3167 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3168 a = json.loads(f.read()) |
|
378
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fix test_storescu_transcoding
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parents:
377
diff
changeset
|
3169 |
|
a4b8450a1158
fix test_storescu_transcoding
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parents:
377
diff
changeset
|
3170 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
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diff
changeset
|
3171 # reports are truncated starting with PixelData |
|
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379
diff
changeset
|
3172 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
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diff
changeset
|
3173 self.assertFalse('7fe1,0010' in t) |
|
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update tests following removal of dicom-as-json attachments
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379
diff
changeset
|
3174 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
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diff
changeset
|
3175 del a['7fe1,0010'] |
|
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fix test_storescu_transcoding
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parents:
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diff
changeset
|
3176 del a['7fe1,1001'] |
|
380
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diff
changeset
|
3177 else: |
|
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parents:
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diff
changeset
|
3178 self.assertTrue('7fe1,0010' in t) |
|
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379
diff
changeset
|
3179 self.assertTrue('7fe1,1001' in t) |
|
378
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fix test_storescu_transcoding
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diff
changeset
|
3180 |
|
65
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64
diff
changeset
|
3181 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
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fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3182 tt = (json.dumps(t) |
|
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fix for DCMTK 3.6.6
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diff
changeset
|
3183 .replace('2e+022', '2e+22') |
|
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fix for DCMTK 3.6.6
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diff
changeset
|
3184 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
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changeset
|
3185 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
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changeset
|
3186 self.assertEqual(aa, tt) |
| 57 | 3187 |
| 3188 | |
| 3189 def test_batch_archive(self): | |
| 3190 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3191 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3192 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3193 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3194 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3195 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3196 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3197 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3198 | |
| 3199 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3200 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3201 self.assertEqual(0, len(z.namelist())) | |
| 3202 | |
| 3203 # One patient | |
| 3204 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3205 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3206 self.assertEqual(4, len(z.namelist())) | |
| 3207 | |
| 3208 # One patient + twice its study + one series from other patient | |
| 3209 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3210 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3211 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3212 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3213 ]) | |
| 3214 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3215 self.assertEqual(6, len(z.namelist())) | |
| 3216 | |
| 3217 # One patient + one series + one instance | |
| 3218 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3219 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3220 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3221 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3222 ]) | |
| 3223 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3224 self.assertEqual(7, len(z.namelist())) | |
|
59
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test_decode_brainix_as_jpeg
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diff
changeset
|
3225 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3226 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3227 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
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diff
changeset
|
3228 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
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changeset
|
3229 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3230 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3231 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3232 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3233 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3234 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3235 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3236 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3237 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3238 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3239 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3240 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3241 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3242 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3243 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3244 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3245 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3246 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3247 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3248 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3249 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3250 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3251 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3252 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3253 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3254 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3255 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3256 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3257 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3258 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3259 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3260 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3261 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3262 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3263 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3264 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3265 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3266 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3267 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3268 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3269 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3270 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3271 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3272 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3273 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3274 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3275 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3276 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3277 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3278 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3279 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3280 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3281 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3282 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3283 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3284 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3285 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3286 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3287 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3288 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3289 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3290 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3291 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3292 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3293 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3294 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3295 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3296 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3297 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3298 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3299 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3300 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3301 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3302 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3303 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3304 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3305 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3306 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3307 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3308 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3309 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3310 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3311 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3312 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3313 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3314 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3315 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3316 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3317 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3318 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3319 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3320 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3321 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3322 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3323 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3324 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3325 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3326 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3327 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3328 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3329 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3330 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3331 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3332 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
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|
3333 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
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diff
changeset
|
3334 self.assertEqual(2, len(s)) |
|
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diff
changeset
|
3335 self.assertTrue('1 ' in s) |
|
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parents:
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diff
changeset
|
3336 self.assertTrue('2 ' in s) |
|
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diff
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|
3337 |
|
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diff
changeset
|
3338 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
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diff
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|
3339 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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diff
changeset
|
3340 self.assertEqual(1, len(s)) |
|
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diff
changeset
|
3341 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
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diff
changeset
|
3342 self.assertTrue('PT' in t) |
|
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diff
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|
3343 self.assertTrue('CT' in t) |
|
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3344 |
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diff
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|
3345 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
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|
3346 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
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|
3347 self.assertEqual(1, len(s)) |
|
176
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diff
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|
3348 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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|
3349 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
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|
3350 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
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|
3351 |
|
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diff
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|
3352 |
|
78
b89af51797ff
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parents:
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diff
changeset
|
3353 def test_decode_transfer_syntax(self): |
|
b89af51797ff
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parents:
74
diff
changeset
|
3354 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3355 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
b89af51797ff
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parents:
74
diff
changeset
|
3356 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
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parents:
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diff
changeset
|
3357 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
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diff
changeset
|
3358 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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diff
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|
3359 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
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parents:
87
diff
changeset
|
3360 |
|
78
b89af51797ff
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parents:
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diff
changeset
|
3361 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3362 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
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diff
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|
3363 else: |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3364 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
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parents:
74
diff
changeset
|
3365 self.assertEqual(m, md5) |
|
b89af51797ff
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parents:
74
diff
changeset
|
3366 |
|
b89af51797ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3367 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3368 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3369 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3370 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3371 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3372 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3373 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3374 | |
| 3375 # The 3 checks below don't work on big-endian | |
| 3376 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
b89af51797ff
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parents:
74
diff
changeset
|
3377 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3378 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
HasGdcmPlugin() test
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parents:
293
diff
changeset
|
3379 |
|
c2144cf4bd83
HasGdcmPlugin() test
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diff
changeset
|
3380 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3381 if not HasGdcmPlugin(_REMOTE): |
|
299
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parents:
293
diff
changeset
|
3382 Check('1.2.840.10008.1.2.4.90', None) |
|
c2144cf4bd83
HasGdcmPlugin() test
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diff
changeset
|
3383 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3384 |
| 3385 | |
| 3386 def test_raw_frame(self): | |
| 3387 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3388 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3389 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3390 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3391 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3392 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3393 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3394 | |
| 3395 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3396 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3397 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3398 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3399 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3400 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3401 self.assertEqual("L", im.mode) | |
| 3402 self.assertEqual(512, im.size[0]) | |
| 3403 self.assertEqual(512, im.size[1]) | |
| 3404 | |
| 3405 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3406 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3407 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3408 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3409 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3410 self.assertEqual(69214, len(a)) | |
| 3411 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3412 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3413 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3414 self.assertEqual("RGB", im.mode) | |
| 3415 self.assertEqual(512, im.size[0]) | |
| 3416 self.assertEqual(512, im.size[1]) | |
| 323 | 3417 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3418 self.assertEqual("RGB", im.mode) |
| 3419 self.assertEqual(512, im.size[0]) | |
| 3420 self.assertEqual(512, im.size[1]) | |
| 81 | 3421 |
| 3422 | |
| 3423 | |
| 3424 def test_rest_movescu(self): | |
| 3425 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3426 | |
| 3427 # Upload 4 instances | |
| 3428 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3429 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3430 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3431 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3432 | |
| 3433 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3434 for p in DoGet(_REMOTE, '/patients'): | |
| 3435 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3436 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3437 | |
| 3438 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3439 | |
| 3440 # Upload instance Brainix/Flair/IM-0001-0001.dcm | |
| 3441 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance', | |
| 3442 'Resources' : [ | |
| 3443 { | |
| 3444 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3445 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3446 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', | |
| 3447 } | |
| 3448 ]}) | |
| 3449 | |
| 3450 # Upload series Brainix/Flair/* | |
| 3451 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3452 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3453 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3454 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3455 | |
| 3456 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3457 'Resources' : [ | |
| 3458 { | |
| 3459 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3460 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3461 } | |
| 3462 ]}) | |
| 3463 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3464 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3465 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3466 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3467 | |
| 3468 # Upload series Brainix/Epi/* | |
| 3469 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3470 'Resources' : [ | |
| 3471 { | |
| 3472 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3473 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3474 } | |
| 3475 ]}) | |
| 3476 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3477 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3478 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3479 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3480 | |
| 3481 # Upload study Knee/* | |
| 3482 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3483 'Resources' : [ | |
| 3484 { | |
| 3485 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3486 } | |
| 3487 ]}) | |
| 3488 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3489 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3490 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3491 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3492 | |
| 3493 # Reset | |
| 3494 for p in DoGet(_REMOTE, '/patients'): | |
| 3495 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3496 | |
| 3497 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3498 | |
| 3499 | |
| 3500 # Upload all at once | |
| 3501 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3502 'Resources' : [ | |
| 3503 { | |
| 3504 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3505 }, | |
| 3506 { | |
| 3507 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3508 } | |
| 3509 ]}) | |
| 3510 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3511 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3512 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3513 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3514 | |
|
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diff
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|
3515 |
|
0401ef51f5c1
test_reconstruct_json
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diff
changeset
|
3516 |
|
0401ef51f5c1
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parents:
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diff
changeset
|
3517 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
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parents:
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diff
changeset
|
3518 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3519 |
|
0401ef51f5c1
test_reconstruct_json
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parents:
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diff
changeset
|
3520 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
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diff
changeset
|
3521 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
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changeset
|
3522 |
|
0401ef51f5c1
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parents:
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diff
changeset
|
3523 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
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|
3524 |
|
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update tests following removal of dicom-as-json attachments
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diff
changeset
|
3525 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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changeset
|
3526 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
3527 else: |
|
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diff
changeset
|
3528 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
3529 |
|
0401ef51f5c1
test_reconstruct_json
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diff
changeset
|
3530 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3531 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3532 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3533 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3534 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3535 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3536 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3537 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3538 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3539 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3540 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3541 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3542 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3543 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3544 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3545 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3546 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3547 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3548 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3549 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3550 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3551 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3552 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3553 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3554 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3555 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3556 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3557 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3558 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3559 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3560 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3561 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3562 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3563 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3564 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3565 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3566 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3567 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3568 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3569 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3570 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3571 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3572 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3573 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3574 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3575 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3576 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3577 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3578 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3579 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3580 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3581 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3582 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3583 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3584 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3585 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3586 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3587 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3588 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3589 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3590 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3591 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3592 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3593 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3594 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3595 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3596 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3597 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3598 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3599 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3600 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3601 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3602 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3603 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3604 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3605 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3606 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3607 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3608 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3609 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3610 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3611 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3612 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3613 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3614 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3615 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3616 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3617 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3618 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3619 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3620 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3621 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3622 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3623 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3624 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3625 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3626 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3627 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3628 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3629 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3630 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3631 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3632 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3633 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3634 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3635 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3636 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3637 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3638 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3639 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3640 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3641 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3642 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3643 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3644 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3645 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3646 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3647 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3648 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3649 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3650 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3651 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3652 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3653 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3654 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3655 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3656 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3657 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3658 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3659 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3660 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3661 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3662 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3663 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3664 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3665 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3666 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3667 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3668 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3669 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3670 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3671 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3672 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3673 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3674 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3675 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3676 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3677 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3678 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3679 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3680 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3681 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3682 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3683 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3684 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3685 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3686 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3687 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3688 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3689 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3690 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3691 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3692 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3693 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3694 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3695 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3696 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3697 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3698 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3699 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3700 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3701 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3702 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3703 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3704 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3705 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3706 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3707 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3708 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3709 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3710 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3711 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3712 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3713 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3714 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3715 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3716 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3717 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3718 }, |
| 119 | 3719 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3720 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3721 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3722 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3723 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3724 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3725 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3726 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3727 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3728 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3729 b = instances[0] if instances[1] == a else instances[1] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3730 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3731 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3732 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3733 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3734 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3735 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3736 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3737 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3738 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {}) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3739 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3740 CompareMainDicomTag('hello', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3741 CompareMainDicomTag('world', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3742 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
| 102 | 3743 |
| 104 | 3744 def test_httpClient_lua(self): |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3745 retries = 3 |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3746 result = '' |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3747 |
| 104 | 3748 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3749 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3750 while retries > 0 and not ('OK' in result): |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3751 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua') |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3752 retries -= 1 |
| 102 | 3753 |
| 3754 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3755 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3756 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3757 def test_bitbucket_issue_44(self): |
| 319 | 3758 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3759 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3760 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3761 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3762 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3763 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3764 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3765 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3766 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3767 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3768 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3769 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3770 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3771 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3772 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3773 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3774 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3775 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3776 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3777 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3778 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3779 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3780 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3781 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3782 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3783 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3784 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3785 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3786 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3787 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3788 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3789 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3790 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3791 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3792 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3793 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3794 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3795 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3796 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3797 def test_bitbucket_issue_42(self): |
| 319 | 3798 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3799 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3800 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3801 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3802 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3803 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3804 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3805 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3806 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3807 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3808 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3809 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3810 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3811 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3812 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3813 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3814 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3815 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3816 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3817 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3818 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3819 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3820 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3821 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3822 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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112
diff
changeset
|
3823 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3824 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3825 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3826 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3827 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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diff
changeset
|
3828 'Limit' : 4 }) |
|
3e5934363e76
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diff
changeset
|
3829 self.assertEqual(4, len(a)) |
|
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3830 |
|
3e5934363e76
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112
diff
changeset
|
3831 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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test_rest_find_limitµ
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diff
changeset
|
3832 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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diff
changeset
|
3833 'Since' : 2, |
|
3e5934363e76
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diff
changeset
|
3834 'Limit' : 4 }) |
|
3e5934363e76
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diff
changeset
|
3835 self.assertEqual(2, len(a)) |
|
3e5934363e76
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112
diff
changeset
|
3836 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3837 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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diff
changeset
|
3838 'Query' : { 'PatientName' : 'B*' }, |
|
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diff
changeset
|
3839 'Limit' : 3 }) |
|
3e5934363e76
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diff
changeset
|
3840 self.assertEqual(3, len(a)) |
|
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diff
changeset
|
3841 |
|
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diff
changeset
|
3842 b = [] |
|
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diff
changeset
|
3843 for i in range(4): |
|
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diff
changeset
|
3844 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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diff
changeset
|
3845 'Query' : { 'PatientName' : 'B*' }, |
|
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diff
changeset
|
3846 'Limit' : 1, |
|
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diff
changeset
|
3847 'Since' : i }) |
|
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diff
changeset
|
3848 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3849 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3850 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3851 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3852 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3853 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3854 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3855 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3856 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3857 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3858 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3859 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3860 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3861 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3862 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3863 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3864 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3865 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3866 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3867 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3868 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3869 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3870 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3871 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3872 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3873 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3874 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3875 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3876 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3877 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3878 # "PHI remaining after anonymization" |
| 319 | 3879 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
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test_bitbucket_issue_46
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113
diff
changeset
|
3880 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3881 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3882 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3883 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3884 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3885 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3886 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3887 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3888 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3889 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3890 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3891 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3892 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3893 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3894 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3895 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3896 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3897 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3898 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3899 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3900 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3901 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3902 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3903 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3904 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3905 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3906 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3907 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3908 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3909 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3910 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3911 self.assertFalse('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3912 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3913 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3914 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3915 t[value['Name']] = value['Value'] |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3916 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3917 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3918 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3919 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3920 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3921 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3922 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3923 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3924 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3925 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3926 f.flush() |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3927 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3928 stderr = subprocess.STDOUT).split('\n') |
|
118
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test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3929 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3930 |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
117
diff
changeset
|
3931 def test_bitbucket_issue_55(self): |
|
a954c535fef6
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diff
changeset
|
3932 def Run(modify, query): |
|
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diff
changeset
|
3933 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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test_bitbucket_issue_55
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diff
changeset
|
3934 |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3935 operation = 'modify' if modify else 'anonymize' |
|
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test_bitbucket_issue_55
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diff
changeset
|
3936 |
|
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test_bitbucket_issue_55
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diff
changeset
|
3937 self.assertRaises(Exception, lambda: DoPost( |
|
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test_bitbucket_issue_55
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diff
changeset
|
3938 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
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test_bitbucket_issue_55
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diff
changeset
|
3939 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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test_bitbucket_issue_55
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diff
changeset
|
3940 |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3941 query["Force"] = True |
|
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diff
changeset
|
3942 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
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diff
changeset
|
3943 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
3944 DoDelete(_REMOTE, a) |
|
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diff
changeset
|
3945 |
|
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diff
changeset
|
3946 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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changeset
|
3947 |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3948 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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diff
changeset
|
3949 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
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changeset
|
3950 |
|
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diff
changeset
|
3951 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
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diff
changeset
|
3952 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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diff
changeset
|
3953 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
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diff
changeset
|
3954 |
|
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diff
changeset
|
3955 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3956 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3957 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3958 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3959 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3960 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3961 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3962 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3963 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3964 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3965 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3966 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3967 # is set to "false" (default value). |
| 319 | 3968 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3969 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3970 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3971 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3972 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3973 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3974 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3975 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3976 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3977 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3978 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3979 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3980 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3981 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3982 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3983 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3984 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3985 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3986 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3987 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3988 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3989 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3990 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3991 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3992 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3993 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3994 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3995 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3996 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3997 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3998 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3999 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4000 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4001 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4002 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4003 |
| 125 | 4004 |
| 4005 def test_gbk_alias(self): | |
| 4006 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4007 # This test fails on Orthanc <= 1.3.0 | |
| 4008 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4009 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4010 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4011 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4012 |
| 4013 | |
| 4014 def test_long_tag(self): | |
| 4015 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4016 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4017 | |
| 4018 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4019 self.assertTrue('0018,1020' in tags) | |
| 4020 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4021 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4022 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4023 | |
| 4024 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4025 self.assertTrue('0018,1020' in tags) | |
| 4026 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4027 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4028 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4029 | |
| 4030 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4031 self.assertTrue('SoftwareVersions' in tags) | |
| 4032 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4033 self.assertTrue('HeartRate' in tags) | |
| 4034 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4035 | |
| 4036 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4037 self.assertTrue('SoftwareVersions' in tags) | |
| 4038 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4039 | |
| 4040 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4041 self.assertTrue('SoftwareVersions' in tags) | |
| 4042 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4043 | |
| 4044 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4045 self.assertTrue('SoftwareVersions' in tags) | |
| 4046 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4047 | |
| 4048 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4049 self.assertEqual(1, len(tags)) | |
| 4050 self.assertTrue(i in tags.keys()) | |
| 4051 self.assertTrue('0018,1020' in tags[i]) | |
| 4052 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4053 | |
| 4054 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4055 self.assertEqual(1, len(tags)) | |
| 4056 self.assertTrue(i in tags.keys()) | |
| 4057 self.assertTrue('0018,1020' in tags[i]) | |
| 4058 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4059 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4060 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4061 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4062 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4063 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4064 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4065 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4066 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4067 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4068 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4069 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4070 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4071 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4072 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4073 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4074 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4075 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4076 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4077 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4078 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4079 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4080 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4081 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4082 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4083 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4084 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4085 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4086 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4087 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4088 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4089 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4090 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4091 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4092 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4093 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4094 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4095 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4096 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4097 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4098 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4099 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4100 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4101 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4102 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4103 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4104 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4105 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4106 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4107 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4108 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4109 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4110 self.assertEqual(2, len(a)) |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4111 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4112 a2 = a[1]['ID'] |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4113 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4114 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4115 self.assertEqual(2, len(b)) |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4116 b1 = b[0]['ID'] |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4117 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4118 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4119 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4120 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4121 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4122 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4123 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4124 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4125 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4126 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4127 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4128 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4129 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4130 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4131 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4132 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4133 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4134 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4135 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4136 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4137 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4138 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4139 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4140 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4141 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4142 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4143 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4144 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4145 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4146 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4147 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4148 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4149 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4150 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4151 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4152 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4153 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4154 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4155 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4156 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4157 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4158 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4159 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4160 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4161 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4162 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4163 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4164 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4165 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4166 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4167 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4168 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4169 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4170 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4171 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4172 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4173 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4174 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4175 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4176 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4177 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4178 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4179 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4180 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4181 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4182 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4183 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4184 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4185 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4186 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4187 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4188 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4189 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4190 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4191 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4192 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4193 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4194 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4195 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4196 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4197 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4198 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4199 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4200 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4201 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4202 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4203 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4204 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4205 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4206 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4207 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4208 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4209 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4210 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4211 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4212 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4213 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4214 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4215 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4216 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4217 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4218 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4219 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4220 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4221 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4222 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4223 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4224 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4225 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4226 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4227 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4228 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4229 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4230 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4231 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4232 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4233 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4234 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4235 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4236 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4237 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4238 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4239 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4240 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4241 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4242 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4243 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4244 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4245 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4246 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4247 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4248 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4249 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4250 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4251 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4252 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4253 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4254 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4255 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4256 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4257 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4258 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4259 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4260 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4261 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4262 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4263 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4264 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4265 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4266 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4267 self.assertEqual(1, len(b)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4268 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4269 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4270 self.assertEqual(1, len(c)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4271 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4272 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4273 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4274 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4275 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4276 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4277 # Upload using the REST API |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4278 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4279 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4280 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4281 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4282 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4283 |
| 4284 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4285 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4286 | |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4287 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4288 self.assertEqual('RestApi', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4289 self.assertEqual('', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4290 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4291 self.assertFalse('CalledAET' in m) |
| 315 | 4292 self.assertTrue('HttpUsername' in m) |
| 4293 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4294 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4295 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4296 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4297 self.assertEqual('1', m['IndexInSeries']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4298 self.assertTrue('ReceptionDate' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4299 |
|
143
28d50ffac07d
test_metadata_origin
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4300 DoDelete(_REMOTE, '/instances/%s' % i) |
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4301 |
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4302 # Upload using the DICOM protocol |
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4303 subprocess.check_call([ FindExecutable('storescu'), |
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4304 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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4305 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
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4306 '-xw' ]) # Propose JPEG2000 |
|
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4307 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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4308 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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4309 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4310 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
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4311 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
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4312 |
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4313 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4314 self.assertEqual('DicomProtocol', m['Origin']) |
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4315 self.assertEqual('STORESCU', m['RemoteAET']) |
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4316 self.assertNotEqual('', m['RemoteIP']) |
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4317 self.assertEqual('ANY-SCP', m['CalledAET']) |
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4318 self.assertFalse('HttpUsername' in m) |
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4319 |
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4320 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4321 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4322 self.assertEqual('1', m['IndexInSeries']) |
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|
4323 self.assertTrue('ReceptionDate' in m) |
| 147 | 4324 |
| 4325 | |
| 4326 def test_lua_deadlock(self): | |
| 4327 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4328 # is with the lua script I'm using for conversion of images to | |
| 4329 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4330 # instance appears to be stored and then everything just | |
| 4331 # halts, ie Orthanc wont respond to anything after that." | |
| 4332 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4333 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4334 |
| 4335 subprocess.check_call([ FindExecutable('storescu'), | |
| 4336 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4337 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4338 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4339 ]) | |
| 4340 | |
| 4341 instances = DoGet(_REMOTE, '/instances') | |
| 4342 self.assertEqual(2, len(instances)) | |
| 4343 | |
| 4344 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4345 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4346 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4347 self.assertEqual(t1, t2); |
|
154
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4348 |
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|
4349 |
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4350 def test_find_group_length(self): |
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4351 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
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4352 # one of the Generic Group Length tags (*, 0x0000) |
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4353 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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4354 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
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4355 self.assertFalse('UnableToProcess' in result) |
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4356 self.assertFalse('E:' in result) |
|
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4357 |
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4358 |
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|
4359 def test_split(self): |
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4360 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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4361 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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|
4362 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4363 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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4364 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4365 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4366 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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4367 |
|
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|
4368 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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|
4369 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4370 |
|
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|
4371 info = DoGet(_REMOTE, '/studies/%s' % study) |
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|
4372 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4373 |
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changeset
|
4374 job = MonitorJob2(_REMOTE, lambda: DoPost |
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diff
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|
4375 (_REMOTE, '/studies/%s/split' % study, { |
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changeset
|
4376 'Series' : [ t2 ], |
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|
4377 'Replace' : { 'PatientName' : 'Hello' }, |
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changeset
|
4378 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4379 'KeepSource' : False, |
| 4380 'Asynchronous' : True | |
|
179
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|
4381 })) |
|
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diff
changeset
|
4382 |
|
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diff
changeset
|
4383 self.assertNotEqual(None, job) |
|
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diff
changeset
|
4384 |
|
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diff
changeset
|
4385 studies = set(DoGet(_REMOTE, '/studies')) |
|
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changeset
|
4386 self.assertEqual(2, len(studies)) |
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changeset
|
4387 |
|
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diff
changeset
|
4388 series = set(DoGet(_REMOTE, '/series')) |
|
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|
4389 self.assertEqual(2, len(series)) |
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|
4390 self.assertTrue(t1 in series) |
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|
4391 |
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diff
changeset
|
4392 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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diff
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|
4393 self.assertTrue(study in studies) |
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diff
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|
4394 self.assertTrue(study2 in studies) |
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diff
changeset
|
4395 |
|
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diff
changeset
|
4396 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4397 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4398 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4399 |
|
254
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diff
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|
4400 sopInstanceUids = set() |
|
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|
4401 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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|
4402 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
|
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|
4403 |
|
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|
4404 self.assertTrue(knee1Sop in sopInstanceUids) |
|
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|
4405 |
|
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|
4406 # Fails if Orthanc <= 1.5.7 |
|
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|
4407 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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|
4408 |
|
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|
4409 # One original instance is kept, another one is added because of the split |
|
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|
4410 self.assertEqual(2, len(sopInstanceUids)) |
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4411 |
|
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4412 |
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|
4413 def test_merge(self): |
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|
4414 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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|
4415 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
4416 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4417 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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|
4418 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4419 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
4420 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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|
4421 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
|
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4422 |
|
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4423 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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|
4424 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4425 |
|
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|
4426 job = MonitorJob2(_REMOTE, lambda: DoPost |
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diff
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|
4427 (_REMOTE, '/studies/%s/merge' % knee, { |
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diff
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|
4428 'Resources' : [ brainix ], |
| 181 | 4429 'KeepSource' : True, |
| 4430 'Synchronous' : False | |
|
179
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diff
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|
4431 })) |
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|
4432 |
|
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|
4433 self.assertNotEqual(None, job) |
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|
4434 |
|
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changeset
|
4435 studies = set(DoGet(_REMOTE, '/studies')) |
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diff
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|
4436 self.assertEqual(2, len(studies)) |
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diff
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|
4437 self.assertTrue(knee in studies) |
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diff
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|
4438 self.assertTrue(brainix in studies) |
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|
4439 |
|
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changeset
|
4440 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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diff
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|
4441 self.assertTrue(t1 in series) |
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|
4442 series.remove(t1) |
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|
4443 self.assertEqual(1, len(series)) |
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|
4444 |
|
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changeset
|
4445 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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changeset
|
4446 self.assertEqual(1, len(instances)) |
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|
4447 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4448 |
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changeset
|
4449 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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|
4450 self.assertEqual(1, len(instances)) |
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|
4451 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4452 |
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changeset
|
4453 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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changeset
|
4454 self.assertEqual(1, len(instances)) |
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diff
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|
4455 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4456 |
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|
4457 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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|
4458 |
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|
4459 for key in tags['PatientMainDicomTags']: |
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|
4460 self.assertEqual(a[key], merged[key]) |
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|
4461 if (key in b and key != 'PatientSex'): |
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changeset
|
4462 self.assertNotEqual(a[key], b[key]) |
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|
4463 |
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|
4464 for key in tags['MainDicomTags']: |
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|
4465 # Not in the patient/study module |
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|
4466 if (not key in [ 'InstitutionName', |
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|
4467 'RequestingPhysician', |
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|
4468 'RequestedProcedureDescription', ]): |
|
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diff
changeset
|
4469 self.assertEqual(a[key], merged[key]) |
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changeset
|
4470 if (key in b): |
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changeset
|
4471 self.assertNotEqual(a[key], b[key]) |
|
254
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changeset
|
4472 |
|
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changeset
|
4473 sopInstanceUids = set() |
|
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|
4474 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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|
4475 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
|
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changeset
|
4476 |
|
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changeset
|
4477 self.assertTrue(kneeSop in sopInstanceUids) |
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changeset
|
4478 self.assertTrue(brainixSop in sopInstanceUids) |
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changeset
|
4479 |
|
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diff
changeset
|
4480 # Fails if Orthanc <= 1.5.7 |
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changeset
|
4481 # The 2 original instances are kept, another one is added because of the merge |
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|
4482 self.assertEqual(3, len(sopInstanceUids)) |
|
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|
4483 |
| 187 | 4484 |
| 4485 def test_async_archive(self): | |
| 4486 # Testing the asynchronous generation of archives/medias (new | |
| 4487 # in Orthanc 1.4.3) | |
| 4488 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4489 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4490 | |
| 4491 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4492 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4493 | |
| 4494 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 4495 (_REMOTE, '/studies/%s/archive' % kneeT1, { | |
| 4496 'Synchronous' : False | |
| 4497 })) | |
| 4498 | |
| 4499 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4500 self.assertEqual(1, len(z.namelist())) | |
| 4501 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4502 | |
|
354
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diff
changeset
|
4503 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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diff
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|
4504 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4505 self.assertEqual(1, info['Content']['InstancesCount']) |
|
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changeset
|
4506 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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changeset
|
4507 |
| 187 | 4508 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 4509 (_REMOTE, '/studies/%s/media' % kneeT1, { | |
| 4510 'Synchronous' : False | |
| 4511 })) | |
| 4512 | |
| 4513 # The archive from the first job has been replaced by the | |
| 4514 # archive from second job (as MediaArchiveSize == 1) | |
| 4515 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4516 | |
| 4517 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4518 self.assertEqual(2, len(z.namelist())) | |
| 4519 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4520 | |
|
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changeset
|
4521 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4522 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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diff
changeset
|
4523 self.assertEqual(1, info['Content']['InstancesCount']) |
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changeset
|
4524 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4525 |
| 187 | 4526 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4527 (_REMOTE, '/tools/create-archive', { | |
| 4528 'Synchronous' : False, | |
| 4529 'Resources' : [ kneeT1, kneeT2 ], | |
| 4530 })) | |
| 4531 | |
| 4532 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4533 self.assertEqual(2, len(z.namelist())) | |
| 4534 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4535 | |
|
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changeset
|
4536 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4537 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4538 self.assertEqual(2, info['Content']['InstancesCount']) |
|
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changeset
|
4539 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4540 |
| 187 | 4541 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4542 (_REMOTE, '/tools/create-media', { | |
| 4543 'Synchronous' : False, | |
| 4544 'Resources' : [ kneeT1, kneeT2 ], | |
| 4545 })) | |
| 4546 | |
| 4547 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4548 self.assertEqual(3, len(z.namelist())) | |
| 4549 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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|
4550 |
|
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|
4551 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4552 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4553 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4554 |
| 187 | 4555 |
|
188
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|
4556 def test_queries_hierarchy(self): |
|
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|
4557 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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|
4558 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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|
4559 |
|
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|
4560 tags = { |
|
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|
4561 'NumberOfPatientRelatedInstances' : '', |
|
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|
4562 'NumberOfPatientRelatedSeries' : '', |
|
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|
4563 'NumberOfPatientRelatedStudies' : '', |
|
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|
4564 'NumberOfStudyRelatedInstances' : '', |
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changeset
|
4565 'NumberOfStudyRelatedSeries' : '', |
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|
4566 'NumberOfSeriesRelatedInstances' : '', |
|
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|
4567 } |
|
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|
4568 |
|
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|
4569 tags2 = copy.copy(tags) |
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changeset
|
4570 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
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|
4571 |
|
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diff
changeset
|
4572 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
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changeset
|
4573 'Level' : 'Patient', |
|
189
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changeset
|
4574 'Query' : tags2 |
|
188
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diff
changeset
|
4575 }) ['ID'] |
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diff
changeset
|
4576 |
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diff
changeset
|
4577 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
4578 'Level' : 'Study', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4579 'Query' : tags2 |
|
188
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diff
changeset
|
4580 }) ['ID'] |
|
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diff
changeset
|
4581 |
|
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diff
changeset
|
4582 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
changeset
|
4583 'Level' : 'Series', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4584 'Query' : tags2 |
|
188
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diff
changeset
|
4585 }) ['ID'] |
|
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diff
changeset
|
4586 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4587 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4588 'Level' : 'Instance', |
|
189
11719f19bd62
test_dicom_disk_size
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parents:
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diff
changeset
|
4589 'Query' : tags2 |
|
188
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diff
changeset
|
4590 }) ['ID'] |
|
7d585263808b
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diff
changeset
|
4591 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4592 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
|
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diff
changeset
|
4593 self.assertEqual(1, len(p)) |
|
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diff
changeset
|
4594 self.assertEqual('887', p[0]['PatientID']) |
|
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diff
changeset
|
4595 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4596 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
|
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diff
changeset
|
4597 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4598 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4599 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
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diff
changeset
|
4600 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
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diff
changeset
|
4601 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4602 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4603 self.assertEqual(1, len(p)) |
|
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changeset
|
4604 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
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diff
changeset
|
4605 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4606 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4607 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4608 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4609 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4610 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4611 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4612 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4613 self.assertEqual(1, len(p)) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4614 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4615 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
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diff
changeset
|
4616 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4617 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4618 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4619 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4620 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4621 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4622 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4623 self.assertEqual(1, len(p)) |
|
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diff
changeset
|
4624 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
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new test: test_queries_hierarchy
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187
diff
changeset
|
4625 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4626 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4627 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4628 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4629 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4630 |
|
188
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new test: test_queries_hierarchy
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187
diff
changeset
|
4631 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4632 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4633 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4634 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4635 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4636 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4637 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4638 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4639 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4640 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4641 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4642 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4643 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4644 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4645 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4646 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4647 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4648 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4649 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
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diff
changeset
|
4650 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4651 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
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diff
changeset
|
4652 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4653 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4654 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4655 |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4656 |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4657 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
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|
4658 dicomSize = 0 |
|
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diff
changeset
|
4659 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4660 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4661 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
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test_dicom_disk_size
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diff
changeset
|
4662 |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4663 for i in range(2): |
|
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test_dicom_disk_size
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diff
changeset
|
4664 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
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diff
changeset
|
4665 UploadInstance(_REMOTE, p) |
|
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test_dicom_disk_size
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diff
changeset
|
4666 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4667 |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4668 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4669 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4670 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4671 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4672 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4673 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4674 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4675 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4676 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4677 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4678 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4679 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4680 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4681 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4682 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4683 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4684 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4685 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4686 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4687 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4688 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4689 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4690 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4691 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4692 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4693 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4694 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4695 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4696 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4697 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4698 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4699 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4700 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4701 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4702 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4703 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4704 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4705 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4706 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4707 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4708 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4709 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4710 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4711 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4712 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4713 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4714 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4715 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4716 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4717 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4718 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4719 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4720 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4721 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4722 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4723 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4724 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4725 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4726 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4727 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4728 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4729 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4730 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4731 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4732 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4733 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4734 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4735 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4736 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4737 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4738 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4739 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4740 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4741 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4742 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4743 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4744 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4745 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4746 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4747 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4748 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4749 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4750 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4751 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4752 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4753 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4754 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4755 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4756 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4757 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4758 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4759 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4760 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4761 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4762 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4763 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4764 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4765 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4766 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4767 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4768 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4769 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
4770 DoDelete(_REMOTE, '/instances/%s' % a) |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4771 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4772 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4773 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4774 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4775 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
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parents:
384
diff
changeset
|
4776 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4777 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4778 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
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diff
changeset
|
4779 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4780 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
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diff
changeset
|
4781 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4782 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4783 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4784 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4785 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
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parents:
384
diff
changeset
|
4786 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4787 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4788 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4789 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4790 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4791 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4792 z = GetArchive(_REMOTE, '/patients/%s/media' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4793 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4794 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4795 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4796 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4797 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4798 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4799 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4800 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4801 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4802 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4803 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4804 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4805 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4806 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4807 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4808 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4809 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4810 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4811 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4812 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4813 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4814 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4815 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4816 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4817 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4818 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4819 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4820 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4821 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4822 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4823 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4824 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4825 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4826 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4827 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4828 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4829 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
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diff
changeset
|
4830 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4831 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4832 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4833 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
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208
diff
changeset
|
4834 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
4835 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
4836 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4837 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4838 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4839 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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208
diff
changeset
|
4840 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4841 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
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diff
changeset
|
4842 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4843 self.assertEqual(0, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4844 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
4845 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
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208
diff
changeset
|
4846 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4847 self.assertEqual(1, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4848 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
4849 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4850 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
4851 self.assertEqual(1, len(a)) |
| 211 | 4852 |
| 4853 | |
| 4854 def test_series_status(self): | |
| 4855 def HasCompletedInChanges(): | |
| 4856 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 4857 if c['ChangeType'] == 'CompletedSeries': | |
| 4858 return True; | |
| 4859 | |
| 4860 return False | |
| 4861 | |
| 4862 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 4863 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 4864 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4865 self.assertFalse(HasCompletedInChanges()) | |
| 4866 | |
| 4867 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 4868 | |
| 4869 for i in range(3): | |
| 4870 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 4871 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4872 self.assertFalse(HasCompletedInChanges()) | |
| 4873 | |
| 4874 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 4875 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4876 self.assertTrue(HasCompletedInChanges()) | |
| 4877 | |
| 4878 DoDelete(_REMOTE, '/changes') | |
| 4879 self.assertFalse(HasCompletedInChanges()) | |
| 4880 | |
| 4881 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 4882 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4883 self.assertFalse(HasCompletedInChanges()) | |
| 4884 | |
| 215 | 4885 |
| 4886 def test_dicomweb(self): | |
| 4887 def Compare(dicom, reference): | |
| 4888 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4889 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 4890 headers = { 'Accept' : 'application/dicom+json' }) | |
| 4891 with open(GetDatabasePath(reference), 'rb') as c: | |
| 4892 d = json.load(c) | |
| 220 | 4893 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 4894 |
| 4895 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 4896 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 4897 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 4898 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 4899 |
| 4900 | |
| 4901 def test_issue_95_encodings(self): | |
| 319 | 4902 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 4903 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 4904 | |
| 4905 # Very useful tool: "file2" from package "file-kanji" | |
| 4906 | |
| 4907 def GetPatientName(dicom): | |
| 4908 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4909 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4910 return j['PatientName'] | |
| 4911 | |
| 4912 def ComparePatientName(name, dicom): | |
| 4913 self.assertEqual(name, GetPatientName(dicom)) | |
| 4914 | |
| 4915 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4916 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 4917 | |
| 4918 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 4919 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 4920 | |
| 4921 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 4922 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 4923 | |
| 4924 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 4925 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 4926 | |
| 4927 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 4928 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 4929 | |
| 4930 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4931 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 4932 | |
| 4933 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 4934 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 4935 | |
| 4936 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 4937 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 4938 | |
| 4939 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 4940 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 4941 # Linux console into Emacs automatically reverse the string | |
| 4942 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 4943 | |
| 4944 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 4945 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 4946 # characters by default, but copy/paste works with Emacs | |
| 4947 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 4948 | |
| 4949 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 4950 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 4951 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 4952 # remainer. Orthanc only takes into consideration the first | |
| 4953 # codepage: This is a limitation. | |
| 4954 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 4955 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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4956 |
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4957 |
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4958 def test_findscu_missing_tags(self): |
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4959 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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4960 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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4961 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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4962 |
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4963 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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4964 |
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4965 # We have 2 instances... |
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4966 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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4967 self.assertEqual(2, len(patientNames)) |
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4968 self.assertEqual('KNIX', patientNames[0]) |
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4969 self.assertEqual('KNIX', patientNames[1]) |
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4970 |
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4971 # ...but only 1 value for the "Rows" tag |
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4972 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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4973 self.assertEqual(1, len(rows)) |
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4974 self.assertEqual('512', rows[0]) |
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4975 |
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4976 |
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4977 |
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4978 def test_bitbucket_issue_131(self): |
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4979 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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4980 # StudyInstanceUID in it's database." |
| 319 | 4981 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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4982 |
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4983 # Insert 2 instances, with the same StudyInstanceUID, but with |
|
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4984 # different patient IDs. Orthanc will create 2 distincts |
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4985 # patients, and the hierarchy of resources above the two |
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4986 # instances will be fully disjoint. |
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4987 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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4988 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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4989 |
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4990 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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4991 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4992 |
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4993 a = DoPost(_REMOTE, '/modalities/self/query', { |
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4994 'Level' : 'Study', |
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4995 'Query' : {"PatientID": "A" }})['ID'] |
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4996 |
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4997 # 1 study is matched |
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4998 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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|
4999 |
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|
5000 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5001 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5002 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5003 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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|
5004 |
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|
5005 # The two studies are matched, as we made the request at the |
|
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5006 # Study level, thus the shared StudyInstanceUID is used as the key |
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5007 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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|
5008 |
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|
5009 |
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|
5010 # Match the 2 studies |
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|
5011 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5012 'Level' : 'Study', |
|
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|
5013 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
|
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|
5014 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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|
5015 DropOrthanc(_LOCAL) |
|
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|
5016 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5017 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5018 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5019 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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|
5020 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5021 |
|
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|
5022 |
|
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|
5023 # Same test, at the patient level => only 1 instance is transfered |
|
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|
5024 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
5025 'Level' : 'Patient', |
|
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|
5026 'Query' : {"PatientID": "A" }})['ID'] |
|
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|
5027 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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|
5028 DropOrthanc(_LOCAL) |
|
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|
5029 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5030 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5031 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5032 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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|
5033 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5034 |
|
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|
5035 |
|
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|
5036 # Same test, at the series level => only 1 instance is transfered |
|
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|
5037 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5038 'Level' : 'Series', |
|
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|
5039 'Query' : {"PatientID": "A" }})['ID'] |
|
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|
5040 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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|
5041 DropOrthanc(_LOCAL) |
|
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|
5042 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5043 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5044 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5045 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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|
5046 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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5047 |
|
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5048 |
|
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|
5049 def test_bitbucket_issue_136(self): |
|
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|
5050 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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|
5051 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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|
5052 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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|
5053 self.assertEqual(1, len(patientNames)) |
|
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|
5054 self.assertEqual('John Doe', patientNames[0]) |
|
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5055 |
|
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5056 |
|
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5057 def test_anonymize_relationships_4(self): |
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5058 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
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5059 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
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5060 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
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5061 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
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5062 |
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5063 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
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5064 'application/json')['ID'] |
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5065 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
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5066 self.assertEqual(2, len(series)) |
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5067 |
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5068 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
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5069 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
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5070 self.assertEqual(1, len(cr)) |
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5071 self.assertEqual(1, len(pr)) |
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5072 self.assertEqual(1, len(cr[0]['Instances'])) |
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5073 self.assertEqual(1, len(pr[0]['Instances'])) |
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5074 |
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5075 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
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5076 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
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5077 |
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5078 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
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5079 crinstance['MainDicomTags']['SOPInstanceUID']) |
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5080 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
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5081 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
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5082 |
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5083 # This fails on Orthanc <= 1.5.6 |
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5084 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
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5085 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
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5086 |
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5087 |
|
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5088 def test_anonymize_relationships_5(self): |
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5089 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
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5090 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
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5091 oStudyId = ct1['ParentStudy'] |
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5092 oCtInstanceId = ct1['ID'] |
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5093 oRtInstanceId = rt1['ID'] |
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5094 |
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5095 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
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5096 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
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5097 |
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5098 # first validate the relationships in the source data |
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5099 oStudyUID = oCtTags['StudyInstanceUID'] |
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5100 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
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5101 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
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5102 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5103 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
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5104 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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5105 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
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5106 |
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5107 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5108 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
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5109 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
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5110 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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5111 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5112 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5113 |
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5114 ### anonymize |
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5115 |
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5116 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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5117 'application/json')['ID'] |
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5118 |
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5119 ### validate |
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5120 |
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5121 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
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5122 self.assertEqual(2, len(aSeries)) |
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5123 |
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5124 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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5125 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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5126 aCtInstanceId = aCt[0]['Instances'][0] |
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5127 aRtInstanceId = aRt[0]['Instances'][0] |
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5128 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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5129 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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5130 |
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5131 # now validate the relationships in the anonymized data |
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5132 aStudyUID = aCtTags['StudyInstanceUID'] |
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5133 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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5134 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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5135 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5136 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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5137 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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5138 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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5139 |
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5140 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5141 # make sure all UIDs have been updated |
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5142 self.assertNotEqual(oStudyUID, aStudyUID) |
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5143 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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5144 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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5145 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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5146 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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5147 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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5148 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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5149 |
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5150 # validate the relationships |
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5151 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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5152 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5153 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5154 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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5155 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5156 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5157 |
| 256 | 5158 def test_anonymize_relationships_5b(self): |
| 5159 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5160 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5161 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5162 oStudyId = ct1['ParentStudy'] | |
| 5163 oCtInstanceId = ct1['ID'] | |
| 5164 oRtInstanceId = rt1['ID'] | |
| 5165 | |
| 5166 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5167 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5168 | |
| 5169 ### anonymize while forcing the StudyInstanceUID | |
| 5170 | |
| 5171 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5172 'application/json')['ID'] | |
| 5173 | |
| 5174 ### validate | |
| 5175 | |
| 5176 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5177 self.assertEqual(2, len(aSeries)) | |
| 5178 | |
| 5179 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5180 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5181 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5182 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5183 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5184 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5185 | |
| 5186 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5187 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5188 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5189 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5190 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5191 def test_bitbucket_issue_140(self): |
| 266 | 5192 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5193 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5194 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5195 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5196 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5197 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5198 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5199 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5200 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5201 }, 'application/json') ['ID'] |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5202 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5203 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5204 self.assertEqual(1, len(instances)) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5205 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5206 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5207 t = tags['4321,1012'] |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5208 self.assertEqual('String', t['Type']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5209 self.assertEqual('RadioButton3', t['Name']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5210 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5211 self.assertEqual('jklmopq', t['Value']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5212 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5213 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5214 t = tags['4321,1012'] |
| 327 | 5215 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5216 self.assertEqual('RadioButton3', t['Name']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5217 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5218 self.assertEqual('aaabbbccc', t['Value']) |
|
236
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5219 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5220 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5221 def test_find_normalize(self): |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5222 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5223 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5224 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5225 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5226 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5227 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5228 'Query' : { 'Rows' : '42' } |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5229 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5230 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5231 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5232 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5233 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5234 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5235 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5236 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5237 'Query' : { 'Rows' : '42' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5238 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5239 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5240 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5241 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5242 self.assertEqual(0, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5243 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5244 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5245 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5246 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5247 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5248 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5249 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5250 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5251 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5252 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5253 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5254 |
| 5255 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5256 'Level' : 'Instance', | |
| 5257 'Query' : { 'Rows' : '' }, | |
| 5258 'Normalize' : False | |
| 5259 }) ['ID'] | |
| 5260 | |
| 5261 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5262 self.assertEqual(1, len(b)) | |
| 5263 self.assertTrue('Rows' in b[0]) | |
| 5264 self.assertEqual('512', b[0]['Rows']) | |
| 5265 | |
| 5266 self.assertRaises(Exception, lambda: DoPost( | |
| 5267 _REMOTE, '/modalities/self/query', { | |
| 5268 'Level' : 'Instance', | |
| 5269 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5270 'Normalize' : False | |
| 5271 })) | |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5272 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5273 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5274 def test_bitbucket_issue_141(self): |
| 319 | 5275 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5276 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5277 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5278 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5279 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5280 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5281 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5282 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5283 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5284 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5285 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5286 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5287 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5288 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5289 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5290 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5291 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5292 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5293 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5294 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5295 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5296 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5297 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5298 |
| 5299 | |
| 5300 def test_log_level(self): | |
| 319 | 5301 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5302 original = DoGet(_REMOTE, '/tools/log-level') |
| 5303 | |
| 5304 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5305 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5306 DoGet(_REMOTE, '/system') | |
| 5307 | |
| 5308 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5309 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5310 DoGet(_REMOTE, '/system') | |
| 5311 | |
| 5312 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5313 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5314 DoGet(_REMOTE, '/system') | |
| 5315 | |
| 5316 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5317 | |
| 5318 # Switch back to the original log level | |
| 5319 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5320 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5321 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5322 def test_upload_compressed(self): |
| 265 | 5323 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5324 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5325 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5326 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5327 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5328 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5329 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5330 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5331 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5332 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5333 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5334 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5335 |
| 5336 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5337 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5338 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5339 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5340 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5341 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5342 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5343 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5344 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5345 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5346 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5347 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5348 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5349 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5350 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5351 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5352 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5353 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5354 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5355 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5356 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5357 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5358 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5359 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5360 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5361 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5362 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5363 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5364 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5365 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5366 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5367 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5368 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5369 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5370 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5371 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5372 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5373 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5374 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5375 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5376 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5377 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5378 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5379 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5380 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5381 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5382 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5383 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5384 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5385 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5386 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5387 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5388 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5389 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5390 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5391 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5392 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5393 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5394 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5395 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5396 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5397 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5398 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5399 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5400 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5401 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5402 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5403 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5404 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5405 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5406 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5407 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5408 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5409 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5410 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5411 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5412 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5413 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5414 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5415 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5416 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5417 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5418 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5419 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5420 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5421 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5422 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5423 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5424 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5425 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5426 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5427 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5428 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5429 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5430 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5431 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5432 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5433 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5434 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5435 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5436 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5437 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5438 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5439 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5440 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5441 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5442 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5443 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5444 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5445 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5446 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5447 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5448 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5449 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5450 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5451 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5452 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5453 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5454 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5455 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5456 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5457 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5458 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5459 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5460 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5461 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5462 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5463 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5464 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5465 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5466 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5467 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5468 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5469 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5470 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5471 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5472 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5473 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5474 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5475 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5476 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5477 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5478 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5479 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5480 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5481 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5482 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5483 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5484 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5485 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5486 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5487 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5488 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5489 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5490 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5491 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5492 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5493 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5494 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5495 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5496 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5497 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5498 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5499 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5500 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5501 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5502 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5503 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5504 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5505 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5506 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5507 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5508 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5509 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5510 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5511 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5512 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5513 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5514 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5515 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5516 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5517 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5518 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5519 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5520 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5521 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5522 for level in [ 'Study', 'Series' ] : |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5523 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5524 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5525 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5526 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5527 'StudyInstanceUID' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5528 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5529 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5530 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5531 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5532 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5533 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5534 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5535 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5536 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5537 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5538 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5539 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5540 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5541 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5542 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5543 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5544 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5545 |
| 269 | 5546 # Wildcard matching is not allowed for this VR |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5547 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5548 self.assertRaises(Exception, lambda: CountAnswers({ |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5549 'Level' : level, |
|
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5550 'Query' : { |
| 269 | 5551 'StudyInstanceUID' : '*' |
|
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5552 }, |
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5553 'Normalize' : normalize, |
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5554 })) |
| 265 | 5555 |
| 5556 | |
| 5557 def test_rendered(self): | |
| 5558 # New in Orthanc 1.6.0 | |
| 5559 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5560 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5561 self.assertEqual("RGB", im.mode) | |
| 5562 self.assertEqual(41, im.size[0]) | |
| 5563 self.assertEqual(41, im.size[1]) | |
| 5564 | |
| 5565 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5566 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5567 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5568 | |
| 5569 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5570 self.assertEqual("RGB", im.mode) | |
| 5571 self.assertEqual(10, im.size[0]) | |
| 5572 self.assertEqual(10, im.size[1]) | |
| 5573 | |
| 5574 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5575 self.assertEqual("RGB", im.mode) | |
| 5576 self.assertEqual(10, im.size[0]) | |
| 5577 self.assertEqual(10, im.size[1]) | |
| 5578 | |
| 5579 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5580 self.assertEqual("RGB", im.mode) | |
| 5581 self.assertEqual(128, im.size[0]) | |
| 5582 self.assertEqual(128, im.size[1]) | |
| 5583 | |
| 5584 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5585 self.assertEqual("RGB", im.mode) | |
| 5586 self.assertEqual(10, im.size[0]) | |
| 5587 self.assertEqual(10, im.size[1]) | |
| 5588 | |
| 5589 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5590 self.assertEqual("RGB", im.mode) | |
| 5591 self.assertEqual(10, im.size[0]) | |
| 5592 self.assertEqual(10, im.size[1]) | |
| 5593 | |
| 5594 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5595 self.assertEqual("RGB", im.mode) | |
| 5596 self.assertEqual(5, im.size[0]) | |
| 5597 self.assertEqual(5, im.size[1]) | |
| 5598 | |
| 5599 | |
| 5600 # Grayscale image | |
| 5601 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5602 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5603 self.assertEqual("L", im.mode) | |
| 5604 self.assertEqual(288, im.size[0]) | |
| 5605 self.assertEqual(288, im.size[1]) | |
| 5606 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5607 | |
| 5608 # Those are the original windowing parameters that are written | |
| 5609 # inside the DICOM file | |
| 5610 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5611 self.assertEqual("L", im2.mode) | |
| 5612 self.assertEqual(288, im2.size[0]) | |
| 5613 self.assertEqual(288, im2.size[1]) | |
| 5614 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5615 | |
| 5616 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5617 self.assertEqual("L", im.mode) | |
| 5618 self.assertEqual(512, im.size[0]) | |
| 5619 self.assertEqual(512, im.size[1]) | |
| 5620 | |
| 5621 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5622 self.assertEqual("L", im.mode) | |
| 5623 self.assertEqual(10, im.size[0]) | |
| 5624 self.assertEqual(10, im.size[1]) | |
| 5625 | |
| 5626 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5627 self.assertEqual("L", im.mode) | |
| 5628 self.assertEqual(10, im.size[0]) | |
| 5629 self.assertEqual(10, im.size[1]) | |
| 5630 | |
| 5631 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5632 self.assertEqual("L", im.mode) | |
| 5633 self.assertEqual(1, im.size[0]) | |
| 5634 self.assertEqual(1, im.size[1]) | |
| 5635 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5636 | |
| 5637 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5638 self.assertEqual("L", im.mode) | |
| 5639 self.assertEqual(1, im.size[0]) | |
| 5640 self.assertEqual(1, im.size[1]) | |
| 5641 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5642 | |
| 5643 | |
| 5644 # Test monochrome 1 | |
| 5645 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5646 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5647 self.assertEqual("L", im.mode) | |
| 5648 self.assertEqual(2010, im.size[0]) | |
| 5649 self.assertEqual(2446, im.size[1]) | |
| 5650 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5651 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5652 self.assertEqual("L", im.mode) | |
| 5653 self.assertEqual(20, im.size[0]) | |
| 5654 self.assertEqual(24, im.size[1]) | |
| 5655 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5656 self.assertEqual("L", im.mode) | |
| 5657 self.assertEqual(20, im.size[0]) | |
| 5658 self.assertEqual(24, im.size[1]) | |
| 5659 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5660 self.assertEqual("L", im.mode) | |
| 5661 self.assertEqual(10, im.size[0]) | |
| 5662 self.assertEqual(12, im.size[1]) | |
| 5663 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5664 self.assertEqual("L", im.mode) | |
| 5665 self.assertEqual(20, im.size[0]) | |
| 5666 self.assertEqual(24, im.size[1]) | |
|
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5667 |
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5668 |
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5669 def test_bitbucket_issue_154(self): |
|
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5670 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5671 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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5672 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5673 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
|
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5674 |
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5675 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5676 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5677 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
|
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5678 |
|
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5679 # C-FIND is working on list of UIDs |
|
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5680 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
|
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5681 '-k', 'StudyInstanceUID=%s' % study, |
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5682 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5683 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
|
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5684 self.assertEqual(2, len(series)) |
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5685 self.assertTrue(series1 in series) |
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5686 self.assertTrue(series2 in series) |
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5687 |
|
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5688 # Individual retrieval is working in Orthanc < 1.6.0 |
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5689 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5690 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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5691 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5692 '-k', 'StudyInstanceUID=%s' % study, |
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5693 '-k', 'SeriesInstanceUID=%s' % series1, |
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5694 ]))) |
|
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5695 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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5696 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5697 '-k', 'StudyInstanceUID=%s' % study, |
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5698 '-k', 'SeriesInstanceUID=%s' % series2, |
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5699 ]))) |
|
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5700 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5701 |
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5702 DropOrthanc(_LOCAL) |
|
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5703 |
|
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|
5704 # But list matching is working only in Orthanc >= 1.6.0 |
|
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|
5705 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
5706 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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|
5707 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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|
5708 '-k', 'StudyInstanceUID=%s' % study, |
|
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|
5709 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
|
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5710 ]))) |
|
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5711 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5712 |
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|
5713 |
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5714 def test_storage_commitment_api(self): |
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5715 # Storage commitment is available since Orthanc 1.6.0 |
|
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5716 |
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5717 def WaitTransaction(uid): |
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5718 while True: |
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5719 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5720 if s['Status'] != 'Pending': |
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5721 return s |
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5722 else: |
|
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5723 time.sleep(0.01) |
|
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5724 |
| 281 | 5725 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5726 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5727 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5728 |
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5729 # Against self |
| 281 | 5730 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5731 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5732 }) ['ID'] | |
|
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5733 self.assertTrue(transaction.startswith('2.25.')) |
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5734 |
|
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5735 result = WaitTransaction(transaction) |
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5736 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5737 self.assertEqual('Success', result['Status']) |
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5738 self.assertEqual(1, len(result['Success'])) |
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5739 self.assertEqual(0, len(result['Failures'])) |
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5740 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5741 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5742 |
| 281 | 5743 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5744 "DicomInstances" : [ | |
| 5745 { 'SOPClassUID' : sopClassUid, | |
| 5746 'SOPInstanceUID' : sopInstanceUid }, | |
| 5747 ], | |
| 5748 }) | |
| 5749 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5750 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5751 | |
| 5752 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5753 "Resources" : [ | |
| 5754 instance['ID'], | |
| 5755 instance['ParentSeries'], | |
| 5756 instance['ParentStudy'], | |
| 5757 instance['ParentPatient'], | |
| 5758 ] | |
| 5759 }) | |
|
280
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|
5760 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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|
5761 self.assertEqual(result, WaitTransaction(transaction)) |
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|
5762 |
|
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|
5763 |
| 281 | 5764 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5765 "DicomInstances" : [ | |
| 5766 [ 'nope', 'nope2' ], | |
| 5767 [ sopClassUid, sopInstanceUid ], | |
| 5768 ], | |
| 5769 }) ['ID'] | |
|
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|
5770 self.assertTrue(transaction.startswith('2.25.')) |
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|
5771 |
|
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|
5772 result = WaitTransaction(transaction) |
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|
5773 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5774 self.assertEqual('Failure', result['Status']) |
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|
5775 self.assertEqual(1, len(result['Success'])) |
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|
5776 self.assertEqual(1, len(result['Failures'])) |
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|
5777 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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|
5778 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5779 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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|
5780 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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|
5781 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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|
5782 |
|
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|
5783 # Cannot remove items from a failed storage commitment transaction |
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|
5784 self.assertRaises(Exception, lambda: |
|
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|
5785 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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|
5786 |
|
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|
5787 |
|
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|
5788 # Against Orthanc 0.8.6, that does not support storage commitment |
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changeset
|
5789 self.assertRaises(Exception, lambda: |
| 281 | 5790 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
| 5791 "DicomInstances" : [ | |
| 5792 [ sopClassUid, sopInstanceUid ], | |
| 5793 ] | |
| 5794 })) | |
|
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|
5795 |
|
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diff
changeset
|
5796 |
|
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diff
changeset
|
5797 |
|
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changeset
|
5798 def test_storage_commitment_store(self): |
|
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|
5799 # Storage commitment is available since Orthanc 1.6.0 |
|
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|
5800 |
|
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changeset
|
5801 def WaitTransaction(uid): |
|
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|
5802 while True: |
|
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|
5803 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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|
5804 if s['Status'] != 'Pending': |
|
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diff
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|
5805 return s |
|
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diff
changeset
|
5806 else: |
|
342
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|
5807 time.sleep(0.01) |
|
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|
5808 |
|
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|
5809 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
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changeset
|
5810 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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changeset
|
5811 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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changeset
|
5812 |
|
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changeset
|
5813 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
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|
5814 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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diff
changeset
|
5815 'Resources' : [ i ], |
|
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|
5816 'StorageCommitment' : True, |
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|
5817 })) |
|
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changeset
|
5818 |
|
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changeset
|
5819 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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|
5820 'Resources' : [ i ], |
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|
5821 'StorageCommitment' : False, |
|
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changeset
|
5822 }) |
|
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changeset
|
5823 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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changeset
|
5824 |
|
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|
5825 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
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changeset
|
5826 'Resources' : [ i ], |
|
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|
5827 'StorageCommitment' : True, |
|
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changeset
|
5828 }) |
|
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diff
changeset
|
5829 |
|
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changeset
|
5830 transaction = j['StorageCommitmentTransactionUID'] |
|
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|
5831 self.assertTrue(transaction.startswith('2.25.')) |
|
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changeset
|
5832 |
|
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changeset
|
5833 result = WaitTransaction(transaction) |
|
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changeset
|
5834 self.assertEqual('ORTHANC', result['RemoteAET']) |
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changeset
|
5835 self.assertEqual('Success', result['Status']) |
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changeset
|
5836 self.assertEqual(1, len(result['Success'])) |
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changeset
|
5837 self.assertEqual(0, len(result['Failures'])) |
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changeset
|
5838 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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changeset
|
5839 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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changeset
|
5840 result['Success'][0]['SOPInstanceUID']) |
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changeset
|
5841 |
|
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changeset
|
5842 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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changeset
|
5843 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
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changeset
|
5844 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
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|
5845 |
|
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changeset
|
5846 |
|
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changeset
|
5847 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
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|
5848 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5849 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
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|
5850 |
|
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changeset
|
5851 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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|
5852 dicom = f.read() |
|
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|
5853 |
|
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changeset
|
5854 self.assertRaises(Exception, lambda: DoPost( |
|
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|
5855 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
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|
5856 |
|
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changeset
|
5857 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
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|
5858 |
|
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changeset
|
5859 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
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|
5860 answer['SOPClassUID']) |
|
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|
5861 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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|
5862 answer['SOPInstanceUID']) |
|
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|
5863 |
|
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|
5864 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5865 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
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|
5866 |
|
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|
5867 |
|
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|
5868 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
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|
5869 # Add a RLE-encoded DICOM file |
|
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|
5870 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
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|
5871 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5872 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
5873 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5874 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5875 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5876 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5877 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5878 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5879 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5880 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5881 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5882 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5883 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5884 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5885 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5886 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5887 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5888 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5889 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5890 # Export, with transcoding disabled => this fails |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5891 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5892 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5893 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
5894 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5895 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5896 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5897 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5898 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5899 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5900 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5901 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5902 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5903 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5904 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5905 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5906 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5907 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5908 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5909 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5910 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5911 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5912 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5913 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5914 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5915 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5916 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5917 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5918 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5919 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5920 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5921 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5922 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5923 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5924 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5925 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5926 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5927 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5928 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5929 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5930 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5931 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5932 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5933 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5934 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5935 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5936 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
5937 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5938 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5939 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5940 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5941 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5942 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5943 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5944 |
| 304 | 5945 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5946 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5947 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5948 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5949 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5950 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5951 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5952 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5953 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5954 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5955 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5956 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5957 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5958 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5959 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5960 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5961 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5962 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5963 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5964 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5965 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5966 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5967 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5968 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5969 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5970 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5971 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5972 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5973 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5974 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5975 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5976 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5977 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5978 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5979 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5980 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5981 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5982 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5983 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5984 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5985 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5986 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5987 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5988 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5989 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5990 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5991 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5992 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5993 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5994 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5995 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5996 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5997 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5998 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5999 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6000 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6001 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6002 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6003 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6004 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6005 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6006 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6007 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6008 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6009 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6010 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6011 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6012 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6013 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6014 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6015 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6016 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6017 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6018 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6019 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6020 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6021 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6022 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6023 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6024 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6025 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6026 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6027 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6028 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6029 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6030 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6031 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6032 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6033 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6034 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6035 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6036 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6037 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6038 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6039 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6040 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6041 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6042 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6043 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6044 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6045 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6046 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6047 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6048 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6049 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6050 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6051 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6052 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6053 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6054 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6055 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6056 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6057 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6058 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6059 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6060 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6061 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6062 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6063 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6064 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6065 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6066 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6067 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6068 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6069 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6070 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6071 |
| 308 | 6072 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6073 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6074 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6075 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6076 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6077 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6078 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6079 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6080 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6081 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6082 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6083 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6084 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6085 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6086 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6087 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6088 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6089 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6090 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6091 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6092 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6093 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6094 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6095 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6096 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6097 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6098 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6099 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6100 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6101 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6102 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6103 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6104 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6105 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6106 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
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diff
changeset
|
6107 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6108 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6109 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6110 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6111 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6112 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
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parents:
301
diff
changeset
|
6113 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
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parents:
301
diff
changeset
|
6114 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6115 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6116 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6117 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6118 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6119 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6120 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6121 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6122 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6123 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6124 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6125 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6126 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6127 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6128 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6129 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6130 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6131 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6132 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6133 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6134 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6135 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6136 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6137 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6138 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6139 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6140 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6141 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6142 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6143 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6144 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6145 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6146 for syntax in SYNTAXES: |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6147 body = { |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6148 'Resources' : [ i ], |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6149 } |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6150 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6151 if syntax != '1.2.840.10008.1.2.1': |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6152 body['Transcode'] = syntax |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6153 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6154 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6155 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6156 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6157 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6158 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6159 self.assertEqual(syntax, GetTransferSyntax( |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6160 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6161 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6162 DropOrthanc(_LOCAL) |
| 308 | 6163 |
| 6164 | |
| 295 | 6165 def test_getscu(self): |
| 307 | 6166 def CleanTarget(): |
| 6167 if os.path.isdir('/tmp/GETSCU'): | |
| 6168 shutil.rmtree('/tmp/GETSCU') | |
| 6169 os.makedirs('/tmp/GETSCU') | |
| 6170 | |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
6171 env = {} |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6172 if _DOCKER: |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
6173 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6174 # and running in a GNU/Linux distribution running DCMTK |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
6175 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6176 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6177 |
| 295 | 6178 # no transcoding required |
| 307 | 6179 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6180 | |
| 6181 CleanTarget() | |
| 295 | 6182 |
|
306
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6183 subprocess.check_call([ |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
6184 FindExecutable('getscu'), |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6185 _REMOTE['Server'], |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6186 str(_REMOTE['DicomPort']), |
|
da2be3ff2db5
fix getscu binaries
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parents:
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diff
changeset
|
6187 '-aec', 'ORTHANC', |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
6188 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6189 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
306
da2be3ff2db5
fix getscu binaries
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parents:
296
diff
changeset
|
6190 '-k', '0008,0052=STUDY', |
|
da2be3ff2db5
fix getscu binaries
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parents:
296
diff
changeset
|
6191 '--output-directory', '/tmp/GETSCU/' |
|
da2be3ff2db5
fix getscu binaries
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parents:
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diff
changeset
|
6192 ], env = env) |
| 295 | 6193 |
| 311 | 6194 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6195 self.assertTrue(os.path.isfile(f1)) | |
| 6196 with open(f1, 'rb') as f: | |
| 6197 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6198 | |
| 307 | 6199 CleanTarget() |
| 295 | 6200 |
| 6201 # transcoding required | |
| 311 | 6202 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6203 |
| 6204 subprocess.check_call([ | |
| 6205 FindExecutable('getscu'), | |
| 6206 _REMOTE['Server'], | |
| 6207 str(_REMOTE['DicomPort']), | |
| 6208 '-aec', 'ORTHANC', | |
| 6209 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6210 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6211 '-k', '0008,0052=STUDY', |
| 6212 '--output-directory', '/tmp/GETSCU/' | |
| 6213 ], env = env) | |
| 6214 | |
| 311 | 6215 self.assertTrue(os.path.isfile(f1)) |
| 6216 with open(f1, 'rb') as f: | |
| 6217 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6218 | |
| 6219 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6220 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6221 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6222 self.assertTrue(os.path.isfile(f2)) | |
| 6223 with open(f2, 'rb') as f: | |
| 6224 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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|
6225 |
|
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|
6226 |
|
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|
6227 def test_findscu_truncation(self): |
|
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|
6228 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
|
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|
6229 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
|
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|
6230 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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|
6231 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
6232 |
|
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|
6233 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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|
6234 |
|
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|
6235 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
|
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|
6236 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6237 self.assertEqual(2, len(result)) |
|
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6238 |
|
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|
6239 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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6240 # study, leading to a string of 249 characters |
|
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|
6241 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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diff
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|
6242 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
|
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|
6243 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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diff
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|
6244 self.assertEqual(1, len(result)) |
|
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diff
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|
6245 |
|
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|
6246 # The "StudyInstanceUID" is set as a list of 6 times the same |
|
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|
6247 # study, leading to a string of 299 characters. In Orthanc <= |
|
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|
6248 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
|
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diff
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|
6249 # == 256, and is thus wiped out by C-FIND SCP. As a |
|
6164d39399ad
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diff
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|
6250 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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diff
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|
6251 # "StudyInstanceUID" and returns all the available |
|
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diff
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|
6252 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
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|
6253 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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diff
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|
6254 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
|
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diff
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|
6255 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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diff
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|
6256 self.assertEqual(1, len(result)) |
|
328
8a462f9c5a97
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diff
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|
6257 |
|
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diff
changeset
|
6258 |
|
8a462f9c5a97
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diff
changeset
|
6259 def test_store_compressed(self): |
|
8a462f9c5a97
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diff
changeset
|
6260 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
8a462f9c5a97
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diff
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|
6261 dicom = f.read() |
|
8a462f9c5a97
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diff
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|
6262 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
|
8a462f9c5a97
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diff
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|
6263 sourceSize = len(dicom) |
|
324
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|
6264 |
|
328
8a462f9c5a97
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diff
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|
6265 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
8a462f9c5a97
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diff
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|
6266 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
8a462f9c5a97
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diff
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|
6267 |
|
8a462f9c5a97
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327
diff
changeset
|
6268 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
8a462f9c5a97
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diff
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|
6269 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
8a462f9c5a97
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327
diff
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|
6270 _REMOTE, '/peers/peer/store', { |
|
8a462f9c5a97
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327
diff
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|
6271 'Resources' : [ i ], |
|
8a462f9c5a97
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327
diff
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|
6272 'Synchronous' : False, |
|
8a462f9c5a97
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327
diff
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|
6273 })) |
|
8a462f9c5a97
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327
diff
changeset
|
6274 |
|
8a462f9c5a97
test_store_compressed
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327
diff
changeset
|
6275 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
8a462f9c5a97
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6276 self.assertFalse(job['Content']['Compress']) |
|
8a462f9c5a97
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diff
changeset
|
6277 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
8a462f9c5a97
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diff
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|
6278 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
8a462f9c5a97
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6279 |
|
8a462f9c5a97
test_store_compressed
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327
diff
changeset
|
6280 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
8a462f9c5a97
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diff
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|
6281 DropOrthanc(_LOCAL) |
|
8a462f9c5a97
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327
diff
changeset
|
6282 |
|
8a462f9c5a97
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327
diff
changeset
|
6283 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
8a462f9c5a97
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|
6284 # Not supported by Orthanc 0.8.6 => failure |
|
8a462f9c5a97
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diff
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|
6285 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
8a462f9c5a97
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diff
changeset
|
6286 'Resources' : [ i ], |
|
8a462f9c5a97
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327
diff
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|
6287 'Compress' : True, |
|
8a462f9c5a97
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diff
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|
6288 })) |
|
8a462f9c5a97
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diff
changeset
|
6289 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
8a462f9c5a97
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diff
changeset
|
6290 |
|
8a462f9c5a97
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diff
changeset
|
6291 # Sending to the tested remote server, with compression: OK |
|
8a462f9c5a97
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diff
changeset
|
6292 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
8a462f9c5a97
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|
6293 _REMOTE, '/peers/self/store', { |
|
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|
6294 'Resources' : [ i ], |
|
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|
6295 'Compress' : True, |
|
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diff
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|
6296 'Synchronous' : False, |
|
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|
6297 })) |
|
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diff
changeset
|
6298 |
|
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diff
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|
6299 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
6300 self.assertTrue(job['Content']['Compress']) |
|
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|
6301 |
|
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diff
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|
6302 # Compression must have divided the size of the sent data at least twice |
|
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changeset
|
6303 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6304 |
| 6305 | |
| 6306 def test_move_ambra(self): | |
| 6307 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6308 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6309 | |
| 6310 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6311 | |
| 6312 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6313 '--study', | |
| 6314 '-k', 'StudyInstanceUID=' | |
| 6315 ]))) | |
| 6316 | |
| 6317 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6318 '--study', | |
| 6319 '-k', 'AccessionNumber=', | |
| 6320 ]))) | |
| 6321 | |
| 6322 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6323 '--study', | |
| 6324 '-k', 'AccessionNumber=', | |
| 6325 '-k', 'StudyInstanceUID=' | |
| 6326 ]))) | |
| 6327 | |
| 6328 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6329 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6330 '--study', | |
| 6331 '-k', 'AccessionNumber=CT16000988', | |
| 6332 '-k', 'StudyInstanceUID=', | |
| 6333 ]))) | |
| 6334 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6335 DropOrthanc(_LOCAL) | |
| 6336 | |
| 6337 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6338 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6339 '--study', | |
| 6340 '-k', 'AccessionNumber=CT16000988', | |
| 6341 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6342 ]))) | |
| 6343 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6344 DropOrthanc(_LOCAL) | |
| 6345 | |
| 6346 # This fails on Orthanc <= 1.7.3 | |
| 6347 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6348 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6349 '--study', | |
| 6350 '-k', 'AccessionNumber=', | |
| 6351 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6352 ]))) | |
| 6353 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6354 DropOrthanc(_LOCAL) | |
|
333
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|
6355 |
|
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|
6356 |
|
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diff
changeset
|
6357 def test_decode_elscint(self): |
|
695be643b0f4
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changeset
|
6358 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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test_decode_elscint
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diff
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|
6359 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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diff
changeset
|
6360 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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diff
changeset
|
6361 |
|
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diff
changeset
|
6362 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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diff
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|
6363 self.assertEqual("L", im.mode) |
|
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|
6364 self.assertEqual(512, im.size[0]) |
|
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diff
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|
6365 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
6366 |
|
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diff
changeset
|
6367 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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diff
changeset
|
6368 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
6369 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
6370 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
6371 |
|
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diff
changeset
|
6372 # The two tests below fail on Orthanc <= 1.7.3 |
|
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diff
changeset
|
6373 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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diff
changeset
|
6374 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6375 |
|
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diff
changeset
|
6376 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
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diff
changeset
|
6377 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6378 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6379 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6380 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
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diff
changeset
|
6381 # Problem reported by Alain Mazy on 2020-09-15 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6382 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
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diff
changeset
|
6383 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6384 |
|
335
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diff
changeset
|
6385 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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diff
changeset
|
6386 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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diff
changeset
|
6387 self.assertEqual(1, len(modalitiesInStudy)) |
|
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diff
changeset
|
6388 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
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diff
changeset
|
6389 |
|
96718de2f29c
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diff
changeset
|
6390 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
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diff
changeset
|
6391 # The empty string '' corresponds to universal matching. |
|
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diff
changeset
|
6392 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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diff
changeset
|
6393 |
|
96718de2f29c
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334
diff
changeset
|
6394 if i in [ 'UX', 'UX\\MR' ]: |
|
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diff
changeset
|
6395 expected = 0 |
|
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diff
changeset
|
6396 else: |
|
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diff
changeset
|
6397 expected = 1 |
|
96718de2f29c
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diff
changeset
|
6398 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6399 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6400 'Query' : { 'ModalitiesInStudy' : i }}) |
|
335
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diff
changeset
|
6401 self.assertEqual(expected, len(a)) |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6402 |
|
971ff285302b
test_rest_modalities_in_study_2
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parents:
333
diff
changeset
|
6403 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
971ff285302b
test_rest_modalities_in_study_2
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parents:
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diff
changeset
|
6404 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
335
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diff
changeset
|
6405 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
ec13ace43bde
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335
diff
changeset
|
6406 |
|
ec13ace43bde
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335
diff
changeset
|
6407 |
|
ec13ace43bde
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335
diff
changeset
|
6408 def test_webdav(self): |
|
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diff
changeset
|
6409 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
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diff
changeset
|
6410 |
|
342
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diff
changeset
|
6411 for suffix in [ '', '/' ]: |
|
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diff
changeset
|
6412 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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diff
changeset
|
6413 self.assertEqual(1, len(f)) |
|
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diff
changeset
|
6414 self.assertTrue('/webdav/' in f.keys()) |
|
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diff
changeset
|
6415 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
6416 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6417 |
|
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341
diff
changeset
|
6418 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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diff
changeset
|
6419 self.assertEqual(6, len(f)) |
|
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diff
changeset
|
6420 self.assertTrue(f['/webdav/']['folder']) |
|
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diff
changeset
|
6421 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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341
diff
changeset
|
6422 |
|
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341
diff
changeset
|
6423 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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diff
changeset
|
6424 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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341
diff
changeset
|
6425 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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341
diff
changeset
|
6426 |
|
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341
diff
changeset
|
6427 for depth in [ 0, 1 ]: |
|
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341
diff
changeset
|
6428 for suffix2 in [ '', '/' ]: |
|
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341
diff
changeset
|
6429 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
changeset
|
6430 |
|
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341
diff
changeset
|
6431 if i == 'uploads': |
|
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diff
changeset
|
6432 # Empty folders might still exist in "/uploads/" |
|
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341
diff
changeset
|
6433 self.assertTrue('/webdav/uploads/' in g) |
|
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341
diff
changeset
|
6434 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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diff
changeset
|
6435 for j in g.items(): |
|
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diff
changeset
|
6436 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
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|
6437 else: |
|
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diff
changeset
|
6438 self.assertEqual(1, len(g)) |
|
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diff
changeset
|
6439 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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diff
changeset
|
6440 self.assertTrue(g.items()[0][1]['folder']) |
|
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341
diff
changeset
|
6441 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
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diff
changeset
|
6442 |
|
342
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diff
changeset
|
6443 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
6444 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
6445 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
6446 |
|
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341
diff
changeset
|
6447 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
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diff
changeset
|
6448 time.sleep(0.01) |
|
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diff
changeset
|
6449 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
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diff
changeset
|
6450 |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
6451 |
|
698898a93a10
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diff
changeset
|
6452 def test_log_categories(self): |
| 350 | 6453 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
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|
6454 |
| 350 | 6455 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6456 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
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diff
changeset
|
6457 DoGet(_REMOTE, '/system') |
|
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diff
changeset
|
6458 |
| 350 | 6459 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6460 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
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diff
changeset
|
6461 DoGet(_REMOTE, '/system') |
|
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diff
changeset
|
6462 |
| 350 | 6463 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6464 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
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diff
changeset
|
6465 DoGet(_REMOTE, '/system') |
|
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diff
changeset
|
6466 |
| 350 | 6467 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
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diff
changeset
|
6468 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6469 # Switch back to the original log level |
| 350 | 6470 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6471 | |
| 6472 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6473 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6474 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6475 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6476 |
| 6477 | |
| 6478 def test_upload_zip(self): | |
| 6479 f = StringIO() | |
| 6480 with zipfile.ZipFile(f, 'w') as z: | |
| 6481 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6482 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6483 c = g.read() | |
| 6484 z.writestr('hello/world/dicom1.dcm', c) | |
| 6485 z.writestr('hello/world/dicom2.dcm', c) | |
| 6486 | |
| 6487 f.seek(0) | |
| 6488 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6489 | |
| 6490 self.assertEqual(2, len(i)) | |
| 6491 self.assertEqual(i[0], i[1]) | |
| 6492 self.assertEqual(6, len(i[0])) | |
| 6493 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 6494 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 6495 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 6496 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 6497 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 6498 | |
| 6499 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 6500 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6501 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6502 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6503 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6504 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6505 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6506 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6507 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6508 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6509 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6510 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6511 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6512 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6513 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6514 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6515 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6516 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6517 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6518 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6519 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6520 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6521 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6522 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6523 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6524 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6525 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6526 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6527 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6528 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6529 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6530 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6531 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6532 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6533 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6534 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6535 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6536 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6537 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6538 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6539 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6540 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6541 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6542 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6543 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6544 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6545 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6546 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6547 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6548 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6549 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6550 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6551 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6552 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6553 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6554 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6555 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6556 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6557 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6558 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6559 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6560 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6561 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6562 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6563 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6564 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6565 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6566 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6567 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6568 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6569 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6570 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6571 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6572 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6573 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6574 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6575 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6576 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6577 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6578 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6579 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6580 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6581 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6582 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6583 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6584 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6585 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6586 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6587 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6588 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6589 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6590 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6591 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6592 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6593 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6594 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6595 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6596 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6597 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6598 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6599 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6600 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6601 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6602 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6603 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
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parents:
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diff
changeset
|
6604 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
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parents:
374
diff
changeset
|
6605 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6606 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6607 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6608 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6609 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6610 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6611 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6612 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6613 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6614 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6615 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6616 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6617 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6618 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6619 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6620 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6621 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6622 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6623 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6624 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6625 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6626 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6627 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6628 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6629 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6630 self.assertEqual(3, len(peer)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6631 self.assertEqual(5, peer['DatabaseVersion']) |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6632 self.assertEqual('MyOrthanc', peer['Name']) |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6633 self.assertEqual('0.8.6', peer['Version']) |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6634 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6635 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6636 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6637 |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6638 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6639 # "ParentStudy", "ParentSeries" are not reported |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6640 self.assertEqual(3, len(j)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6641 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6642 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
a8dd562943a7
added test_peer_store_straight
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parents:
380
diff
changeset
|
6643 self.assertEqual('Success', j['Status']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6644 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6645 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6646 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 6647 |
| 6648 | |
| 6649 def test_cp246(self): | |
| 6650 # This fails on Orthanc <= 1.9.0 | |
| 6651 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 6652 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 6653 | |
| 6654 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 6655 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 6656 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 6657 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 6658 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 6659 | |
| 6660 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 6661 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 6662 | |
| 6663 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 6664 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 6665 | |
| 6666 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 6667 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 6668 | |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6669 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
6670 def test_revisions_metadata(self): |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6671 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6672 # was introduced in 1.9.2), or if configuration option |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6673 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6674 # related to revisions mimic CouchDB: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6675 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6676 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6677 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6678 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6679 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6680 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6681 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6682 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6683 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6684 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6685 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6686 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6687 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6688 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6689 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6690 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6691 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6692 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6693 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6694 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6695 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6696 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6697 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6698 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6699 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6700 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6701 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6702 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6703 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6704 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6705 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6706 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6707 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6708 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6709 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6710 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6711 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6712 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6713 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6714 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6715 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6716 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6717 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6718 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6719 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6720 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6721 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6722 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6723 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6724 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6725 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6726 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6727 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6728 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6729 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6730 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6731 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6732 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6733 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6734 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6735 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6736 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6737 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6738 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6739 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6740 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6741 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6742 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6743 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6744 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6745 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6746 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6747 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6748 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6749 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6750 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6751 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6752 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6753 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6754 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6755 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6756 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6757 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6758 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6759 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6760 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6761 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6762 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6763 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6764 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6765 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6766 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6767 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6768 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6769 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6770 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6771 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6772 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6773 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6774 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6775 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6776 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6777 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6778 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6779 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6780 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6781 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6782 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6783 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6784 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6785 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6786 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6787 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6788 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6789 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6790 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6791 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6792 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6793 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6794 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6795 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6796 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6797 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6798 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6799 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6800 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6801 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6802 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6803 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6804 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6805 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6806 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6807 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6808 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6809 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6810 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6811 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6812 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6813 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6814 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6815 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6816 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6817 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6818 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6819 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6820 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6821 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6822 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6823 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6824 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6825 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6826 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6827 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6828 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6829 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6830 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6831 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6832 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6833 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6834 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6835 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6836 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6837 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6838 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6839 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6840 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6841 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6842 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6843 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6844 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6845 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6846 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6847 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6848 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6849 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6850 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6851 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6852 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6853 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6854 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6855 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6856 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6857 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6858 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6859 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6860 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6861 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6862 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6863 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6864 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6865 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6866 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6867 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6868 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6869 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6870 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6871 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6872 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6873 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6874 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6875 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6876 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6877 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6878 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6879 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6880 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6881 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6882 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6883 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6884 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6885 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6886 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6887 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6888 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6889 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6890 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6891 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6892 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6893 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6894 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6895 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6896 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6897 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6898 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6899 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6900 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6901 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6902 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6903 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6904 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6905 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6906 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6907 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6908 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6909 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6910 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6911 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6912 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6913 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6914 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6915 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6916 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6917 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6918 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6919 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6920 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6921 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6922 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6923 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6924 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6925 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6926 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6927 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6928 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6929 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6930 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6931 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6932 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6933 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6934 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6935 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6936 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6937 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6938 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6939 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6940 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6941 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6942 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6943 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6944 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6945 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6946 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6947 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6948 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6949 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6950 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6951 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6952 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6953 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6954 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6955 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6956 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6957 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6958 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6959 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6960 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6961 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6962 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6963 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6964 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6965 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6966 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6967 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6968 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6969 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6970 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6971 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6972 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6973 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6974 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6975 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6976 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6977 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6978 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6979 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6980 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6981 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6982 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6983 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6984 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6985 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6986 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6987 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6988 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6989 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6990 self.assertEqual('{}', body) |
|
3019306499c5
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parents:
392
diff
changeset
|
6991 |
|
3019306499c5
test_revisions_attachments
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parents:
392
diff
changeset
|
6992 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6993 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6994 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6995 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
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diff
changeset
|
6996 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6997 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6998 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6999 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
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parents:
397
diff
changeset
|
7000 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
7001 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7002 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7003 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7004 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7005 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7006 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7007 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7008 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7009 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7010 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7011 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7012 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7013 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7014 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7015 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7016 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7017 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7018 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7019 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7020 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7021 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7022 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7023 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7024 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7025 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7026 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7027 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7028 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7029 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7030 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7031 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7032 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7033 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7034 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7035 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7036 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7037 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7038 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7039 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7040 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7041 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7042 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7043 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7044 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7045 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7046 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7047 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7048 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7049 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7050 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7051 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7052 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7053 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7054 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7055 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7056 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7057 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7058 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7059 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7060 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7061 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7062 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7063 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7064 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7065 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7066 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7067 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7068 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7069 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7070 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7071 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7072 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7073 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7074 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7075 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7076 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7077 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7078 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7079 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7080 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7081 |
| 7082 | |
| 7083 def test_issue_146(self): | |
| 7084 # "Update Anonyization to 2019c" | |
| 7085 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7086 | |
| 7087 def GetTags(study, params): | |
| 7088 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7089 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7090 self.assertEqual(1, len(b)) | |
| 7091 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7092 | |
| 7093 | |
| 7094 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7095 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7096 | |
| 7097 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7098 | |
| 7099 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7100 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7101 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7102 tagsDefault = GetTags(study, {}) | |
| 7103 | |
| 420 | 7104 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7105 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7106 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7107 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7108 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7109 | |
| 7110 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7111 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7112 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7113 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7114 self.assertEqual('YES', t['0012,0062']) | |
| 7115 | |
| 7116 for t in [ tags2008 ]: | |
| 7117 self.assertEqual('20200101', t['0008,0020']) | |
| 7118 | |
| 7119 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7120 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7121 | |
| 7122 for t in [ tags2008, tags2017c ]: | |
| 7123 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7124 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7125 | |
| 7126 for t in [ tags2021b, tagsDefault ]: | |
| 7127 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7128 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7129 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7130 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7131 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7132 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7133 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7134 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7135 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7136 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7137 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7138 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7139 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7140 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7141 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7142 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7143 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7144 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7145 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7146 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7147 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7148 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7149 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7150 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7151 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7152 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7153 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7154 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7155 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7156 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7157 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7158 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7159 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7160 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7161 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7162 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7163 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7164 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7165 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7166 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7167 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7168 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7169 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7170 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7171 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7172 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7173 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7174 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7175 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7176 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7177 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7178 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7179 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7180 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7181 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7182 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7183 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7184 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7185 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7186 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7187 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7188 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7189 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7190 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7191 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7192 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7193 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7194 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7195 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7196 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7197 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7198 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7199 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7200 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7201 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7202 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7203 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7204 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7205 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7206 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7207 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7208 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7209 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7210 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7211 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7212 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7213 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7214 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7215 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7216 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7217 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7218 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7219 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7220 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7221 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7222 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7223 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7224 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7225 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7226 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7227 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7228 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7229 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7230 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7231 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7232 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7233 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7234 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7235 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7236 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7237 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7238 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7239 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7240 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7241 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7242 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7243 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7244 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7245 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7246 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7247 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7248 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7249 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7250 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7251 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7252 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7253 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7254 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7255 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7256 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7257 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7258 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7259 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7260 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7261 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7262 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7263 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7264 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7265 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7266 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7267 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7268 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7269 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7270 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7271 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7272 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7273 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7274 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7275 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7276 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7277 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7278 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7279 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7280 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7281 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7282 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7283 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7284 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7285 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7286 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7287 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7288 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7289 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7290 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7291 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7292 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7293 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7294 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7295 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7296 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7297 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7298 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7299 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7300 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7301 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7302 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7303 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7304 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7305 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7306 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7307 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7308 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7309 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7310 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7311 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7312 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7313 |
| 7314 | |
| 7315 def test_bulk_modify(self): | |
| 7316 # New in Orthanc 1.9.4 | |
| 7317 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7318 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7319 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7320 if expectedCount != None: |
| 7321 self.assertEqual(expectedCount, len(m)) | |
| 7322 return m | |
| 7323 | |
| 7324 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7325 series = DoGet(_REMOTE, '/series') [0] | |
| 7326 study = DoGet(_REMOTE, '/studies') [0] | |
| 7327 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7328 | |
| 7329 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7330 'Resources' : [ instance ] | |
| 7331 }) | |
| 7332 | |
| 7333 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7334 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7335 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7336 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7337 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7338 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7339 'Resources' : [ instance ] |
| 7340 }) | |
| 7341 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7342 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7343 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7344 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7345 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7346 |
| 7347 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7348 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7349 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7350 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7351 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7352 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7353 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7354 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7355 |
| 410 | 7356 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7357 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7358 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7359 | |
| 7360 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7361 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7362 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7363 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7364 | |
| 7365 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7366 'Resources' : [ knee1, brainix ] | |
| 7367 }) | |
| 7368 | |
| 7369 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7370 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7371 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7372 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7373 | |
| 7374 for i in GetModified(a, 'Instance', 2): | |
| 7375 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7376 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7377 | |
| 7378 b = GetModified(a, 'Series', 2) | |
| 7379 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7380 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7381 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7382 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7383 | |
| 7384 b = GetModified(a, 'Study', 2) | |
| 7385 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7386 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7387 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7388 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7389 | |
| 7390 b = GetModified(a, 'Patient', 2) | |
| 7391 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7392 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7393 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7394 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7395 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7396 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7397 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7398 }) |
| 410 | 7399 |
| 7400 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7401 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7402 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7403 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7404 self.assertEqual(4, len(sourceInstances)) | |
| 7405 self.assertEqual(4, len(sourceSeries)) | |
| 7406 self.assertEqual(3, len(sourceStudies)) | |
| 7407 self.assertEqual(3, len(sourcePatients)) | |
| 7408 | |
| 7409 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7410 'Resources' : [ knee1, brainix ] | |
| 7411 }) | |
| 7412 | |
| 7413 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7414 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7415 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7416 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7417 | |
| 7418 for i in GetModified(a, 'Instance', 2): | |
| 7419 self.assertFalse(i in sourceInstances) | |
| 7420 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7421 | |
| 7422 for i in GetModified(a, 'Series', 2): | |
| 7423 self.assertFalse(i in sourceSeries) | |
| 7424 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7425 | |
| 7426 for i in GetModified(a, 'Study', 2): | |
| 7427 self.assertFalse(i in sourceStudies) | |
| 7428 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7429 | |
| 7430 for i in GetModified(a, 'Patient', 2): | |
| 7431 self.assertFalse(i in sourcePatients) | |
| 7432 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7433 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7434 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7435 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7436 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7437 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7438 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7439 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7440 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7441 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7442 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7443 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7444 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7445 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7446 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7447 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7448 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7449 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7450 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7451 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7452 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7453 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7454 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7455 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7456 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7457 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7458 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7459 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7460 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7461 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7462 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7463 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7464 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7465 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7466 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7467 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7468 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7469 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7470 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7471 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7472 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7473 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7474 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7475 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7476 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7477 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7478 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7479 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7480 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7481 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7482 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7483 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7484 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7485 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7486 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7487 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7488 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7489 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7490 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7491 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7492 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7493 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7494 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7495 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7496 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7497 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7498 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7499 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7500 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7501 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7502 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7503 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7504 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7505 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7506 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7507 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7508 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7509 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7510 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7511 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7512 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7513 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7514 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7515 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7516 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7517 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7518 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7519 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7520 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7521 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7522 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7523 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7524 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7525 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7526 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7527 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7528 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7529 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7530 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7531 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7532 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7533 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7534 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7535 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7536 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7537 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7538 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7539 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7540 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7541 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7542 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7543 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7544 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7545 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7546 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7547 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7548 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7549 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7550 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7551 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7552 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7553 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7554 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7555 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7556 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7557 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7558 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7559 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7560 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7561 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7562 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7563 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7564 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7565 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7566 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7567 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7568 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7569 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7570 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7571 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7572 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7573 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7574 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7575 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7576 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7577 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7578 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7579 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7580 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7581 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7582 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7583 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7584 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7585 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7586 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7587 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7588 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7589 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7590 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7591 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7592 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7593 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7594 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7595 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7596 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7597 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7598 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7599 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7600 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7601 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7602 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7603 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7604 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7605 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7606 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7607 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7608 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7609 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7610 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7611 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7612 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7613 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7614 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7615 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7616 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7617 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7618 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7619 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7620 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7621 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7622 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7623 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7624 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7625 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7626 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7627 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7628 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7629 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7630 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7631 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7632 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7633 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7634 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7635 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7636 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7637 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7638 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7639 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7640 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7641 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7642 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7643 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7644 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7645 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7646 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7647 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7648 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7649 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7650 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7651 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7652 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7653 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7654 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7655 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7656 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7657 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7658 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7659 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7660 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 7661 |
| 7662 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 7663 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 7664 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 7665 | |
| 7666 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 7667 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 7668 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 7669 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 7670 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 7671 | |
| 7672 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 7673 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 7674 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 7675 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 7676 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 7677 | |
| 7678 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 7679 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 7680 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 7681 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 7682 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 7683 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7684 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7685 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7686 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7687 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7688 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7689 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7690 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7691 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7692 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7693 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7694 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7695 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7696 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7697 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7698 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7699 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7700 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7701 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7702 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7703 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7704 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7705 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7706 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7707 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7708 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7709 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7710 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7711 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7712 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7713 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7714 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7715 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7716 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7717 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7718 |
| 415 | 7719 |
| 7720 def test_bulk_content(self): | |
| 7721 # New in Orthanc 1.9.4 | |
| 7722 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 7723 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7724 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7725 | |
| 7726 brainixHierarchy = [ | |
| 7727 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 7728 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 7729 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 7730 brainix, | |
| 7731 ] | |
| 7732 | |
| 7733 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 7734 self.assertEqual(4, len(a)) | |
| 7735 b = map(lambda x: x['ID'], a) | |
| 7736 for i in range(4): | |
| 7737 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7738 self.assertTrue('Metadata' in a[i]) |
| 415 | 7739 |
| 7740 for (level, index) in [ | |
| 7741 ('Patient', 0), | |
| 7742 ('Study', 1), | |
| 7743 ('Series', 2), | |
| 7744 ('Instance', 3), | |
| 7745 ]: | |
| 7746 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 7747 'Level' : level }) | |
| 7748 self.assertEqual(1, len(a)) | |
| 7749 self.assertEqual(level, a[0]['Type']) | |
| 7750 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7751 self.assertTrue('Metadata' in a[0]) |
| 415 | 7752 |
| 7753 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7754 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7755 'Metadata' : False }) |
| 415 | 7756 self.assertEqual(1, len(a)) |
| 7757 self.assertEqual(level, a[0]['Type']) | |
| 7758 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7759 self.assertFalse('Metadata' in a[0]) |
| 415 | 7760 |
| 7761 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 7762 self.assertEqual(3, len(a)) | |
| 7763 for item in a: | |
| 7764 self.assertEqual('Instance', item['Type']) | |
| 7765 b = map(lambda x: x['ID'], a) | |
| 7766 self.assertTrue(knee1 in b) | |
| 7767 self.assertTrue(knee2 in b) | |
| 7768 self.assertTrue(brainix in b) | |
| 7769 | |
| 7770 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 7771 'Level' : 'Series' }) | |
| 7772 self.assertEqual(2, len(a)) | |
| 7773 for item in a: | |
| 7774 self.assertEqual('Series', item['Type']) | |
| 7775 b = map(lambda x: x['ID'], a) | |
| 7776 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 7777 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 7778 | |
| 7779 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7780 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7781 'Metadata' : False }) |
| 415 | 7782 self.assertEqual(1, len(a)) |
| 7783 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 7784 self.assertEqual('Study', a[0]['Type']) | |
| 7785 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7786 self.assertFalse('Metadata' in a[0]) |
| 415 | 7787 |
| 7788 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7789 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7790 'Metadata' : True }) |
| 415 | 7791 self.assertEqual(1, len(a)) |
| 7792 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 7793 self.assertEqual('Patient', a[0]['Type']) | |
| 7794 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7795 self.assertTrue('Metadata' in a[0]) |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7796 self.assertEqual(1, len(a[0]['Metadata'])) |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7797 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 7798 |
| 7799 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 7800 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 7801 'Level' : level }) | |
| 7802 self.assertEqual(2, len(a)) | |
| 7803 for item in a: | |
| 7804 self.assertEqual(level, item['Type']) | |
| 7805 b = map(lambda x: x['ID'], a) | |
| 7806 if level == 'Instance': | |
| 7807 self.assertTrue(knee1 in b) | |
| 7808 self.assertTrue(brainix in b) | |
| 7809 else: | |
| 7810 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 7811 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7812 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7813 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7814 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7815 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7816 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7817 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7818 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7819 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7820 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7821 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7822 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7823 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7824 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7825 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7826 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7827 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7828 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7829 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7830 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7831 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7832 |
| 417 | 7833 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 7834 'KeepSource' : False | |
| 7835 })) # Neither "Instances", nor "Series" | |
| 7836 | |
| 7837 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7838 'KeepSource' : False, | |
| 7839 'Instances' : [ ], | |
| 7840 'Series' : [ ] | |
| 7841 })) # Empty "Instances" and "Series" | |
| 7842 | |
| 7843 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7844 'Instances' : [ 'nope' ], | |
| 7845 'KeepSource' : False | |
| 7846 })) | |
| 7847 | |
| 7848 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7849 'Series' : [ 'nope' ], | |
| 7850 'KeepSource' : False | |
| 7851 })) | |
| 7852 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7853 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7854 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7855 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7856 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7857 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7858 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7859 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7860 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7861 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7862 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7863 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7864 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7865 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7866 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7867 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7868 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7869 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7870 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7871 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7872 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7873 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7874 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7875 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7876 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7877 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7878 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7879 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7880 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7881 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7882 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7883 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7884 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7885 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7886 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7887 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7888 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7889 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7890 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7891 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7892 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7893 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7894 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7895 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7896 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7897 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7898 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7899 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7900 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7901 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7902 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7903 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7904 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7905 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7906 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7907 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7908 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7909 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7910 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7911 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7912 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7913 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7914 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7915 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7916 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7917 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7918 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7919 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7920 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7921 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7922 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7923 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7924 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7925 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7926 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7927 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7928 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7929 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7930 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7931 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7932 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7933 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7934 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7935 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7936 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7937 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7938 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7939 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7940 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7941 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7942 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7943 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7944 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7945 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7946 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7947 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7948 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7949 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7950 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7951 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7952 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7953 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7954 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7955 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7956 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7957 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7958 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7959 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7960 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7961 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7962 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7963 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7964 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7965 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7966 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7967 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7968 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7969 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7970 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7971 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7972 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7973 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7974 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7975 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7976 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7977 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7978 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7979 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7980 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7981 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7982 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7983 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7984 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7985 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7986 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7987 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7988 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7989 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7990 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7991 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7992 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7993 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7994 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7995 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7996 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7997 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7998 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7999 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8000 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8001 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8002 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8003 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8004 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8005 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8006 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8007 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8008 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8009 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8010 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8011 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8012 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8013 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8014 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8015 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8016 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8017 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8018 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8019 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8020 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8021 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8022 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8023 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8024 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8025 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8026 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8027 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8028 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8029 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8030 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8031 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8032 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8033 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8034 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8035 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8036 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8037 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8038 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8039 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8040 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8041 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8042 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8043 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8044 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8045 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8046 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8047 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8048 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8049 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8050 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8051 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8052 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8053 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8054 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8055 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8056 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8057 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8058 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8059 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8060 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8061 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8062 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8063 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8064 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8065 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8066 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8067 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8068 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8069 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8070 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8071 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8072 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8073 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8074 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8075 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8076 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8077 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8078 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8079 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8080 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8081 |
| 8082 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8083 self.assertEqual(1, len(last)) | |
| 8084 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8085 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8086 |
| 8087 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8088 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8089 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8090 | |
| 8091 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8092 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8093 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8094 | |
| 8095 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8096 self.assertEqual(1, len(last)) | |
| 8097 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8098 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8099 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8100 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8101 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8102 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8103 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8104 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8105 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8106 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8107 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8108 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8109 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8110 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8111 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8112 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8113 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8114 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8115 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8116 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8117 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8118 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8119 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8120 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8121 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8122 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8123 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8124 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8125 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8126 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8127 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8128 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8129 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8130 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8131 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8132 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8133 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8134 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8135 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8136 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8137 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8138 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8139 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8140 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8141 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8142 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8143 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8144 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8145 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8146 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8147 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8148 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8149 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8150 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8151 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8152 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8153 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8154 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8155 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8156 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8157 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8158 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8159 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8160 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8161 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8162 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8163 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8164 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8165 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8166 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8167 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8168 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8169 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8170 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8171 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8172 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8173 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8174 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8175 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8176 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8177 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8178 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8179 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8180 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8181 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8182 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8183 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8184 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8185 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8186 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8187 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8188 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8189 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8190 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8191 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8192 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8193 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8194 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8195 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8196 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8197 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8198 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8199 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8200 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8201 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8202 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8203 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8204 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8205 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8206 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8207 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8208 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8209 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8210 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8211 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8212 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8213 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8214 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8215 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8216 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8217 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8218 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8219 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8220 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8221 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8222 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8223 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8224 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8225 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8226 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8227 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8228 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8229 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8230 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8231 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8232 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8233 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8234 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8235 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8236 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8237 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8238 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8239 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8240 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8241 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8242 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8243 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8244 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8245 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8246 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8247 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8248 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8249 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8250 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8251 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8252 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8253 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8254 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8255 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8256 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8257 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8258 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8259 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8260 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8261 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8262 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8263 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8264 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8265 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8266 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8267 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8268 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8269 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8270 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8271 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8272 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8273 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8274 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8275 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8276 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8277 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8278 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8279 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8280 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8281 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8282 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8283 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8284 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8285 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8286 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8287 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8288 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8289 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8290 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8291 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8292 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8293 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8294 |
| 8295 | |
| 8296 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8297 # New in Orthanc 1.10.0 |
| 440 | 8298 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 8299 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8300 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8301 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 8302 |
| 8303 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8304 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8305 self.assertEqual(numpy.float32, c.dtype) | |
| 8306 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8307 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8308 self.assertAlmostEqual(536, c.max()) |
| 440 | 8309 |
| 8310 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8311 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8312 self.assertEqual(numpy.uint16, c.dtype) | |
| 8313 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8314 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8315 self.assertEqual(536, c.max()) |
| 440 | 8316 |
| 8317 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8318 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8319 self.assertEqual(numpy.float32, c.dtype) | |
| 8320 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8321 | |
| 8322 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8323 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8324 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8325 self.assertEqual(numpy.float32, c.dtype) | |
| 8326 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8327 | |
| 8328 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8329 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8330 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8331 self.assertEqual(numpy.float32, c.dtype) | |
| 8332 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8333 | |
| 8334 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8335 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8336 self.assertEqual(1, len(c.files)) | |
| 8337 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8338 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8339 | |
| 8340 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8341 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8342 self.assertEqual(numpy.float32, c.dtype) | |
| 8343 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8344 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8345 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8346 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8347 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8348 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8349 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8350 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8351 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8352 self.assertAlmostEqual(255, c.max()) |
| 440 | 8353 |
| 8354 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8355 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8356 self.assertEqual(numpy.float32, c.dtype) | |
| 8357 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8358 | |
| 8359 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8360 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8361 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8362 self.assertEqual(numpy.float32, c.dtype) | |
| 8363 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8364 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8365 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8366 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8367 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8368 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8369 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8370 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8371 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8372 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8373 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8374 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8375 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8376 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8377 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8378 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8379 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8380 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8381 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8382 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8383 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8384 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8385 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8386 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8387 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8388 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8389 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8390 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8391 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8392 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8393 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8394 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8395 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8396 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8397 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8398 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8399 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8400 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8401 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8402 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8403 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8404 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8405 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8406 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8407 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8408 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8409 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8410 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8411 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8412 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8413 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8414 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8415 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8416 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8417 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8418 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8419 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8420 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8421 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8422 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8423 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8424 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8425 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8426 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8427 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8428 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8429 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8430 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8431 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8432 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8433 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8434 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8435 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8436 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8437 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8438 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8439 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8440 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8441 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8442 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 8443 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
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8444 # representation. Support introduced in Orthanc 1.10.1. |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
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8445 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
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8446 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8447 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
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8448 headers = { 'Accept' : 'application/dicom+json' }) |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8449 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
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f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8450 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |