Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 403:e08e15befa0c
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| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 02 Jun 2021 17:42:20 +0200 |
| parents | cc947ddc57c5 |
| children | 6bbc89c2c2d1 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2021 Osimis S.A., Belgium |
| 3 | 9 # |
| 10 # This program is free software: you can redistribute it and/or | |
| 11 # modify it under the terms of the GNU General Public License as | |
| 12 # published by the Free Software Foundation, either version 3 of the | |
| 13 # License, or (at your option) any later version. | |
| 14 # | |
| 15 # This program is distributed in the hope that it will be useful, but | |
| 16 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 18 # General Public License for more details. | |
| 19 # | |
| 20 # You should have received a copy of the GNU General Public License | |
| 21 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 22 | |
| 23 | |
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24 import base64 |
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25 import bz2 |
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26 import copy |
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27 import pprint |
| 14 | 28 import tempfile |
| 3 | 29 import unittest |
| 295 | 30 import shutil |
| 3 | 31 |
| 11 | 32 from PIL import ImageChops |
| 3 | 33 from Toolbox import * |
| 13 | 34 from xml.dom import minidom |
| 312 | 35 from datetime import datetime |
| 3 | 36 |
| 37 _LOCAL = None | |
| 38 _REMOTE = None | |
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39 _DOCKER = False |
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40 |
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41 |
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42 def SetOrthancParameters(local, remote, withinDocker): |
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43 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 44 _LOCAL = local |
| 45 _REMOTE = remote | |
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46 _DOCKER = withinDocker |
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47 |
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48 |
| 14 | 49 def ExtractDicomTags(rawDicom, tags): |
| 50 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 51 f.write(rawDicom) | |
| 52 f.flush() | |
| 45 | 53 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 54 |
| 55 result = [] | |
| 56 for tag in tags: | |
| 57 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 58 if match == None: | |
| 59 result.append('') | |
| 60 else: | |
| 61 result.append(match.group(1)) | |
| 62 | |
| 63 return result | |
| 64 | |
| 65 | |
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66 def CompareLists(a, b): |
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67 if len(a) != len(b): |
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68 return False |
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69 |
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70 for i in range(len(a)): |
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71 d = a[i] - b[i] |
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72 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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73 return False |
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74 |
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75 return True |
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76 |
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77 |
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78 def CompareTags(a, b, tagsToIgnore): |
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79 for i in tagsToIgnore: |
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80 if i in a: |
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81 del a[i] |
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82 if i in b: |
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83 del b[i] |
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84 |
| 123 | 85 if a.keys() == b.keys(): |
| 86 return True | |
| 87 else: | |
| 88 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 89 return False | |
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90 |
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91 |
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92 def CallFindScu(args): |
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93 p = subprocess.Popen([ FindExecutable('findscu'), |
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94 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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95 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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96 stderr=subprocess.PIPE) |
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97 return p.communicate()[1] |
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98 |
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99 |
| 142 | 100 def GetMoveScuCommand(): |
| 101 return [ | |
| 102 FindExecutable('movescu'), | |
| 103 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 104 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 105 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 106 _REMOTE['Server'], | |
| 107 str(_REMOTE['DicomPort']) | |
| 108 ] | |
| 109 | |
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110 |
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111 def IsDicomUntilPixelDataStored(orthanc): |
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112 # This function detects whether the "StorageCompression" option is |
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113 # "true", OR the storage area does not support read-range |
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114 |
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115 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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116 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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117 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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118 if a != 0x03a0: |
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119 raise Exception('Internal error') |
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120 |
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121 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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122 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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123 raise Exception('Internal error') |
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124 |
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125 DoDelete(orthanc, '/instances/%s' % i) |
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126 |
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127 if len(a) == 1: |
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128 return False |
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129 elif 'dicom-until-pixel-data' in a: |
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130 return True |
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131 else: |
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132 raise Exception('Internal error') |
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133 |
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134 else: |
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135 return False |
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136 |
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137 |
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138 def CallMoveScu(args): |
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139 try: |
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140 subprocess.check_call(GetMoveScuCommand() + args, |
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141 stderr = subprocess.PIPE) |
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142 except subprocess.CalledProcessError as e: |
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143 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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144 # that has been introduced in DCMTK 3.6.2. This error code is |
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145 # expected by some tests that try and C-MOVE non-existing |
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146 # DICOM instances. |
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147 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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148 if e.returncode != 69: |
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149 raise e |
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150 |
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151 |
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152 def GenerateTestSequence(): |
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153 return [ |
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154 { |
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155 'StudyDescription': 'Hello^', |
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156 'ReferencedStudySequence' : [ |
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157 { |
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158 'StudyDescription': 'Toto', |
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159 }, |
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160 { |
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161 'StudyDescription': 'Tata', |
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162 }, |
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163 ] |
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164 }, |
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165 { |
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166 'StudyDescription': 'Sébastien^', |
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167 'StudyDate' : '19700202', |
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168 } |
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169 ] |
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170 |
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171 |
| 3 | 172 class Orthanc(unittest.TestCase): |
| 173 def setUp(self): | |
| 83 | 174 if (sys.version_info >= (3, 0)): |
| 175 # Remove annoying warnings about unclosed socket in Python 3 | |
| 176 import warnings | |
| 177 warnings.simplefilter("ignore", ResourceWarning) | |
| 178 | |
| 3 | 179 DropOrthanc(_LOCAL) |
| 180 DropOrthanc(_REMOTE) | |
| 174 | 181 UninstallLuaCallbacks(_REMOTE) |
| 312 | 182 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
|
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183 |
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184 def AssertSameImages(self, truth, url): |
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185 im = GetImage(_REMOTE, url) |
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186 self.assertTrue(CompareLists(truth, im.getdata())) |
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187 |
| 3 | 188 |
| 189 def test_system(self): | |
| 177 | 190 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 191 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 192 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 193 | |
| 194 systemInfo = DoGet(_REMOTE, '/system') | |
| 195 if systemInfo["Version"] == "mainline": | |
| 196 print "Skipping version checks since you're currently in mainline" | |
| 197 return | |
| 198 | |
| 173 | 199 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
| 200 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
| 201 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
| 202 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
| 203 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
| 3 | 204 |
| 205 def test_upload(self): | |
| 173 | 206 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 207 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 208 | |
| 209 sizeDummyCT = 2472 | |
| 210 sizeOverwrite = 2476 | |
| 211 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 212 | |
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213 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 214 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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215 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 216 self.assertEqual(instance, u['ID']) |
| 3 | 217 self.assertEqual('Success', u['Status']) |
| 173 | 218 |
| 183 | 219 if True: |
| 220 # New test for Orthanc 1.4.3 | |
| 221 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 222 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 223 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 224 | |
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225 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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226 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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227 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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228 j = 0 |
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229 else: |
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230 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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231 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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232 |
| 173 | 233 s = sizeDummyCT + j |
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234 |
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235 if isCompressed: |
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236 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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237 else: |
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238 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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239 |
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240 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 241 |
| 3 | 242 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 243 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 244 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 245 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 246 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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247 |
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248 if isCompressed: |
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249 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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250 else: |
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251 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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252 |
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253 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 254 |
| 255 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 256 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 257 self.assertEqual('KNIX', i['PatientName']) |
| 258 | |
| 259 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 260 # Overwriting | |
| 261 self.assertEqual('Success', u['Status']) | |
| 262 else: | |
| 263 self.assertEqual('AlreadyStored', u['Status']) | |
| 264 | |
| 265 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 266 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 267 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 268 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 269 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 270 | |
| 271 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 272 # Overwriting | |
| 273 self.assertEqual('Success', u['Status']) | |
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274 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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275 j2 = 0 |
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276 else: |
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277 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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278 self.assertNotEqual(j, j2) |
| 173 | 279 s2 = sizeOverwrite + j2 |
| 280 self.assertNotEqual(s, s2) | |
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281 if isCompressed: |
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282 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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283 else: |
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284 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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285 |
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286 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 287 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 288 self.assertEqual('ANOTHER', i['PatientName']) | |
| 289 else: | |
| 290 self.assertEqual('AlreadyStored', u['Status']) | |
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291 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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292 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 293 |
| 5 | 294 def test_upload_2(self): |
| 3 | 295 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 296 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 297 self.assertEqual(i, instance['ID']) | |
| 298 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 299 instance['MainDicomTags']['SOPInstanceUID']) | |
| 300 | |
| 301 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 302 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 303 series['MainDicomTags']['SeriesInstanceUID']) | |
| 304 | |
| 305 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 306 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 307 study['MainDicomTags']['StudyInstanceUID']) | |
| 308 | |
| 309 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 310 self.assertEqual('ozp00SjY2xG', | |
| 311 patient['MainDicomTags']['PatientID']) | |
| 312 | |
| 313 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 314 self.assertEqual(2472, len(dicom)) | |
| 315 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 316 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 317 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 318 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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319 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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320 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 321 |
| 322 | |
| 5 | 323 def test_images(self): |
| 324 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 325 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 326 |
| 5 | 327 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 328 self.assertEqual("L", im.mode) | |
| 329 self.assertEqual(512, im.size[0]) | |
| 330 self.assertEqual(358, im.size[1]) | |
| 331 | |
| 332 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 333 self.assertEqual("L", im.mode) | |
| 334 self.assertEqual(512, im.size[0]) | |
| 335 self.assertEqual(358, im.size[1]) | |
| 336 | |
| 337 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 338 self.assertEqual(512, im.size[0]) | |
| 339 self.assertEqual(358, im.size[1]) | |
| 340 | |
| 341 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 342 self.assertEqual("L", im.mode) | |
| 343 self.assertEqual(512, im.size[0]) | |
| 344 self.assertEqual(358, im.size[1]) | |
| 345 | |
| 346 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 347 self.assertEqual("L", im.mode) | |
| 348 self.assertEqual(512, im.size[0]) | |
| 349 self.assertEqual(358, im.size[1]) | |
| 350 | |
| 351 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 352 self.assertEqual(512, im.size[0]) | |
| 353 self.assertEqual(358, im.size[1]) | |
| 64 | 354 |
| 355 # This is Little Endian Explicit | |
| 356 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 357 | |
| 6 | 358 |
| 359 def test_hierarchy(self): | |
| 360 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 361 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 362 UploadFolder(_REMOTE, 'Knee/T1') | |
| 363 UploadFolder(_REMOTE, 'Knee/T2') | |
| 364 | |
| 365 p = DoGet(_REMOTE, '/patients') | |
| 366 s = DoGet(_REMOTE, '/studies') | |
| 367 t = DoGet(_REMOTE, '/series') | |
| 368 self.assertEqual(2, len(p)) | |
| 369 self.assertEqual(2, len(s)) | |
| 370 self.assertEqual(4, len(t)) | |
| 371 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 372 | |
| 373 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 374 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 375 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 376 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 377 | |
| 378 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 379 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 380 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 381 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 382 | |
| 383 self.assertTrue(brainixPatient in p) | |
| 384 self.assertTrue(kneePatient in p) | |
| 385 self.assertTrue(brainixStudy in s) | |
| 386 self.assertTrue(kneeStudy in s) | |
| 387 self.assertTrue(brainixEpi in t) | |
| 388 self.assertTrue(brainixFlair in t) | |
| 389 self.assertTrue(kneeT1 in t) | |
| 390 self.assertTrue(kneeT2 in t) | |
| 391 | |
| 392 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 393 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 394 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 395 | |
| 396 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 397 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 398 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 399 | |
| 400 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 401 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 402 | |
| 403 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 404 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 405 | |
| 406 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 407 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 408 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 409 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 410 | |
| 411 for patient in p: | |
| 412 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 413 self.assertEqual(patient, study['ParentPatient']) | |
| 414 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 415 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 416 self.assertEqual('Unknown', series['Status']) |
| 6 | 417 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 418 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 419 | |
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420 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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421 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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422 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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423 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 424 |
| 425 | |
| 426 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 427 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 428 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 429 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 430 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 431 self.assertEqual(None, r) | |
| 432 | |
| 433 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 434 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 435 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 436 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 437 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 438 self.assertEqual('Study', r['Type']) | |
| 439 self.assertEqual(kneeStudy, r['ID']) | |
| 440 | |
| 441 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 442 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 443 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 444 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 445 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 446 self.assertEqual('Series', r['Type']) | |
| 447 self.assertEqual(kneeT1, r['ID']) | |
| 448 | |
| 449 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 450 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 451 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 452 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 453 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 454 self.assertEqual(None, r) | |
| 455 | |
| 456 DropOrthanc(_REMOTE) | |
| 457 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 458 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 459 |
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460 def test_delete_cascade(self): |
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461 # make sure deleting the last instance of a study deletes the series, study and patient |
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462 |
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463 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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464 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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465 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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466 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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467 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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468 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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469 |
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470 DoDelete(_REMOTE, '/instances/%s' % a) |
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471 |
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472 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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473 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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474 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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475 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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476 |
| 7 | 477 |
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478 def test_multiframe(self): |
| 7 | 479 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 480 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 481 | |
| 482 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 483 self.assertEqual("L", im.mode) | |
| 484 self.assertEqual(512, im.size[0]) | |
| 485 self.assertEqual(512, im.size[1]) | |
| 486 | |
| 487 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 488 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 489 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 490 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 491 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 492 | |
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493 |
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494 def test_changes(self): |
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495 # Check emptiness |
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496 c = DoGet(_REMOTE, '/changes') |
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497 self.assertEqual(0, len(c['Changes'])) |
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498 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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499 self.assertTrue(c['Done']) |
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500 c = DoGet(_REMOTE, '/changes?last') |
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501 self.assertEqual(0, len(c['Changes'])) |
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502 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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503 self.assertTrue(c['Done']) |
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504 |
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505 # Add 1 instance |
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506 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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507 c = DoGet(_REMOTE, '/changes') |
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508 begin = c['Last'] |
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509 self.assertEqual(4, len(c['Changes'])) |
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510 self.assertTrue(c['Done']) |
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511 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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512 |
|
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513 # Check the order in which the creation events are reported |
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514 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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515 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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516 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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517 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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518 |
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519 c = DoGet(_REMOTE, '/changes?last') |
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520 self.assertEqual(1, len(c['Changes'])) |
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521 self.assertEqual(begin, c['Last']) |
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522 self.assertTrue(c['Done']) |
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523 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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524 self.assertEqual(1, len(c['Changes'])) |
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525 self.assertEqual(begin, c['Last']) |
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526 self.assertTrue(c['Done']) |
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527 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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528 self.assertEqual(1, len(c['Changes'])) |
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529 self.assertEqual(begin - 1, c['Last']) |
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530 self.assertFalse(c['Done']) |
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531 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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532 self.assertEqual(1, len(c['Changes'])) |
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533 self.assertEqual(begin - 2, c['Last']) |
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534 self.assertFalse(c['Done']) |
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535 |
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536 UploadFolder(_REMOTE, 'Knee/T1') |
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537 UploadFolder(_REMOTE, 'Knee/T2') |
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538 since = begin |
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539 countPatients = 0 |
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540 countStudies = 0 |
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541 countSeries = 0 |
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542 countInstances = 0 |
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543 completed = 0 |
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544 while True: |
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545 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
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546 since = c['Last'] |
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547 for i in c['Changes']: |
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548 if i['ResourceType'] == 'Instance': |
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549 countInstances += 1 |
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550 if i['ResourceType'] == 'Patient': |
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551 countPatients += 1 |
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552 if i['ResourceType'] == 'Study': |
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553 countStudies += 1 |
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554 if i['ResourceType'] == 'Series': |
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555 countSeries += 1 |
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556 if i['ChangeType'] == 'NewInstance': |
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557 countInstances += 1 |
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558 if i['ChangeType'] == 'NewPatient': |
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559 countPatients += 1 |
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560 if i['ChangeType'] == 'NewStudy': |
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561 countStudies += 1 |
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562 if i['ChangeType'] == 'NewSeries': |
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563 countSeries += 1 |
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564 if i['ChangeType'] == 'CompletedSeries': |
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565 completed += 1 |
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566 self.assertTrue('ID' in i) |
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567 self.assertTrue('Path' in i) |
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568 self.assertTrue('Seq' in i) |
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569 if c['Done']: |
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570 break |
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571 |
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572 self.assertEqual(2 * 50, countInstances) |
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573 self.assertEqual(2 * 1, countPatients) |
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574 self.assertEqual(2 * 1, countStudies) |
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575 self.assertEqual(2 * 2, countSeries) |
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576 self.assertEqual(0, completed) |
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|
577 |
|
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|
578 |
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579 def test_archive(self): |
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580 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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581 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 582 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 583 | |
| 584 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
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585 self.assertEqual(2, len(z.namelist())) |
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586 |
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587 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
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588 self.assertEqual(2, len(z.namelist())) |
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589 |
|
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590 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
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591 self.assertEqual(1, len(z.namelist())) |
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|
592 |
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593 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 594 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 595 | |
| 596 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
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597 self.assertEqual(2, len(z.namelist())) |
| 192 | 598 |
| 599 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 600 'Resources' : [ brainix, knee ] | |
| 601 }) | |
| 602 self.assertEqual(3, len(z.namelist())) | |
|
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603 |
|
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604 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
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605 'Synchronous' : True |
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606 }) |
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607 self.assertEqual(2, len(z.namelist())) |
| 192 | 608 |
|
8
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|
609 |
|
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610 def test_media_archive(self): |
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611 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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612 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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613 |
|
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614 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
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615 self.assertEqual(3, len(z.namelist())) |
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616 self.assertTrue('IMAGES/IM0' in z.namelist()) |
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617 self.assertTrue('IMAGES/IM1' in z.namelist()) |
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618 self.assertTrue('DICOMDIR' in z.namelist()) |
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|
619 |
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620 try: |
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621 os.remove('/tmp/DICOMDIR') |
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|
622 except: |
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623 # The file does not exist |
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624 pass |
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|
625 |
|
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626 z.extract('DICOMDIR', '/tmp') |
| 45 | 627 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
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628 stderr = subprocess.STDOUT).split('\n') |
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629 self.assertEqual(3, len(a)) |
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630 self.assertTrue(a[0].startswith('Warning')) |
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631 self.assertEqual('BasicDirectory', a[1]) |
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632 self.assertEqual('', a[2]) |
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633 |
| 45 | 634 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
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635 stderr = subprocess.STDOUT).split('\n') |
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636 self.assertEqual(1, len(a)) |
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637 self.assertEqual('', a[0]) |
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|
638 |
| 45 | 639 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
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640 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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641 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
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642 |
|
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|
643 os.remove('/tmp/DICOMDIR') |
| 10 | 644 |
| 645 | |
| 646 def test_protection(self): | |
| 647 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 648 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 649 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 650 a = DoGet(_REMOTE, '/patients')[0] | |
| 651 b = DoGet(_REMOTE, '/patients')[1] | |
| 652 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 653 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 654 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 655 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 656 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 657 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 658 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 659 | |
| 660 | |
| 12 | 661 def test_raw_tags(self): |
| 10 | 662 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 663 | |
| 664 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 665 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 666 | |
| 667 s = '/instances/%s/content/' % i | |
| 668 | |
| 669 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 670 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 671 | |
| 672 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 673 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 674 | |
| 675 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 676 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 677 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 678 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 679 | |
| 680 for i in DoGet(_REMOTE, '/instances'): | |
| 681 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 682 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 683 | |
| 684 | |
| 685 def test_raw_tags_mdn(self): | |
| 686 # Bug reported by Cyril Paulus | |
| 687 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 688 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 689 | |
| 690 | |
| 691 def test_modify_instance(self): | |
| 692 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 693 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 694 json.dumps({ | |
| 695 "Replace" : { | |
| 696 "PatientName" : "hello", | |
| 697 #"PatientID" : "world" | |
| 698 }, | |
| 699 "Remove" : [ "StationName" ], | |
|
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700 "RemovePrivateTags" : True |
| 10 | 701 }), |
| 702 'application/json') | |
| 703 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 704 | |
| 705 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 706 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 707 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 708 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 709 | |
| 710 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 711 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 712 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 713 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 714 | |
| 715 | |
| 716 def test_modify_series(self): | |
| 717 # Upload 4 images from the same series | |
| 718 for i in range(4): | |
| 719 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 720 | |
| 721 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 722 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 723 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 724 'application/json')['ID'] | |
| 725 | |
| 726 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 727 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 728 self.assertEqual(4, len(instances)) | |
| 729 for i in instances: | |
| 730 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 731 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 732 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 733 | |
| 734 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 735 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 736 | |
| 737 | |
| 738 def test_modify_study(self): | |
| 739 # Upload 4 images from the 2 series of the same study | |
| 740 for i in range(4): | |
| 741 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 742 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 743 | |
| 744 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 745 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 746 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 747 'application/json')['ID'] | |
| 748 | |
| 749 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 750 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 751 self.assertEqual(2, len(series)) | |
| 752 for s in series: | |
| 753 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 754 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 755 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 756 | |
| 757 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 758 for i in instances: | |
| 759 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 760 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 761 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 762 | |
| 763 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 764 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 765 | |
| 766 | |
| 767 def test_anonymize_series(self): | |
| 768 # Upload 4 images from the same series | |
| 769 for i in range(4): | |
| 770 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 771 | |
| 772 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 773 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 774 '{}', | |
| 775 'application/json')['ID'] | |
| 776 | |
| 777 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 778 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 779 self.assertEqual(4, len(instances)) | |
| 780 for i in instances: | |
| 781 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 782 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 783 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 784 | |
| 785 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 786 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 787 | |
| 788 | |
| 789 def test_anonymize_study(self): | |
| 790 # Upload 4 images from the 2 series of the same study | |
| 791 for i in range(4): | |
| 792 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 793 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 794 | |
| 795 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 796 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 797 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 798 'application/json')['ID'] | |
| 799 | |
| 800 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 801 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 802 self.assertEqual(2, len(series)) | |
| 803 for s in series: | |
| 804 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 805 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 806 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 807 | |
| 808 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 809 for i in instances: | |
| 810 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 811 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 812 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 813 | |
| 814 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 815 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 816 |
| 817 | |
| 818 | |
| 819 def test_storescu(self): | |
| 820 # Check emptiness | |
| 821 e = DoGet(_REMOTE, '/exports') | |
| 822 self.assertEqual(0, len(e['Exports'])) | |
| 823 self.assertEqual(0, e['Last']) | |
| 824 self.assertTrue(e['Done']) | |
| 825 e = DoGet(_REMOTE, '/exports?last') | |
| 826 self.assertEqual(0, len(e['Exports'])) | |
| 827 self.assertEqual(0, e['Last']) | |
| 828 self.assertTrue(e['Done']) | |
| 829 | |
| 830 # Add 1 instance | |
| 831 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 832 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 833 | |
| 834 # Export the instance | |
| 835 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 836 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 837 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 838 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 839 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 840 | |
| 841 e = DoGet(_REMOTE, '/exports') | |
| 842 self.assertEqual(1, len(e['Exports'])) | |
| 843 self.assertTrue(e['Done']) | |
| 844 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 845 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 846 self.assertEqual(1, len(e['Exports'])) | |
| 847 self.assertTrue(e['Done']) | |
| 848 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 849 e = DoGet(_REMOTE, '/exports?last') | |
| 850 self.assertEqual(1, len(e['Exports'])) | |
| 851 self.assertTrue(e['Done']) | |
| 852 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 853 seqInstance = e['Last'] | |
| 854 | |
| 855 # Export the series | |
| 856 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 857 | |
| 858 e = DoGet(_REMOTE, '/exports') | |
| 859 self.assertEqual(2, len(e['Exports'])) | |
| 860 self.assertTrue(e['Done']) | |
| 861 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 862 seqSeries = e['Last'] | |
| 863 self.assertNotEqual(seqInstance, seqSeries) | |
| 864 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 865 self.assertEqual(1, len(e['Exports'])) | |
| 866 self.assertFalse(e['Done']) | |
| 867 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 868 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 869 self.assertEqual(1, len(e['Exports'])) | |
| 870 self.assertTrue(e['Done']) | |
| 871 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 872 e = DoGet(_REMOTE, '/exports?last') | |
| 873 self.assertEqual(1, len(e['Exports'])) | |
| 874 self.assertTrue(e['Done']) | |
| 875 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 876 | |
| 877 # Export the study | |
| 878 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 879 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 880 | |
| 881 # Export the patient | |
| 882 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 883 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 884 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 885 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 886 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 887 | |
| 888 e = DoGet(_REMOTE, '/exports') | |
| 889 self.assertEqual(4, len(e['Exports'])) | |
| 890 self.assertTrue(e['Done']) | |
| 891 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 892 seqPatient = e['Last'] | |
| 893 self.assertNotEqual(seqInstance, seqSeries) | |
| 894 self.assertNotEqual(seqSeries, seqStudy) | |
| 895 self.assertNotEqual(seqStudy, seqPatient) | |
| 896 self.assertTrue(seqInstance < seqSeries) | |
| 897 self.assertTrue(seqSeries < seqStudy) | |
| 898 self.assertTrue(seqStudy < seqPatient) | |
| 899 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 900 self.assertEqual(1, len(e['Exports'])) | |
| 901 self.assertFalse(e['Done']) | |
| 902 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 903 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 904 self.assertEqual(1, len(e['Exports'])) | |
| 905 self.assertFalse(e['Done']) | |
| 906 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 907 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 908 self.assertEqual(1, len(e['Exports'])) | |
| 909 self.assertFalse(e['Done']) | |
| 910 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 911 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 912 self.assertEqual(1, len(e['Exports'])) | |
| 913 self.assertTrue(e['Done']) | |
| 914 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 915 e = DoGet(_REMOTE, '/exports?last') | |
| 916 self.assertEqual(1, len(e['Exports'])) | |
| 917 self.assertTrue(e['Done']) | |
| 918 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 919 | |
| 920 | |
| 921 # Check the content of the logged information | |
| 922 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 923 | |
| 924 if 'PatientID' in e[0]: | |
| 925 # Since Orthanc 0.8.6 | |
| 926 patient = 'PatientID' | |
| 927 study = 'StudyInstanceUID' | |
| 928 series = 'SeriesInstanceUID' | |
| 929 instance = 'SOPInstanceUID' | |
| 930 else: | |
| 931 # Up to Orthanc 0.8.5 | |
| 932 patient = 'PatientId' | |
| 933 study = 'StudyInstanceUid' | |
| 934 series = 'SeriesInstanceUid' | |
| 935 instance = 'SopInstanceUid' | |
| 936 | |
| 937 for k in range(4): | |
| 938 self.assertTrue('Date' in e[k]) | |
| 939 self.assertTrue('Seq' in e[k]) | |
| 940 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 941 | |
| 942 self.assertEqual(10, len(e[0])) | |
| 943 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 944 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 945 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 946 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 947 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 948 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 949 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 950 | |
| 951 self.assertEqual(9, len(e[1])) | |
| 952 self.assertEqual('Series', e[1]['ResourceType']) | |
| 953 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 954 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 955 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 956 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 957 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 958 | |
| 959 self.assertEqual(8, len(e[2])) | |
| 960 self.assertEqual('Study', e[2]['ResourceType']) | |
| 961 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 962 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 963 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 964 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 965 | |
| 966 self.assertEqual(7, len(e[3])) | |
| 967 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 968 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 969 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 970 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 971 | |
| 972 DropOrthanc(_REMOTE) | |
| 973 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 974 | |
| 975 | |
| 976 def test_store_peer(self): | |
| 977 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 978 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 979 | |
| 980 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 981 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 982 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 983 | |
| 984 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 985 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 986 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 987 | |
| 988 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 989 | |
| 990 DropOrthanc(_REMOTE) | |
| 991 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 992 | |
| 993 | |
| 994 def test_bulk_storescu(self): | |
| 995 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 996 | |
| 997 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 998 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 999 | |
| 1000 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1001 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1002 | |
| 1003 DropOrthanc(_LOCAL) | |
| 1004 | |
| 1005 # Send using patient's UUID | |
| 1006 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1007 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1008 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1009 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1010 | |
| 1011 | |
| 1012 def test_color(self): | |
| 1013 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1014 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1015 self.assertEqual("RGB", im.mode) | |
| 1016 self.assertEqual(41, im.size[0]) | |
| 1017 self.assertEqual(41, im.size[1]) | |
| 1018 | |
| 1019 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1020 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1021 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1022 | |
| 1023 | |
| 12 | 1024 def test_faking_ruby_put(self): |
| 1025 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1026 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1027 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1028 a = DoGet(_REMOTE, '/patients')[0] | |
| 1029 b = DoGet(_REMOTE, '/patients')[1] | |
| 1030 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1031 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1032 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1033 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1034 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1035 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1036 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1037 | |
| 1038 | |
| 1039 def test_faking_ruby_delete(self): | |
| 1040 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1041 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1042 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1043 a = DoGet(_REMOTE, '/patients')[0] | |
| 1044 b = DoGet(_REMOTE, '/patients')[1] | |
| 1045 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1046 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1047 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1048 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1049 | |
| 1050 | |
| 1051 def test_faking_google_put(self): | |
| 1052 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1053 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1054 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1055 a = DoGet(_REMOTE, '/patients')[0] | |
| 1056 b = DoGet(_REMOTE, '/patients')[1] | |
| 1057 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1058 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1059 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1060 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1061 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1062 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1063 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1064 | |
| 1065 | |
| 1066 def test_faking_google_delete(self): | |
| 1067 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1068 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1069 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1070 a = DoGet(_REMOTE, '/patients')[0] | |
| 1071 b = DoGet(_REMOTE, '/patients')[1] | |
| 1072 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1073 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1074 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1075 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1076 | |
| 1077 | |
| 1078 def test_lua(self): | |
| 1079 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1080 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1081 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1082 | |
| 1083 | |
| 1084 def test_metadata(self): | |
| 1085 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1086 p = DoGet(_REMOTE, '/patients')[0] | |
| 1087 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1088 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1089 |
| 1090 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
| 1091 self.assertEqual(1, len(m)) | |
| 1092 self.assertEqual('LastUpdate', m[0]) | |
| 1093 | |
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1094 # The lines below failed on Orthanc <= 1.8.2 |
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1095 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1096 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1097 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1098 |
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1099 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
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1100 self.assertEqual(1, len(m)) |
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1101 self.assertEqual('LastUpdate', m[0]) |
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1102 |
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1103 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1104 self.assertEqual(2, len(m)) |
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1105 self.assertTrue('LastUpdate' in m) |
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1106 |
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1107 # New in Orthanc 1.9.0 |
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1108 self.assertTrue('RemoteAET' in m) |
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1109 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1110 |
| 12 | 1111 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
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1112 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1113 self.assertEqual(9, len(m)) |
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1114 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1115 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1116 else: |
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1117 self.assertEqual(8, len(m)) |
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1118 |
| 12 | 1119 self.assertTrue('IndexInSeries' in m) |
| 1120 self.assertTrue('ReceptionDate' in m) | |
| 1121 self.assertTrue('RemoteAET' in m) | |
|
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1122 self.assertTrue('Origin' in m) |
|
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1123 self.assertTrue('TransferSyntax' in m) |
|
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1124 self.assertTrue('SopClassUid' in m) |
| 145 | 1125 self.assertTrue('RemoteIP' in m) |
| 1126 self.assertTrue('HttpUsername' in m) | |
|
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1127 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1128 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1129 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1130 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1131 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1132 |
| 1133 # Play with custom metadata | |
|
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1134 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1135 self.assertEqual('200', headers['status']) |
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1136 self.assertEqual('', body) |
|
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1137 |
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1138 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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1139 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1140 else: |
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1141 self.assertFalse('ETag' in headers) |
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1142 self.assertFalse('etag' in headers) |
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1143 |
| 12 | 1144 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1145 self.assertEqual(2, len(m)) | |
| 1146 self.assertTrue('LastUpdate' in m) | |
| 1147 self.assertTrue('5555' in m) | |
| 1148 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1149 |
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1150 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1151 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1152 'If-Match' : headers['etag'] |
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1153 }) |
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1154 else: |
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1155 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1156 |
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1157 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1158 self.assertEqual('200', headers['status']) |
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1159 self.assertEqual('hello', body) |
|
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1160 |
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1161 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1162 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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|
1163 'If-Match' : headers['etag'] |
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1164 }) |
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1165 else: |
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1166 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1167 |
| 12 | 1168 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
| 1169 self.assertEqual(1, len(m)) | |
| 1170 self.assertTrue('LastUpdate' in m) | |
| 13 | 1171 |
| 1172 | |
| 1173 def test_statistics(self): | |
| 1174 # Upload 16 instances | |
| 1175 for i in range(4): | |
| 1176 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1177 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1178 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1179 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1180 | |
| 1181 s = DoGet(_REMOTE, '/statistics') | |
| 1182 self.assertEqual(16, s['CountInstances']) | |
| 1183 self.assertEqual(2, s['CountPatients']) | |
| 1184 self.assertEqual(2, s['CountStudies']) | |
| 1185 self.assertEqual(4, s['CountSeries']) | |
| 1186 d = int(s['TotalUncompressedSize']) | |
| 1187 | |
| 1188 e = 0 | |
| 1189 for patient in DoGet(_REMOTE, '/patients'): | |
| 1190 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1191 self.assertEqual(8, s['CountInstances']) | |
| 1192 self.assertEqual(1, s['CountStudies']) | |
| 1193 self.assertEqual(2, s['CountSeries']) | |
| 1194 e += int(s['UncompressedSize']) | |
| 1195 | |
| 1196 for study in DoGet(_REMOTE, '/studies'): | |
| 1197 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1198 self.assertEqual(8, s['CountInstances']) | |
| 1199 self.assertEqual(2, s['CountSeries']) | |
| 1200 e += int(s['UncompressedSize']) | |
| 1201 | |
| 1202 for series in DoGet(_REMOTE, '/series'): | |
| 1203 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1204 self.assertEqual(4, s['CountInstances']) | |
| 1205 e += int(s['UncompressedSize']) | |
| 1206 | |
| 1207 self.assertEqual(3 * d, e) | |
| 1208 | |
| 1209 | |
| 1210 def test_custom_attachment(self): | |
|
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1211 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1212 |
| 13 | 1213 patient = DoGet(_REMOTE, '/patients')[0] |
| 1214 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1215 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1216 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1217 | |
| 1218 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1219 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
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1220 |
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1221 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1222 if IsDicomUntilPixelDataStored(_REMOTE): |
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1223 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1224 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
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1225 else: |
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1226 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1227 else: |
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1228 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1229 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1230 |
| 1231 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) | |
| 1232 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1233 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1234 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1235 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1236 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1237 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1238 | |
| 1239 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1240 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1241 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1242 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1243 size + | |
| 1244 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1245 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1246 | |
| 1247 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1248 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1249 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1250 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1251 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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1252 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
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1253 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
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1254 }) |
|
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1255 |
|
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1256 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
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1257 self.assertEqual('200', headers['status']) |
|
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1258 self.assertEqual('world2', body) |
| 13 | 1259 |
| 1260 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
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1261 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
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|
1262 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
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|
1263 }) |
| 13 | 1264 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1265 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1266 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1267 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1268 | |
| 1269 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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1270 |
|
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1271 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1272 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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1273 'If-Match' : headers['etag'] |
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1274 }) |
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1275 else: |
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1276 self.assertFalse('etag' in headers) |
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1277 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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1278 |
| 13 | 1279 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1280 | |
| 1281 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1282 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1283 | |
| 1284 | |
| 1285 def test_incoming_storescu(self): | |
| 1286 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1287 subprocess.check_call([ FindExecutable('storescu'), |
|
44
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1288 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1289 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1290 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1291 | |
|
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1292 i = DoGet(_REMOTE, '/instances') |
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1293 self.assertEqual(1, len(i)) |
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1294 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
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1295 |
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1296 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1297 self.assertEqual(9, len(m)) |
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1298 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1299 else: |
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1300 self.assertEqual(8, len(m)) |
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1301 |
|
63
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1302 self.assertTrue('IndexInSeries' in m) |
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1303 self.assertTrue('ReceptionDate' in m) |
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1304 self.assertTrue('RemoteAET' in m) |
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1305 self.assertTrue('Origin' in m) |
|
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1306 self.assertTrue('TransferSyntax' in m) |
|
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1307 self.assertTrue('SopClassUid' in m) |
| 145 | 1308 self.assertTrue('RemoteIP' in m) |
| 1309 self.assertTrue('CalledAET' in m) | |
|
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1310 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1311 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
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1312 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
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1313 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
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1314 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
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1315 |
|
369
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1316 series = DoGet(_REMOTE, '/series')[0] |
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1317 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1318 self.assertEqual(2, len(m)) |
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1319 self.assertTrue('LastUpdate' in m) |
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1320 self.assertTrue('RemoteAET' in m) |
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1321 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1322 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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1323 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1324 |
| 13 | 1325 |
| 1326 def test_incoming_findscu(self): | |
| 1327 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1328 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1329 | |
| 1330 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1331 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1332 self.assertEqual(2, len(patientNames)) | |
| 1333 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1334 self.assertTrue('Anonymized' in patientNames) | |
| 1335 | |
| 1336 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1337 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1338 self.assertEqual(2, len(series)) | |
| 1339 self.assertTrue('20070208' in series) | |
| 1340 self.assertTrue('19980312' in series) | |
| 1341 | |
|
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1342 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
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diff
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|
1343 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
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diff
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|
1344 self.assertEqual(1, len(series)) |
|
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diff
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|
1345 self.assertTrue('19980312' in series) |
|
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diff
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|
1346 |
| 13 | 1347 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1348 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1349 self.assertEqual(1, len(series)) | |
| 1350 | |
| 1351 # Test the "CaseSentitivePN" flag (false by default) | |
| 1352 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1353 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1354 self.assertEqual(1, len(series)) | |
|
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|
1355 |
| 70 | 1356 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1357 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1358 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1359 self.assertEqual(2, len(studies)) | |
| 1360 self.assertTrue('20070208' in studies) | |
| 1361 self.assertTrue('19980312' in studies) | |
| 1362 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1363 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1364 self.assertEqual(1, len(studies)) | |
| 1365 self.assertTrue('19980312' in studies) | |
| 1366 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1367 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1368 self.assertEqual(1, len(studies)) | |
| 1369 self.assertTrue('19980312' in studies) | |
|
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1370 |
|
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1371 # Test that "Retrieve AE Title (0008,0054)" is present, which |
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1372 # was *not* the case in Orthanc <= 1.7.2 |
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1373 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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1374 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
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1375 self.assertEqual(2, len(instances)) |
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1376 self.assertEqual('ORTHANC', instances[0].strip()) |
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1377 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1378 |
| 1379 | |
|
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1380 def test_incoming_findscu_2(self): |
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1381 # This test fails if "LookupMode_DatabaseOnly" is used |
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1382 # (sequences are not available in this mode, and only main |
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1383 # DICOM tags are returned) |
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1384 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1385 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1386 |
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1387 # Test returning sequence values (only since Orthanc 0.9.5) |
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1388 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1389 sequences = re.findall('\(0008,2112\)', i) |
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1390 self.assertEqual(1, len(sequences)) |
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1391 |
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1392 # Test returning a non-main DICOM tag, |
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1393 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1394 # "MEDPC" in "ColorTestImageJ.dcm" |
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1395 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1396 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1397 self.assertEqual(1, len(tags)) |
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1398 |
|
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1399 |
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1400 def test_incoming_findscu_3(self): |
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1401 # This test fails if "LookupMode_DatabaseOnly" or |
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1402 # "LookupMode_DiskOnAnswer" is used, as |
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1403 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1404 # tag, as thus a constraint cannot be applied to it |
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1405 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1406 |
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1407 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1408 sequences = re.findall('\(0018,1010\)', i) |
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1409 self.assertEqual(1, len(sequences)) |
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1410 |
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1411 |
| 13 | 1412 def test_incoming_movescu(self): |
| 1413 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1414 |
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1415 # No matching patient, so no job is created |
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1416 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1417 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1418 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1419 |
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1420 # 1 Matching patient, track the job |
| 138 | 1421 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1422 '--patient', | |
| 1423 '-k', '0008,0052=PATIENT', | |
| 1424 '-k', 'PatientID=12345678' | |
| 1425 ]))) | |
| 13 | 1426 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1427 | |
| 1428 | |
| 1429 def test_findscu(self): | |
| 1430 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1431 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1432 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1433 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1434 | |
| 1435 # Test the "find-patient" level | |
| 1436 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1437 self.assertEqual(1, len(p)) | |
| 1438 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1439 | |
| 1440 # Test wildcards constraints. The "LO" value representation | |
| 1441 # for PatientID is always case-sensitive, but the "PN" for | |
| 1442 # PatientName might depend on the implementation: | |
| 1443 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1444 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1445 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1446 self.assertEqual(1, len(p)) | |
| 1447 | |
| 1448 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1449 self.assertEqual(1, len(p)) | |
| 1450 | |
| 1451 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1452 self.assertEqual(1, len(p)) | |
| 1453 | |
| 1454 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1455 self.assertEqual(1, len(p)) | |
| 1456 | |
| 1457 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1458 self.assertEqual(0, len(p)) | |
| 1459 | |
| 1460 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1461 self.assertEqual(0, len(p)) | |
| 1462 | |
| 1463 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1464 self.assertEqual(0, len(p)) | |
| 1465 | |
| 1466 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1467 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1468 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1469 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1470 | |
| 1471 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1472 self.assertEqual(2, len(p)) | |
| 1473 | |
| 1474 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1475 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1476 self.assertEqual(1, len(s)) | |
| 1477 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1478 | |
| 1479 # Test range searches | |
| 1480 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1481 'StudyDate' : '-20070101' }) | |
| 1482 self.assertEqual(0, len(t)) | |
| 1483 | |
| 1484 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1485 'StudyDate' : '20090101-' }) | |
| 1486 self.assertEqual(0, len(t)) | |
| 1487 | |
| 1488 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1489 'StudyDate' : '20070101-' }) | |
| 1490 self.assertEqual(1, len(t)) | |
| 1491 | |
| 1492 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1493 'StudyDate' : '-20090101' }) | |
| 1494 self.assertEqual(1, len(t)) | |
| 1495 | |
| 1496 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1497 'StudyDate' : '20070207-20070207' }) | |
| 1498 self.assertEqual(0, len(t)) | |
| 1499 | |
| 1500 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1501 'StudyDate' : '20070208-20070208' }) | |
| 1502 self.assertEqual(1, len(t)) | |
| 1503 | |
| 1504 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1505 'StudyDate' : '20070209-20070209' }) | |
| 1506 self.assertEqual(0, len(t)) | |
| 1507 | |
| 1508 # Test the ModalitiesInStudy tag | |
| 1509 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1510 'PatientID' : 'B9uTHKOZ', | |
| 1511 'ModalitiesInStudy' : 'US' }) | |
| 1512 self.assertEqual(0, len(t)) | |
| 1513 | |
| 1514 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1515 'PatientID' : 'B9uTHKOZ', | |
| 1516 'ModalitiesInStudy' : 'CT' }) | |
| 1517 self.assertEqual(1, len(t)) | |
| 1518 | |
| 1519 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1520 'PatientID' : 'B9uTHKOZ', | |
| 1521 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1522 self.assertEqual(1, len(t)) | |
| 1523 | |
| 1524 # Test the "find-series" level | |
| 1525 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1526 'PatientID' : 'B9uTHKOZ', | |
| 1527 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1528 self.assertEqual(1, len(t)) | |
| 1529 | |
| 1530 # Test "\" separator | |
| 1531 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1532 'PatientID' : 'B9uTHKOZ', | |
| 1533 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1534 'Modality' : 'MR\\CT\\US' }) | |
| 1535 self.assertEqual(1, len(t)) | |
| 1536 | |
| 1537 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1538 'PatientID' : 'B9uTHKOZ', | |
| 1539 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1540 'Modality' : 'MR\\US' }) | |
| 1541 self.assertEqual(0, len(t)) | |
| 1542 | |
| 1543 | |
| 1544 def test_update_modalities(self): | |
| 1545 try: | |
| 1546 DoDelete(_REMOTE, '/modalities/toto') | |
| 1547 except: | |
| 1548 pass | |
| 1549 try: | |
| 1550 DoDelete(_REMOTE, '/modalities/tata') | |
| 1551 except: | |
| 1552 pass | |
| 1553 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1554 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1555 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1556 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1557 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1558 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1559 DoDelete(_REMOTE, '/modalities/tata') |
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1560 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1561 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
|
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1562 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1563 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1564 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1565 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1566 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1567 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1568 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1569 |
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1570 # New in Orthanc 1.8.1 |
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1571 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1572 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1573 |
| 13 | 1574 DoDelete(_REMOTE, '/modalities/toto') |
| 1575 DoDelete(_REMOTE, '/modalities/tata') | |
| 1576 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1577 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1578 | |
| 1579 | |
| 1580 def test_update_peers(self): | |
| 1581 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1582 try: | |
| 1583 DoDelete(_REMOTE, '/peers/toto') | |
| 1584 except: | |
| 1585 pass | |
| 1586 try: | |
| 1587 DoDelete(_REMOTE, '/peers/tata') | |
| 1588 except: | |
| 1589 pass | |
| 1590 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1591 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1592 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1593 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1594 'Username': 'user', | |
| 1595 'Password' : 'pass', | |
| 1596 'RemoteSelf' : 'self' }) | |
| 128 | 1597 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1598 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1599 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1600 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1601 |
| 1602 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1603 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1604 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1605 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1606 else: | |
| 1607 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1608 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1609 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1610 | |
| 128 | 1611 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1612 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1613 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1614 |
| 13 | 1615 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1616 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1617 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1618 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1619 |
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1620 # New in Orthanc 1.8.1 |
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1621 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1622 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1623 |
| 13 | 1624 DoDelete(_REMOTE, '/peers/toto') |
| 1625 DoDelete(_REMOTE, '/peers/tata') | |
| 1626 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1627 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1628 | |
| 1629 | |
| 1630 def test_mesterhazy_modification(self): | |
| 1631 # When I modify a series ( eg. curl | |
| 1632 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1633 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1634 # series is added to a new Study, instead of the existing | |
| 1635 # Study. Fixed in Orthanc 0.7.5 | |
| 1636 | |
| 1637 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1638 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1639 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1640 | |
| 1641 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1642 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1643 | |
| 1644 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1645 | |
| 1646 | |
| 1647 def test_create(self): | |
| 1648 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1649 json.dumps({ | |
| 1650 'PatientName' : 'Jodogne', | |
| 1651 'Modality' : 'CT', | |
| 58 | 1652 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1653 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1654 })) | |
| 1655 | |
| 1656 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1657 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1658 | |
| 1659 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1660 self.assertEqual((5, 5), png.size) | |
| 1661 | |
| 38 | 1662 j = DoGet(_REMOTE, i['Path']) |
| 1663 self.assertEqual('Instance', j['Type']) | |
| 1664 self.assertEqual(j['ID'], i['ID']) | |
| 1665 | |
| 13 | 1666 |
| 1667 def test_pilates(self): | |
| 1668 # "SCU failed error when accessing orthanc with osirix" by | |
| 1669 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1670 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1671 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1672 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1673 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1674 | |
| 1675 | |
| 1676 def test_shared_tags(self): | |
| 1677 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1678 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1679 p = DoGet(_REMOTE, '/patients')[0] | |
| 1680 | |
| 1681 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1682 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1683 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1684 |
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1685 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1686 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1687 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1688 |
| 13 | 1689 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1690 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1691 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1692 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1693 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1694 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1695 | |
| 1696 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1697 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1698 | |
| 1699 | |
| 1700 def test_modules(self): | |
| 1701 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1702 p = DoGet(_REMOTE, '/patients')[0] | |
| 1703 s = DoGet(_REMOTE, '/studies')[0] | |
| 1704 t = DoGet(_REMOTE, '/series')[0] | |
| 1705 | |
| 1706 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1707 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1708 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1709 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1710 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1711 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1712 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1713 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1714 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1715 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1716 | |
| 1717 | |
| 1718 def test_auto_directory(self): | |
| 1719 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1720 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1721 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
|
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1722 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1723 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1724 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1725 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1726 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1727 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1728 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1729 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1730 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1731 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1732 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1733 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1734 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1735 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1736 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1737 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1738 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1739 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1740 |
| 1741 | |
| 1742 def test_echo(self): | |
| 1743 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1744 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1745 |
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1746 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1747 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
|
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1748 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1749 |
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1750 # New in Orthanc 1.8.1 |
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1751 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1752 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1753 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1754 |
| 353 | 1755 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1756 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1757 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1758 'AET' : _REMOTE['DicomAet'], | |
| 1759 'Host' : _REMOTE['Server'], | |
| 1760 'Port' : _REMOTE['DicomPort'], | |
| 1761 'CheckFind' : True | |
| 1762 }) | |
| 1763 | |
| 13 | 1764 |
| 1765 def test_xml(self): | |
| 1766 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1767 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1768 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1769 self.assertEqual(len(items), len(json)) | |
| 1770 | |
| 1771 self.assertTrue('dicom-conformance' in json) | |
| 1772 | |
| 1773 ok = False | |
| 1774 for i in items: | |
| 1775 if i.childNodes[0].data == 'dicom-conformance': | |
| 1776 ok = True | |
| 1777 self.assertTrue(ok) | |
| 1778 | |
| 1779 | |
|
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1780 def test_googlecode_issue_16(self): |
| 13 | 1781 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1782 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1783 self.assertEqual('0018,1063', t) | |
| 1784 | |
| 1785 | |
|
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1786 def test_googlecode_issue_22(self): |
| 13 | 1787 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1788 a = [ | |
| 1789 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1790 "c69eee9a51eea3e8611e82e578897254", | |
| 1791 "315666be83e2d0111c77bc0996d84901", | |
| 1792 "3e27aa959d911172c48a1436443c72b1", | |
| 1793 "958642c9e7e9d232d3869faff546058c", | |
| 1794 "5e7ea8e3e4230cae707d143481355c59", | |
| 1795 "eda37f83558d858a596175aed8b2ad47", | |
| 1796 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1797 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1798 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1799 "e2f39e85896fe58876654b94cd0b5013", | |
| 1800 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1801 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1802 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1803 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1804 "806b8b3e300c615099c11a5ec23465aa", | |
| 1805 "7c836aa298ba6eef96434579af631a11", | |
| 1806 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1807 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1808 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1809 "44e6670f127e612a2b4aa60a0d207698", | |
| 1810 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1811 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1812 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1813 ] | |
| 1814 | |
| 1815 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1816 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1817 | |
| 1818 for i in range(len(a)): | |
| 1819 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1820 | |
| 1821 | |
|
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1822 def test_googlecode_issue_19(self): |
|
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1823 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1824 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1825 | |
| 1826 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1827 if not HasGdcmPlugin(_REMOTE): |
|
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1828 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1829 |
| 1830 | |
|
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1831 def test_googlecode_issue_37(self): |
| 13 | 1832 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1833 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1834 | |
| 1835 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1836 'CaseSensitive' : True, | |
| 1837 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1838 self.assertEqual(1, len(a)) | |
| 14 | 1839 |
| 1840 | |
| 1841 def test_rest_find(self): | |
| 1842 # Upload 8 instances | |
| 1843 for i in range(2): | |
| 1844 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1845 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1846 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1847 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1848 | |
| 1849 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1850 'CaseSensitive' : False, | |
|
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1851 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1852 self.assertEqual(1, len(a)) |
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1853 |
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1854 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1855 'CaseSensitive' : False, |
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1856 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1857 self.assertEqual(2, len(a)) |
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1858 |
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1859 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1860 'CaseSensitive' : False, |
| 14 | 1861 'Query' : { 'PatientName' : '*n*' }}) |
| 1862 self.assertEqual(2, len(a)) | |
| 1863 | |
| 1864 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1865 'CaseSensitive' : True, | |
| 1866 'Query' : { 'PatientName' : '*n*' }}) | |
| 1867 self.assertEqual(0, len(a)) | |
| 1868 | |
| 1869 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1870 'Level' : 'Patient', | |
| 1871 'CaseSensitive' : False, | |
| 1872 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1873 self.assertEqual(1, len(a)) | |
| 1874 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1875 | |
| 1876 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1877 'CaseSensitive' : True, | |
| 1878 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1879 self.assertEqual(0, len(a)) | |
| 1880 | |
| 1881 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1882 'CaseSensitive' : True, | |
| 1883 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1884 self.assertEqual(1, len(a)) | |
| 1885 | |
| 1886 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1887 'CaseSensitive' : True, | |
| 1888 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1889 self.assertEqual(2, len(a)) | |
| 1890 | |
| 1891 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1892 'CaseSensitive' : True, | |
| 1893 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1894 self.assertEqual(4, len(a)) | |
| 1895 | |
| 1896 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1897 self.assertEqual(2, len(a)) | |
| 1898 | |
| 1899 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1900 self.assertEqual(2, len(a)) | |
| 1901 | |
| 1902 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1903 self.assertEqual(4, len(a)) | |
| 1904 | |
| 1905 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1906 self.assertEqual(8, len(a)) | |
| 1907 | |
|
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1908 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1909 'Expand' : True, |
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1910 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1911 self.assertEqual(1, len(a)) |
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1912 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1913 |
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1914 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1915 'Expand' : True, |
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1916 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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1917 self.assertEqual(2, len(a)) |
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1918 for i in range(2): |
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1919 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1920 |
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1921 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1922 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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1923 self.assertEqual(0, len(a)) |
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1924 |
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1925 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1926 'Expand' : True, |
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1927 'Query' : { 'StudyDate' : '-20061201' }}) |
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1928 self.assertEqual(1, len(a)) |
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1929 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1930 |
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1931 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1932 'Expand' : True, |
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1933 'Query' : { 'StudyDate' : '-20051201' }}) |
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1934 self.assertEqual(0, len(a)) |
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1935 |
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1936 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1937 'Expand' : True, |
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1938 'Query' : { 'StudyDate' : '20061201-' }}) |
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1939 self.assertEqual(2, len(a)) |
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1940 for i in range(2): |
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1941 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1942 |
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1943 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1944 'Expand' : True, |
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1945 'Query' : { 'StudyDate' : '20061202-' }}) |
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1946 self.assertEqual(1, len(a)) |
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1947 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1948 |
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1949 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1950 'Expand' : True, |
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1951 'Query' : { 'StudyDate' : '20080819-' }}) |
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1952 self.assertEqual(1, len(a)) |
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1953 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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1954 |
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1955 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1956 'Expand' : True, |
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1957 'Query' : { 'StudyDate' : '20080820-' }}) |
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1958 self.assertEqual(0, len(a)) |
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1959 |
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1960 |
| 14 | 1961 |
| 1962 def test_rest_query_retrieve(self): | |
| 1963 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1964 | |
| 1965 # Upload 8 instances | |
| 1966 for i in range(2): | |
| 1967 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1968 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1969 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1970 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1971 | |
| 1972 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1973 for p in DoGet(_REMOTE, '/patients'): | |
| 1974 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 1975 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 1976 | |
| 1977 for q in DoGet(_REMOTE, '/queries'): | |
| 1978 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 1979 | |
| 1980 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1981 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 1982 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
| 27 | 1983 'Query' : { |
| 1984 'PatientName' : '*NE*', | |
| 1985 'StudyDate' : '*', | |
| 1986 }})['ID'] | |
| 14 | 1987 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
| 1988 | |
| 1989 b = DoGet(_REMOTE, '/queries/%s' % a) | |
| 1990 self.assertTrue('answers' in b) | |
| 1991 self.assertTrue('level' in b) | |
| 1992 self.assertTrue('modality' in b) | |
| 1993 self.assertTrue('query' in b) | |
| 1994 self.assertTrue('retrieve' in b) | |
| 1995 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
| 1996 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
| 1997 | |
| 1998 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
| 27 | 1999 self.assertEqual(2, len(q)) |
| 14 | 2000 self.assertTrue('PatientName' in q) |
| 27 | 2001 self.assertTrue('StudyDate' in q) |
| 14 | 2002 self.assertEqual('*NE*', q['PatientName']) |
| 27 | 2003 self.assertEqual('*', q['StudyDate']) |
| 14 | 2004 |
| 2005 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 2006 | |
| 2007 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
| 2008 self.assertTrue('content' in s) | |
| 2009 self.assertTrue('retrieve' in s) | |
| 2010 | |
| 2011 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
| 2012 self.assertEqual('887', s['PatientID']) | |
| 2013 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
| 2014 | |
| 2015 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2016 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
| 2017 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 2018 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2019 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 2020 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 2021 | |
| 112 | 2022 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
| 14 | 2023 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 2024 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2025 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2026 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 2027 | |
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2028 # New in Orthanc 1.4.3 |
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2029 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2030 self.assertEqual(2, len(s)) |
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2031 for i in range(2): |
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2032 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2033 self.assertEqual('887', s[i]['PatientID']) |
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2034 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2035 |
| 14 | 2036 DoDelete(_REMOTE, '/queries/%s' % a) |
| 2037 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2038 | |
| 2039 | |
| 2040 def test_parent(self): | |
| 2041 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2042 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2043 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2044 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2045 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
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2046 self.assertEqual(instance, u) |
| 14 | 2047 |
| 2048 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2049 self.assertEqual('Patient', a['Type']) | |
| 2050 self.assertEqual(patient, a['ID']) | |
| 2051 | |
| 2052 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2053 self.assertEqual('Patient', a['Type']) | |
| 2054 self.assertEqual(patient, a['ID']) | |
| 2055 | |
| 2056 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2057 self.assertEqual('Study', a['Type']) | |
| 2058 self.assertEqual(study, a['ID']) | |
| 2059 | |
| 2060 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2061 self.assertEqual('Patient', a['Type']) | |
| 2062 self.assertEqual(patient, a['ID']) | |
| 2063 | |
| 2064 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2065 self.assertEqual('Study', a['Type']) | |
| 2066 self.assertEqual(study, a['ID']) | |
| 2067 | |
| 2068 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2069 self.assertEqual('Series', a['Type']) | |
| 2070 self.assertEqual(series, a['ID']) | |
| 2071 | |
| 2072 | |
| 2073 def test_shanon(self): | |
| 2074 def Anonymize(instance, replacements = {}): | |
| 119 | 2075 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2076 'Replace' : replacements, | |
| 2077 'Force' : True, | |
| 2078 }, 'application/json') | |
| 14 | 2079 |
| 2080 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2081 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2082 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2083 | |
| 2084 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2085 ids = [ 'ozp00SjY2xG', | |
| 2086 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2087 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2088 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2089 | |
| 2090 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2091 for i in range(4): | |
| 2092 self.assertNotEqual(ids[i], a[i]) | |
| 2093 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2094 | |
| 2095 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2096 for i in range(4): | |
| 2097 self.assertNotEqual(ids[i], a[i]) | |
| 2098 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2099 | |
| 2100 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2101 self.assertEqual('instance', a[3]) | |
| 2102 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2103 | |
| 2104 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2105 self.assertEqual('series', a[2]) | |
| 2106 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2107 | |
| 2108 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2109 self.assertEqual('study', a[1]) | |
| 2110 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2111 | |
| 2112 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2113 self.assertEqual('patient', a[0]) | |
| 2114 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2115 | |
| 2116 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2117 'StudyInstanceUID' : 'study', | |
| 2118 'SeriesInstanceUID' : 'series', | |
| 2119 'SOPInstanceUID' : 'instance' }), tags) | |
| 2120 self.assertEqual('patient', a[0]) | |
| 2121 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2122 | |
| 2123 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2124 | |
| 2125 | |
| 2126 def test_shanon_2(self): | |
| 2127 def Modify(instance, replacements = {}): | |
| 119 | 2128 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2129 'Replace' : replacements, | |
| 2130 'Force': True, | |
| 2131 }, 'application/json') | |
| 14 | 2132 |
| 2133 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2134 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2135 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2136 | |
| 2137 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2138 ids = [ 'ozp00SjY2xG', | |
| 2139 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2140 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2141 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2142 | |
| 2143 a = ExtractDicomTags(Modify(u), tags) | |
| 2144 self.assertEqual(ids[0], a[0]) | |
| 2145 self.assertEqual(ids[1], a[1]) | |
| 2146 self.assertEqual(ids[2], a[2]) | |
| 2147 self.assertNotEqual(ids[3], a[3]) | |
| 2148 self.assertEqual(0, len(a[4])) | |
| 2149 | |
| 2150 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2151 self.assertEqual(ids[0], a[0]) | |
| 2152 self.assertEqual(ids[1], a[1]) | |
| 2153 self.assertEqual(ids[2], a[2]) | |
| 2154 self.assertEqual('instance', a[3]) | |
| 2155 | |
| 2156 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2157 self.assertEqual(ids[0], a[0]) | |
| 2158 self.assertEqual(ids[1], a[1]) | |
| 2159 self.assertEqual('series', a[2]) | |
| 2160 self.assertNotEqual(ids[3], a[3]) | |
| 2161 | |
| 2162 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2163 self.assertEqual(ids[0], a[0]) | |
| 2164 self.assertEqual('study', a[1]) | |
| 2165 self.assertNotEqual(ids[2], a[2]) | |
| 2166 self.assertNotEqual(ids[3], a[3]) | |
| 2167 | |
| 2168 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2169 self.assertEqual('patient', a[0]) | |
| 2170 self.assertNotEqual(ids[1], a[1]) | |
| 2171 self.assertNotEqual(ids[2], a[2]) | |
| 2172 self.assertNotEqual(ids[3], a[3]) | |
| 2173 | |
| 2174 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2175 'StudyInstanceUID' : 'study', | |
| 2176 'SeriesInstanceUID' : 'series', | |
| 2177 'SOPInstanceUID' : 'instance' }), tags) | |
| 2178 self.assertEqual('patient', a[0]) | |
| 2179 self.assertEqual('study', a[1]) | |
| 2180 self.assertEqual('series', a[2]) | |
| 2181 self.assertEqual('instance', a[3]) | |
| 2182 | |
| 2183 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2184 | |
| 2185 | |
| 2186 def test_instances_tags(self): | |
| 2187 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2188 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2189 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2190 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2191 | |
| 2192 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2193 self.assertEqual(2, len(i)) | |
| 2194 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2195 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2196 | |
| 2197 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2198 self.assertEqual(2, len(i)) | |
| 2199 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2200 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2201 | |
| 2202 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2203 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2204 self.assertEqual(1, len(i)) | |
| 2205 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2206 | |
| 2207 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2208 self.assertEqual(1, len(i)) | |
| 2209 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2210 | |
|
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2211 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2212 self.assertEqual(1, len(i)) |
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2213 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2214 |
| 14 | 2215 |
| 2216 def test_lookup(self): | |
| 2217 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2218 self.assertEqual(0, len(a)) | |
| 2219 | |
| 2220 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2221 | |
| 2222 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2223 self.assertEqual(1, len(a)) | |
| 2224 self.assertEqual('Patient', a[0]['Type']) | |
| 2225 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2226 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2227 | |
| 2228 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2229 self.assertEqual(1, len(a)) | |
| 2230 self.assertEqual('Study', a[0]['Type']) | |
| 2231 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2232 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2233 | |
| 2234 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2235 self.assertEqual(1, len(a)) | |
| 2236 self.assertEqual('Series', a[0]['Type']) | |
| 2237 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2238 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2239 | |
| 2240 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2241 self.assertEqual(1, len(a)) | |
| 2242 self.assertEqual('Instance', a[0]['Type']) | |
| 2243 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2244 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2245 | |
| 2246 DropOrthanc(_REMOTE) | |
| 2247 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2248 self.assertEqual(0, len(a)) | |
| 2249 | |
| 15 | 2250 |
| 2251 def test_autorouting(self): | |
| 2252 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2253 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2254 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2255 | |
| 2256 # Check that this version is >= 0.8.0 | |
| 2257 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2258 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2259 | |
| 2260 UploadInstance(_REMOTE, knee1) | |
| 2261 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2262 | |
| 2263 DropOrthanc(_REMOTE) | |
| 2264 DropOrthanc(_LOCAL) | |
| 174 | 2265 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2266 UploadInstance(_REMOTE, knee1) |
| 2267 UploadInstance(_REMOTE, knee2) | |
| 2268 UploadInstance(_REMOTE, other) | |
| 2269 WaitEmpty(_REMOTE) | |
| 174 | 2270 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2271 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2272 | |
| 2273 DropOrthanc(_REMOTE) | |
| 2274 DropOrthanc(_LOCAL) | |
| 174 | 2275 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2276 UploadInstance(_REMOTE, knee1) |
| 2277 UploadInstance(_REMOTE, knee2) | |
| 2278 UploadInstance(_REMOTE, other) | |
| 2279 WaitEmpty(_REMOTE) | |
| 174 | 2280 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2281 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2282 | |
| 2283 DropOrthanc(_REMOTE) | |
| 2284 DropOrthanc(_LOCAL) | |
| 174 | 2285 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2286 UploadInstance(_REMOTE, knee1) |
| 2287 WaitEmpty(_REMOTE) | |
| 174 | 2288 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2289 i = DoGet(_LOCAL, '/instances') |
| 2290 self.assertEqual(1, len(i)) | |
| 2291 | |
| 2292 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2293 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2294 f.flush() | |
| 45 | 2295 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2296 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2297 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2298 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2299 |
| 2300 | |
| 2301 def test_storescu_rf(self): | |
| 2302 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2303 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2304 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2305 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2306 |
| 2307 | |
| 2308 def test_anonymize_instance(self): | |
| 2309 def AnonymizeAndUpload(instanceId, parameters): | |
| 2310 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2311 'application/json'), 'application/dicom')['ID'] | |
| 2312 | |
| 2313 def ModifyAndUpload(instanceId, parameters): | |
| 2314 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2315 'application/json'), 'application/dicom')['ID'] | |
| 2316 | |
| 2317 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2318 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2319 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2320 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2321 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2322 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2323 | |
| 2324 b = AnonymizeAndUpload(a, '{}') | |
| 2325 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2326 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2327 | |
| 2328 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2329 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2330 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2331 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2332 | |
| 2333 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2334 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2335 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2336 | |
| 2337 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2338 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2339 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2340 | |
| 2341 # Examples from the Wiki | |
|
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2342 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2343 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2344 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2345 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2346 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2347 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2348 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2349 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2350 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2351 | |
|
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2352 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2353 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2354 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2355 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2356 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2357 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2358 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2359 | |
|
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2360 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2361 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2362 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2363 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2364 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2365 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2366 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2367 | |
| 2368 | |
| 2369 # Test modify non-existing | |
| 2370 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2371 json.dumps({ | |
| 2372 'PatientName' : 'Jodogne', | |
| 2373 'Modality' : 'CT', | |
| 2374 }))['ID'] | |
| 2375 | |
| 2376 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2377 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2378 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2379 | |
| 2380 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2381 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2382 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2383 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2384 | |
|
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2385 |
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2386 def test_incoming_jpeg(self): |
|
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2387 def storescu(image, acceptUnknownSopClassUid): |
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2388 if acceptUnknownSopClassUid: |
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2389 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2390 else: |
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2391 tmp = [ '-xs' ] |
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2392 |
|
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2393 with open(os.devnull, 'w') as FNULL: |
|
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2394 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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2395 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
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2396 GetDatabasePath(image) ], |
|
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2397 stderr = FNULL) |
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2398 |
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2399 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2400 |
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2401 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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2402 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
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2403 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
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2404 ]) |
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2405 self.assertTrue('1.2.840.10008.1.2' in a) |
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2406 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2407 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2408 self.assertEqual(3, len(a)) |
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2409 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2410 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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2411 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2412 else: |
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2413 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
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2414 |
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2415 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False)) |
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2416 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True)) |
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2417 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2418 |
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2419 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2420 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
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2421 self.assertGreaterEqual(42, len(a)) |
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2422 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
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2423 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2424 else: |
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2425 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
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2426 |
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2427 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
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2428 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
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changeset
|
2429 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2430 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2431 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2432 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2433 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2434 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2435 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2436 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2437 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2438 | |
| 2439 # This is JPEG lossless | |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2440 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2441 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2442 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2443 |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2444 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2445 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2446 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2447 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2448 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2449 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2450 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2451 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2452 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2453 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2454 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2455 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2456 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2457 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2458 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2459 def test_pixel_data(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2460 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2461 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2462 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2463 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2464 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2465 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2466 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2467 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2468 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2469 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2470 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2471 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2472 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2473 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2474 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2475 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2476 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2477 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2478 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2479 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2480 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2481 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2482 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2483 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2484 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2485 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2486 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2487 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2488 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2489 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2490 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2491 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2492 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2493 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2494 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2495 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2496 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2497 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2498 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2499 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2500 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2501 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2502 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2503 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2504 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2505 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2506 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2507 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2508 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2509 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2510 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2511 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2512 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2513 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2514 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2515 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2516 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2517 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2518 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2519 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2520 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2521 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2522 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2523 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2524 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2525 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2526 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2527 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2528 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2529 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2530 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2531 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2532 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2533 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2534 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2535 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2536 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2537 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2538 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2539 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2540 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2541 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2543 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2544 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2545 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2546 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2547 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2548 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2552 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2568 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2569 |
| 2570 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2571 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
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parents:
89
diff
changeset
|
2572 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2573 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2574 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2575 |
| 22 | 2576 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2577 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2578 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2579 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2580 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2581 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2582 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2583 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2584 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2585 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2586 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2587 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2588 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2589 |
| 314 | 2590 # Back to UTF-8 |
| 2591 self.assertEqual('Utf8', DoPut(_REMOTE, '/tools/default-encoding', 'Utf8')) | |
| 2592 | |
|
92
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
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|
2593 |
| 22 | 2594 def test_encodings(self): |
| 23 | 2595 # Latin-1 (ISO_IR 100) |
| 22 | 2596 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2597 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2598 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2599 |
| 2600 # Latin-2 (ISO_IR 101) | |
| 2601 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2602 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2603 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2604 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2605 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2606 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2607 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2608 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2609 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2610 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2611 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2612 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2613 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2614 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2615 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2616 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2617 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2618 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2619 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2620 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2621 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2622 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2623 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2624 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2625 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2626 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2627 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2628 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2629 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2630 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2631 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2632 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2633 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2634 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2635 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2636 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2637 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2638 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2639 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2640 |
| 174 | 2641 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2642 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2643 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2644 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2645 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2646 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2647 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2648 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
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23
diff
changeset
|
2649 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2650 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2651 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2652 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2653 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2654 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2655 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
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2656 def test_resources_since_limit(self): |
|
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|
2657 # Upload 16 instances |
|
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|
2658 for i in range(4): |
|
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|
2659 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
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|
2660 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
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diff
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|
2661 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
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diff
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|
2662 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
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diff
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|
2663 |
|
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diff
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|
2664 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
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|
2665 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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|
2666 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
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|
2667 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
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|
2668 |
|
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diff
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|
2669 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
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diff
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|
2670 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
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|
2671 |
|
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diff
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|
2672 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
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|
2673 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
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diff
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|
2674 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
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diff
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|
2675 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
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diff
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|
2676 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
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diff
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|
2677 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
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diff
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|
2678 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
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diff
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|
2679 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
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diff
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|
2680 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
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diff
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|
2681 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
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diff
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|
2682 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
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diff
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|
2683 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
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diff
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|
2684 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
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diff
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|
2685 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
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diff
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|
2686 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
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diff
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|
2687 |
|
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diff
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|
2688 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
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diff
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|
2689 s = {} |
|
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diff
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|
2690 since = 0 |
|
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diff
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|
2691 while True: |
|
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diff
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|
2692 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
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diff
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|
2693 if len(t) == 0: |
|
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diff
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|
2694 break |
|
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diff
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|
2695 |
|
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diff
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|
2696 since += len(t) |
|
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diff
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|
2697 for i in t: |
|
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diff
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|
2698 s[i] = None |
|
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diff
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|
2699 |
|
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diff
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|
2700 self.assertEqual(16, len(s)) |
|
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diff
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|
2701 for instance in DoGet(_REMOTE, '/instances'): |
|
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|
2702 self.assertTrue(instance in s) |
| 36 | 2703 |
| 2704 | |
| 2705 def test_create_pdf(self): | |
| 2706 # Upload 4 instances | |
| 2707 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2708 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2709 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2710 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2711 | |
| 2712 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2713 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2714 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2715 | |
| 2716 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2717 pdf = f.read() | |
| 2718 | |
| 2719 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2720 json.dumps({ | |
| 2721 'Tags' : { | |
| 2722 'PatientName' : 'Jodogne', | |
| 2723 'Modality' : 'CT', | |
| 2724 }, | |
| 2725 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2726 })) | |
| 2727 | |
| 2728 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2729 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 2730 | |
| 2731 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2732 self.assertEqual(len(b), len(pdf) + 1) | |
| 2733 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2734 | |
| 2735 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2736 json.dumps({ | |
| 2737 'Parent' : brainixPatient, | |
| 2738 'Tags' : { | |
| 2739 'PatientName' : 'Jodogne', | |
| 2740 } | |
| 2741 }))) | |
| 2742 | |
| 2743 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2744 json.dumps({ | |
| 2745 'Parent' : brainixPatient, | |
| 2746 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2747 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2748 })) | |
| 2749 | |
| 2750 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2751 | |
| 2752 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2753 json.dumps({ | |
| 2754 'Parent' : brainixStudy, | |
| 2755 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2756 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2757 })) | |
| 2758 | |
| 2759 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2760 | |
| 2761 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2762 json.dumps({ | |
| 2763 'Parent' : brainixEpi, | |
| 37 | 2764 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2765 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2766 })) | |
| 2767 | |
| 2768 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2769 | |
| 2770 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2771 self.assertEqual(len(b), len(pdf)) | |
| 2772 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2773 | |
| 2774 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2775 |
| 2776 | |
| 2777 def test_create_series(self): | |
| 2778 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2779 json.dumps({ | |
| 2780 'Tags' : { | |
| 40 | 2781 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2782 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2783 'Modality' : 'CT', |
| 2784 }, | |
| 2785 'Content' : [ | |
| 40 | 2786 { |
| 2787 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2788 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2789 }, | |
| 38 | 2790 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2791 ] | |
| 2792 })) | |
| 2793 | |
| 2794 s = DoGet(_REMOTE, i['Path']) | |
| 2795 self.assertEqual('Series', s['Type']) | |
| 2796 self.assertEqual(s['ID'], i['ID']) | |
| 2797 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2798 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2799 self.assertEqual('Complete', s['Status']) | |
| 40 | 2800 |
| 2801 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2802 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2803 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2804 if 'ImageComments' in a: | |
| 2805 self.assertEqual('Tutu', a['ImageComments']) | |
| 2806 else: | |
| 2807 self.assertEqual('Tutu', b['ImageComments']) | |
| 2808 | |
| 2809 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2810 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2811 'Sébastien Jodogne') | |
| 47 | 2812 |
| 2813 | |
| 2814 def test_create_binary(self): | |
| 2815 binary = ''.join(map(chr, range(256))) | |
| 2816 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2817 tags = { | |
| 2818 'PatientName' : 'Jodogne', | |
| 2819 '8899-8899' : encoded | |
| 2820 } | |
| 2821 | |
| 2822 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2823 json.dumps({ | |
| 266 | 2824 'Tags' : tags, |
| 2825 'PrivateCreator' : 'TestBinary', | |
| 47 | 2826 })) |
| 2827 | |
| 2828 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2829 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2830 | |
| 2831 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2832 json.dumps({ | |
| 2833 'InterpretBinaryTags' : False, | |
| 266 | 2834 'Tags' : tags, |
| 2835 'PrivateCreator' : 'TestBinary', | |
| 47 | 2836 })) |
| 2837 | |
| 2838 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2839 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
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|
2840 |
|
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diff
changeset
|
2841 |
|
e4352463ff74
test_patient_ids_collision
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diff
changeset
|
2842 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
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parents:
47
diff
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|
2843 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
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diff
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|
2844 # same PatientID |
|
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diff
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|
2845 for i in range(3): |
|
e4352463ff74
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diff
changeset
|
2846 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
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diff
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|
2847 |
|
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diff
changeset
|
2848 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
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diff
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|
2849 'Query' : { 'PatientName' : '*' }}) |
|
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diff
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|
2850 self.assertEqual(1, len(a)) |
|
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diff
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|
2851 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
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|
2852 |
|
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diff
changeset
|
2853 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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diff
changeset
|
2854 'CaseSensitive' : True, |
|
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diff
changeset
|
2855 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2856 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2857 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2858 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2859 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2860 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2861 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2862 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2863 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2864 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2865 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2866 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2867 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2868 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2869 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2870 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2871 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2872 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2873 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2874 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2875 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2876 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2877 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2878 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2879 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2880 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2881 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2882 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2883 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2884 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2885 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2886 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2887 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2888 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2889 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2890 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2891 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2892 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2893 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2894 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2895 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2896 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2897 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2898 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2899 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2900 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2901 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2902 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2903 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2904 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2905 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2906 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2907 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2908 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2909 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2910 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2911 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2912 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2913 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2914 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2915 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2916 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2917 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2918 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2919 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2920 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2921 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2922 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2923 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2924 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2925 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2926 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2927 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2928 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2929 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2930 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2931 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2932 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2933 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2934 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2935 }), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2936 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2937 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2938 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2939 |
| 52 | 2940 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 2941 | |
| 2942 | |
| 2943 def test_compression(self): | |
| 2944 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2945 | |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2946 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2947 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2948 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2949 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2950 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2951 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2952 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2953 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2954 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2955 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2956 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2957 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2958 # If "StorageCompression" is enabled in the Orthanc to be |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2959 # tested, uncompress the attachment before running the test |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2960 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
2961 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 2962 |
|
380
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2963 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
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2964 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
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2965 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
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2966 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
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2967 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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2968 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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2969 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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2970 |
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2971 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 2972 self.assertTrue('compress' in ops) |
| 2973 self.assertTrue('uncompress' in ops) | |
| 2974 self.assertTrue('is-compressed' in ops) | |
|
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2975 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
2976 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
2977 |
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|
2978 # Re-compress the attachment |
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2979 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
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2980 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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2981 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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2982 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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2983 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
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2984 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
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2985 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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2986 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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2987 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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2988 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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2989 |
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2990 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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2991 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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2992 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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2993 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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2994 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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2995 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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2996 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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2997 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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2998 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
2999 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3000 |
| 3001 | |
| 3002 def test_ordered_slices(self): | |
| 3003 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3004 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3005 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3006 self.assertEqual('Sequence', o['Type']) | |
| 3007 self.assertEqual(1, len(o['Dicom'])) | |
| 3008 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3009 self.assertEqual(76, len(o['Slices'])) | |
| 3010 for j in range(76): | |
| 3011 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3012 | |
| 68 | 3013 self.assertEqual(1, len(o['SlicesShort'])) |
| 3014 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3015 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3016 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3017 | |
| 53 | 3018 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3019 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3020 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3021 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3022 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3023 | |
| 3024 self.assertEqual('Volume', o['Type']) | |
| 3025 self.assertEqual(3, len(o['Dicom'])) | |
| 3026 self.assertEqual(3, len(o['Slices'])) | |
| 3027 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3028 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3029 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3030 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3031 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3032 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3033 | |
| 68 | 3034 self.assertEqual(3, len(o['SlicesShort'])) |
| 3035 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3036 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3037 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3038 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3039 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3040 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3041 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3042 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3043 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3044 | |
| 53 | 3045 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3046 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3047 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3048 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3049 | |
| 3050 self.assertEqual('Sequence', o['Type']) | |
| 3051 self.assertEqual(2, len(o['Dicom'])) | |
| 3052 self.assertEqual(2, len(o['Slices'])) | |
| 3053 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3054 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3055 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3056 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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|
3057 |
| 68 | 3058 self.assertEqual(2, len(o['SlicesShort'])) |
| 3059 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3060 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3061 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3062 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3063 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3064 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3065 | |
| 3066 | |
|
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|
3067 |
|
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|
3068 def test_incoming_movescu_accession(self): |
|
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|
3069 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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|
3070 |
|
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|
3071 # No matching patient, so no job is created |
|
54
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|
3072 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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|
3073 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
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|
3074 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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changeset
|
3075 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
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|
3076 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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3077 |
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|
3078 # 1 Matching patient, track the job |
| 138 | 3079 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3080 '--study', | |
| 3081 '-k', '0008,0052=STUDY', | |
| 3082 '-k', 'AccessionNumber=A10003245599' | |
| 3083 ]))) | |
|
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3084 |
|
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|
3085 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
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|
3086 |
| 55 | 3087 |
| 3088 def test_dicom_to_json(self): | |
| 3089 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
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|
3090 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
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|
3091 |
|
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|
3092 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
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|
3093 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
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|
3094 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3095 # Tags for compatibility with DCMTK 3.6.0 |
| 3096 'RETIRED_OtherPatientIDs', | |
| 3097 'OtherPatientIDs', | |
| 3098 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
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|
3099 ])) |
| 55 | 3100 |
| 3101 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3102 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
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|
3103 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
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|
3104 ])) |
| 55 | 3105 |
|
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|
3106 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
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|
3107 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
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3108 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
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3109 ])) |
|
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|
3110 |
|
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3111 |
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|
3112 # NB: To get the actual value of the "tags" JSON file, use the |
|
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|
3113 # following command: |
|
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|
3114 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
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changeset
|
3115 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3116 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3117 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3118 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3119 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3120 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3121 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3122 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3123 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3124 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3125 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3126 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3127 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3128 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3129 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3130 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3131 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3132 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3133 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3134 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3135 self.assertEqual(aa, tt) |
| 57 | 3136 |
| 3137 | |
| 3138 def test_batch_archive(self): | |
| 3139 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3140 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3141 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3142 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3143 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3144 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3145 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3146 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3147 | |
| 3148 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3149 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3150 self.assertEqual(0, len(z.namelist())) | |
| 3151 | |
| 3152 # One patient | |
| 3153 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3154 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3155 self.assertEqual(4, len(z.namelist())) | |
| 3156 | |
| 3157 # One patient + twice its study + one series from other patient | |
| 3158 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3159 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3160 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3161 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3162 ]) | |
| 3163 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3164 self.assertEqual(6, len(z.namelist())) | |
| 3165 | |
| 3166 # One patient + one series + one instance | |
| 3167 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3168 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3169 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3170 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3171 ]) | |
| 3172 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3173 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3174 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3175 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3176 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3177 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3178 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3179 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3180 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3181 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3182 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3183 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3184 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3185 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3186 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3187 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3188 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3189 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3190 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3191 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3192 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3193 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3194 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3195 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3196 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3197 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3198 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3199 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3200 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3201 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3202 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3203 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3204 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3205 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3206 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3207 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3208 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3209 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3210 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3211 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3212 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3213 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3214 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3215 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3216 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3217 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3218 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3219 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3220 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3221 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3222 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3223 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3224 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3225 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3226 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3227 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3228 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3229 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3230 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3231 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3232 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3233 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3234 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3235 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3236 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3237 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3238 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3239 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3240 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3241 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3242 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3243 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3244 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3245 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3246 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3247 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3248 os.remove('/tmp/DICOMDIR') |
|
71
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3249 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3250 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3251 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3252 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3253 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3254 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3255 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3256 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3257 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3258 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3259 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3260 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3261 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3262 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3263 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3264 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3265 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3266 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3267 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3268 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3269 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3270 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3271 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3272 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3273 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3274 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3275 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3276 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3277 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3278 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3279 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3280 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3281 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3282 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3283 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3284 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3285 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3286 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3287 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3288 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3289 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3290 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3291 self.assertTrue('PT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3292 self.assertTrue('CT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3293 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3294 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3295 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3296 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents:
175
diff
changeset
|
3297 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3298 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3299 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
48740070cbf1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3300 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
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parents:
70
diff
changeset
|
3301 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3302 def test_decode_transfer_syntax(self): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3303 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3304 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3305 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3306 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3307 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3308 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3309 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3310 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3311 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3312 else: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3313 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3314 self.assertEqual(m, md5) |
|
b89af51797ff
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3315 |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3316 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
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74
diff
changeset
|
3317 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3318 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3319 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
b89af51797ff
test_decode_transfer_syntax
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74
diff
changeset
|
3320 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3321 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3322 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3323 | |
| 3324 # The 3 checks below don't work on big-endian | |
| 3325 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
b89af51797ff
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74
diff
changeset
|
3326 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3327 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3328 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3329 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3330 if not HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
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Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
3331 Check('1.2.840.10008.1.2.4.90', None) |
|
c2144cf4bd83
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diff
changeset
|
3332 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3333 |
| 3334 | |
| 3335 def test_raw_frame(self): | |
| 3336 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3337 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3338 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3339 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3340 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3341 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3342 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3343 | |
| 3344 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3345 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3346 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3347 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3348 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3349 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3350 self.assertEqual("L", im.mode) | |
| 3351 self.assertEqual(512, im.size[0]) | |
| 3352 self.assertEqual(512, im.size[1]) | |
| 3353 | |
| 3354 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3355 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3356 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3357 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3358 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3359 self.assertEqual(69214, len(a)) | |
| 3360 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3361 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3362 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3363 self.assertEqual("RGB", im.mode) | |
| 3364 self.assertEqual(512, im.size[0]) | |
| 3365 self.assertEqual(512, im.size[1]) | |
| 323 | 3366 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3367 self.assertEqual("RGB", im.mode) |
| 3368 self.assertEqual(512, im.size[0]) | |
| 3369 self.assertEqual(512, im.size[1]) | |
| 81 | 3370 |
| 3371 | |
| 3372 | |
| 3373 def test_rest_movescu(self): | |
| 3374 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3375 | |
| 3376 # Upload 4 instances | |
| 3377 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3378 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3379 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3380 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3381 | |
| 3382 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3383 for p in DoGet(_REMOTE, '/patients'): | |
| 3384 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3385 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3386 | |
| 3387 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3388 | |
| 3389 # Upload instance Brainix/Flair/IM-0001-0001.dcm | |
| 3390 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance', | |
| 3391 'Resources' : [ | |
| 3392 { | |
| 3393 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3394 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3395 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', | |
| 3396 } | |
| 3397 ]}) | |
| 3398 | |
| 3399 # Upload series Brainix/Flair/* | |
| 3400 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3401 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3402 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3403 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3404 | |
| 3405 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3406 'Resources' : [ | |
| 3407 { | |
| 3408 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3409 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3410 } | |
| 3411 ]}) | |
| 3412 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3413 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3414 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3415 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3416 | |
| 3417 # Upload series Brainix/Epi/* | |
| 3418 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3419 'Resources' : [ | |
| 3420 { | |
| 3421 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3422 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3423 } | |
| 3424 ]}) | |
| 3425 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3426 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3427 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3428 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3429 | |
| 3430 # Upload study Knee/* | |
| 3431 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3432 'Resources' : [ | |
| 3433 { | |
| 3434 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3435 } | |
| 3436 ]}) | |
| 3437 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3438 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3439 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3440 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3441 | |
| 3442 # Reset | |
| 3443 for p in DoGet(_REMOTE, '/patients'): | |
| 3444 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3445 | |
| 3446 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3447 | |
| 3448 | |
| 3449 # Upload all at once | |
| 3450 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3451 'Resources' : [ | |
| 3452 { | |
| 3453 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3454 }, | |
| 3455 { | |
| 3456 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3457 } | |
| 3458 ]}) | |
| 3459 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3460 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3461 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3462 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3463 | |
|
86
0401ef51f5c1
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parents:
83
diff
changeset
|
3464 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3465 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3466 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3467 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3468 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3469 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3470 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3471 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3472 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3473 |
|
b9adc7d06347
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parents:
379
diff
changeset
|
3474 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
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parents:
379
diff
changeset
|
3475 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3476 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3477 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3478 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3479 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3480 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3481 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3482 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3483 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3484 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3485 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3486 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3487 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3488 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3489 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3490 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3491 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3492 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3493 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3494 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3495 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3496 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3497 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3498 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3499 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3500 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3501 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3502 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3503 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3504 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3505 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3506 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3507 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3508 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3509 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3510 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3511 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3512 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3513 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3514 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3515 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3516 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3517 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3518 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3519 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3520 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3521 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3522 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3523 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3524 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3525 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3526 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3527 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3528 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3529 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3530 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3531 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3532 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3533 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3534 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3535 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3536 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3537 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3538 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3539 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3540 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3541 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3542 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3543 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3544 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3545 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3546 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3547 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3548 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3549 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3550 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3551 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3552 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3553 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3554 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3555 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3556 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3557 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3558 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3559 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3560 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3561 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3562 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3563 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3564 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3565 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3566 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3567 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3568 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3569 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3570 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3571 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3572 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3573 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3574 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3575 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3576 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3577 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3578 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3579 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3580 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3581 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3582 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3583 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3584 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3585 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3586 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3587 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3588 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3589 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3590 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3591 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3592 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3593 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3594 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3595 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3596 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3597 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3598 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3599 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3600 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3601 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3602 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3603 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3604 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3605 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3606 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3607 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3608 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3609 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3610 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3611 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3612 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3613 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3614 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3615 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3616 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3617 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3618 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3619 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3620 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3621 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3622 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3623 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3624 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3625 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3626 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3627 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3628 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3629 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3630 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3631 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3632 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3633 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3634 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3635 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3636 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3637 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3638 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3639 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3640 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3641 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3642 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3643 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3644 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3645 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3646 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3647 |
| 314 | 3648 # Back to UTF-8 |
| 3649 self.assertEqual('Utf8', DoPut(_REMOTE, '/tools/default-encoding', 'Utf8')) | |
| 3650 | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3651 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3652 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3653 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3654 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3655 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3656 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3657 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3658 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3659 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3660 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3661 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3662 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3663 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3664 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3665 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3666 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3667 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3668 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3669 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3670 }, |
| 119 | 3671 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3672 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3673 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3674 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3675 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3676 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3677 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3678 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3679 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3680 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3681 b = instances[0] if instances[1] == a else instances[1] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3682 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3683 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3684 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3685 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3686 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3687 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3688 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3689 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3690 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {}) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3691 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3692 CompareMainDicomTag('hello', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3693 CompareMainDicomTag('world', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3694 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
| 102 | 3695 |
| 104 | 3696 def test_httpClient_lua(self): |
| 3697 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: | |
| 102 | 3698 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua') |
| 3699 | |
| 3700 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3701 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3702 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3703 def test_bitbucket_issue_44(self): |
| 319 | 3704 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3705 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3706 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3707 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3708 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3709 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3710 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3711 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3712 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3713 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3714 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3715 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3716 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3717 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3718 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3719 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3720 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3721 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3722 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3723 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3724 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3725 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3726 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3727 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3728 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3729 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3730 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3731 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3732 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3733 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
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104
diff
changeset
|
3734 self.assertEqual("L", im.mode) |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3735 self.assertEqual(1572, im.size[0]) |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
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104
diff
changeset
|
3736 self.assertEqual(2010, im.size[1]) |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3737 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3738 # This is the key image, with MONOCHROME2. Raw background is |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
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104
diff
changeset
|
3739 # white (255), should be rendered as white (255) |
|
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test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
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104
diff
changeset
|
3740 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3741 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3742 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3743 def test_bitbucket_issue_42(self): |
| 319 | 3744 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3745 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
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107
diff
changeset
|
3746 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3747 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3748 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3749 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3750 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3751 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3752 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3753 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3754 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3755 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3756 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
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107
diff
changeset
|
3757 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3758 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3759 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3760 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3761 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3762 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3763 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3764 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3765 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3766 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3767 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3768 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3769 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3770 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3771 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3772 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3773 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3774 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3775 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3776 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3777 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3778 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3779 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3780 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3781 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3782 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3783 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3784 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3785 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3786 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3787 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3788 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3789 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3790 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3791 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3792 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3793 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3794 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3795 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3796 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3797 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3798 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3799 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3800 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3801 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3802 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3803 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3804 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3805 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3806 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3807 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3808 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3809 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3810 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3811 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3812 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3813 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3814 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3815 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3816 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3817 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3818 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3819 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3820 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3821 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3822 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3823 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3824 # "PHI remaining after anonymization" |
| 319 | 3825 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3826 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3827 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3828 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3829 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3830 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3831 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3832 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3833 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3834 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3835 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3836 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3837 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3838 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3839 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3840 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3841 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3842 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3843 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3844 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3845 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3846 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3847 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3848 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3849 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3850 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3851 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3852 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3853 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3854 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3855 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3856 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3857 self.assertFalse('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3858 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3859 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3860 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3861 t[value['Name']] = value['Value'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3862 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3863 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3864 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
45ebfab035b7
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|
3865 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
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|
3866 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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|
3867 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
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3868 |
|
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test_bitbucket_issue_46
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diff
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|
3869 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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test_bitbucket_issue_46
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diff
changeset
|
3870 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
test_bitbucket_issue_46
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|
3871 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
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|
3872 f.flush() |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3873 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
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diff
changeset
|
3874 stderr = subprocess.STDOUT).split('\n') |
|
118
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test_bitbucket_issue_55
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diff
changeset
|
3875 |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3876 |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3877 def test_bitbucket_issue_55(self): |
|
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|
3878 def Run(modify, query): |
|
a954c535fef6
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parents:
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diff
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|
3879 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
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changeset
|
3880 |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3881 operation = 'modify' if modify else 'anonymize' |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3882 |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3883 self.assertRaises(Exception, lambda: DoPost( |
|
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test_bitbucket_issue_55
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parents:
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diff
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|
3884 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3885 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3886 |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3887 query["Force"] = True |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
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|
3888 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
a954c535fef6
test_bitbucket_issue_55
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changeset
|
3889 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3890 DoDelete(_REMOTE, a) |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3891 |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3892 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3893 |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3894 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3895 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3896 |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3897 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3898 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3899 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3900 |
|
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test_bitbucket_issue_55
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diff
changeset
|
3901 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3902 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
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test_bitbucket_issue_55
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parents:
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diff
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|
3903 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3904 |
|
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test_bitbucket_issue_55
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parents:
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diff
changeset
|
3905 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
117
diff
changeset
|
3906 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
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test_bitbucket_issue_55
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parents:
117
diff
changeset
|
3907 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
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|
3908 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3909 |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3910 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3911 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
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|
3912 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3913 # is set to "false" (default value). |
| 319 | 3914 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
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test_bitbucket_issue_56
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diff
changeset
|
3915 |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3916 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3917 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3918 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3919 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
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|
3920 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
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|
3921 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3922 |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3923 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
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|
3924 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3925 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3926 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3927 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3928 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3929 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3930 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3931 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3932 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3933 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
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diff
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|
3934 |
|
fce08afe6b2d
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119
diff
changeset
|
3935 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
changeset
|
3936 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3937 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3938 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3939 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3940 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3941 |
|
fce08afe6b2d
test_bitbucket_issue_56
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119
diff
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|
3942 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3943 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
changeset
|
3944 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
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119
diff
changeset
|
3945 |
|
fce08afe6b2d
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parents:
119
diff
changeset
|
3946 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
119
diff
changeset
|
3947 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
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parents:
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diff
changeset
|
3948 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
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|
3949 |
| 125 | 3950 |
| 3951 def test_gbk_alias(self): | |
| 3952 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 3953 # This test fails on Orthanc <= 1.3.0 | |
| 3954 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 3955 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 3956 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 3957 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 3958 |
| 3959 | |
| 3960 def test_long_tag(self): | |
| 3961 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 3962 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 3963 | |
| 3964 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3965 self.assertTrue('0018,1020' in tags) | |
| 3966 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 3967 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 3968 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 3969 | |
| 3970 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 3971 self.assertTrue('0018,1020' in tags) | |
| 3972 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 3973 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 3974 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 3975 | |
| 3976 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 3977 self.assertTrue('SoftwareVersions' in tags) | |
| 3978 self.assertEqual(None, tags['SoftwareVersions']) | |
| 3979 self.assertTrue('HeartRate' in tags) | |
| 3980 self.assertEqual(474, int(tags['HeartRate'])) | |
| 3981 | |
| 3982 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 3983 self.assertTrue('SoftwareVersions' in tags) | |
| 3984 self.assertEqual(None, tags['SoftwareVersions']) | |
| 3985 | |
| 3986 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 3987 self.assertTrue('SoftwareVersions' in tags) | |
| 3988 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 3989 | |
| 3990 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 3991 self.assertTrue('SoftwareVersions' in tags) | |
| 3992 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 3993 | |
| 3994 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 3995 self.assertEqual(1, len(tags)) | |
| 3996 self.assertTrue(i in tags.keys()) | |
| 3997 self.assertTrue('0018,1020' in tags[i]) | |
| 3998 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 3999 | |
| 4000 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4001 self.assertEqual(1, len(tags)) | |
| 4002 self.assertTrue(i in tags.keys()) | |
| 4003 self.assertTrue('0018,1020' in tags[i]) | |
| 4004 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4005 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4006 | |
|
127
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diff
changeset
|
4007 |
|
1eea4d3a1ba9
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4008 def test_extended_media(self): |
|
1eea4d3a1ba9
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parents:
126
diff
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|
4009 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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diff
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|
4010 |
|
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diff
changeset
|
4011 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4012 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4013 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4014 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4015 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4016 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4017 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4018 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4019 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4020 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4021 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4022 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4023 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4024 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4025 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4026 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4027 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4028 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4029 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4030 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4031 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4032 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4033 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4034 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4035 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4036 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4037 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4038 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4039 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4040 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4041 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4042 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4043 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4044 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4045 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4046 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4047 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4048 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4049 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4050 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4051 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4052 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4053 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4054 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4055 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4056 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4057 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4058 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4059 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4060 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4061 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4062 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4063 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4064 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4065 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4066 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4067 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4068 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4069 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4070 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4071 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4072 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4073 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4074 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4075 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4076 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4077 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4078 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4079 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4080 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4081 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4082 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4083 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4084 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4085 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4086 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4087 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4088 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4089 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4090 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4091 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4092 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4093 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4094 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4095 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4096 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4097 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4098 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4099 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4100 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4101 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4102 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4103 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4104 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4105 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4106 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4107 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4108 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4109 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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parents:
130
diff
changeset
|
4110 a1 = a[0]['ID'] |
|
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diff
changeset
|
4111 a2 = a[1]['ID'] |
|
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130
diff
changeset
|
4112 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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diff
changeset
|
4113 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
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diff
changeset
|
4114 self.assertEqual(2, len(b)) |
|
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parents:
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diff
changeset
|
4115 b1 = b[0]['ID'] |
|
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parents:
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diff
changeset
|
4116 b2 = b[1]['ID'] |
|
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parents:
130
diff
changeset
|
4117 |
|
149144d854bb
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parents:
130
diff
changeset
|
4118 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
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parents:
130
diff
changeset
|
4119 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
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130
diff
changeset
|
4120 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
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diff
changeset
|
4121 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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parents:
130
diff
changeset
|
4122 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
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parents:
130
diff
changeset
|
4123 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
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parents:
130
diff
changeset
|
4124 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
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parents:
130
diff
changeset
|
4125 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
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parents:
130
diff
changeset
|
4126 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
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parents:
130
diff
changeset
|
4127 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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parents:
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diff
changeset
|
4128 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
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parents:
130
diff
changeset
|
4129 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4130 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4131 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4132 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4133 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4134 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4135 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
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Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4136 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4137 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4138 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4139 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4140 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4141 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4142 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4143 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4144 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4145 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4146 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4147 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4148 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4149 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4150 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4151 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4152 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4153 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4154 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4155 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4156 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4157 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4158 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4159 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4160 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4161 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4162 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4163 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4164 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4165 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4166 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4167 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4168 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4169 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4170 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4171 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4172 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4173 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4174 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4175 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4176 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4177 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4178 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4179 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4180 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4181 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4182 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4183 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4184 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4185 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4186 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4187 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4188 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4189 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4190 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4191 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4192 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4193 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4194 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4195 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4196 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4197 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4198 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4199 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4200 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4201 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4202 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4203 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4204 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
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changeset
|
4205 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
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test_bitbucket_issue_94
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changeset
|
4206 |
|
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test_bitbucket_issue_94
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changeset
|
4207 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
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test_bitbucket_issue_94
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changeset
|
4208 |
|
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test_bitbucket_issue_94
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changeset
|
4209 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
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|
4210 self.assertEqual(1, len(a)) |
|
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|
4211 |
|
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test_bitbucket_issue_94
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changeset
|
4212 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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changeset
|
4213 self.assertEqual(1, len(b)) |
|
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test_bitbucket_issue_94
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changeset
|
4214 |
|
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test_bitbucket_issue_94
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changeset
|
4215 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
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test_bitbucket_issue_94
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changeset
|
4216 self.assertEqual(1, len(c)) |
|
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test_bitbucket_issue_94
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changeset
|
4217 |
|
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test_bitbucket_issue_94
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changeset
|
4218 self.assertEqual(a, b) # Modified DICOM |
|
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test_bitbucket_issue_94
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changeset
|
4219 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
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test_metadata_origin
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diff
changeset
|
4220 |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4221 |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4222 def test_metadata_origin(self): |
|
28d50ffac07d
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|
4223 # Upload using the REST API |
|
144
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changeset
|
4224 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
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4225 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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changeset
|
4226 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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test_metadata_origin
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changeset
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4227 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4228 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4229 |
| 4230 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4231 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4232 | |
|
144
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changeset
|
4233 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
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changeset
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4234 self.assertEqual('RestApi', m['Origin']) |
|
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changeset
|
4235 self.assertEqual('', m['RemoteAET']) |
|
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changeset
|
4236 self.assertNotEqual('', m['RemoteIP']) |
|
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changeset
|
4237 self.assertFalse('CalledAET' in m) |
| 315 | 4238 self.assertTrue('HttpUsername' in m) |
| 4239 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
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changeset
|
4240 |
|
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testing metadata?expand
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diff
changeset
|
4241 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
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testing metadata?expand
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diff
changeset
|
4242 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
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testing metadata?expand
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changeset
|
4243 self.assertEqual('1', m['IndexInSeries']) |
|
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changeset
|
4244 self.assertTrue('ReceptionDate' in m) |
|
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testing metadata?expand
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diff
changeset
|
4245 |
|
143
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test_metadata_origin
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changeset
|
4246 DoDelete(_REMOTE, '/instances/%s' % i) |
|
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test_metadata_origin
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changeset
|
4247 |
|
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test_metadata_origin
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changeset
|
4248 # Upload using the DICOM protocol |
|
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changeset
|
4249 subprocess.check_call([ FindExecutable('storescu'), |
|
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changeset
|
4250 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
144
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changeset
|
4251 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
|
7809fdf8056f
testing metadata?expand
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changeset
|
4252 '-xw' ]) # Propose JPEG2000 |
|
143
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test_metadata_origin
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changeset
|
4253 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
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test_metadata_origin
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changeset
|
4254 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4255 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4256 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
|
28d50ffac07d
test_metadata_origin
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changeset
|
4257 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
144
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testing metadata?expand
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diff
changeset
|
4258 |
|
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testing metadata?expand
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diff
changeset
|
4259 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
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testing metadata?expand
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diff
changeset
|
4260 self.assertEqual('DicomProtocol', m['Origin']) |
|
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testing metadata?expand
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diff
changeset
|
4261 self.assertEqual('STORESCU', m['RemoteAET']) |
|
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testing metadata?expand
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diff
changeset
|
4262 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4263 self.assertEqual('ANY-SCP', m['CalledAET']) |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4264 self.assertFalse('HttpUsername' in m) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4265 |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4266 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
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testing metadata?expand
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143
diff
changeset
|
4267 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
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testing metadata?expand
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diff
changeset
|
4268 self.assertEqual('1', m['IndexInSeries']) |
|
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testing metadata?expand
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parents:
143
diff
changeset
|
4269 self.assertTrue('ReceptionDate' in m) |
| 147 | 4270 |
| 4271 | |
| 4272 def test_lua_deadlock(self): | |
| 4273 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4274 # is with the lua script I'm using for conversion of images to | |
| 4275 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4276 # instance appears to be stored and then everything just | |
| 4277 # halts, ie Orthanc wont respond to anything after that." | |
| 4278 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4279 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4280 |
| 4281 subprocess.check_call([ FindExecutable('storescu'), | |
| 4282 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4283 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4284 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4285 ]) | |
| 4286 | |
| 4287 instances = DoGet(_REMOTE, '/instances') | |
| 4288 self.assertEqual(2, len(instances)) | |
| 4289 | |
| 4290 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4291 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4292 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4293 self.assertEqual(t1, t2); |
|
154
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4294 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4295 |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4296 def test_find_group_length(self): |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4297 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4298 # one of the Generic Group Length tags (*, 0x0000) |
|
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4299 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4300 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4301 self.assertFalse('UnableToProcess' in result) |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4302 self.assertFalse('E:' in result) |
|
179
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diff
changeset
|
4303 |
|
8a2dd77d4035
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177
diff
changeset
|
4304 |
|
8a2dd77d4035
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diff
changeset
|
4305 def test_split(self): |
|
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diff
changeset
|
4306 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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diff
changeset
|
4307 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
254
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diff
changeset
|
4308 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
|
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test generation of sopinstanceuid in split/merge
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diff
changeset
|
4309 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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diff
changeset
|
4310 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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diff
changeset
|
4311 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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diff
changeset
|
4312 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
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diff
changeset
|
4313 |
|
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diff
changeset
|
4314 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
changeset
|
4315 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
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diff
changeset
|
4316 |
|
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diff
changeset
|
4317 info = DoGet(_REMOTE, '/studies/%s' % study) |
|
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diff
changeset
|
4318 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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diff
changeset
|
4319 |
|
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diff
changeset
|
4320 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
4321 (_REMOTE, '/studies/%s/split' % study, { |
|
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diff
changeset
|
4322 'Series' : [ t2 ], |
|
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diff
changeset
|
4323 'Replace' : { 'PatientName' : 'Hello' }, |
|
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diff
changeset
|
4324 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4325 'KeepSource' : False, |
| 4326 'Asynchronous' : True | |
|
179
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changeset
|
4327 })) |
|
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diff
changeset
|
4328 |
|
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diff
changeset
|
4329 self.assertNotEqual(None, job) |
|
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diff
changeset
|
4330 |
|
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diff
changeset
|
4331 studies = set(DoGet(_REMOTE, '/studies')) |
|
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changeset
|
4332 self.assertEqual(2, len(studies)) |
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|
4333 |
|
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|
4334 series = set(DoGet(_REMOTE, '/series')) |
|
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|
4335 self.assertEqual(2, len(series)) |
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|
4336 self.assertTrue(t1 in series) |
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|
4337 |
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|
4338 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4339 self.assertTrue(study in studies) |
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|
4340 self.assertTrue(study2 in studies) |
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|
4341 |
|
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|
4342 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4343 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4344 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4345 |
|
254
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|
4346 sopInstanceUids = set() |
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|
4347 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4348 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4349 |
|
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|
4350 self.assertTrue(knee1Sop in sopInstanceUids) |
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|
4351 |
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|
4352 # Fails if Orthanc <= 1.5.7 |
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4353 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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|
4354 |
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4355 # One original instance is kept, another one is added because of the split |
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|
4356 self.assertEqual(2, len(sopInstanceUids)) |
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|
4357 |
|
179
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|
4358 |
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|
4359 def test_merge(self): |
|
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|
4360 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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|
4361 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
4362 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4363 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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|
4364 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4365 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
4366 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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|
4367 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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|
4368 |
|
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|
4369 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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|
4370 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4371 |
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|
4372 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
4373 (_REMOTE, '/studies/%s/merge' % knee, { |
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|
4374 'Resources' : [ brainix ], |
| 181 | 4375 'KeepSource' : True, |
| 4376 'Synchronous' : False | |
|
179
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|
4377 })) |
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|
4378 |
|
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|
4379 self.assertNotEqual(None, job) |
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|
4380 |
|
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|
4381 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4382 self.assertEqual(2, len(studies)) |
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|
4383 self.assertTrue(knee in studies) |
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|
4384 self.assertTrue(brainix in studies) |
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changeset
|
4385 |
|
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changeset
|
4386 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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|
4387 self.assertTrue(t1 in series) |
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|
4388 series.remove(t1) |
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|
4389 self.assertEqual(1, len(series)) |
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changeset
|
4390 |
|
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changeset
|
4391 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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|
4392 self.assertEqual(1, len(instances)) |
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|
4393 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4394 |
|
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diff
changeset
|
4395 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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|
4396 self.assertEqual(1, len(instances)) |
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|
4397 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4398 |
|
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changeset
|
4399 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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changeset
|
4400 self.assertEqual(1, len(instances)) |
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|
4401 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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changeset
|
4402 |
|
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changeset
|
4403 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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changeset
|
4404 |
|
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changeset
|
4405 for key in tags['PatientMainDicomTags']: |
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|
4406 self.assertEqual(a[key], merged[key]) |
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|
4407 if (key in b and key != 'PatientSex'): |
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|
4408 self.assertNotEqual(a[key], b[key]) |
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|
4409 |
|
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changeset
|
4410 for key in tags['MainDicomTags']: |
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|
4411 # Not in the patient/study module |
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|
4412 if (not key in [ 'InstitutionName', |
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|
4413 'RequestingPhysician', |
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|
4414 'RequestedProcedureDescription', ]): |
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|
4415 self.assertEqual(a[key], merged[key]) |
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|
4416 if (key in b): |
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|
4417 self.assertNotEqual(a[key], b[key]) |
|
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|
4418 |
|
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|
4419 sopInstanceUids = set() |
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|
4420 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4421 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4422 |
|
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|
4423 self.assertTrue(kneeSop in sopInstanceUids) |
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|
4424 self.assertTrue(brainixSop in sopInstanceUids) |
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|
4425 |
|
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|
4426 # Fails if Orthanc <= 1.5.7 |
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|
4427 # The 2 original instances are kept, another one is added because of the merge |
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|
4428 self.assertEqual(3, len(sopInstanceUids)) |
|
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4429 |
| 187 | 4430 |
| 4431 def test_async_archive(self): | |
| 4432 # Testing the asynchronous generation of archives/medias (new | |
| 4433 # in Orthanc 1.4.3) | |
| 4434 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4435 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4436 | |
| 4437 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4438 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4439 | |
| 4440 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 4441 (_REMOTE, '/studies/%s/archive' % kneeT1, { | |
| 4442 'Synchronous' : False | |
| 4443 })) | |
| 4444 | |
| 4445 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4446 self.assertEqual(1, len(z.namelist())) | |
| 4447 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4448 | |
|
354
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|
4449 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4450 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4451 self.assertEqual(1, info['Content']['InstancesCount']) |
|
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|
4452 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4453 |
| 187 | 4454 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 4455 (_REMOTE, '/studies/%s/media' % kneeT1, { | |
| 4456 'Synchronous' : False | |
| 4457 })) | |
| 4458 | |
| 4459 # The archive from the first job has been replaced by the | |
| 4460 # archive from second job (as MediaArchiveSize == 1) | |
| 4461 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4462 | |
| 4463 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4464 self.assertEqual(2, len(z.namelist())) | |
| 4465 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4466 | |
|
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|
4467 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4468 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4469 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4470 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4471 |
| 187 | 4472 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4473 (_REMOTE, '/tools/create-archive', { | |
| 4474 'Synchronous' : False, | |
| 4475 'Resources' : [ kneeT1, kneeT2 ], | |
| 4476 })) | |
| 4477 | |
| 4478 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4479 self.assertEqual(2, len(z.namelist())) | |
| 4480 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4481 | |
|
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|
4482 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4483 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4484 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4485 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4486 |
| 187 | 4487 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4488 (_REMOTE, '/tools/create-media', { | |
| 4489 'Synchronous' : False, | |
| 4490 'Resources' : [ kneeT1, kneeT2 ], | |
| 4491 })) | |
| 4492 | |
| 4493 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4494 self.assertEqual(3, len(z.namelist())) | |
| 4495 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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|
4496 |
|
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|
4497 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4498 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4499 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4500 |
| 187 | 4501 |
|
188
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4502 def test_queries_hierarchy(self): |
|
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4503 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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4504 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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4505 |
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|
4506 tags = { |
|
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4507 'NumberOfPatientRelatedInstances' : '', |
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4508 'NumberOfPatientRelatedSeries' : '', |
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4509 'NumberOfPatientRelatedStudies' : '', |
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|
4510 'NumberOfStudyRelatedInstances' : '', |
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changeset
|
4511 'NumberOfStudyRelatedSeries' : '', |
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|
4512 'NumberOfSeriesRelatedInstances' : '', |
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4513 } |
|
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|
4514 |
|
189
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test_dicom_disk_size
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diff
changeset
|
4515 tags2 = copy.copy(tags) |
|
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test_dicom_disk_size
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diff
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|
4516 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
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|
4517 |
|
188
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4518 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
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4519 'Level' : 'Patient', |
|
189
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|
4520 'Query' : tags2 |
|
188
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|
4521 }) ['ID'] |
|
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4522 |
|
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|
4523 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
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changeset
|
4524 'Level' : 'Study', |
|
189
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changeset
|
4525 'Query' : tags2 |
|
188
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changeset
|
4526 }) ['ID'] |
|
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|
4527 |
|
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changeset
|
4528 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
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changeset
|
4529 'Level' : 'Series', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4530 'Query' : tags2 |
|
188
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changeset
|
4531 }) ['ID'] |
|
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changeset
|
4532 |
|
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changeset
|
4533 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
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changeset
|
4534 'Level' : 'Instance', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4535 'Query' : tags2 |
|
188
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changeset
|
4536 }) ['ID'] |
|
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|
4537 |
|
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new test: test_queries_hierarchy
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diff
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|
4538 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
|
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diff
changeset
|
4539 self.assertEqual(1, len(p)) |
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|
4540 self.assertEqual('887', p[0]['PatientID']) |
|
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diff
changeset
|
4541 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
|
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diff
changeset
|
4542 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
|
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diff
changeset
|
4543 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
|
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diff
changeset
|
4544 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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diff
changeset
|
4545 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
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diff
changeset
|
4546 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
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diff
changeset
|
4547 |
|
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diff
changeset
|
4548 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
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diff
changeset
|
4549 self.assertEqual(1, len(p)) |
|
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diff
changeset
|
4550 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
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diff
changeset
|
4551 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
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diff
changeset
|
4552 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
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diff
changeset
|
4553 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
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diff
changeset
|
4554 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
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diff
changeset
|
4555 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
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diff
changeset
|
4556 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
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|
4557 |
|
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diff
changeset
|
4558 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
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changeset
|
4559 self.assertEqual(1, len(p)) |
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changeset
|
4560 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
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diff
changeset
|
4561 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
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diff
changeset
|
4562 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
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changeset
|
4563 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
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changeset
|
4564 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
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diff
changeset
|
4565 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
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changeset
|
4566 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
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changeset
|
4567 |
|
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changeset
|
4568 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
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changeset
|
4569 self.assertEqual(1, len(p)) |
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changeset
|
4570 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
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changeset
|
4571 |
|
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changeset
|
4572 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
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|
4573 { 'Query' : tags }) ['ID'] |
|
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changeset
|
4574 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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changeset
|
4575 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
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|
4576 |
|
188
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|
4577 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
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|
4578 { 'Query' : tags }) ['ID'] |
|
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|
4579 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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|
4580 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
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changeset
|
4581 |
|
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diff
changeset
|
4582 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4583 { 'Query' : tags }) ['ID'] |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4584 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4585 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4586 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4587 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4588 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
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diff
changeset
|
4589 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4590 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4591 |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4592 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4593 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
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diff
changeset
|
4594 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4595 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4596 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4597 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4598 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
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diff
changeset
|
4599 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4600 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4601 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4602 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4603 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4604 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4605 |
|
379
097329b67509
fix tests if StorageCompression is true
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diff
changeset
|
4606 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
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fix tests if StorageCompression is true
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diff
changeset
|
4607 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4608 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4609 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
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188
diff
changeset
|
4610 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4611 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4612 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4613 |
|
11719f19bd62
test_dicom_disk_size
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188
diff
changeset
|
4614 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4615 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
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parents:
188
diff
changeset
|
4616 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
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parents:
188
diff
changeset
|
4617 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
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diff
changeset
|
4618 |
|
189
11719f19bd62
test_dicom_disk_size
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parents:
188
diff
changeset
|
4619 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4620 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4621 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
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378
diff
changeset
|
4622 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
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fix tests if StorageCompression is true
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378
diff
changeset
|
4623 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4624 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4625 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4626 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4627 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4628 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4629 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4630 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
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parents:
379
diff
changeset
|
4631 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4632 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4633 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
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379
diff
changeset
|
4634 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
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diff
changeset
|
4635 # attachment in addition to the DICOM file |
|
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parents:
379
diff
changeset
|
4636 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
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379
diff
changeset
|
4637 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4638 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4639 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4640 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4641 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4642 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4643 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4644 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4645 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4646 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4647 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4648 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4649 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
4650 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4651 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4652 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4653 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4654 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
4655 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4656 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4657 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4658 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4659 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4660 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4661 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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195
diff
changeset
|
4662 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4663 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4664 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4665 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4666 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4667 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4668 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4669 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4670 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4671 c = DoGet(_REMOTE, '/changes') |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4672 self.assertEqual(4, len(c['Changes'])) |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4673 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4674 self.assertEqual(seq + 4, c['Last']) |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4675 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4676 c = DoGet(_REMOTE, '/changes?last') |
|
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test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4677 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4678 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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diff
changeset
|
4679 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4680 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4681 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4682 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4683 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4684 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4685 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4686 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4687 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4688 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4689 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4690 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4691 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4692 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4693 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4694 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4695 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4696 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4697 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4698 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4699 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4700 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4701 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4702 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4703 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4704 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4705 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4706 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4707 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4708 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4709 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4710 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4711 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4712 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4713 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4714 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4715 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4716 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4717 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4718 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4719 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4720 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4721 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4722 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4723 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4724 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4725 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4726 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4727 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4728 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4729 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4730 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4731 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4732 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4733 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4734 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4735 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4736 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4737 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4738 z = GetArchive(_REMOTE, '/patients/%s/media' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4739 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4740 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4741 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4742 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4743 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4744 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4745 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4746 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4747 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4748 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4749 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4750 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4751 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4752 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4753 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4754 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4755 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4756 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4757 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4758 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4759 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4760 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4761 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4762 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4763 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4764 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4765 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4766 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4767 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4768 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4769 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4770 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4771 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4772 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4773 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4774 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4775 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4776 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4777 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4778 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4779 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4780 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4781 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4782 def test_rest_modalities_in_study(self): |
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4783 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
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4784 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
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4785 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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4786 |
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4787 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4788 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
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4789 self.assertEqual(0, len(a)) |
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4790 |
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4791 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4792 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
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4793 self.assertEqual(1, len(a)) |
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4794 |
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4795 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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4796 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
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4797 self.assertEqual(1, len(a)) |
| 211 | 4798 |
| 4799 | |
| 4800 def test_series_status(self): | |
| 4801 def HasCompletedInChanges(): | |
| 4802 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 4803 if c['ChangeType'] == 'CompletedSeries': | |
| 4804 return True; | |
| 4805 | |
| 4806 return False | |
| 4807 | |
| 4808 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 4809 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 4810 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4811 self.assertFalse(HasCompletedInChanges()) | |
| 4812 | |
| 4813 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 4814 | |
| 4815 for i in range(3): | |
| 4816 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 4817 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4818 self.assertFalse(HasCompletedInChanges()) | |
| 4819 | |
| 4820 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 4821 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4822 self.assertTrue(HasCompletedInChanges()) | |
| 4823 | |
| 4824 DoDelete(_REMOTE, '/changes') | |
| 4825 self.assertFalse(HasCompletedInChanges()) | |
| 4826 | |
| 4827 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 4828 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4829 self.assertFalse(HasCompletedInChanges()) | |
| 4830 | |
| 215 | 4831 |
| 4832 def test_dicomweb(self): | |
| 4833 def Compare(dicom, reference): | |
| 4834 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4835 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 4836 headers = { 'Accept' : 'application/dicom+json' }) | |
| 4837 with open(GetDatabasePath(reference), 'rb') as c: | |
| 4838 d = json.load(c) | |
| 220 | 4839 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 4840 |
| 4841 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 4842 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 4843 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 4844 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 4845 |
| 4846 | |
| 4847 def test_issue_95_encodings(self): | |
| 319 | 4848 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 4849 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 4850 | |
| 4851 # Very useful tool: "file2" from package "file-kanji" | |
| 4852 | |
| 4853 def GetPatientName(dicom): | |
| 4854 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4855 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4856 return j['PatientName'] | |
| 4857 | |
| 4858 def ComparePatientName(name, dicom): | |
| 4859 self.assertEqual(name, GetPatientName(dicom)) | |
| 4860 | |
| 4861 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4862 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 4863 | |
| 4864 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 4865 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 4866 | |
| 4867 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 4868 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 4869 | |
| 4870 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 4871 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 4872 | |
| 4873 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 4874 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 4875 | |
| 4876 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4877 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 4878 | |
| 4879 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 4880 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 4881 | |
| 4882 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 4883 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 4884 | |
| 4885 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 4886 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 4887 # Linux console into Emacs automatically reverse the string | |
| 4888 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 4889 | |
| 4890 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 4891 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 4892 # characters by default, but copy/paste works with Emacs | |
| 4893 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 4894 | |
| 4895 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 4896 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 4897 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 4898 # remainer. Orthanc only takes into consideration the first | |
| 4899 # codepage: This is a limitation. | |
| 4900 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 4901 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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4902 |
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4903 |
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4904 def test_findscu_missing_tags(self): |
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4905 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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4906 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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4907 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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4908 |
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4909 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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4910 |
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4911 # We have 2 instances... |
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4912 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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4913 self.assertEqual(2, len(patientNames)) |
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4914 self.assertEqual('KNIX', patientNames[0]) |
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4915 self.assertEqual('KNIX', patientNames[1]) |
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4916 |
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4917 # ...but only 1 value for the "Rows" tag |
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4918 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
|
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4919 self.assertEqual(1, len(rows)) |
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4920 self.assertEqual('512', rows[0]) |
|
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4921 |
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4922 |
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4923 |
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4924 def test_bitbucket_issue_131(self): |
|
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4925 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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|
4926 # StudyInstanceUID in it's database." |
| 319 | 4927 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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4928 |
|
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|
4929 # Insert 2 instances, with the same StudyInstanceUID, but with |
|
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4930 # different patient IDs. Orthanc will create 2 distincts |
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4931 # patients, and the hierarchy of resources above the two |
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4932 # instances will be fully disjoint. |
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4933 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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4934 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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4935 |
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4936 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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4937 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4938 |
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4939 a = DoPost(_REMOTE, '/modalities/self/query', { |
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4940 'Level' : 'Study', |
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4941 'Query' : {"PatientID": "A" }})['ID'] |
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4942 |
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4943 # 1 study is matched |
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4944 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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4945 |
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|
4946 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4947 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4948 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4949 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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4950 |
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|
4951 # The two studies are matched, as we made the request at the |
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4952 # Study level, thus the shared StudyInstanceUID is used as the key |
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4953 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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4954 |
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4955 |
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4956 # Match the 2 studies |
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4957 a = DoPost(_REMOTE, '/modalities/self/query', { |
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4958 'Level' : 'Study', |
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4959 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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4960 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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4961 DropOrthanc(_LOCAL) |
|
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4962 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4963 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4964 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4965 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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|
4966 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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4967 |
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diff
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4968 |
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diff
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|
4969 # Same test, at the patient level => only 1 instance is transfered |
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|
4970 a = DoPost(_REMOTE, '/modalities/self/query', { |
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|
4971 'Level' : 'Patient', |
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4972 'Query' : {"PatientID": "A" }})['ID'] |
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diff
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|
4973 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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|
4974 DropOrthanc(_LOCAL) |
|
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diff
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|
4975 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4976 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4977 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4978 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
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|
4979 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
4980 |
|
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diff
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|
4981 |
|
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diff
changeset
|
4982 # Same test, at the series level => only 1 instance is transfered |
|
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|
4983 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
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|
4984 'Level' : 'Series', |
|
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diff
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|
4985 'Query' : {"PatientID": "A" }})['ID'] |
|
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diff
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|
4986 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
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parents:
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diff
changeset
|
4987 DropOrthanc(_LOCAL) |
|
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parents:
218
diff
changeset
|
4988 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 4989 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 4990 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 4991 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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diff
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|
4992 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
4993 |
|
233
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231
diff
changeset
|
4994 |
|
ce0b19a2c807
test_bitbucket_issue_136
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diff
changeset
|
4995 def test_bitbucket_issue_136(self): |
|
ce0b19a2c807
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diff
changeset
|
4996 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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diff
changeset
|
4997 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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diff
changeset
|
4998 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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diff
changeset
|
4999 self.assertEqual(1, len(patientNames)) |
|
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diff
changeset
|
5000 self.assertEqual('John Doe', patientNames[0]) |
|
234
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diff
changeset
|
5001 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5002 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5003 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5004 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
93cd4fdd4a67
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diff
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|
5005 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
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diff
changeset
|
5006 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5007 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
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test_anonymize_relationships_4
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diff
changeset
|
5008 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5009 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
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diff
changeset
|
5010 'application/json')['ID'] |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5011 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
93cd4fdd4a67
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diff
changeset
|
5012 self.assertEqual(2, len(series)) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5013 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5014 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5015 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5016 self.assertEqual(1, len(cr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5017 self.assertEqual(1, len(pr)) |
|
93cd4fdd4a67
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233
diff
changeset
|
5018 self.assertEqual(1, len(cr[0]['Instances'])) |
|
93cd4fdd4a67
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233
diff
changeset
|
5019 self.assertEqual(1, len(pr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5020 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5021 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5022 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5023 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5024 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5025 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5026 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5027 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5028 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5029 # This fails on Orthanc <= 1.5.6 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5030 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5031 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5032 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5033 |
|
255
02c3d91b155c
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diff
changeset
|
5034 def test_anonymize_relationships_5(self): |
|
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parents:
254
diff
changeset
|
5035 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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parents:
254
diff
changeset
|
5036 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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parents:
254
diff
changeset
|
5037 oStudyId = ct1['ParentStudy'] |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5038 oCtInstanceId = ct1['ID'] |
|
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parents:
254
diff
changeset
|
5039 oRtInstanceId = rt1['ID'] |
|
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parents:
254
diff
changeset
|
5040 |
|
02c3d91b155c
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diff
changeset
|
5041 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
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diff
changeset
|
5042 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
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diff
changeset
|
5043 |
|
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254
diff
changeset
|
5044 # first validate the relationships in the source data |
|
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diff
changeset
|
5045 oStudyUID = oCtTags['StudyInstanceUID'] |
|
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diff
changeset
|
5046 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5047 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5048 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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diff
changeset
|
5049 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5050 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5051 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
|
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diff
changeset
|
5052 |
|
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254
diff
changeset
|
5053 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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diff
changeset
|
5054 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
|
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diff
changeset
|
5055 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5056 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
|
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diff
changeset
|
5057 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5058 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5059 |
|
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diff
changeset
|
5060 ### anonymize |
|
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diff
changeset
|
5061 |
|
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diff
changeset
|
5062 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
|
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diff
changeset
|
5063 'application/json')['ID'] |
|
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diff
changeset
|
5064 |
|
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diff
changeset
|
5065 ### validate |
|
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diff
changeset
|
5066 |
|
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diff
changeset
|
5067 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
|
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254
diff
changeset
|
5068 self.assertEqual(2, len(aSeries)) |
|
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diff
changeset
|
5069 |
|
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diff
changeset
|
5070 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
|
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diff
changeset
|
5071 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
|
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diff
changeset
|
5072 aCtInstanceId = aCt[0]['Instances'][0] |
|
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5073 aRtInstanceId = aRt[0]['Instances'][0] |
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5074 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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5075 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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5076 |
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5077 # now validate the relationships in the anonymized data |
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5078 aStudyUID = aCtTags['StudyInstanceUID'] |
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5079 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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5080 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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5081 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5082 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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5083 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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5084 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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5085 |
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5086 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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5087 # make sure all UIDs have been updated |
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5088 self.assertNotEqual(oStudyUID, aStudyUID) |
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5089 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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5090 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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5091 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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5092 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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5093 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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5094 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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5095 |
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5096 # validate the relationships |
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5097 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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5098 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5099 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5100 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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5101 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5102 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5103 |
| 256 | 5104 def test_anonymize_relationships_5b(self): |
| 5105 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5106 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5107 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5108 oStudyId = ct1['ParentStudy'] | |
| 5109 oCtInstanceId = ct1['ID'] | |
| 5110 oRtInstanceId = rt1['ID'] | |
| 5111 | |
| 5112 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5113 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5114 | |
| 5115 ### anonymize while forcing the StudyInstanceUID | |
| 5116 | |
| 5117 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5118 'application/json')['ID'] | |
| 5119 | |
| 5120 ### validate | |
| 5121 | |
| 5122 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5123 self.assertEqual(2, len(aSeries)) | |
| 5124 | |
| 5125 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5126 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5127 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5128 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5129 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5130 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5131 | |
| 5132 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5133 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5134 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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5135 |
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5136 |
|
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5137 def test_bitbucket_issue_140(self): |
| 266 | 5138 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5139 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5140 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
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5141 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
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5142 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
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5143 |
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5144 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5145 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5146 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
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5147 }, 'application/json') ['ID'] |
|
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5148 |
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5149 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
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5150 self.assertEqual(1, len(instances)) |
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5151 |
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5152 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
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5153 t = tags['4321,1012'] |
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5154 self.assertEqual('String', t['Type']) |
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5155 self.assertEqual('RadioButton3', t['Name']) |
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5156 self.assertEqual('RadioLogic', t['PrivateCreator']) |
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5157 self.assertEqual('jklmopq', t['Value']) |
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5158 |
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|
5159 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
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|
5160 t = tags['4321,1012'] |
| 327 | 5161 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
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|
5162 self.assertEqual('RadioButton3', t['Name']) |
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|
5163 self.assertEqual('RadioLogic', t['PrivateCreator']) |
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5164 self.assertEqual('aaabbbccc', t['Value']) |
|
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5165 |
|
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5166 |
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|
5167 def test_find_normalize(self): |
|
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|
5168 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
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5169 |
|
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|
5170 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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5171 |
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|
5172 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5173 'Level' : 'Instance', |
|
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5174 'Query' : { 'Rows' : '42' } |
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5175 }) ['ID'] |
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5176 |
|
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|
5177 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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|
5178 self.assertEqual(1, len(b)) |
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5179 self.assertFalse('Rows' in b[0]) |
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5180 |
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5181 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5182 'Level' : 'Instance', |
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5183 'Query' : { 'Rows' : '42' }, |
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5184 'Normalize' : False |
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5185 }) ['ID'] |
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5186 |
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5187 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
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5188 self.assertEqual(0, len(b)) |
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5189 |
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5190 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5191 'Level' : 'Instance', |
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5192 'Query' : { 'Rows' : '512' }, |
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5193 'Normalize' : False |
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5194 }) ['ID'] |
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5195 |
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5196 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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5197 self.assertEqual(1, len(b)) |
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5198 self.assertTrue('Rows' in b[0]) |
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5199 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5200 |
| 5201 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5202 'Level' : 'Instance', | |
| 5203 'Query' : { 'Rows' : '' }, | |
| 5204 'Normalize' : False | |
| 5205 }) ['ID'] | |
| 5206 | |
| 5207 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5208 self.assertEqual(1, len(b)) | |
| 5209 self.assertTrue('Rows' in b[0]) | |
| 5210 self.assertEqual('512', b[0]['Rows']) | |
| 5211 | |
| 5212 self.assertRaises(Exception, lambda: DoPost( | |
| 5213 _REMOTE, '/modalities/self/query', { | |
| 5214 'Level' : 'Instance', | |
| 5215 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5216 'Normalize' : False | |
| 5217 })) | |
|
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5218 |
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5219 |
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5220 def test_bitbucket_issue_141(self): |
| 319 | 5221 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
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5222 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
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test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5223 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5224 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5225 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5226 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5227 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5228 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5229 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5230 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5231 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5232 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5233 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5234 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5235 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5236 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5237 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5238 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5239 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5240 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5241 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5242 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5243 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5244 |
| 5245 | |
| 5246 def test_log_level(self): | |
| 319 | 5247 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5248 original = DoGet(_REMOTE, '/tools/log-level') |
| 5249 | |
| 5250 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5251 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5252 DoGet(_REMOTE, '/system') | |
| 5253 | |
| 5254 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5255 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5256 DoGet(_REMOTE, '/system') | |
| 5257 | |
| 5258 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5259 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5260 DoGet(_REMOTE, '/system') | |
| 5261 | |
| 5262 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5263 | |
| 5264 # Switch back to the original log level | |
| 5265 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5266 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5267 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5268 def test_upload_compressed(self): |
| 265 | 5269 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5270 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5271 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5272 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5273 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5274 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5275 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5276 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5277 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5278 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5279 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5280 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5281 |
| 5282 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5283 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5284 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5285 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5286 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5287 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5288 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5289 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5290 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5291 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5292 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5293 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5294 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5295 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5296 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5297 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5298 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5299 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5300 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5301 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5302 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5303 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5304 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5305 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5306 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5307 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5308 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5309 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5310 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5311 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5312 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5313 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5314 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5315 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5316 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5317 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5318 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5319 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5320 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5321 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5322 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5323 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5324 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5325 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5326 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5327 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5328 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5329 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5330 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5331 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5332 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5333 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5334 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5335 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5336 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5337 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5338 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5339 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5340 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5341 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5342 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5343 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5344 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5345 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5346 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5347 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5348 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5349 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5350 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5351 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5352 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5353 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5354 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5355 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5356 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5357 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5358 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5359 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5360 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5361 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5362 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5363 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5364 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5365 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5366 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5367 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5368 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5369 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5370 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5371 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5372 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5373 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5374 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5375 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5376 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5377 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5378 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5379 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5380 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5381 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5382 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5383 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5384 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5385 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5386 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5387 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5388 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5389 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5390 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5391 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5392 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5393 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5394 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5395 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5396 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5397 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5398 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5399 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5400 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5401 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5402 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5403 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5404 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5405 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5406 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5407 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5408 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5409 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5410 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5411 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5412 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5413 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5414 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5415 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5416 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5417 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5418 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5419 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5420 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5421 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5422 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5423 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5424 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5425 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5426 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5427 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5428 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5429 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5430 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5431 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5432 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5433 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5434 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5435 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5436 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5437 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5438 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5439 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5440 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5441 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5442 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5443 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5444 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5445 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5446 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5447 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5448 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5449 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5450 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5451 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5452 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5453 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5454 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5455 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5456 'Level' : 'Study', |
|
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5457 'Query' : { |
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5458 'ProtocolName' : '' # Universal matching |
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5459 }, |
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5460 'Normalize' : normalize, |
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5461 })) |
|
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5462 |
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5463 |
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5464 ## |
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5465 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
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5466 ## |
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5467 |
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5468 for level in [ 'Study', 'Series' ] : |
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5469 for normalize in [ True, False ]: |
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5470 self.assertEqual(1, CountAnswers({ |
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5471 'Level' : level, |
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5472 'Query' : { |
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5473 'StudyInstanceUID' : '' # Universal matching |
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5474 }, |
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5475 'Normalize' : normalize, |
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5476 })) |
|
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5477 self.assertEqual(0, CountAnswers({ |
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5478 'Level' : level, |
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5479 'Query' : { |
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5480 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
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5481 }, |
|
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5482 'Normalize' : normalize, |
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5483 })) |
|
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5484 self.assertEqual(1, CountAnswers({ |
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5485 'Level' : level, |
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5486 'Query' : { |
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5487 'StudyInstanceUID' : '4.5.6' # This is the actual value |
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5488 }, |
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5489 'Normalize' : normalize, |
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5490 })) |
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5491 |
| 269 | 5492 # Wildcard matching is not allowed for this VR |
|
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5493 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5494 self.assertRaises(Exception, lambda: CountAnswers({ |
|
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5495 'Level' : level, |
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5496 'Query' : { |
| 269 | 5497 'StudyInstanceUID' : '*' |
|
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5498 }, |
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5499 'Normalize' : normalize, |
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5500 })) |
| 265 | 5501 |
| 5502 | |
| 5503 def test_rendered(self): | |
| 5504 # New in Orthanc 1.6.0 | |
| 5505 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5506 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5507 self.assertEqual("RGB", im.mode) | |
| 5508 self.assertEqual(41, im.size[0]) | |
| 5509 self.assertEqual(41, im.size[1]) | |
| 5510 | |
| 5511 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5512 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5513 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5514 | |
| 5515 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5516 self.assertEqual("RGB", im.mode) | |
| 5517 self.assertEqual(10, im.size[0]) | |
| 5518 self.assertEqual(10, im.size[1]) | |
| 5519 | |
| 5520 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5521 self.assertEqual("RGB", im.mode) | |
| 5522 self.assertEqual(10, im.size[0]) | |
| 5523 self.assertEqual(10, im.size[1]) | |
| 5524 | |
| 5525 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5526 self.assertEqual("RGB", im.mode) | |
| 5527 self.assertEqual(128, im.size[0]) | |
| 5528 self.assertEqual(128, im.size[1]) | |
| 5529 | |
| 5530 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5531 self.assertEqual("RGB", im.mode) | |
| 5532 self.assertEqual(10, im.size[0]) | |
| 5533 self.assertEqual(10, im.size[1]) | |
| 5534 | |
| 5535 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5536 self.assertEqual("RGB", im.mode) | |
| 5537 self.assertEqual(10, im.size[0]) | |
| 5538 self.assertEqual(10, im.size[1]) | |
| 5539 | |
| 5540 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5541 self.assertEqual("RGB", im.mode) | |
| 5542 self.assertEqual(5, im.size[0]) | |
| 5543 self.assertEqual(5, im.size[1]) | |
| 5544 | |
| 5545 | |
| 5546 # Grayscale image | |
| 5547 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5548 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5549 self.assertEqual("L", im.mode) | |
| 5550 self.assertEqual(288, im.size[0]) | |
| 5551 self.assertEqual(288, im.size[1]) | |
| 5552 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5553 | |
| 5554 # Those are the original windowing parameters that are written | |
| 5555 # inside the DICOM file | |
| 5556 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5557 self.assertEqual("L", im2.mode) | |
| 5558 self.assertEqual(288, im2.size[0]) | |
| 5559 self.assertEqual(288, im2.size[1]) | |
| 5560 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5561 | |
| 5562 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5563 self.assertEqual("L", im.mode) | |
| 5564 self.assertEqual(512, im.size[0]) | |
| 5565 self.assertEqual(512, im.size[1]) | |
| 5566 | |
| 5567 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5568 self.assertEqual("L", im.mode) | |
| 5569 self.assertEqual(10, im.size[0]) | |
| 5570 self.assertEqual(10, im.size[1]) | |
| 5571 | |
| 5572 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5573 self.assertEqual("L", im.mode) | |
| 5574 self.assertEqual(10, im.size[0]) | |
| 5575 self.assertEqual(10, im.size[1]) | |
| 5576 | |
| 5577 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5578 self.assertEqual("L", im.mode) | |
| 5579 self.assertEqual(1, im.size[0]) | |
| 5580 self.assertEqual(1, im.size[1]) | |
| 5581 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5582 | |
| 5583 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5584 self.assertEqual("L", im.mode) | |
| 5585 self.assertEqual(1, im.size[0]) | |
| 5586 self.assertEqual(1, im.size[1]) | |
| 5587 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5588 | |
| 5589 | |
| 5590 # Test monochrome 1 | |
| 5591 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5592 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5593 self.assertEqual("L", im.mode) | |
| 5594 self.assertEqual(2010, im.size[0]) | |
| 5595 self.assertEqual(2446, im.size[1]) | |
| 5596 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5597 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5598 self.assertEqual("L", im.mode) | |
| 5599 self.assertEqual(20, im.size[0]) | |
| 5600 self.assertEqual(24, im.size[1]) | |
| 5601 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5602 self.assertEqual("L", im.mode) | |
| 5603 self.assertEqual(20, im.size[0]) | |
| 5604 self.assertEqual(24, im.size[1]) | |
| 5605 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5606 self.assertEqual("L", im.mode) | |
| 5607 self.assertEqual(10, im.size[0]) | |
| 5608 self.assertEqual(12, im.size[1]) | |
| 5609 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5610 self.assertEqual("L", im.mode) | |
| 5611 self.assertEqual(20, im.size[0]) | |
| 5612 self.assertEqual(24, im.size[1]) | |
|
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5613 |
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5614 |
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5615 def test_bitbucket_issue_154(self): |
|
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5616 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5617 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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5618 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5619 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5620 |
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5621 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5622 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5623 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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5624 |
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5625 # C-FIND is working on list of UIDs |
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5626 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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5627 '-k', 'StudyInstanceUID=%s' % study, |
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5628 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5629 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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5630 self.assertEqual(2, len(series)) |
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5631 self.assertTrue(series1 in series) |
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5632 self.assertTrue(series2 in series) |
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5633 |
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5634 # Individual retrieval is working in Orthanc < 1.6.0 |
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5635 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5636 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5637 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5638 '-k', 'StudyInstanceUID=%s' % study, |
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5639 '-k', 'SeriesInstanceUID=%s' % series1, |
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5640 ]))) |
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5641 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5642 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5643 '-k', 'StudyInstanceUID=%s' % study, |
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5644 '-k', 'SeriesInstanceUID=%s' % series2, |
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5645 ]))) |
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5646 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5647 |
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5648 DropOrthanc(_LOCAL) |
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5649 |
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5650 # But list matching is working only in Orthanc >= 1.6.0 |
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5651 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
5652 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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|
5653 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
|
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|
5654 '-k', 'StudyInstanceUID=%s' % study, |
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|
5655 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
|
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5656 ]))) |
|
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5657 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5658 |
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|
5659 |
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5660 def test_storage_commitment_api(self): |
|
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5661 # Storage commitment is available since Orthanc 1.6.0 |
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5662 |
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5663 def WaitTransaction(uid): |
|
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5664 while True: |
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5665 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5666 if s['Status'] != 'Pending': |
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5667 return s |
|
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|
5668 else: |
|
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5669 time.sleep(0.01) |
|
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5670 |
| 281 | 5671 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5672 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5673 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5674 |
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5675 # Against self |
| 281 | 5676 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5677 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5678 }) ['ID'] | |
|
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5679 self.assertTrue(transaction.startswith('2.25.')) |
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5680 |
|
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|
5681 result = WaitTransaction(transaction) |
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|
5682 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5683 self.assertEqual('Success', result['Status']) |
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|
5684 self.assertEqual(1, len(result['Success'])) |
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|
5685 self.assertEqual(0, len(result['Failures'])) |
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|
5686 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5687 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5688 |
| 281 | 5689 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5690 "DicomInstances" : [ | |
| 5691 { 'SOPClassUID' : sopClassUid, | |
| 5692 'SOPInstanceUID' : sopInstanceUid }, | |
| 5693 ], | |
| 5694 }) | |
| 5695 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5696 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5697 | |
| 5698 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5699 "Resources" : [ | |
| 5700 instance['ID'], | |
| 5701 instance['ParentSeries'], | |
| 5702 instance['ParentStudy'], | |
| 5703 instance['ParentPatient'], | |
| 5704 ] | |
| 5705 }) | |
|
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5706 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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5707 self.assertEqual(result, WaitTransaction(transaction)) |
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|
5708 |
|
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|
5709 |
| 281 | 5710 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5711 "DicomInstances" : [ | |
| 5712 [ 'nope', 'nope2' ], | |
| 5713 [ sopClassUid, sopInstanceUid ], | |
| 5714 ], | |
| 5715 }) ['ID'] | |
|
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|
5716 self.assertTrue(transaction.startswith('2.25.')) |
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|
5717 |
|
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|
5718 result = WaitTransaction(transaction) |
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|
5719 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5720 self.assertEqual('Failure', result['Status']) |
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|
5721 self.assertEqual(1, len(result['Success'])) |
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|
5722 self.assertEqual(1, len(result['Failures'])) |
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|
5723 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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|
5724 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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|
5725 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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|
5726 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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|
5727 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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|
5728 |
|
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|
5729 # Cannot remove items from a failed storage commitment transaction |
|
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|
5730 self.assertRaises(Exception, lambda: |
|
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|
5731 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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|
5732 |
|
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|
5733 |
|
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|
5734 # Against Orthanc 0.8.6, that does not support storage commitment |
|
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|
5735 self.assertRaises(Exception, lambda: |
| 281 | 5736 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
| 5737 "DicomInstances" : [ | |
| 5738 [ sopClassUid, sopInstanceUid ], | |
| 5739 ] | |
| 5740 })) | |
|
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|
5741 |
|
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changeset
|
5742 |
|
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changeset
|
5743 |
|
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|
5744 def test_storage_commitment_store(self): |
|
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|
5745 # Storage commitment is available since Orthanc 1.6.0 |
|
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|
5746 |
|
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changeset
|
5747 def WaitTransaction(uid): |
|
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|
5748 while True: |
|
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|
5749 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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|
5750 if s['Status'] != 'Pending': |
|
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|
5751 return s |
|
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|
5752 else: |
|
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|
5753 time.sleep(0.01) |
|
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|
5754 |
|
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|
5755 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
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|
5756 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
5757 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
5758 |
|
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|
5759 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
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|
5760 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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|
5761 'Resources' : [ i ], |
|
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|
5762 'StorageCommitment' : True, |
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|
5763 })) |
|
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|
5764 |
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|
5765 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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|
5766 'Resources' : [ i ], |
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5767 'StorageCommitment' : False, |
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|
5768 }) |
|
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|
5769 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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|
5770 |
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|
5771 j = DoPost(_REMOTE, '/modalities/self/store', { |
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|
5772 'Resources' : [ i ], |
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|
5773 'StorageCommitment' : True, |
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|
5774 }) |
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|
5775 |
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|
5776 transaction = j['StorageCommitmentTransactionUID'] |
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|
5777 self.assertTrue(transaction.startswith('2.25.')) |
|
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|
5778 |
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|
5779 result = WaitTransaction(transaction) |
|
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|
5780 self.assertEqual('ORTHANC', result['RemoteAET']) |
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|
5781 self.assertEqual('Success', result['Status']) |
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|
5782 self.assertEqual(1, len(result['Success'])) |
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|
5783 self.assertEqual(0, len(result['Failures'])) |
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|
5784 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5785 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5786 result['Success'][0]['SOPInstanceUID']) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5787 |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5788 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5789 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
|
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5790 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5791 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5792 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5793 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5794 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5795 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5796 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5797 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5798 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5799 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5800 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5801 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5802 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5803 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5804 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5805 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5806 answer['SOPClassUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5807 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5808 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5809 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5810 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5811 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5812 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5813 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5814 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5815 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5816 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5817 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5818 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5819 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5820 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5821 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5822 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5823 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5824 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5825 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5826 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5827 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5828 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5829 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5830 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5831 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5832 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5833 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5834 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5835 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5836 # Export, with transcoding disabled => this fails |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5837 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5838 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5839 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
5840 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5841 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5842 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5843 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5844 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5845 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5846 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5847 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5848 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5849 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5850 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5851 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5852 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5853 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5854 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5855 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5856 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5857 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5858 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5859 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5860 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5861 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5862 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5863 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5864 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5865 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5866 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5867 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5868 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5869 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5870 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5871 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5872 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5873 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5874 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5875 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5876 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5877 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5878 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5879 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5880 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5881 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5882 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
5883 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5884 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5885 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5886 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5887 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5888 '1.2.840.10008.1.2.4.70', |
|
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HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5889 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5890 |
| 304 | 5891 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5892 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5893 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5894 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5895 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5896 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5897 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5898 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5899 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5900 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5901 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5902 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5903 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5904 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5905 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5906 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5907 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5908 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5909 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5910 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5911 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5912 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5913 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5914 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5915 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5916 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5917 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5918 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5919 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5920 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5921 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5922 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5923 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5924 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5925 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5926 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5927 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5928 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5929 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5930 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5931 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5932 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5933 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5934 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5935 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5936 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5937 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5938 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5939 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5940 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5941 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5942 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5943 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5944 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5945 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5946 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5947 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5948 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5949 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5950 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5951 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5952 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5953 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5954 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5955 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5956 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5957 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5958 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5959 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5960 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5961 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5962 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5963 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5964 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5965 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5966 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5967 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5968 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5969 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5970 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5971 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5972 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5973 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5974 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5975 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5976 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5977 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5978 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5979 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5980 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5981 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5982 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5983 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5984 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5985 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5986 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5987 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5988 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5989 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5990 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5991 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5992 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5993 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5994 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5995 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5996 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5997 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5998 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5999 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6000 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6001 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6002 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6003 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6004 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6005 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6006 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6007 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6008 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6009 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6010 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6011 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6012 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6013 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6014 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6015 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6016 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6017 |
| 308 | 6018 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6019 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6020 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6021 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6022 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6023 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6024 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6025 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6026 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6027 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6028 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6029 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6030 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6031 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6032 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6033 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6034 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6035 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6036 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6037 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6038 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6039 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6040 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6041 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6042 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6043 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6044 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6045 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6046 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6047 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6048 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6049 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6050 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6051 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6052 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6053 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6054 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6055 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6056 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6057 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6058 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6059 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6060 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6061 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6062 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6063 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6064 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6065 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6066 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6067 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6068 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6069 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6070 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6071 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6072 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6073 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6074 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6075 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6076 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6077 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6078 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6079 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6080 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6081 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6082 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6083 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6084 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6085 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6086 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6087 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6088 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6089 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6090 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6091 |
|
ed20ead1a8b6
test_store_peer_transcoding
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6092 for syntax in SYNTAXES: |
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6093 body = { |
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6094 'Resources' : [ i ], |
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6095 } |
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6096 |
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6097 if syntax != '1.2.840.10008.1.2.1': |
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6098 body['Transcode'] = syntax |
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6099 |
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6100 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6101 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6102 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
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6103 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6104 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6105 self.assertEqual(syntax, GetTransferSyntax( |
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6106 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
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6107 |
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6108 DropOrthanc(_LOCAL) |
| 308 | 6109 |
| 6110 | |
| 295 | 6111 def test_getscu(self): |
| 307 | 6112 def CleanTarget(): |
| 6113 if os.path.isdir('/tmp/GETSCU'): | |
| 6114 shutil.rmtree('/tmp/GETSCU') | |
| 6115 os.makedirs('/tmp/GETSCU') | |
| 6116 | |
|
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6117 env = {} |
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6118 if _DOCKER: |
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6119 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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6120 # and running in a GNU/Linux distribution running DCMTK |
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6121 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
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6122 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
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6123 |
| 295 | 6124 # no transcoding required |
| 307 | 6125 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6126 | |
| 6127 CleanTarget() | |
| 295 | 6128 |
|
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6129 subprocess.check_call([ |
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6130 FindExecutable('getscu'), |
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6131 _REMOTE['Server'], |
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6132 str(_REMOTE['DicomPort']), |
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6133 '-aec', 'ORTHANC', |
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6134 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6135 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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6136 '-k', '0008,0052=STUDY', |
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6137 '--output-directory', '/tmp/GETSCU/' |
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6138 ], env = env) |
| 295 | 6139 |
| 311 | 6140 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6141 self.assertTrue(os.path.isfile(f1)) | |
| 6142 with open(f1, 'rb') as f: | |
| 6143 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6144 | |
| 307 | 6145 CleanTarget() |
| 295 | 6146 |
| 6147 # transcoding required | |
| 311 | 6148 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6149 |
| 6150 subprocess.check_call([ | |
| 6151 FindExecutable('getscu'), | |
| 6152 _REMOTE['Server'], | |
| 6153 str(_REMOTE['DicomPort']), | |
| 6154 '-aec', 'ORTHANC', | |
| 6155 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6156 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6157 '-k', '0008,0052=STUDY', |
| 6158 '--output-directory', '/tmp/GETSCU/' | |
| 6159 ], env = env) | |
| 6160 | |
| 311 | 6161 self.assertTrue(os.path.isfile(f1)) |
| 6162 with open(f1, 'rb') as f: | |
| 6163 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6164 | |
| 6165 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6166 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6167 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6168 self.assertTrue(os.path.isfile(f2)) | |
| 6169 with open(f2, 'rb') as f: | |
| 6170 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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6171 |
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6172 |
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6173 def test_findscu_truncation(self): |
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6174 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
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6175 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
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6176 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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6177 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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6178 |
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6179 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
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6180 |
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6181 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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6182 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6183 self.assertEqual(2, len(result)) |
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6184 |
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6185 # The "StudyInstanceUID" is set as a list of 5 times the same |
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6186 # study, leading to a string of 249 characters |
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6187 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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6188 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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6189 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6190 self.assertEqual(1, len(result)) |
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6191 |
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6192 # The "StudyInstanceUID" is set as a list of 6 times the same |
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6193 # study, leading to a string of 299 characters. In Orthanc <= |
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6194 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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6195 # == 256, and is thus wiped out by C-FIND SCP. As a |
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6196 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
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6197 # "StudyInstanceUID" and returns all the available |
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6198 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
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6199 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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6200 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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6201 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6202 self.assertEqual(1, len(result)) |
|
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6203 |
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6204 |
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6205 def test_store_compressed(self): |
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6206 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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6207 dicom = f.read() |
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6208 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
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6209 sourceSize = len(dicom) |
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6210 |
|
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6211 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6212 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6213 |
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6214 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
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6215 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
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6216 _REMOTE, '/peers/peer/store', { |
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6217 'Resources' : [ i ], |
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6218 'Synchronous' : False, |
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6219 })) |
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6220 |
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6221 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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6222 self.assertFalse(job['Content']['Compress']) |
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6223 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
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6224 self.assertEqual(str(sourceSize), job['Content']['Size']) |
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6225 |
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6226 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6227 DropOrthanc(_LOCAL) |
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6228 |
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6229 # Sending to the local Orthanc 0.8.6 server, with compression: |
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6230 # Not supported by Orthanc 0.8.6 => failure |
|
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6231 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
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6232 'Resources' : [ i ], |
|
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6233 'Compress' : True, |
|
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6234 })) |
|
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6235 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6236 |
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6237 # Sending to the tested remote server, with compression: OK |
|
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|
6238 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
6239 _REMOTE, '/peers/self/store', { |
|
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6240 'Resources' : [ i ], |
|
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6241 'Compress' : True, |
|
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6242 'Synchronous' : False, |
|
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|
6243 })) |
|
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|
6244 |
|
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|
6245 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
6246 self.assertTrue(job['Content']['Compress']) |
|
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6247 |
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|
6248 # Compression must have divided the size of the sent data at least twice |
|
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|
6249 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6250 |
| 6251 | |
| 6252 def test_move_ambra(self): | |
| 6253 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6254 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6255 | |
| 6256 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6257 | |
| 6258 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6259 '--study', | |
| 6260 '-k', 'StudyInstanceUID=' | |
| 6261 ]))) | |
| 6262 | |
| 6263 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6264 '--study', | |
| 6265 '-k', 'AccessionNumber=', | |
| 6266 ]))) | |
| 6267 | |
| 6268 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6269 '--study', | |
| 6270 '-k', 'AccessionNumber=', | |
| 6271 '-k', 'StudyInstanceUID=' | |
| 6272 ]))) | |
| 6273 | |
| 6274 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6275 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6276 '--study', | |
| 6277 '-k', 'AccessionNumber=CT16000988', | |
| 6278 '-k', 'StudyInstanceUID=', | |
| 6279 ]))) | |
| 6280 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6281 DropOrthanc(_LOCAL) | |
| 6282 | |
| 6283 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6284 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6285 '--study', | |
| 6286 '-k', 'AccessionNumber=CT16000988', | |
| 6287 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6288 ]))) | |
| 6289 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6290 DropOrthanc(_LOCAL) | |
| 6291 | |
| 6292 # This fails on Orthanc <= 1.7.3 | |
| 6293 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6294 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6295 '--study', | |
| 6296 '-k', 'AccessionNumber=', | |
| 6297 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6298 ]))) | |
| 6299 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6300 DropOrthanc(_LOCAL) | |
|
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6301 |
|
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|
6302 |
|
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|
6303 def test_decode_elscint(self): |
|
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6304 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
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|
6305 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
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6306 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
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|
6307 |
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|
6308 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
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6309 self.assertEqual("L", im.mode) |
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6310 self.assertEqual(512, im.size[0]) |
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6311 self.assertEqual(512, im.size[1]) |
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6312 |
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|
6313 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
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|
6314 self.assertEqual("L", im.mode) |
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6315 self.assertEqual(512, im.size[0]) |
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6316 self.assertEqual(512, im.size[1]) |
|
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6317 |
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|
6318 # The two tests below fail on Orthanc <= 1.7.3 |
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|
6319 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
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|
6320 self.assertEqual(512 * 512 * 2, len(raw)) |
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|
6321 |
|
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changeset
|
6322 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
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|
6323 self.assertEqual(512 * 512 * 2, len(raw)) |
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|
6324 |
|
334
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|
6325 |
|
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|
6326 def test_rest_modalities_in_study_2(self): |
|
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|
6327 # Problem reported by Alain Mazy on 2020-09-15 |
|
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|
6328 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
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|
6329 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
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|
6330 |
|
335
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changeset
|
6331 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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|
6332 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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|
6333 self.assertEqual(1, len(modalitiesInStudy)) |
|
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|
6334 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
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changeset
|
6335 |
|
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|
6336 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
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|
6337 # The empty string '' corresponds to universal matching. |
|
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|
6338 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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changeset
|
6339 |
|
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changeset
|
6340 if i in [ 'UX', 'UX\\MR' ]: |
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|
6341 expected = 0 |
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|
6342 else: |
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|
6343 expected = 1 |
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|
6344 |
|
334
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changeset
|
6345 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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|
6346 'Query' : { 'ModalitiesInStudy' : i }}) |
|
335
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|
6347 self.assertEqual(expected, len(a)) |
|
334
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|
6348 |
|
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diff
changeset
|
6349 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
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|
6350 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6351 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
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|
6352 |
|
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|
6353 |
|
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|
6354 def test_webdav(self): |
|
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6355 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
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|
6356 |
|
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|
6357 for suffix in [ '', '/' ]: |
|
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6358 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
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|
6359 self.assertEqual(1, len(f)) |
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|
6360 self.assertTrue('/webdav/' in f.keys()) |
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6361 self.assertTrue(f['/webdav/']['folder']) |
|
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|
6362 self.assertEqual('webdav', f['/webdav/']['displayname']) |
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|
6363 |
|
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|
6364 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
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|
6365 self.assertEqual(6, len(f)) |
|
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|
6366 self.assertTrue(f['/webdav/']['folder']) |
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|
6367 self.assertEqual('webdav', f['/webdav/']['displayname']) |
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6368 |
|
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|
6369 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
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|
6370 self.assertTrue(f['/webdav/%s' % i]['folder']) |
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|
6371 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
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|
6372 |
|
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|
6373 for depth in [ 0, 1 ]: |
|
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diff
changeset
|
6374 for suffix2 in [ '', '/' ]: |
|
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diff
changeset
|
6375 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
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|
6376 |
|
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diff
changeset
|
6377 if i == 'uploads': |
|
bf8369ea3ff1
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diff
changeset
|
6378 # Empty folders might still exist in "/uploads/" |
|
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diff
changeset
|
6379 self.assertTrue('/webdav/uploads/' in g) |
|
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diff
changeset
|
6380 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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diff
changeset
|
6381 for j in g.items(): |
|
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diff
changeset
|
6382 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
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|
6383 else: |
|
bf8369ea3ff1
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diff
changeset
|
6384 self.assertEqual(1, len(g)) |
|
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diff
changeset
|
6385 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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diff
changeset
|
6386 self.assertTrue(g.items()[0][1]['folder']) |
|
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parents:
341
diff
changeset
|
6387 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6388 |
|
342
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diff
changeset
|
6389 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
6390 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
6391 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
6392 |
|
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341
diff
changeset
|
6393 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
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parents:
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diff
changeset
|
6394 time.sleep(0.01) |
|
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341
diff
changeset
|
6395 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6396 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6397 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6398 def test_log_categories(self): |
| 350 | 6399 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
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348
diff
changeset
|
6400 |
| 350 | 6401 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6402 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
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parents:
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diff
changeset
|
6403 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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diff
changeset
|
6404 |
| 350 | 6405 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6406 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6407 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6408 |
| 350 | 6409 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6410 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6411 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6412 |
| 350 | 6413 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6414 |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6415 # Switch back to the original log level |
| 350 | 6416 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6417 | |
| 6418 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6419 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6420 |
|
698898a93a10
test_log_categories
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348
diff
changeset
|
6421 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6422 |
| 6423 | |
| 6424 def test_upload_zip(self): | |
| 6425 f = StringIO() | |
| 6426 with zipfile.ZipFile(f, 'w') as z: | |
| 6427 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6428 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6429 c = g.read() | |
| 6430 z.writestr('hello/world/dicom1.dcm', c) | |
| 6431 z.writestr('hello/world/dicom2.dcm', c) | |
| 6432 | |
| 6433 f.seek(0) | |
| 6434 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6435 | |
| 6436 self.assertEqual(2, len(i)) | |
| 6437 self.assertEqual(i[0], i[1]) | |
| 6438 self.assertEqual(6, len(i[0])) | |
| 6439 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 6440 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 6441 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 6442 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 6443 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 6444 | |
| 6445 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 6446 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6447 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6448 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6449 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6450 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6451 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
6452 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6453 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6454 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6455 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6456 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6457 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6458 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6459 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6460 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6461 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6462 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6463 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6464 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6465 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6466 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6467 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6468 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6469 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6470 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6471 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6472 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6473 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6474 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6475 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6476 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6477 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6478 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6479 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6480 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
6481 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6482 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6483 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6484 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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parents:
363
diff
changeset
|
6485 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6486 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6487 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6488 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
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diff
changeset
|
6489 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6490 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6491 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6492 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6493 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
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363
diff
changeset
|
6494 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6495 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6496 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
6497 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6498 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6499 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6500 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6501 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6502 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6503 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6504 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6505 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6506 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6507 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6508 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6509 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6510 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6511 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6512 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6513 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6514 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6515 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6516 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6517 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6518 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6519 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6520 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6521 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6522 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6523 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6524 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6525 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6526 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6527 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6528 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6529 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6530 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6531 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6532 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6533 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6534 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6535 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6536 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6537 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6538 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6539 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6540 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6541 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6542 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6543 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6544 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6545 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6546 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6547 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6548 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6549 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6550 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6551 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6552 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6553 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6554 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6555 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6556 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6557 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6558 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6559 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6560 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6561 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6562 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6563 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6564 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6565 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6566 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6567 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6568 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6569 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6570 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6571 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6572 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6573 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6574 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6575 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6576 self.assertEqual(3, len(peer)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6577 self.assertEqual(5, peer['DatabaseVersion']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6578 self.assertEqual('MyOrthanc', peer['Name']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6579 self.assertEqual('0.8.6', peer['Version']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6580 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6581 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6582 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6583 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6584 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6585 # "ParentStudy", "ParentSeries" are not reported |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6586 self.assertEqual(3, len(j)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6587 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6588 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6589 self.assertEqual('Success', j['Status']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6590 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6591 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6592 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 6593 |
| 6594 | |
| 6595 def test_cp246(self): | |
| 6596 # This fails on Orthanc <= 1.9.0 | |
| 6597 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 6598 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 6599 | |
| 6600 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 6601 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 6602 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 6603 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 6604 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 6605 | |
| 6606 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 6607 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 6608 | |
| 6609 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 6610 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 6611 | |
| 6612 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 6613 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 6614 | |
|
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6615 |
|
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|
6616 def test_revisions_metadata(self): |
|
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|
6617 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
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|
6618 # was introduced in 1.9.2), or if configuration option |
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|
6619 # "CheckRevisions" is "False". Conventions for HTTP headers |
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|
6620 # related to revisions mimic CouchDB: |
|
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|
6621 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
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|
6622 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
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|
6623 |
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|
6624 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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|
6625 self.assertEqual('200', headers['status']) |
|
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|
6626 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
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|
6627 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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|
6628 |
|
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diff
changeset
|
6629 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
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|
6630 'If-None-Match' : '"aaa"' |
|
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|
6631 }) |
|
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diff
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|
6632 self.assertEqual('400', headers['status']) # Bad header format |
|
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|
6633 |
|
eb87ec525b53
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|
6634 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
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|
6635 'If-None-Match' : '"aaa-bbb"' |
|
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|
6636 }) |
|
eb87ec525b53
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diff
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|
6637 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
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|
6638 |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
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|
6639 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
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|
6640 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
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|
6641 }) |
|
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diff
changeset
|
6642 self.assertEqual('304', headers['status']) # Not modified |
|
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|
6643 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
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diff
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|
6644 self.assertEqual('', body) # Body must be empty on 304 status |
|
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diff
changeset
|
6645 |
|
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diff
changeset
|
6646 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
6647 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
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|
6648 }) |
|
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diff
changeset
|
6649 self.assertEqual('200', headers['status']) |
|
397
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diff
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|
6650 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
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diff
changeset
|
6651 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
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|
6652 |
|
eb87ec525b53
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diff
changeset
|
6653 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
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diff
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|
6654 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
6655 }) |
|
eb87ec525b53
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diff
changeset
|
6656 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
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diff
changeset
|
6657 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
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|
6658 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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diff
changeset
|
6659 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
6660 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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|
6661 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
6662 |
|
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diff
changeset
|
6663 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
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|
6664 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
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changeset
|
6665 |
|
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diff
changeset
|
6666 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
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|
6667 self.assertEqual('200', headers['status']) |
|
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|
6668 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
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changeset
|
6669 |
|
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diff
changeset
|
6670 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
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|
6671 self.assertEqual('200', headers['status']) |
|
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|
6672 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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changeset
|
6673 self.assertEqual('hello', body) |
|
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diff
changeset
|
6674 |
|
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diff
changeset
|
6675 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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changeset
|
6676 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
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changeset
|
6677 }) |
|
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changeset
|
6678 self.assertEqual('304', headers['status']) |
|
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diff
changeset
|
6679 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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changeset
|
6680 self.assertEqual('', body) |
|
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diff
changeset
|
6681 |
|
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diff
changeset
|
6682 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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|
6683 'If-None-Match' : '"1-tata"' |
|
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|
6684 }) |
|
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diff
changeset
|
6685 self.assertEqual('200', headers['status']) |
|
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changeset
|
6686 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
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|
6687 self.assertEqual('hello', body) |
|
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changeset
|
6688 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
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changeset
|
6689 |
|
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diff
changeset
|
6690 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
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|
6691 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
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changeset
|
6692 |
|
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diff
changeset
|
6693 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
6694 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
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changeset
|
6695 }) |
|
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changeset
|
6696 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
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testing revisions in metadata
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diff
changeset
|
6697 |
|
227d9a932467
testing revisions in metadata
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diff
changeset
|
6698 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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changeset
|
6699 'If-Match' : '0-tata' |
|
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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|
6700 }) |
|
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6701 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6702 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6703 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
6704 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
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changeset
|
6705 }) |
|
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diff
changeset
|
6706 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6707 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6708 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6709 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6710 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6711 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6712 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6713 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6714 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6715 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6716 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6717 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6718 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6719 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6720 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6721 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6722 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6723 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6724 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6725 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6726 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6727 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6728 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6729 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6730 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6731 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6732 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6733 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6734 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6735 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6736 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6737 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6738 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6739 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6740 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6741 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6742 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6743 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6744 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6745 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6746 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6747 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6748 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6749 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6750 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6751 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6752 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6753 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6754 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6755 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6756 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6757 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6758 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6759 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6760 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6761 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6762 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6763 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6764 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6765 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6766 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6767 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6768 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6769 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6770 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6771 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6772 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6773 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6774 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6775 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6776 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6777 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6778 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6779 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6780 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6781 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6782 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6783 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6784 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6785 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6786 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6787 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6788 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6789 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6790 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6791 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6792 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6793 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6794 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6795 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6796 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6797 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6798 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6799 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6800 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6801 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6802 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6803 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6804 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6805 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6806 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6807 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6808 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6809 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6810 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6811 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6812 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6813 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6814 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6815 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6816 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6817 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6818 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6819 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6820 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6821 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6822 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6823 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6824 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6825 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6826 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6827 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6828 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6829 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6830 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6831 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6832 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6833 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6834 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6835 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6836 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6837 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6838 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6839 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6840 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6841 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6842 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6843 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6844 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6845 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6846 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6847 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6848 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6849 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6850 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6851 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6852 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6853 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6854 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6855 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6856 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6857 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6858 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6859 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6860 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6861 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6862 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6863 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6864 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6865 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6866 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6867 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6868 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6869 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6870 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6871 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6872 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6873 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6874 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6875 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6876 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6877 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6878 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6879 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6880 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6881 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6882 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6883 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6884 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6885 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6886 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6887 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6888 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6889 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6890 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6891 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6892 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6893 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6894 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6895 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6896 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6897 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6898 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6899 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6900 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6901 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6902 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6903 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6904 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6905 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6906 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6907 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6908 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6909 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6910 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6911 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6912 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6913 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6914 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6915 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6916 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6917 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6918 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6919 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6920 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6921 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6922 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6923 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6924 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6925 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6926 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6927 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6928 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6929 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6930 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6931 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6932 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6933 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6934 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6935 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6936 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6937 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6938 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6939 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6940 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6941 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6942 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6943 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6944 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6945 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6946 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6947 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6948 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6949 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6950 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6951 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6952 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6953 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6954 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6955 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6956 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6957 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6958 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6959 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6960 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6961 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6962 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6963 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6964 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6965 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6966 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6967 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6968 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6969 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6970 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6971 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6972 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6973 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6974 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6975 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6976 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6977 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6978 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6979 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6980 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6981 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6982 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6983 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.23653.1620311964.865420", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6984 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6985 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6986 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6987 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6988 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.23653.1620311964.865418", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6989 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6990 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6991 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6992 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6993 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.23653.1620311964.865419", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6994 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6995 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6996 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6997 self.assertEqual("UN", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
6998 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
6999 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7000 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7001 self.assertEqual("QgA=", b["0008103E"]["InlineBinary"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7002 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
7003 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
7004 self.assertEqual(1, len(b["00081030"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
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397
diff
changeset
|
7005 self.assertEqual("UN", b["00081030"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7006 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
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7007 |
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cc947ddc57c5
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parents:
399
diff
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|
7008 def test_modify_attribute(self): |
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cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
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7009 # This fails on Orthanc <= 1.9.3 (not implemented) |
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cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7010 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
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cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
7011 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7012 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7013 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7014 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7015 |
|
cc947ddc57c5
test_modify_attribute
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parents:
399
diff
changeset
|
7016 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7017 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7018 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7019 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7020 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7021 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7022 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7023 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7024 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7025 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7026 self.assertEqual('0020,9056', tags['0020,9165']) |