Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 511:933fe1bbce4f
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| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Sat, 25 Mar 2023 12:30:14 +0100 |
| parents | fb900401be28 |
| children | e2ce0edb9002 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2023 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
| 34 | |
| 11 | 35 from PIL import ImageChops |
| 3 | 36 from Toolbox import * |
| 13 | 37 from xml.dom import minidom |
| 312 | 38 from datetime import datetime |
| 3 | 39 |
| 40 _LOCAL = None | |
| 41 _REMOTE = None | |
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42 _DOCKER = False |
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43 |
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44 |
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45 def SetOrthancParameters(local, remote, withinDocker): |
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46 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 47 _LOCAL = local |
| 48 _REMOTE = remote | |
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49 _DOCKER = withinDocker |
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50 |
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51 |
| 14 | 52 def ExtractDicomTags(rawDicom, tags): |
| 53 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 54 f.write(rawDicom) | |
| 55 f.flush() | |
| 45 | 56 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 57 |
| 58 result = [] | |
| 59 for tag in tags: | |
| 60 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 61 if match == None: | |
| 62 result.append('') | |
| 63 else: | |
| 64 result.append(match.group(1)) | |
| 65 | |
| 66 return result | |
| 67 | |
| 68 | |
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69 def CompareLists(a, b): |
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70 if len(a) != len(b): |
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71 return False |
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72 |
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73 for i in range(len(a)): |
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74 d = a[i] - b[i] |
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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76 return False |
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77 |
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78 return True |
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79 |
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80 |
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81 def CompareTags(a, b, tagsToIgnore): |
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82 for i in tagsToIgnore: |
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83 if i in a: |
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84 del a[i] |
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85 if i in b: |
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86 del b[i] |
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87 |
| 123 | 88 if a.keys() == b.keys(): |
| 89 return True | |
| 90 else: | |
| 91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 92 return False | |
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93 |
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94 |
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95 def CallFindScu(args): |
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96 p = subprocess.Popen([ FindExecutable('findscu'), |
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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99 stderr=subprocess.PIPE) |
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100 return p.communicate()[1] |
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101 |
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102 |
| 142 | 103 def GetMoveScuCommand(): |
| 104 return [ | |
| 105 FindExecutable('movescu'), | |
| 106 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 107 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 108 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 109 _REMOTE['Server'], | |
| 110 str(_REMOTE['DicomPort']) | |
| 111 ] | |
| 112 | |
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113 |
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114 def IsDicomUntilPixelDataStored(orthanc): |
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115 # This function detects whether the "StorageCompression" option is |
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116 # "true", OR the storage area does not support read-range |
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117 |
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118 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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119 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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120 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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121 if a != 0x03a0: |
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122 raise Exception('Internal error') |
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123 |
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124 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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125 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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126 raise Exception('Internal error') |
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127 |
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128 DoDelete(orthanc, '/instances/%s' % i) |
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129 |
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130 if len(a) == 1: |
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131 return False |
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132 elif 'dicom-until-pixel-data' in a: |
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133 return True |
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134 else: |
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135 raise Exception('Internal error') |
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136 |
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137 else: |
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138 return False |
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139 |
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140 |
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141 def CallMoveScu(args): |
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142 try: |
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143 subprocess.check_call(GetMoveScuCommand() + args, |
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144 stderr = subprocess.PIPE) |
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145 except subprocess.CalledProcessError as e: |
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146 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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147 # that has been introduced in DCMTK 3.6.2. This error code is |
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148 # expected by some tests that try and C-MOVE non-existing |
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149 # DICOM instances. |
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150 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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151 if e.returncode != 69: |
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152 raise e |
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153 |
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154 |
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155 def GenerateTestSequence(): |
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156 return [ |
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157 { |
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158 'StudyDescription': 'Hello^', |
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159 'ReferencedStudySequence' : [ |
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160 { |
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161 'StudyDescription': 'Toto', |
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162 }, |
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163 { |
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164 'StudyDescription': 'Tata', |
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165 }, |
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166 ] |
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167 }, |
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168 { |
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169 'StudyDescription': 'Sébastien^', |
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170 'StudyDate' : '19700202', |
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171 } |
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172 ] |
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173 |
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174 |
| 3 | 175 class Orthanc(unittest.TestCase): |
| 176 def setUp(self): | |
| 83 | 177 if (sys.version_info >= (3, 0)): |
| 178 # Remove annoying warnings about unclosed socket in Python 3 | |
| 179 import warnings | |
| 180 warnings.simplefilter("ignore", ResourceWarning) | |
| 181 | |
| 508 | 182 print('running : %s' % self.id()) |
| 183 | |
| 3 | 184 DropOrthanc(_LOCAL) |
| 185 DropOrthanc(_REMOTE) | |
| 174 | 186 UninstallLuaCallbacks(_REMOTE) |
|
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187 |
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188 # Reset stuff possibly set by some integration tests |
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189 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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190 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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191 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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192 |
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193 for i in [ 'toto', 'tata' ]: |
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194 if i in DoGet(_REMOTE, '/modalities'): |
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195 DoDelete(_REMOTE, '/modalities/%s' % i) |
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196 if i in DoGet(_REMOTE, '/peers'): |
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197 DoDelete(_REMOTE, '/peers/%s' % i) |
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198 |
| 312 | 199 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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200 |
|
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201 def AssertSameImages(self, truth, url): |
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202 im = GetImage(_REMOTE, url) |
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203 self.assertTrue(CompareLists(truth, im.getdata())) |
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204 |
| 3 | 205 |
| 206 def test_system(self): | |
| 177 | 207 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 208 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 209 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 210 | |
| 471 | 211 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 212 system = DoGet(_REMOTE, '/system') | |
| 213 self.assertIn("MainDicomTags", system) | |
| 214 self.assertIn("Patient", system["MainDicomTags"]) | |
| 472 | 215 self.assertIn("Study", system["MainDicomTags"]) |
| 471 | 216 self.assertIn("Series", system["MainDicomTags"]) |
| 217 self.assertIn("Instance", system["MainDicomTags"]) | |
| 218 | |
| 177 | 219 systemInfo = DoGet(_REMOTE, '/system') |
| 220 if systemInfo["Version"] == "mainline": | |
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221 print("Skipping version checks since you're currently in mainline") |
| 177 | 222 return |
| 223 | |
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224 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 7): |
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225 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
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226 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) |
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227 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) |
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228 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) |
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229 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) |
| 3 | 230 |
| 456 | 231 |
| 3 | 232 def test_upload(self): |
| 173 | 233 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 234 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 235 | |
| 236 sizeDummyCT = 2472 | |
| 237 sizeOverwrite = 2476 | |
| 238 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 239 | |
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240 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 241 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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242 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 243 self.assertEqual(instance, u['ID']) |
| 3 | 244 self.assertEqual('Success', u['Status']) |
| 173 | 245 |
| 183 | 246 if True: |
| 247 # New test for Orthanc 1.4.3 | |
| 248 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 249 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 250 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 251 | |
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252 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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253 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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254 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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255 j = 0 |
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256 else: |
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257 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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258 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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259 |
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260 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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261 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 262 |
| 263 if isCompressed: | |
| 264 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 265 else: | |
| 266 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 267 | |
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268 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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269 self.assertIn('Uuid', attachmentInfo) |
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270 self.assertEqual(1, attachmentInfo['ContentType']) |
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271 |
| 173 | 272 s = sizeDummyCT + j |
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273 |
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274 if isCompressed: |
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275 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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276 else: |
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277 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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278 |
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279 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 280 |
| 3 | 281 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 282 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 283 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 284 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 285 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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286 |
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287 if isCompressed: |
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288 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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289 else: |
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290 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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291 |
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292 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 293 |
| 294 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 295 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 296 self.assertEqual('KNIX', i['PatientName']) |
| 297 | |
| 298 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 299 # Overwriting | |
| 300 self.assertEqual('Success', u['Status']) | |
| 301 else: | |
| 302 self.assertEqual('AlreadyStored', u['Status']) | |
| 303 | |
| 304 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 305 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 306 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 307 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 308 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 309 | |
| 310 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 311 # Overwriting | |
| 312 self.assertEqual('Success', u['Status']) | |
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313 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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314 j2 = 0 |
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315 else: |
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316 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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317 self.assertNotEqual(j, j2) |
| 173 | 318 s2 = sizeOverwrite + j2 |
| 319 self.assertNotEqual(s, s2) | |
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320 if isCompressed: |
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321 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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322 else: |
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323 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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324 |
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325 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 326 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 327 self.assertEqual('ANOTHER', i['PatientName']) | |
| 328 else: | |
| 329 self.assertEqual('AlreadyStored', u['Status']) | |
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330 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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331 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 332 |
| 5 | 333 def test_upload_2(self): |
| 3 | 334 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 335 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 336 self.assertEqual(i, instance['ID']) | |
| 337 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 338 instance['MainDicomTags']['SOPInstanceUID']) | |
| 339 | |
| 340 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 341 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 342 series['MainDicomTags']['SeriesInstanceUID']) | |
| 343 | |
| 344 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 345 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 346 study['MainDicomTags']['StudyInstanceUID']) | |
| 347 | |
| 348 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 349 self.assertEqual('ozp00SjY2xG', | |
| 350 patient['MainDicomTags']['PatientID']) | |
| 351 | |
| 352 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 353 self.assertEqual(2472, len(dicom)) | |
| 354 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 355 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 356 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 357 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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358 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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359 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 360 |
| 361 | |
| 5 | 362 def test_images(self): |
| 363 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 364 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 365 |
| 5 | 366 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 367 self.assertEqual("L", im.mode) | |
| 368 self.assertEqual(512, im.size[0]) | |
| 369 self.assertEqual(358, im.size[1]) | |
| 370 | |
| 371 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 372 self.assertEqual("L", im.mode) | |
| 373 self.assertEqual(512, im.size[0]) | |
| 374 self.assertEqual(358, im.size[1]) | |
| 375 | |
| 376 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 377 self.assertEqual(512, im.size[0]) | |
| 378 self.assertEqual(358, im.size[1]) | |
| 379 | |
| 380 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 381 self.assertEqual("L", im.mode) | |
| 382 self.assertEqual(512, im.size[0]) | |
| 383 self.assertEqual(358, im.size[1]) | |
| 384 | |
| 385 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 386 self.assertEqual("L", im.mode) | |
| 387 self.assertEqual(512, im.size[0]) | |
| 388 self.assertEqual(358, im.size[1]) | |
| 389 | |
| 390 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 391 self.assertEqual(512, im.size[0]) | |
| 392 self.assertEqual(358, im.size[1]) | |
| 64 | 393 |
| 394 # This is Little Endian Explicit | |
| 395 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 396 | |
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397 def test_images_implicit_vr(self): |
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398 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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399 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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400 |
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401 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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402 self.assertEqual("RGB", im.mode) |
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403 self.assertEqual(800, im.size[0]) |
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404 self.assertEqual(600, im.size[1]) |
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405 |
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406 |
| 6 | 407 def test_hierarchy(self): |
| 408 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 409 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 410 UploadFolder(_REMOTE, 'Knee/T1') | |
| 411 UploadFolder(_REMOTE, 'Knee/T2') | |
| 412 | |
| 413 p = DoGet(_REMOTE, '/patients') | |
| 414 s = DoGet(_REMOTE, '/studies') | |
| 415 t = DoGet(_REMOTE, '/series') | |
| 416 self.assertEqual(2, len(p)) | |
| 417 self.assertEqual(2, len(s)) | |
| 418 self.assertEqual(4, len(t)) | |
| 419 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 420 | |
| 421 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 422 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 423 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 424 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 425 | |
| 426 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 427 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 428 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 429 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 430 | |
| 431 self.assertTrue(brainixPatient in p) | |
| 432 self.assertTrue(kneePatient in p) | |
| 433 self.assertTrue(brainixStudy in s) | |
| 434 self.assertTrue(kneeStudy in s) | |
| 435 self.assertTrue(brainixEpi in t) | |
| 436 self.assertTrue(brainixFlair in t) | |
| 437 self.assertTrue(kneeT1 in t) | |
| 438 self.assertTrue(kneeT2 in t) | |
| 439 | |
| 440 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 441 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 442 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 443 | |
| 444 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 445 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 446 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 447 | |
| 448 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 449 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 450 | |
| 451 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 452 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 453 | |
| 454 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 455 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 456 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 457 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 458 | |
| 459 for patient in p: | |
| 460 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 461 self.assertEqual(patient, study['ParentPatient']) | |
| 462 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 463 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 464 self.assertEqual('Unknown', series['Status']) |
| 6 | 465 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 466 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 467 | |
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468 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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469 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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470 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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471 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 472 |
| 473 | |
| 474 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 475 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 476 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 477 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 478 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 479 self.assertEqual(None, r) | |
| 480 | |
| 481 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 482 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 483 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 484 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 485 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 486 self.assertEqual('Study', r['Type']) | |
| 487 self.assertEqual(kneeStudy, r['ID']) | |
| 488 | |
| 489 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 490 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 491 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 492 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 493 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 494 self.assertEqual('Series', r['Type']) | |
| 495 self.assertEqual(kneeT1, r['ID']) | |
| 496 | |
| 497 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 498 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 499 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 500 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 501 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 502 self.assertEqual(None, r) | |
| 503 | |
| 504 DropOrthanc(_REMOTE) | |
| 505 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 506 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 507 |
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508 def test_delete_cascade(self): |
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509 # make sure deleting the last instance of a study deletes the series, study and patient |
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510 |
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511 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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512 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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513 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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514 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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515 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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516 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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517 |
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518 DoDelete(_REMOTE, '/instances/%s' % a) |
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519 |
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520 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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521 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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522 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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523 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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524 |
| 7 | 525 |
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526 def test_multiframe(self): |
| 7 | 527 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 528 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 529 | |
| 530 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 531 self.assertEqual("L", im.mode) | |
| 532 self.assertEqual(512, im.size[0]) | |
| 533 self.assertEqual(512, im.size[1]) | |
| 534 | |
| 535 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 536 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 537 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 538 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 539 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 540 | |
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541 |
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542 def test_changes(self): |
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543 # Check emptiness |
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544 c = DoGet(_REMOTE, '/changes') |
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545 self.assertEqual(0, len(c['Changes'])) |
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546 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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547 self.assertTrue(c['Done']) |
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548 c = DoGet(_REMOTE, '/changes?last') |
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549 self.assertEqual(0, len(c['Changes'])) |
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550 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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551 self.assertTrue(c['Done']) |
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552 |
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553 # Add 1 instance |
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554 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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555 c = DoGet(_REMOTE, '/changes') |
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556 begin = c['Last'] |
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557 self.assertEqual(4, len(c['Changes'])) |
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558 self.assertTrue(c['Done']) |
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559 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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560 |
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561 # Check the order in which the creation events are reported |
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562 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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563 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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564 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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565 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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566 |
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567 c = DoGet(_REMOTE, '/changes?last') |
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568 self.assertEqual(1, len(c['Changes'])) |
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569 self.assertEqual(begin, c['Last']) |
|
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|
570 self.assertTrue(c['Done']) |
|
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parents:
7
diff
changeset
|
571 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
|
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parents:
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diff
changeset
|
572 self.assertEqual(1, len(c['Changes'])) |
|
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parents:
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changeset
|
573 self.assertEqual(begin, c['Last']) |
|
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parents:
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diff
changeset
|
574 self.assertTrue(c['Done']) |
|
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parents:
7
diff
changeset
|
575 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
|
f8d781d1d267
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parents:
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diff
changeset
|
576 self.assertEqual(1, len(c['Changes'])) |
|
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parents:
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diff
changeset
|
577 self.assertEqual(begin - 1, c['Last']) |
|
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parents:
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changeset
|
578 self.assertFalse(c['Done']) |
|
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parents:
7
diff
changeset
|
579 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
|
f8d781d1d267
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changeset
|
580 self.assertEqual(1, len(c['Changes'])) |
|
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parents:
7
diff
changeset
|
581 self.assertEqual(begin - 2, c['Last']) |
|
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
582 self.assertFalse(c['Done']) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
583 |
|
f8d781d1d267
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parents:
7
diff
changeset
|
584 UploadFolder(_REMOTE, 'Knee/T1') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
585 UploadFolder(_REMOTE, 'Knee/T2') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
586 since = begin |
|
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parents:
7
diff
changeset
|
587 countPatients = 0 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
588 countStudies = 0 |
|
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test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
589 countSeries = 0 |
|
f8d781d1d267
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parents:
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diff
changeset
|
590 countInstances = 0 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
591 completed = 0 |
|
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
592 while True: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
593 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
594 since = c['Last'] |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
595 for i in c['Changes']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
596 if i['ResourceType'] == 'Instance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
597 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
598 if i['ResourceType'] == 'Patient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
599 countPatients += 1 |
|
f8d781d1d267
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parents:
7
diff
changeset
|
600 if i['ResourceType'] == 'Study': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
601 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
602 if i['ResourceType'] == 'Series': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
603 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
604 if i['ChangeType'] == 'NewInstance': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
605 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
606 if i['ChangeType'] == 'NewPatient': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
607 countPatients += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
608 if i['ChangeType'] == 'NewStudy': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
609 countStudies += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
610 if i['ChangeType'] == 'NewSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
611 countSeries += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
612 if i['ChangeType'] == 'CompletedSeries': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
613 completed += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
614 self.assertTrue('ID' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
615 self.assertTrue('Path' in i) |
|
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
616 self.assertTrue('Seq' in i) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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diff
changeset
|
617 if c['Done']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
618 break |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
619 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
620 self.assertEqual(2 * 50, countInstances) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
621 self.assertEqual(2 * 1, countPatients) |
|
f8d781d1d267
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changeset
|
622 self.assertEqual(2 * 1, countStudies) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
623 self.assertEqual(2 * 2, countSeries) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
624 self.assertEqual(0, completed) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
625 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
626 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
627 def test_archive(self): |
|
f8d781d1d267
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parents:
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diff
changeset
|
628 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
629 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 630 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 631 | |
| 632 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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test_changes, test_archive, test_media_archive
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changeset
|
633 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
634 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
635 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
636 self.assertEqual(2, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
637 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
638 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
639 self.assertEqual(1, len(z.namelist())) |
|
f8d781d1d267
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parents:
7
diff
changeset
|
640 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
641 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 642 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 643 | |
| 644 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
f8d781d1d267
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7
diff
changeset
|
645 self.assertEqual(2, len(z.namelist())) |
| 192 | 646 |
| 647 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 648 'Resources' : [ brainix, knee ] | |
| 649 }) | |
| 650 self.assertEqual(3, len(z.namelist())) | |
|
403
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
651 |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
652 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
653 'Synchronous' : True |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
654 }) |
|
e08e15befa0c
test sync POST to /archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
402
diff
changeset
|
655 self.assertEqual(2, len(z.namelist())) |
| 192 | 656 |
|
8
f8d781d1d267
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parents:
7
diff
changeset
|
657 |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
658 def test_media_archive(self): |
|
f8d781d1d267
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changeset
|
659 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f8d781d1d267
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7
diff
changeset
|
660 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
f8d781d1d267
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parents:
7
diff
changeset
|
661 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
662 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
f8d781d1d267
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diff
changeset
|
663 self.assertEqual(3, len(z.namelist())) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
664 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
665 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
666 self.assertTrue('DICOMDIR' in z.namelist()) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
667 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
668 try: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
669 os.remove('/tmp/DICOMDIR') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
670 except: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
671 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
672 pass |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
673 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
674 z.extract('DICOMDIR', '/tmp') |
| 45 | 675 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
7
diff
changeset
|
676 stderr = subprocess.STDOUT).split('\n') |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
677 self.assertEqual(3, len(a)) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
678 self.assertTrue(a[0].startswith('Warning')) |
|
f8d781d1d267
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
679 self.assertEqual('BasicDirectory', a[1]) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
680 self.assertEqual('', a[2]) |
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|
681 |
| 45 | 682 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
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|
683 stderr = subprocess.STDOUT).split('\n') |
|
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changeset
|
684 self.assertEqual(1, len(a)) |
|
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parents:
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changeset
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685 self.assertEqual('', a[0]) |
|
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parents:
7
diff
changeset
|
686 |
| 45 | 687 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
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|
688 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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parents:
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changeset
|
689 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
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parents:
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diff
changeset
|
690 |
|
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test_changes, test_archive, test_media_archive
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|
691 os.remove('/tmp/DICOMDIR') |
| 10 | 692 |
| 693 | |
| 694 def test_protection(self): | |
| 695 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 696 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 697 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 698 a = DoGet(_REMOTE, '/patients')[0] | |
| 699 b = DoGet(_REMOTE, '/patients')[1] | |
| 700 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 701 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 702 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 703 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 704 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 705 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 706 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 707 | |
| 708 | |
| 12 | 709 def test_raw_tags(self): |
| 10 | 710 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 711 | |
| 712 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 713 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 714 | |
| 715 s = '/instances/%s/content/' % i | |
| 716 | |
| 717 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 718 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 719 | |
| 720 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 721 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 722 | |
| 723 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 724 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 725 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 726 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 727 | |
| 728 for i in DoGet(_REMOTE, '/instances'): | |
| 729 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 730 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 731 | |
| 732 | |
| 733 def test_raw_tags_mdn(self): | |
| 734 # Bug reported by Cyril Paulus | |
| 735 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 736 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 737 | |
| 738 | |
| 739 def test_modify_instance(self): | |
| 740 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 741 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 742 json.dumps({ | |
| 743 "Replace" : { | |
| 744 "PatientName" : "hello", | |
| 745 #"PatientID" : "world" | |
| 746 }, | |
| 747 "Remove" : [ "StationName" ], | |
|
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test_bitbucket_issue_55
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parents:
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changeset
|
748 "RemovePrivateTags" : True |
| 10 | 749 }), |
| 750 'application/json') | |
| 751 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 752 | |
| 753 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 754 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 755 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 756 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 757 | |
| 758 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 759 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 760 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 761 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 762 | |
| 763 | |
| 764 def test_modify_series(self): | |
| 765 # Upload 4 images from the same series | |
| 766 for i in range(4): | |
| 767 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 768 | |
| 769 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 770 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 771 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 772 'application/json')['ID'] | |
| 773 | |
| 774 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 775 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 776 self.assertEqual(4, len(instances)) | |
| 777 for i in instances: | |
| 778 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 779 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 780 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 781 | |
| 782 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 783 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 784 | |
| 785 | |
| 786 def test_modify_study(self): | |
| 787 # Upload 4 images from the 2 series of the same study | |
| 788 for i in range(4): | |
| 789 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 790 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 791 | |
| 792 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 793 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 794 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 795 'application/json')['ID'] | |
| 796 | |
| 797 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 798 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 799 self.assertEqual(2, len(series)) | |
| 800 for s in series: | |
| 801 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 802 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 803 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 804 | |
| 805 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 806 for i in instances: | |
| 807 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 808 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 809 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 810 | |
| 811 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 812 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 813 | |
| 814 | |
| 815 def test_anonymize_series(self): | |
| 816 # Upload 4 images from the same series | |
| 817 for i in range(4): | |
| 818 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 819 | |
| 820 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 821 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 822 '{}', | |
| 823 'application/json')['ID'] | |
| 824 | |
| 825 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 826 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 827 self.assertEqual(4, len(instances)) | |
| 828 for i in instances: | |
| 829 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 830 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 831 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 832 | |
| 833 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 834 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 835 | |
| 836 | |
| 837 def test_anonymize_study(self): | |
| 838 # Upload 4 images from the 2 series of the same study | |
| 839 for i in range(4): | |
| 840 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 841 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 842 | |
| 843 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 844 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 845 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 846 'application/json')['ID'] | |
| 847 | |
| 848 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 849 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 850 self.assertEqual(2, len(series)) | |
| 851 for s in series: | |
| 852 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 853 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 854 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 855 | |
| 856 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 857 for i in instances: | |
| 858 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 859 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 860 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 861 | |
| 862 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 863 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 864 |
| 865 | |
| 866 | |
| 867 def test_storescu(self): | |
| 868 # Check emptiness | |
| 869 e = DoGet(_REMOTE, '/exports') | |
| 870 self.assertEqual(0, len(e['Exports'])) | |
| 871 self.assertEqual(0, e['Last']) | |
| 872 self.assertTrue(e['Done']) | |
| 873 e = DoGet(_REMOTE, '/exports?last') | |
| 874 self.assertEqual(0, len(e['Exports'])) | |
| 875 self.assertEqual(0, e['Last']) | |
| 876 self.assertTrue(e['Done']) | |
| 877 | |
| 878 # Add 1 instance | |
| 879 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 880 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 881 | |
| 882 # Export the instance | |
| 883 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 884 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 885 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 886 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 887 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 888 | |
| 889 e = DoGet(_REMOTE, '/exports') | |
| 890 self.assertEqual(1, len(e['Exports'])) | |
| 891 self.assertTrue(e['Done']) | |
| 892 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 893 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 894 self.assertEqual(1, len(e['Exports'])) | |
| 895 self.assertTrue(e['Done']) | |
| 896 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 897 e = DoGet(_REMOTE, '/exports?last') | |
| 898 self.assertEqual(1, len(e['Exports'])) | |
| 899 self.assertTrue(e['Done']) | |
| 900 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 901 seqInstance = e['Last'] | |
| 902 | |
| 903 # Export the series | |
| 904 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 905 | |
| 906 e = DoGet(_REMOTE, '/exports') | |
| 907 self.assertEqual(2, len(e['Exports'])) | |
| 908 self.assertTrue(e['Done']) | |
| 909 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 910 seqSeries = e['Last'] | |
| 911 self.assertNotEqual(seqInstance, seqSeries) | |
| 912 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 913 self.assertEqual(1, len(e['Exports'])) | |
| 914 self.assertFalse(e['Done']) | |
| 915 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 916 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 917 self.assertEqual(1, len(e['Exports'])) | |
| 918 self.assertTrue(e['Done']) | |
| 919 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 920 e = DoGet(_REMOTE, '/exports?last') | |
| 921 self.assertEqual(1, len(e['Exports'])) | |
| 922 self.assertTrue(e['Done']) | |
| 923 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 924 | |
| 925 # Export the study | |
| 926 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 927 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 928 | |
| 929 # Export the patient | |
| 930 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 931 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 932 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 933 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 934 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 935 | |
| 936 e = DoGet(_REMOTE, '/exports') | |
| 937 self.assertEqual(4, len(e['Exports'])) | |
| 938 self.assertTrue(e['Done']) | |
| 939 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 940 seqPatient = e['Last'] | |
| 941 self.assertNotEqual(seqInstance, seqSeries) | |
| 942 self.assertNotEqual(seqSeries, seqStudy) | |
| 943 self.assertNotEqual(seqStudy, seqPatient) | |
| 944 self.assertTrue(seqInstance < seqSeries) | |
| 945 self.assertTrue(seqSeries < seqStudy) | |
| 946 self.assertTrue(seqStudy < seqPatient) | |
| 947 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 948 self.assertEqual(1, len(e['Exports'])) | |
| 949 self.assertFalse(e['Done']) | |
| 950 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 951 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 952 self.assertEqual(1, len(e['Exports'])) | |
| 953 self.assertFalse(e['Done']) | |
| 954 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 955 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 956 self.assertEqual(1, len(e['Exports'])) | |
| 957 self.assertFalse(e['Done']) | |
| 958 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 959 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 960 self.assertEqual(1, len(e['Exports'])) | |
| 961 self.assertTrue(e['Done']) | |
| 962 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 963 e = DoGet(_REMOTE, '/exports?last') | |
| 964 self.assertEqual(1, len(e['Exports'])) | |
| 965 self.assertTrue(e['Done']) | |
| 966 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 967 | |
| 968 | |
| 969 # Check the content of the logged information | |
| 970 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 971 | |
| 972 if 'PatientID' in e[0]: | |
| 973 # Since Orthanc 0.8.6 | |
| 974 patient = 'PatientID' | |
| 975 study = 'StudyInstanceUID' | |
| 976 series = 'SeriesInstanceUID' | |
| 977 instance = 'SOPInstanceUID' | |
| 978 else: | |
| 979 # Up to Orthanc 0.8.5 | |
| 980 patient = 'PatientId' | |
| 981 study = 'StudyInstanceUid' | |
| 982 series = 'SeriesInstanceUid' | |
| 983 instance = 'SopInstanceUid' | |
| 984 | |
| 985 for k in range(4): | |
| 986 self.assertTrue('Date' in e[k]) | |
| 987 self.assertTrue('Seq' in e[k]) | |
| 988 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 989 | |
| 990 self.assertEqual(10, len(e[0])) | |
| 991 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 992 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 993 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 994 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 995 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 996 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 997 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 998 | |
| 999 self.assertEqual(9, len(e[1])) | |
| 1000 self.assertEqual('Series', e[1]['ResourceType']) | |
| 1001 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 1002 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 1003 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 1004 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 1005 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 1006 | |
| 1007 self.assertEqual(8, len(e[2])) | |
| 1008 self.assertEqual('Study', e[2]['ResourceType']) | |
| 1009 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 1010 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 1011 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1012 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1013 | |
| 1014 self.assertEqual(7, len(e[3])) | |
| 1015 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1016 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1017 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1018 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1019 | |
| 1020 DropOrthanc(_REMOTE) | |
| 1021 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1022 | |
| 1023 | |
| 1024 def test_store_peer(self): | |
| 1025 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1026 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1027 | |
| 1028 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1029 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1030 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1031 | |
| 1032 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1033 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1034 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1035 | |
| 1036 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1037 | |
| 1038 DropOrthanc(_REMOTE) | |
| 1039 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1040 | |
| 1041 | |
| 1042 def test_bulk_storescu(self): | |
| 1043 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1044 | |
| 1045 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1046 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1047 | |
| 1048 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1049 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1050 | |
| 1051 DropOrthanc(_LOCAL) | |
| 1052 | |
| 1053 # Send using patient's UUID | |
| 1054 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1055 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1056 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1057 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1058 | |
| 1059 | |
| 1060 def test_color(self): | |
| 1061 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1062 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1063 self.assertEqual("RGB", im.mode) | |
| 1064 self.assertEqual(41, im.size[0]) | |
| 1065 self.assertEqual(41, im.size[1]) | |
| 1066 | |
| 1067 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1068 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1069 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1070 | |
| 1071 | |
| 12 | 1072 def test_faking_ruby_put(self): |
| 1073 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1074 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1075 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1076 a = DoGet(_REMOTE, '/patients')[0] | |
| 1077 b = DoGet(_REMOTE, '/patients')[1] | |
| 1078 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1079 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1080 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1081 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1082 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1083 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1084 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1085 | |
| 1086 | |
| 1087 def test_faking_ruby_delete(self): | |
| 1088 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1089 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1090 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1091 a = DoGet(_REMOTE, '/patients')[0] | |
| 1092 b = DoGet(_REMOTE, '/patients')[1] | |
| 1093 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1094 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1095 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1096 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1097 | |
| 1098 | |
| 1099 def test_faking_google_put(self): | |
| 1100 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1101 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1102 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1103 a = DoGet(_REMOTE, '/patients')[0] | |
| 1104 b = DoGet(_REMOTE, '/patients')[1] | |
| 1105 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1106 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1107 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1108 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1109 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1110 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1111 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1112 | |
| 1113 | |
| 1114 def test_faking_google_delete(self): | |
| 1115 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1116 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1117 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1118 a = DoGet(_REMOTE, '/patients')[0] | |
| 1119 b = DoGet(_REMOTE, '/patients')[1] | |
| 1120 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1121 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1122 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1123 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1124 | |
| 1125 | |
| 1126 def test_lua(self): | |
| 1127 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1128 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1129 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1130 | |
| 1131 | |
| 1132 def test_metadata(self): | |
| 1133 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1134 p = DoGet(_REMOTE, '/patients')[0] | |
| 1135 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1136 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1137 |
| 1138 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
|
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1139 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1140 self.assertEqual(2, len(m)) |
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1141 self.assertTrue('MainDicomTagsSignature' in m) |
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1142 else: |
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1143 self.assertEqual(1, len(m)) |
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1144 self.assertTrue('LastUpdate' in m) |
| 12 | 1145 |
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1146 # The lines below failed on Orthanc <= 1.8.2 |
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1147 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1148 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1149 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1150 |
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1151 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1152 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1153 self.assertEqual(2, len(m)) |
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1154 self.assertTrue('MainDicomTagsSignature' in m) |
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1155 else: |
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1156 self.assertEqual(1, len(m)) |
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1157 self.assertTrue('LastUpdate' in m) |
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1158 |
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1159 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1160 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1161 self.assertEqual(3, len(m)) |
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1162 self.assertTrue('MainDicomTagsSignature' in m) |
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1163 else: |
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1164 self.assertEqual(2, len(m)) |
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1165 self.assertTrue('LastUpdate' in m) |
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1166 |
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1167 # New in Orthanc 1.9.0 |
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1168 self.assertTrue('RemoteAET' in m) |
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1169 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1170 |
| 12 | 1171 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
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1172 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1173 self.assertEqual(10, len(m)) |
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1174 self.assertTrue('MainDicomTagsSignature' in m) |
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1175 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1176 self.assertEqual(9, len(m)) |
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1177 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1178 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1179 else: |
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1180 self.assertEqual(8, len(m)) |
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1181 |
| 12 | 1182 self.assertTrue('IndexInSeries' in m) |
| 1183 self.assertTrue('ReceptionDate' in m) | |
| 1184 self.assertTrue('RemoteAET' in m) | |
|
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1185 self.assertTrue('Origin' in m) |
|
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1186 self.assertTrue('TransferSyntax' in m) |
|
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1187 self.assertTrue('SopClassUid' in m) |
| 145 | 1188 self.assertTrue('RemoteIP' in m) |
| 1189 self.assertTrue('HttpUsername' in m) | |
|
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1190 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1191 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1192 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
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1193 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1194 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1195 |
| 1196 # Play with custom metadata | |
|
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1197 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1198 self.assertEqual('200', headers['status']) |
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1199 self.assertEqual('', body) |
|
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1200 |
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1201 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
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1202 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1203 else: |
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1204 self.assertFalse('ETag' in headers) |
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1205 self.assertFalse('etag' in headers) |
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1206 |
| 12 | 1207 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1208 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1209 self.assertEqual(3, len(m)) |
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1210 self.assertTrue('MainDicomTagsSignature' in m) |
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1211 else: |
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1212 self.assertEqual(2, len(m)) |
| 12 | 1213 self.assertTrue('LastUpdate' in m) |
| 1214 self.assertTrue('5555' in m) | |
| 1215 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1216 |
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1217 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1218 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1219 'If-Match' : headers['etag'] |
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1220 }) |
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1221 else: |
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|
1222 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1223 |
|
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1224 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1225 self.assertEqual('200', headers['status']) |
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1226 self.assertEqual('hello', body) |
|
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1227 |
|
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1228 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1229 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
|
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|
1230 'If-Match' : headers['etag'] |
|
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1231 }) |
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1232 else: |
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|
1233 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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|
1234 |
| 12 | 1235 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
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|
1236 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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|
1237 self.assertEqual(2, len(m)) |
|
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|
1238 self.assertTrue('MainDicomTagsSignature' in m) |
|
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|
1239 else: |
|
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|
1240 self.assertEqual(1, len(m)) |
| 12 | 1241 self.assertTrue('LastUpdate' in m) |
| 13 | 1242 |
| 1243 | |
| 1244 def test_statistics(self): | |
| 1245 # Upload 16 instances | |
| 1246 for i in range(4): | |
| 1247 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1248 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1249 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1250 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1251 | |
| 1252 s = DoGet(_REMOTE, '/statistics') | |
| 1253 self.assertEqual(16, s['CountInstances']) | |
| 1254 self.assertEqual(2, s['CountPatients']) | |
| 1255 self.assertEqual(2, s['CountStudies']) | |
| 1256 self.assertEqual(4, s['CountSeries']) | |
| 1257 d = int(s['TotalUncompressedSize']) | |
| 1258 | |
| 1259 e = 0 | |
| 1260 for patient in DoGet(_REMOTE, '/patients'): | |
| 1261 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1262 self.assertEqual(8, s['CountInstances']) | |
| 1263 self.assertEqual(1, s['CountStudies']) | |
| 1264 self.assertEqual(2, s['CountSeries']) | |
| 1265 e += int(s['UncompressedSize']) | |
| 1266 | |
| 1267 for study in DoGet(_REMOTE, '/studies'): | |
| 1268 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1269 self.assertEqual(8, s['CountInstances']) | |
| 1270 self.assertEqual(2, s['CountSeries']) | |
| 1271 e += int(s['UncompressedSize']) | |
| 1272 | |
| 1273 for series in DoGet(_REMOTE, '/series'): | |
| 1274 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1275 self.assertEqual(4, s['CountInstances']) | |
| 1276 e += int(s['UncompressedSize']) | |
| 1277 | |
| 1278 self.assertEqual(3 * d, e) | |
| 1279 | |
| 1280 | |
| 1281 def test_custom_attachment(self): | |
|
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1282 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1283 |
| 13 | 1284 patient = DoGet(_REMOTE, '/patients')[0] |
| 1285 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1286 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1287 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1288 | |
| 1289 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1290 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
380
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|
1291 |
|
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|
1292 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1293 if IsDicomUntilPixelDataStored(_REMOTE): |
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1294 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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|
1295 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
443
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|
1296 |
|
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|
1297 # New in Orthanc 1.10.0 |
|
443
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|
1298 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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1299 self.assertEqual(2, len(a)) |
|
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1300 self.assertEqual(1, a['dicom']) |
|
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1301 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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1302 |
|
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1303 else: |
|
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|
1304 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
443
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|
1305 |
|
448
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|
1306 # New in Orthanc 1.10.0 |
|
443
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|
1307 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1308 self.assertEqual(1, len(a)) |
|
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|
1309 self.assertEqual(1, a['dicom']) |
|
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|
1310 else: |
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|
1311 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1312 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1313 |
|
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|
1314 # New in Orthanc 1.10.0 |
|
443
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|
1315 self.assertRaises(Exception, lambda: DoGet( |
|
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|
1316 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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|
1317 |
| 13 | 1318 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1319 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1320 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1321 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1322 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1323 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1324 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1325 | |
| 1326 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1327 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1328 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1329 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1330 size + | |
| 1331 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1332 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1333 | |
| 1334 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1335 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1336 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1337 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1338 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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|
1339 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
397
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|
1340 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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|
1341 }) |
|
393
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|
1342 |
|
394
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|
1343 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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|
1344 self.assertEqual('200', headers['status']) |
|
393
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|
1345 self.assertEqual('world2', body) |
| 13 | 1346 |
| 1347 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
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|
1348 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
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|
1349 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
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|
1350 }) |
| 13 | 1351 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1352 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1353 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1354 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1355 | |
| 1356 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
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|
1357 |
|
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1358 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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|
1359 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
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|
1360 'If-Match' : headers['etag'] |
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1361 }) |
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1362 else: |
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|
1363 self.assertFalse('etag' in headers) |
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|
1364 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
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|
1365 |
| 13 | 1366 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1367 | |
| 1368 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1369 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1370 | |
| 1371 | |
| 1372 def test_incoming_storescu(self): | |
| 1373 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1374 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
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diff
changeset
|
1375 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1376 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1377 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1378 | |
|
63
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|
1379 i = DoGet(_REMOTE, '/instances') |
|
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|
1380 self.assertEqual(1, len(i)) |
|
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changeset
|
1381 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
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1382 |
|
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|
1383 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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|
1384 self.assertEqual(10, len(m)) |
|
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changeset
|
1385 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
|
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|
1386 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
1387 self.assertEqual(9, len(m)) |
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changeset
|
1388 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
|
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1389 else: |
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1390 self.assertEqual(8, len(m)) |
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1391 |
|
63
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1392 self.assertTrue('IndexInSeries' in m) |
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1393 self.assertTrue('ReceptionDate' in m) |
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1394 self.assertTrue('RemoteAET' in m) |
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1395 self.assertTrue('Origin' in m) |
|
89
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1396 self.assertTrue('TransferSyntax' in m) |
|
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1397 self.assertTrue('SopClassUid' in m) |
| 145 | 1398 self.assertTrue('RemoteIP' in m) |
| 1399 self.assertTrue('CalledAET' in m) | |
|
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1400 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
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1401 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
|
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1402 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
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1403 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
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1404 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
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1405 |
|
369
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1406 series = DoGet(_REMOTE, '/series')[0] |
|
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1407 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
451
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1408 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1409 self.assertEqual(3, len(m)) |
|
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1410 self.assertTrue('MainDicomTagsSignature' in m) |
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1411 else: |
|
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1412 self.assertEqual(2, len(m)) |
|
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1413 self.assertTrue('LastUpdate' in m) |
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1414 self.assertTrue('RemoteAET' in m) |
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1415 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1416 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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1417 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
|
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1418 |
| 13 | 1419 |
| 1420 def test_incoming_findscu(self): | |
| 1421 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1422 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1423 | |
| 1424 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1425 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1426 self.assertEqual(2, len(patientNames)) | |
| 1427 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1428 self.assertTrue('Anonymized' in patientNames) | |
| 1429 | |
| 1430 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1431 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1432 self.assertEqual(2, len(series)) | |
| 1433 self.assertTrue('20070208' in series) | |
| 1434 self.assertTrue('19980312' in series) | |
| 1435 | |
|
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1436 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
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diff
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|
1437 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
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diff
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|
1438 self.assertEqual(1, len(series)) |
|
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diff
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|
1439 self.assertTrue('19980312' in series) |
|
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|
1440 |
| 13 | 1441 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1442 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1443 self.assertEqual(1, len(series)) | |
| 1444 | |
| 1445 # Test the "CaseSentitivePN" flag (false by default) | |
| 1446 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1447 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1448 self.assertEqual(1, len(series)) | |
|
66
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|
1449 |
| 70 | 1450 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1451 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1452 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1453 self.assertEqual(2, len(studies)) | |
| 1454 self.assertTrue('20070208' in studies) | |
| 1455 self.assertTrue('19980312' in studies) | |
| 1456 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1457 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1458 self.assertEqual(1, len(studies)) | |
| 1459 self.assertTrue('19980312' in studies) | |
| 1460 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1461 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1462 self.assertEqual(1, len(studies)) | |
| 1463 self.assertTrue('19980312' in studies) | |
|
326
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|
1464 |
|
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|
1465 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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|
1466 # was *not* the case in Orthanc <= 1.7.2 |
|
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|
1467 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
|
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|
1468 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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|
1469 self.assertEqual(2, len(instances)) |
|
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|
1470 self.assertEqual('ORTHANC', instances[0].strip()) |
|
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|
1471 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1472 |
| 1473 | |
|
191
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|
1474 def test_incoming_findscu_2(self): |
|
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1475 # This test fails if "LookupMode_DatabaseOnly" is used |
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1476 # (sequences are not available in this mode, and only main |
|
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1477 # DICOM tags are returned) |
|
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1478 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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1479 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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1480 |
|
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1481 # Test returning sequence values (only since Orthanc 0.9.5) |
|
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|
1482 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
|
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1483 sequences = re.findall('\(0008,2112\)', i) |
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1484 self.assertEqual(1, len(sequences)) |
|
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1485 |
|
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1486 # Test returning a non-main DICOM tag, |
|
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1487 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
|
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1488 # "MEDPC" in "ColorTestImageJ.dcm" |
|
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1489 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
|
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1490 tags = re.findall('\(0018,1010\).*MEDPC', i) |
|
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1491 self.assertEqual(1, len(tags)) |
|
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1492 |
|
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|
1493 |
|
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|
1494 def test_incoming_findscu_3(self): |
|
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1495 # This test fails if "LookupMode_DatabaseOnly" or |
|
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1496 # "LookupMode_DiskOnAnswer" is used, as |
|
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1497 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1498 # tag, as thus a constraint cannot be applied to it |
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1499 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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1500 |
|
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|
1501 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
|
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1502 sequences = re.findall('\(0018,1010\)', i) |
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1503 self.assertEqual(1, len(sequences)) |
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1504 |
|
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|
1505 |
| 13 | 1506 def test_incoming_movescu(self): |
| 1507 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1508 |
|
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1509 # No matching patient, so no job is created |
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1510 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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|
1511 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1512 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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|
1513 |
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|
1514 # 1 Matching patient, track the job |
| 138 | 1515 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1516 '--patient', | |
| 1517 '-k', '0008,0052=PATIENT', | |
| 1518 '-k', 'PatientID=12345678' | |
| 1519 ]))) | |
| 13 | 1520 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1521 | |
| 1522 | |
| 1523 def test_findscu(self): | |
| 1524 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1525 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1526 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1527 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1528 | |
| 1529 # Test the "find-patient" level | |
| 1530 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1531 self.assertEqual(1, len(p)) | |
| 1532 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1533 | |
| 1534 # Test wildcards constraints. The "LO" value representation | |
| 1535 # for PatientID is always case-sensitive, but the "PN" for | |
| 1536 # PatientName might depend on the implementation: | |
| 1537 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1538 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1539 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1540 self.assertEqual(1, len(p)) | |
| 1541 | |
| 1542 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1543 self.assertEqual(1, len(p)) | |
| 1544 | |
| 1545 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1546 self.assertEqual(1, len(p)) | |
| 1547 | |
| 1548 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1549 self.assertEqual(1, len(p)) | |
| 1550 | |
| 1551 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1552 self.assertEqual(0, len(p)) | |
| 1553 | |
| 1554 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1555 self.assertEqual(0, len(p)) | |
| 1556 | |
| 1557 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1558 self.assertEqual(0, len(p)) | |
| 1559 | |
| 1560 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1561 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1562 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1563 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1564 | |
| 1565 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1566 self.assertEqual(2, len(p)) | |
| 1567 | |
| 1568 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1569 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1570 self.assertEqual(1, len(s)) | |
| 1571 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1572 | |
| 1573 # Test range searches | |
| 1574 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1575 'StudyDate' : '-20070101' }) | |
| 1576 self.assertEqual(0, len(t)) | |
| 1577 | |
| 1578 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1579 'StudyDate' : '20090101-' }) | |
| 1580 self.assertEqual(0, len(t)) | |
| 1581 | |
| 1582 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1583 'StudyDate' : '20070101-' }) | |
| 1584 self.assertEqual(1, len(t)) | |
| 1585 | |
| 1586 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1587 'StudyDate' : '-20090101' }) | |
| 1588 self.assertEqual(1, len(t)) | |
| 1589 | |
| 1590 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1591 'StudyDate' : '20070207-20070207' }) | |
| 1592 self.assertEqual(0, len(t)) | |
| 1593 | |
| 1594 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1595 'StudyDate' : '20070208-20070208' }) | |
| 1596 self.assertEqual(1, len(t)) | |
| 1597 | |
| 1598 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1599 'StudyDate' : '20070209-20070209' }) | |
| 1600 self.assertEqual(0, len(t)) | |
| 1601 | |
| 1602 # Test the ModalitiesInStudy tag | |
| 1603 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1604 'PatientID' : 'B9uTHKOZ', | |
| 1605 'ModalitiesInStudy' : 'US' }) | |
| 1606 self.assertEqual(0, len(t)) | |
| 1607 | |
| 1608 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1609 'PatientID' : 'B9uTHKOZ', | |
| 1610 'ModalitiesInStudy' : 'CT' }) | |
| 1611 self.assertEqual(1, len(t)) | |
| 1612 | |
| 1613 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1614 'PatientID' : 'B9uTHKOZ', | |
| 1615 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1616 self.assertEqual(1, len(t)) | |
| 1617 | |
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1618 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1619 'PatientID' : 'B9uTHKOZ', |
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1620 'ModalitiesInStudy' : '' }) |
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1621 self.assertEqual(1, len(t)) |
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1622 |
| 13 | 1623 # Test the "find-series" level |
| 1624 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1625 'PatientID' : 'B9uTHKOZ', | |
| 1626 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1627 self.assertEqual(1, len(t)) | |
| 1628 | |
| 1629 # Test "\" separator | |
| 1630 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1631 'PatientID' : 'B9uTHKOZ', | |
| 1632 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1633 'Modality' : 'MR\\CT\\US' }) | |
| 1634 self.assertEqual(1, len(t)) | |
| 1635 | |
| 1636 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1637 'PatientID' : 'B9uTHKOZ', | |
| 1638 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1639 'Modality' : 'MR\\US' }) | |
| 1640 self.assertEqual(0, len(t)) | |
| 1641 | |
| 1642 | |
| 1643 def test_update_modalities(self): | |
| 1644 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1645 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1646 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1647 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1648 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1649 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
|
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1650 DoDelete(_REMOTE, '/modalities/tata') |
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1651 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1652 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
|
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1653 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1654 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1655 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1656 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1657 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1658 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1659 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1660 |
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1661 # New in Orthanc 1.8.1 |
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1662 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1663 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1664 |
| 13 | 1665 DoDelete(_REMOTE, '/modalities/toto') |
| 1666 DoDelete(_REMOTE, '/modalities/tata') | |
| 1667 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1668 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1669 | |
| 1670 | |
| 1671 def test_update_peers(self): | |
| 1672 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1673 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1674 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1675 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1676 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1677 'Username': 'user', | |
| 1678 'Password' : 'pass', | |
| 1679 'RemoteSelf' : 'self' }) | |
| 128 | 1680 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1681 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1682 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1683 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1684 |
| 1685 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1686 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1687 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1688 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1689 else: | |
| 1690 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1691 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1692 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1693 | |
| 128 | 1694 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1695 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1696 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1697 |
| 13 | 1698 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1699 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1700 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1701 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1702 |
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1703 # New in Orthanc 1.8.1 |
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1704 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1705 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1706 |
| 13 | 1707 DoDelete(_REMOTE, '/peers/toto') |
| 1708 DoDelete(_REMOTE, '/peers/tata') | |
| 1709 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1710 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1711 | |
| 1712 | |
| 1713 def test_mesterhazy_modification(self): | |
| 1714 # When I modify a series ( eg. curl | |
| 1715 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1716 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1717 # series is added to a new Study, instead of the existing | |
| 1718 # Study. Fixed in Orthanc 0.7.5 | |
| 1719 | |
| 1720 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1721 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1722 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1723 | |
| 1724 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1725 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1726 | |
| 1727 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1728 | |
| 1729 | |
| 1730 def test_create(self): | |
| 1731 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1732 json.dumps({ | |
| 1733 'PatientName' : 'Jodogne', | |
| 1734 'Modality' : 'CT', | |
| 58 | 1735 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1736 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1737 })) | |
| 1738 | |
| 1739 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1740 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1741 | |
| 1742 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1743 self.assertEqual((5, 5), png.size) | |
| 1744 | |
| 38 | 1745 j = DoGet(_REMOTE, i['Path']) |
| 1746 self.assertEqual('Instance', j['Type']) | |
| 1747 self.assertEqual(j['ID'], i['ID']) | |
| 1748 | |
| 13 | 1749 |
| 1750 def test_pilates(self): | |
| 1751 # "SCU failed error when accessing orthanc with osirix" by | |
| 1752 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1753 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1754 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1755 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1756 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1757 | |
| 1758 | |
| 1759 def test_shared_tags(self): | |
| 1760 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1761 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1762 p = DoGet(_REMOTE, '/patients')[0] | |
| 1763 | |
| 1764 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1765 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1766 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1767 |
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1768 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1769 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1770 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1771 |
| 13 | 1772 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1773 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1774 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1775 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1776 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1777 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1778 | |
| 1779 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1780 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1781 | |
| 1782 | |
| 1783 def test_modules(self): | |
| 1784 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1785 p = DoGet(_REMOTE, '/patients')[0] | |
| 1786 s = DoGet(_REMOTE, '/studies')[0] | |
| 1787 t = DoGet(_REMOTE, '/series')[0] | |
| 1788 | |
| 1789 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1790 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1791 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1792 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1793 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1794 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1795 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1796 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1797 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1798 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1799 | |
| 1800 | |
| 1801 def test_auto_directory(self): | |
| 1802 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1803 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1804 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1805 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1806 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1807 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1808 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1809 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1810 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1811 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1812 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1813 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1814 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1815 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1816 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1817 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1818 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1819 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1820 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1821 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1822 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1823 |
| 1824 | |
| 1825 def test_echo(self): | |
| 1826 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
|
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1827 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1828 |
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1829 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1830 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1831 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1832 |
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1833 # New in Orthanc 1.8.1 |
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1834 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1835 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1836 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1837 |
| 353 | 1838 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1839 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1840 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1841 'AET' : _REMOTE['DicomAet'], | |
| 1842 'Host' : _REMOTE['Server'], | |
| 1843 'Port' : _REMOTE['DicomPort'], | |
| 1844 'CheckFind' : True | |
| 1845 }) | |
| 1846 | |
| 13 | 1847 |
| 1848 def test_xml(self): | |
| 1849 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1850 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1851 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1852 self.assertEqual(len(items), len(json)) | |
| 1853 | |
| 1854 self.assertTrue('dicom-conformance' in json) | |
| 1855 | |
| 1856 ok = False | |
| 1857 for i in items: | |
| 1858 if i.childNodes[0].data == 'dicom-conformance': | |
| 1859 ok = True | |
| 1860 self.assertTrue(ok) | |
| 1861 | |
| 1862 | |
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1863 def test_googlecode_issue_16(self): |
| 13 | 1864 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1865 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1866 self.assertEqual('0018,1063', t) | |
| 1867 | |
| 1868 | |
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1869 def test_googlecode_issue_22(self): |
| 13 | 1870 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1871 a = [ | |
| 1872 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1873 "c69eee9a51eea3e8611e82e578897254", | |
| 1874 "315666be83e2d0111c77bc0996d84901", | |
| 1875 "3e27aa959d911172c48a1436443c72b1", | |
| 1876 "958642c9e7e9d232d3869faff546058c", | |
| 1877 "5e7ea8e3e4230cae707d143481355c59", | |
| 1878 "eda37f83558d858a596175aed8b2ad47", | |
| 1879 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1880 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1881 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1882 "e2f39e85896fe58876654b94cd0b5013", | |
| 1883 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1884 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1885 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1886 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1887 "806b8b3e300c615099c11a5ec23465aa", | |
| 1888 "7c836aa298ba6eef96434579af631a11", | |
| 1889 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1890 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1891 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1892 "44e6670f127e612a2b4aa60a0d207698", | |
| 1893 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1894 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1895 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1896 ] | |
| 1897 | |
| 1898 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1899 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1900 | |
| 1901 for i in range(len(a)): | |
| 1902 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1903 | |
| 1904 | |
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1905 def test_googlecode_issue_19(self): |
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1906 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1907 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1908 | |
| 1909 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1910 if not HasGdcmPlugin(_REMOTE): |
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1911 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1912 |
| 1913 | |
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1914 def test_googlecode_issue_37(self): |
| 13 | 1915 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1916 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1917 | |
| 1918 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1919 'CaseSensitive' : True, | |
| 1920 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1921 self.assertEqual(1, len(a)) | |
| 14 | 1922 |
| 1923 | |
| 1924 def test_rest_find(self): | |
| 1925 # Upload 8 instances | |
| 1926 for i in range(2): | |
| 1927 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1928 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1929 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1930 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1931 | |
| 1932 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1933 'CaseSensitive' : False, | |
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1934 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1935 self.assertEqual(1, len(a)) |
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1936 |
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1937 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1938 'CaseSensitive' : False, |
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1939 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1940 self.assertEqual(2, len(a)) |
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1941 |
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1942 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1943 'CaseSensitive' : False, |
| 14 | 1944 'Query' : { 'PatientName' : '*n*' }}) |
| 1945 self.assertEqual(2, len(a)) | |
| 1946 | |
| 1947 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1948 'CaseSensitive' : True, | |
| 1949 'Query' : { 'PatientName' : '*n*' }}) | |
| 1950 self.assertEqual(0, len(a)) | |
| 1951 | |
| 1952 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1953 'Level' : 'Patient', | |
| 1954 'CaseSensitive' : False, | |
| 1955 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1956 self.assertEqual(1, len(a)) | |
| 1957 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1958 | |
| 1959 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1960 'CaseSensitive' : True, | |
| 1961 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1962 self.assertEqual(0, len(a)) | |
| 1963 | |
| 1964 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1965 'CaseSensitive' : True, | |
| 1966 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1967 self.assertEqual(1, len(a)) | |
| 1968 | |
| 1969 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1970 'CaseSensitive' : True, | |
| 1971 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1972 self.assertEqual(2, len(a)) | |
| 1973 | |
| 1974 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1975 'CaseSensitive' : True, | |
| 1976 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1977 self.assertEqual(4, len(a)) | |
| 1978 | |
| 1979 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1980 self.assertEqual(2, len(a)) | |
| 1981 | |
| 1982 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1983 self.assertEqual(2, len(a)) | |
| 1984 | |
| 1985 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1986 self.assertEqual(4, len(a)) | |
| 1987 | |
| 1988 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1989 self.assertEqual(8, len(a)) | |
| 1990 | |
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1991 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1992 'Expand' : True, |
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1993 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1994 self.assertEqual(1, len(a)) |
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1995 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1996 |
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1997 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1998 'Expand' : True, |
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1999 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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2000 self.assertEqual(2, len(a)) |
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2001 for i in range(2): |
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2002 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2003 |
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2004 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2005 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2006 self.assertEqual(0, len(a)) |
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2007 |
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2008 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2009 'Expand' : True, |
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2010 'Query' : { 'StudyDate' : '-20061201' }}) |
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2011 self.assertEqual(1, len(a)) |
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2012 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2013 |
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2014 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2015 'Expand' : True, |
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2016 'Query' : { 'StudyDate' : '-20051201' }}) |
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2017 self.assertEqual(0, len(a)) |
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2018 |
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2019 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2020 'Expand' : True, |
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2021 'Query' : { 'StudyDate' : '20061201-' }}) |
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2022 self.assertEqual(2, len(a)) |
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2023 for i in range(2): |
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2024 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2025 |
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2026 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2027 'Expand' : True, |
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2028 'Query' : { 'StudyDate' : '20061202-' }}) |
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2029 self.assertEqual(1, len(a)) |
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2030 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2031 |
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2032 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2033 'Expand' : True, |
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2034 'Query' : { 'StudyDate' : '20080819-' }}) |
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2035 self.assertEqual(1, len(a)) |
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2036 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2037 |
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2038 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2039 'Expand' : True, |
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2040 'Query' : { 'StudyDate' : '20080820-' }}) |
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2041 self.assertEqual(0, len(a)) |
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2042 |
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2043 |
| 14 | 2044 |
| 2045 def test_rest_query_retrieve(self): | |
| 2046 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2047 | |
| 2048 # Upload 8 instances | |
| 2049 for i in range(2): | |
| 2050 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2051 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2052 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2053 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2054 | |
| 2055 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2056 for p in DoGet(_REMOTE, '/patients'): | |
| 2057 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2058 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2059 | |
| 2060 for q in DoGet(_REMOTE, '/queries'): | |
| 2061 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2062 | |
| 2063 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2064 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
|
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2065 |
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2066 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # TODO: check why this works with 0.8.6 and not with more recent versions |
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2067 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', |
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2068 'Query' : { |
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2069 'PatientName' : '*NE*', |
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2070 'StudyDate' : '*', |
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2071 }})['ID'] |
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2072 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
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2073 |
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2074 b = DoGet(_REMOTE, '/queries/%s' % a) |
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2075 self.assertTrue('answers' in b) |
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2076 self.assertTrue('level' in b) |
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2077 self.assertTrue('modality' in b) |
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2078 self.assertTrue('query' in b) |
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2079 self.assertTrue('retrieve' in b) |
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2080 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) |
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2081 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) |
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2082 |
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2083 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) |
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2084 self.assertEqual(2, len(q)) |
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2085 self.assertTrue('PatientName' in q) |
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2086 self.assertTrue('StudyDate' in q) |
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2087 self.assertEqual('*NE*', q['PatientName']) |
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2088 self.assertEqual('*', q['StudyDate']) |
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2089 |
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2090 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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2091 |
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2092 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) |
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2093 self.assertTrue('content' in s) |
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2094 self.assertTrue('retrieve' in s) |
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2095 |
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2096 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) |
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2097 self.assertEqual('887', s['PatientID']) |
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2098 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) |
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2099 |
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2100 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2101 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') |
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2102 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2103 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2104 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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2105 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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2106 |
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2107 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
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2108 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2109 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2110 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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2111 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
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2112 |
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2113 # New in Orthanc 1.4.3 |
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2114 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2115 self.assertEqual(2, len(s)) |
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2116 for i in range(2): |
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2117 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2118 self.assertEqual('887', s[i]['PatientID']) |
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2119 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2120 |
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2121 DoDelete(_REMOTE, '/queries/%s' % a) |
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2122 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) |
| 14 | 2123 |
| 2124 | |
| 2125 def test_parent(self): | |
| 2126 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2127 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2128 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2129 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2130 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2131 self.assertEqual(instance, u) |
| 14 | 2132 |
| 2133 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2134 self.assertEqual('Patient', a['Type']) | |
| 2135 self.assertEqual(patient, a['ID']) | |
| 2136 | |
| 2137 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2138 self.assertEqual('Patient', a['Type']) | |
| 2139 self.assertEqual(patient, a['ID']) | |
| 2140 | |
| 2141 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2142 self.assertEqual('Study', a['Type']) | |
| 2143 self.assertEqual(study, a['ID']) | |
| 2144 | |
| 2145 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2146 self.assertEqual('Patient', a['Type']) | |
| 2147 self.assertEqual(patient, a['ID']) | |
| 2148 | |
| 2149 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2150 self.assertEqual('Study', a['Type']) | |
| 2151 self.assertEqual(study, a['ID']) | |
| 2152 | |
| 2153 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2154 self.assertEqual('Series', a['Type']) | |
| 2155 self.assertEqual(series, a['ID']) | |
| 2156 | |
| 2157 | |
| 2158 def test_shanon(self): | |
| 2159 def Anonymize(instance, replacements = {}): | |
| 119 | 2160 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2161 'Replace' : replacements, | |
| 2162 'Force' : True, | |
| 2163 }, 'application/json') | |
| 14 | 2164 |
| 2165 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2166 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2167 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2168 | |
| 2169 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2170 ids = [ 'ozp00SjY2xG', | |
| 2171 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2172 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2173 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2174 | |
| 2175 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2176 for i in range(4): | |
| 2177 self.assertNotEqual(ids[i], a[i]) | |
| 2178 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2179 | |
| 2180 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2181 for i in range(4): | |
| 2182 self.assertNotEqual(ids[i], a[i]) | |
| 2183 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2184 | |
| 2185 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2186 self.assertEqual('instance', a[3]) | |
| 2187 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2188 | |
| 2189 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2190 self.assertEqual('series', a[2]) | |
| 2191 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2192 | |
| 2193 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2194 self.assertEqual('study', a[1]) | |
| 2195 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2196 | |
| 2197 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2198 self.assertEqual('patient', a[0]) | |
| 2199 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2200 | |
| 2201 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2202 'StudyInstanceUID' : 'study', | |
| 2203 'SeriesInstanceUID' : 'series', | |
| 2204 'SOPInstanceUID' : 'instance' }), tags) | |
| 2205 self.assertEqual('patient', a[0]) | |
| 2206 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2207 | |
| 2208 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2209 | |
| 2210 | |
| 2211 def test_shanon_2(self): | |
| 2212 def Modify(instance, replacements = {}): | |
| 119 | 2213 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2214 'Replace' : replacements, | |
| 2215 'Force': True, | |
| 2216 }, 'application/json') | |
| 14 | 2217 |
| 2218 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2219 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2220 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2221 | |
| 2222 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2223 ids = [ 'ozp00SjY2xG', | |
| 2224 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2225 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2226 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2227 | |
| 2228 a = ExtractDicomTags(Modify(u), tags) | |
| 2229 self.assertEqual(ids[0], a[0]) | |
| 2230 self.assertEqual(ids[1], a[1]) | |
| 2231 self.assertEqual(ids[2], a[2]) | |
| 2232 self.assertNotEqual(ids[3], a[3]) | |
| 2233 self.assertEqual(0, len(a[4])) | |
| 2234 | |
| 2235 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2236 self.assertEqual(ids[0], a[0]) | |
| 2237 self.assertEqual(ids[1], a[1]) | |
| 2238 self.assertEqual(ids[2], a[2]) | |
| 2239 self.assertEqual('instance', a[3]) | |
| 2240 | |
| 2241 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2242 self.assertEqual(ids[0], a[0]) | |
| 2243 self.assertEqual(ids[1], a[1]) | |
| 2244 self.assertEqual('series', a[2]) | |
| 2245 self.assertNotEqual(ids[3], a[3]) | |
| 2246 | |
| 2247 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2248 self.assertEqual(ids[0], a[0]) | |
| 2249 self.assertEqual('study', a[1]) | |
| 2250 self.assertNotEqual(ids[2], a[2]) | |
| 2251 self.assertNotEqual(ids[3], a[3]) | |
| 2252 | |
| 2253 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2254 self.assertEqual('patient', a[0]) | |
| 2255 self.assertNotEqual(ids[1], a[1]) | |
| 2256 self.assertNotEqual(ids[2], a[2]) | |
| 2257 self.assertNotEqual(ids[3], a[3]) | |
| 2258 | |
| 2259 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2260 'StudyInstanceUID' : 'study', | |
| 2261 'SeriesInstanceUID' : 'series', | |
| 2262 'SOPInstanceUID' : 'instance' }), tags) | |
| 2263 self.assertEqual('patient', a[0]) | |
| 2264 self.assertEqual('study', a[1]) | |
| 2265 self.assertEqual('series', a[2]) | |
| 2266 self.assertEqual('instance', a[3]) | |
| 2267 | |
| 2268 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2269 | |
| 2270 | |
| 2271 def test_instances_tags(self): | |
| 2272 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2273 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2274 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2275 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2276 | |
| 2277 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2278 self.assertEqual(2, len(i)) | |
| 2279 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2280 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2281 | |
| 2282 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2283 self.assertEqual(2, len(i)) | |
| 2284 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2285 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2286 | |
| 2287 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2288 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2289 self.assertEqual(1, len(i)) | |
| 2290 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2291 | |
| 2292 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2293 self.assertEqual(1, len(i)) | |
| 2294 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2295 | |
|
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diff
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|
2296 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
|
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diff
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|
2297 self.assertEqual(1, len(i)) |
|
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diff
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|
2298 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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|
2299 |
| 14 | 2300 |
| 2301 def test_lookup(self): | |
| 2302 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2303 self.assertEqual(0, len(a)) | |
| 2304 | |
| 2305 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2306 | |
| 2307 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2308 self.assertEqual(1, len(a)) | |
| 2309 self.assertEqual('Patient', a[0]['Type']) | |
| 2310 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2311 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2312 | |
| 2313 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2314 self.assertEqual(1, len(a)) | |
| 2315 self.assertEqual('Study', a[0]['Type']) | |
| 2316 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2317 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2318 | |
| 2319 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2320 self.assertEqual(1, len(a)) | |
| 2321 self.assertEqual('Series', a[0]['Type']) | |
| 2322 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2323 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2324 | |
| 2325 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2326 self.assertEqual(1, len(a)) | |
| 2327 self.assertEqual('Instance', a[0]['Type']) | |
| 2328 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2329 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2330 | |
| 2331 DropOrthanc(_REMOTE) | |
| 2332 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2333 self.assertEqual(0, len(a)) | |
| 2334 | |
| 15 | 2335 |
| 2336 def test_autorouting(self): | |
| 2337 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2338 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2339 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2340 | |
| 2341 # Check that this version is >= 0.8.0 | |
| 2342 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2343 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2344 | |
| 2345 UploadInstance(_REMOTE, knee1) | |
| 2346 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2347 | |
| 2348 DropOrthanc(_REMOTE) | |
| 2349 DropOrthanc(_LOCAL) | |
| 174 | 2350 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2351 UploadInstance(_REMOTE, knee1) |
| 2352 UploadInstance(_REMOTE, knee2) | |
| 2353 UploadInstance(_REMOTE, other) | |
| 2354 WaitEmpty(_REMOTE) | |
| 174 | 2355 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2356 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2357 | |
| 2358 DropOrthanc(_REMOTE) | |
| 2359 DropOrthanc(_LOCAL) | |
| 174 | 2360 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2361 UploadInstance(_REMOTE, knee1) |
| 2362 UploadInstance(_REMOTE, knee2) | |
| 2363 UploadInstance(_REMOTE, other) | |
| 2364 WaitEmpty(_REMOTE) | |
| 174 | 2365 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2366 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2367 | |
| 2368 DropOrthanc(_REMOTE) | |
| 2369 DropOrthanc(_LOCAL) | |
| 174 | 2370 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2371 UploadInstance(_REMOTE, knee1) |
| 2372 WaitEmpty(_REMOTE) | |
| 174 | 2373 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2374 i = DoGet(_LOCAL, '/instances') |
| 2375 self.assertEqual(1, len(i)) | |
| 2376 | |
| 2377 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2378 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2379 f.flush() | |
| 45 | 2380 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2381 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2382 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2383 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2384 |
| 2385 | |
| 2386 def test_storescu_rf(self): | |
| 2387 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2388 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2389 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2390 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2391 |
| 2392 | |
| 2393 def test_anonymize_instance(self): | |
| 2394 def AnonymizeAndUpload(instanceId, parameters): | |
| 2395 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2396 'application/json'), 'application/dicom')['ID'] | |
| 2397 | |
| 2398 def ModifyAndUpload(instanceId, parameters): | |
| 2399 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2400 'application/json'), 'application/dicom')['ID'] | |
| 2401 | |
| 2402 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2403 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2404 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2405 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2406 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2407 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2408 | |
| 2409 b = AnonymizeAndUpload(a, '{}') | |
| 2410 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2411 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2412 | |
| 2413 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2414 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2415 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2416 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2417 | |
| 2418 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2419 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2420 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2421 | |
| 2422 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2423 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2424 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2425 | |
| 2426 # Examples from the Wiki | |
|
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parents:
117
diff
changeset
|
2427 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2428 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2429 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2430 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2431 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2432 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2433 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2434 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2435 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2436 | |
|
118
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test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2437 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2438 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2439 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2440 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2441 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2442 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2443 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2444 | |
|
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test_bitbucket_issue_55
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parents:
117
diff
changeset
|
2445 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2446 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2447 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2448 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2449 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2450 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2451 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2452 | |
| 2453 | |
| 2454 # Test modify non-existing | |
| 2455 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2456 json.dumps({ | |
| 2457 'PatientName' : 'Jodogne', | |
| 2458 'Modality' : 'CT', | |
| 2459 }))['ID'] | |
| 2460 | |
| 2461 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2462 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2463 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2464 | |
| 2465 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2466 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2467 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2468 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2469 | |
|
21
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tests of image decoding
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18
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|
2470 |
|
2a29bcff60a7
tests of image decoding
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diff
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|
2471 def test_incoming_jpeg(self): |
|
463
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diff
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|
2472 # since this test fails regularly on CI, enable verbosity |
|
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457
diff
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|
2473 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
|
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|
2474 |
|
468
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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diff
changeset
|
2475 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
61
967d44407308
test UnknownSopClassAccepted option
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parents:
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diff
changeset
|
2476 if acceptUnknownSopClassUid: |
|
967d44407308
test UnknownSopClassAccepted option
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diff
changeset
|
2477 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
|
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test UnknownSopClassAccepted option
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|
2478 else: |
|
967d44407308
test UnknownSopClassAccepted option
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diff
changeset
|
2479 tmp = [ '-xs' ] |
|
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test UnknownSopClassAccepted option
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diff
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|
2480 |
|
468
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changeset
|
2481 while retries > 0: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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diff
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|
2482 retries -= 1 |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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diff
changeset
|
2483 with open(os.devnull, 'w') as FNULL: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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parents:
465
diff
changeset
|
2484 try: |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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diff
changeset
|
2485 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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diff
changeset
|
2486 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2487 GetDatabasePath(image) ], |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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465
diff
changeset
|
2488 stderr = FNULL) |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
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diff
changeset
|
2489 |
|
e1867aeb57e2
retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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diff
changeset
|
2490 if expectSuccess: |
|
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diff
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|
2491 return |
|
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retries storescu if it succeeds while it should fail
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diff
changeset
|
2492 except subprocess.CalledProcessError as e: |
|
e1867aeb57e2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2493 print('storescu failed with error code: %s' % str(e.returncode)) |
|
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retries storescu if it succeeds while it should fail
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changeset
|
2494 if not expectSuccess: |
|
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2495 raise e |
|
21
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18
diff
changeset
|
2496 |
|
2a29bcff60a7
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diff
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|
2497 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
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|
2498 |
|
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|
2499 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
|
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|
2500 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
|
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|
2501 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
|
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|
2502 ]) |
|
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|
2503 self.assertTrue('1.2.840.10008.1.2' in a) |
|
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|
2504 self.assertTrue('1.2.840.10008.1.2.1' in a) |
|
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|
2505 self.assertTrue('1.2.840.10008.1.2.2' in a) |
|
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|
2506 self.assertEqual(3, len(a)) |
|
f673153f27a4
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|
2507 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
|
f673153f27a4
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|
2508 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
|
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|
2509 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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|
2510 else: |
|
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|
2511 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
|
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|
2512 |
| 490 | 2513 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
|
468
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retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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changeset
|
2514 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
|
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retries storescu if it succeeds while it should fail
Alain Mazy <am@osimis.io>
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465
diff
changeset
|
2515 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
21
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tests of image decoding
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18
diff
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|
2516 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
373
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|
2517 |
|
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|
2518 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2519 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
f673153f27a4
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diff
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|
2520 self.assertGreaterEqual(42, len(a)) |
|
f673153f27a4
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|
2521 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
f673153f27a4
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diff
changeset
|
2522 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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|
2523 else: |
|
f673153f27a4
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diff
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|
2524 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
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diff
changeset
|
2525 |
|
62
f9c4ce95756f
removal of useless information
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parents:
61
diff
changeset
|
2526 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2527 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2528 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2529 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
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18
diff
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|
2530 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2531 # set back normal verbosity |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2532 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
21
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parents:
18
diff
changeset
|
2533 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2534 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2535 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2536 |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2537 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2538 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2539 | |
| 2540 # This is JPEG lossless | |
|
136
5634ef96fcc5
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133
diff
changeset
|
2541 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2542 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
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diff
changeset
|
2543 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2544 |
|
21
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parents:
18
diff
changeset
|
2545 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2546 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2547 |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2548 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
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tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
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parents:
18
diff
changeset
|
2552 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 |
|
2a29bcff60a7
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18
diff
changeset
|
2554 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2557 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 |
|
2a29bcff60a7
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18
diff
changeset
|
2559 |
|
2a29bcff60a7
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18
diff
changeset
|
2560 def test_pixel_data(self): |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2561 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
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parents:
18
diff
changeset
|
2562 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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18
diff
changeset
|
2563 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
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18
diff
changeset
|
2564 |
|
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18
diff
changeset
|
2565 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
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18
diff
changeset
|
2566 colorSize = 1000 * 1000 * 3 |
|
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18
diff
changeset
|
2567 jpegSize = 51918 |
|
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18
diff
changeset
|
2568 |
|
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18
diff
changeset
|
2569 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
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diff
changeset
|
2570 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
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diff
changeset
|
2571 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
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diff
changeset
|
2572 |
|
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diff
changeset
|
2573 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
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diff
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|
2574 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
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diff
changeset
|
2575 |
|
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diff
changeset
|
2576 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
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diff
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|
2577 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
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diff
changeset
|
2578 |
|
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diff
changeset
|
2579 |
|
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diff
changeset
|
2580 def test_decode_brainix(self): |
|
2a29bcff60a7
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18
diff
changeset
|
2581 brainix = [ |
|
2a29bcff60a7
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diff
changeset
|
2582 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2583 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
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diff
changeset
|
2584 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
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diff
changeset
|
2585 ] |
|
2a29bcff60a7
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18
diff
changeset
|
2586 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2587 maxValue = 426.0 |
|
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18
diff
changeset
|
2588 |
|
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diff
changeset
|
2589 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2590 for i in brainix: |
|
2a29bcff60a7
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18
diff
changeset
|
2591 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
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diff
changeset
|
2592 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
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tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2593 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2594 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2595 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2618 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2619 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2620 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2621 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2622 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2623 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2624 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2625 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2626 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2627 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2628 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2629 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2630 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2631 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2632 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2633 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2634 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2635 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2636 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2637 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2638 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2639 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2640 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2641 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2642 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2643 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2644 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2645 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2646 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2647 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2648 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2649 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2650 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2651 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2652 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2653 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2654 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2655 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2656 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2657 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2658 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2659 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2660 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2661 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2662 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2663 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2664 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2665 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2666 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2667 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2668 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2669 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2670 |
| 2671 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2672 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
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|
2673 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2674 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2675 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
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parents:
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diff
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|
2676 |
| 22 | 2677 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2678 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2679 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2680 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2681 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2682 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2683 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
2684 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2685 |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2686 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2687 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2688 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2689 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2690 |
|
dbcbffb889da
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2691 |
| 22 | 2692 def test_encodings(self): |
| 23 | 2693 # Latin-1 (ISO_IR 100) |
| 22 | 2694 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2695 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2696 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2697 |
| 2698 # Latin-2 (ISO_IR 101) | |
| 2699 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2700 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2701 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2702 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2703 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2704 | |
|
26
040f6ef1394a
test_storescu_custom_aet
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parents:
23
diff
changeset
|
2705 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2706 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2707 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2708 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2709 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2710 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2711 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2712 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2713 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2714 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2715 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2716 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2717 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2718 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2719 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2720 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2721 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2722 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2723 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2724 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2725 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2726 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2727 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2728 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2729 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2730 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2731 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2732 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2733 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2734 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2735 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2736 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2737 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2738 |
| 174 | 2739 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2740 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2741 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2742 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2743 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2744 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2745 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2746 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2747 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2748 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2749 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2750 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2751 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2752 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
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28
diff
changeset
|
2753 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2754 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2755 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2756 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2757 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2758 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2759 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2760 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2761 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2762 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2763 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2764 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2765 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2766 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2767 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2768 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2769 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2770 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2771 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2772 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2773 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2774 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2775 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2776 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2777 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2778 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2779 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2780 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2781 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2782 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2783 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2784 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2785 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2786 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2787 s = {} |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2788 since = 0 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2789 while True: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2790 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2791 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2792 break |
|
1047d7bc5210
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2793 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2794 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2795 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2796 s[i] = None |
|
1047d7bc5210
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parents:
28
diff
changeset
|
2797 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2798 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2799 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2800 self.assertTrue(instance in s) |
| 36 | 2801 |
| 2802 | |
| 2803 def test_create_pdf(self): | |
| 2804 # Upload 4 instances | |
| 2805 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2806 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2807 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2808 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2809 | |
| 2810 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2811 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2812 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2813 | |
| 2814 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2815 pdf = f.read() | |
| 2816 | |
| 2817 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2818 json.dumps({ | |
| 2819 'Tags' : { | |
| 2820 'PatientName' : 'Jodogne', | |
| 2821 'Modality' : 'CT', | |
| 2822 }, | |
| 2823 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2824 })) | |
| 2825 | |
| 2826 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2827 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2828 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2829 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 2830 |
| 2831 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2832 self.assertEqual(len(b), len(pdf) + 1) | |
| 2833 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2834 | |
| 2835 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2836 json.dumps({ | |
| 2837 'Parent' : brainixPatient, | |
| 2838 'Tags' : { | |
| 2839 'PatientName' : 'Jodogne', | |
| 2840 } | |
| 2841 }))) | |
| 2842 | |
| 2843 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2844 json.dumps({ | |
| 2845 'Parent' : brainixPatient, | |
| 2846 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2847 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2848 })) | |
| 2849 | |
| 2850 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2851 | |
| 2852 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2853 json.dumps({ | |
| 2854 'Parent' : brainixStudy, | |
| 2855 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2856 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2857 })) | |
| 2858 | |
| 2859 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2860 | |
| 2861 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2862 json.dumps({ | |
| 2863 'Parent' : brainixEpi, | |
| 37 | 2864 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2865 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2866 })) | |
| 2867 | |
| 2868 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2869 | |
| 2870 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2871 self.assertEqual(len(b), len(pdf)) | |
| 2872 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2873 | |
| 2874 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2875 |
| 2876 | |
| 2877 def test_create_series(self): | |
| 2878 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2879 json.dumps({ | |
| 2880 'Tags' : { | |
| 40 | 2881 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2882 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2883 'Modality' : 'CT', |
| 2884 }, | |
| 2885 'Content' : [ | |
| 40 | 2886 { |
| 2887 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2888 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2889 }, | |
| 38 | 2890 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2891 ] | |
| 2892 })) | |
| 2893 | |
| 2894 s = DoGet(_REMOTE, i['Path']) | |
| 2895 self.assertEqual('Series', s['Type']) | |
| 2896 self.assertEqual(s['ID'], i['ID']) | |
| 2897 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2898 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2899 self.assertEqual('Complete', s['Status']) | |
| 40 | 2900 |
| 2901 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2902 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2903 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2904 if 'ImageComments' in a: | |
| 2905 self.assertEqual('Tutu', a['ImageComments']) | |
| 2906 else: | |
| 2907 self.assertEqual('Tutu', b['ImageComments']) | |
| 2908 | |
| 2909 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2910 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2911 'Sébastien Jodogne') | |
| 47 | 2912 |
| 2913 | |
| 2914 def test_create_binary(self): | |
| 2915 binary = ''.join(map(chr, range(256))) | |
| 2916 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2917 tags = { | |
| 2918 'PatientName' : 'Jodogne', | |
| 2919 '8899-8899' : encoded | |
| 2920 } | |
| 2921 | |
| 2922 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2923 json.dumps({ | |
| 266 | 2924 'Tags' : tags, |
| 2925 'PrivateCreator' : 'TestBinary', | |
| 47 | 2926 })) |
| 2927 | |
| 2928 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2929 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2930 | |
| 2931 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2932 json.dumps({ | |
| 2933 'InterpretBinaryTags' : False, | |
| 266 | 2934 'Tags' : tags, |
| 2935 'PrivateCreator' : 'TestBinary', | |
| 47 | 2936 })) |
| 2937 | |
| 2938 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2939 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2940 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2941 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2942 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2943 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2944 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2945 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2946 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2947 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2948 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2949 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2950 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2951 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2952 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2953 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2954 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2955 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2956 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2957 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2958 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2959 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2960 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2961 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2962 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2963 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2964 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2965 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2966 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2967 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2968 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2969 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2970 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2971 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2972 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2973 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2974 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2975 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2976 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2977 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2978 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2979 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2980 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2981 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2982 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2983 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2984 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2985 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2986 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2987 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2988 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2989 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2990 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2991 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2992 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2993 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2994 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2995 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2996 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2997 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2998 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2999 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3000 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3001 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3002 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3003 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3004 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3005 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3006 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3007 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3008 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3009 json.dumps({ |
|
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diff
changeset
|
3010 'Tags' : { |
|
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diff
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|
3011 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
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|
3012 'PatientName': 'Jodogne^', |
|
51
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diff
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|
3013 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
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|
3014 } |
|
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|
3015 }))['ID'] |
|
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|
3016 |
|
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changeset
|
3017 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
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|
3018 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
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diff
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|
3019 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
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|
3020 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
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|
3021 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
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|
3022 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
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|
3023 |
|
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changeset
|
3024 |
|
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changeset
|
3025 def test_modify_sequence(self): |
|
264a20a0276d
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|
3026 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
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diff
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|
3027 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
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|
3028 |
|
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|
3029 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
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diff
changeset
|
3030 json.dumps({ |
|
264a20a0276d
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diff
changeset
|
3031 "Replace" : { |
|
264a20a0276d
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|
3032 "PatientName" : "hello", |
|
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|
3033 'ReferencedStudySequence': GenerateTestSequence(), |
|
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diff
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|
3034 }, |
|
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diff
changeset
|
3035 }), |
|
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|
3036 'application/json') |
|
264a20a0276d
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diff
changeset
|
3037 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
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diff
changeset
|
3038 DoDelete(_REMOTE, '/instances/%s' % i) |
|
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|
3039 |
| 52 | 3040 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3041 | |
| 3042 | |
| 3043 def test_compression(self): | |
| 3044 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3045 | |
|
380
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|
3046 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
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|
3047 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
3048 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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|
3049 self.assertEqual(1, len(aa)) |
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|
3050 self.assertTrue('dicom' in aa) |
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|
3051 else: |
|
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|
3052 self.assertEqual(2, len(aa)) |
|
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|
3053 self.assertTrue('dicom' in aa) |
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|
3054 self.assertTrue('dicom-as-json' in aa) |
|
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|
3055 |
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|
3056 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
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|
3057 |
|
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changeset
|
3058 # If "StorageCompression" is enabled in the Orthanc to be |
|
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|
3059 # tested, uncompress the attachment before running the test |
|
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|
3060 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
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changeset
|
3061 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3062 |
|
380
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|
3063 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
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|
3064 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
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|
3065 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
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|
3066 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
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|
3067 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3068 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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changeset
|
3069 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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changeset
|
3070 |
|
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changeset
|
3071 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3072 self.assertTrue('compress' in ops) |
| 3073 self.assertTrue('uncompress' in ops) | |
| 3074 self.assertTrue('is-compressed' in ops) | |
|
380
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changeset
|
3075 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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changeset
|
3076 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3077 |
|
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changeset
|
3078 # Re-compress the attachment |
|
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changeset
|
3079 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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changeset
|
3080 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3081 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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changeset
|
3082 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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|
3083 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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|
3084 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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changeset
|
3085 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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changeset
|
3086 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3087 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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|
3088 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3089 |
|
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changeset
|
3090 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
|
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|
3091 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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changeset
|
3092 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3093 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3094 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3095 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3096 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3097 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3098 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3099 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3100 |
| 3101 | |
| 3102 def test_ordered_slices(self): | |
| 3103 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3104 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3105 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3106 self.assertEqual('Sequence', o['Type']) | |
| 3107 self.assertEqual(1, len(o['Dicom'])) | |
| 3108 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3109 self.assertEqual(76, len(o['Slices'])) | |
| 3110 for j in range(76): | |
| 3111 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3112 | |
| 68 | 3113 self.assertEqual(1, len(o['SlicesShort'])) |
| 3114 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3115 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3116 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3117 | |
| 53 | 3118 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3119 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3120 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3121 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3122 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3123 | |
| 3124 self.assertEqual('Volume', o['Type']) | |
| 3125 self.assertEqual(3, len(o['Dicom'])) | |
| 3126 self.assertEqual(3, len(o['Slices'])) | |
| 3127 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3128 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3129 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3130 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3131 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3132 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3133 | |
| 68 | 3134 self.assertEqual(3, len(o['SlicesShort'])) |
| 3135 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3136 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3137 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3138 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3139 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3140 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3141 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3142 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3143 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3144 | |
| 53 | 3145 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3146 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3147 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3148 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3149 | |
| 3150 self.assertEqual('Sequence', o['Type']) | |
| 3151 self.assertEqual(2, len(o['Dicom'])) | |
| 3152 self.assertEqual(2, len(o['Slices'])) | |
| 3153 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3154 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3155 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3156 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3157 |
| 68 | 3158 self.assertEqual(2, len(o['SlicesShort'])) |
| 3159 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3160 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3161 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3162 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3163 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3164 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3165 | |
| 3166 | |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3167 |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3168 def test_incoming_movescu_accession(self): |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3169 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3170 |
|
137
412d5f70447e
testing asynchronous c-move
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parents:
136
diff
changeset
|
3171 # No matching patient, so no job is created |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3172 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3173 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3174 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3175 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3176 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
3177 |
|
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
3178 # 1 Matching patient, track the job |
| 138 | 3179 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3180 '--study', | |
| 3181 '-k', '0008,0052=STUDY', | |
| 3182 '-k', 'AccessionNumber=A10003245599' | |
| 3183 ]))) | |
|
137
412d5f70447e
testing asynchronous c-move
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parents:
136
diff
changeset
|
3184 |
|
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3185 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3186 |
| 55 | 3187 |
| 3188 def test_dicom_to_json(self): | |
| 3189 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3190 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3191 |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3192 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3193 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3194 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3195 # Tags for compatibility with DCMTK 3.6.0 |
| 3196 'RETIRED_OtherPatientIDs', | |
| 3197 'OtherPatientIDs', | |
| 3198 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3199 ])) |
| 55 | 3200 |
| 3201 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3202 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3203 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3204 ])) |
| 55 | 3205 |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3206 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3207 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3208 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3209 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3210 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3211 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3212 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3213 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
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parents:
369
diff
changeset
|
3214 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3215 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3216 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3217 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3218 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3219 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3220 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3221 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3222 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3223 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3224 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3225 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3226 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3227 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3228 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3229 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3230 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3231 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3232 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3233 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3234 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3235 self.assertEqual(aa, tt) |
| 57 | 3236 |
| 3237 | |
| 3238 def test_batch_archive(self): | |
| 3239 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3240 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3241 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3242 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3243 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3244 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3245 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3246 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3247 | |
| 3248 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3249 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3250 self.assertEqual(0, len(z.namelist())) | |
| 3251 | |
| 3252 # One patient | |
| 3253 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3254 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3255 self.assertEqual(4, len(z.namelist())) | |
| 3256 | |
| 3257 # One patient + twice its study + one series from other patient | |
| 3258 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3259 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3260 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3261 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3262 ]) | |
| 3263 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3264 self.assertEqual(6, len(z.namelist())) | |
| 3265 | |
| 3266 # One patient + one series + one instance | |
| 3267 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3268 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3269 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3270 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3271 ]) | |
| 3272 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3273 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3274 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3275 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3276 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3277 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3278 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3279 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3280 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3281 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3282 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3283 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3284 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3285 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3286 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3287 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3288 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3289 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3290 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3291 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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diff
changeset
|
3292 |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3293 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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58
diff
changeset
|
3294 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
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parents:
58
diff
changeset
|
3295 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3296 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3297 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3298 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3299 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3300 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3301 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3302 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3303 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3304 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3305 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3306 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3307 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3308 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3309 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3310 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3311 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3312 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3313 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3314 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3315 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3316 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3317 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3318 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3319 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3320 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3321 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3322 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3323 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3324 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3325 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3326 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3327 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3328 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3329 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3330 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3331 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3332 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3333 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3334 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3335 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3336 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3337 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3338 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3339 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3340 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3341 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3342 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3343 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3344 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3345 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3346 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3347 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3348 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3349 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3350 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3351 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3352 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3353 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3354 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3355 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3356 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3357 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3358 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3359 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3360 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3361 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3362 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3363 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3364 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3365 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3366 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3367 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3368 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3369 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3370 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3371 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3372 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3373 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3374 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3375 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3376 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3377 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3378 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3379 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3380 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3381 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3382 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3383 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3384 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3385 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3386 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3387 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3388 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3389 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3390 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3391 self.assertTrue('PT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3392 self.assertTrue('CT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3393 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3394 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
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3395 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
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3396 self.assertEqual(1, len(s)) |
|
176
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3397 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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|
3398 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
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3399 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
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|
3400 |
|
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|
3401 |
|
78
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diff
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|
3402 def test_decode_transfer_syntax(self): |
|
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3403 def Check(t, md5): |
|
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|
3404 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
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3405 |
|
89
74b7b9aed5f8
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diff
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|
3406 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
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|
3407 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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diff
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|
3408 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
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3409 |
|
78
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|
3410 if md5 == None: |
|
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diff
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|
3411 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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|
3412 else: |
|
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|
3413 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
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|
3414 self.assertEqual(m, md5) |
|
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74
diff
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|
3415 |
|
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diff
changeset
|
3416 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
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|
3417 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
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|
3418 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
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|
3419 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
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test_decode_transfer_syntax
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|
3420 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3421 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3422 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3423 | |
| 3424 # The 3 checks below don't work on big-endian | |
| 3425 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
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diff
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|
3426 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
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|
3427 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
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diff
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|
3428 |
|
c2144cf4bd83
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changeset
|
3429 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3430 if not HasGdcmPlugin(_REMOTE): |
|
299
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|
3431 Check('1.2.840.10008.1.2.4.90', None) |
|
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|
3432 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3433 |
| 3434 | |
| 3435 def test_raw_frame(self): | |
| 3436 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3437 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3438 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3439 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3440 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3441 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3442 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3443 | |
| 3444 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3445 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3446 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3447 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3448 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3449 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3450 self.assertEqual("L", im.mode) | |
| 3451 self.assertEqual(512, im.size[0]) | |
| 3452 self.assertEqual(512, im.size[1]) | |
| 3453 | |
| 3454 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3455 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3456 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3457 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3458 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3459 self.assertEqual(69214, len(a)) | |
| 3460 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3461 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3462 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3463 self.assertEqual("RGB", im.mode) | |
| 3464 self.assertEqual(512, im.size[0]) | |
| 3465 self.assertEqual(512, im.size[1]) | |
| 323 | 3466 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3467 self.assertEqual("RGB", im.mode) |
| 3468 self.assertEqual(512, im.size[0]) | |
| 3469 self.assertEqual(512, im.size[1]) | |
| 81 | 3470 |
| 3471 | |
| 3472 | |
| 3473 def test_rest_movescu(self): | |
| 3474 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3475 | |
| 3476 # Upload 4 instances | |
| 3477 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3478 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3479 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3480 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3481 | |
| 3482 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3483 for p in DoGet(_REMOTE, '/patients'): | |
| 3484 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3485 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3486 | |
| 3487 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3488 | |
|
482
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|
3489 # Move instance Brainix/Flair/IM-0001-0001.dcm |
|
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|
3490 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
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|
3491 'Level' : 'Instance', |
|
535e651e70a2
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diff
changeset
|
3492 'Resources' : [ |
|
535e651e70a2
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diff
changeset
|
3493 { |
|
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diff
changeset
|
3494 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3495 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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diff
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|
3496 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3497 } |
|
535e651e70a2
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diff
changeset
|
3498 ]}) |
|
535e651e70a2
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diff
changeset
|
3499 |
|
535e651e70a2
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changeset
|
3500 # Move series Brainix/Flair/* |
| 81 | 3501 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 3502 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3503 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3504 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3505 | |
|
482
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|
3506 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
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|
3507 # Reset and test asynchronous C-Move at instance level |
|
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changeset
|
3508 for p in DoGet(_REMOTE, '/patients'): |
|
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|
3509 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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diff
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|
3510 |
|
535e651e70a2
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changeset
|
3511 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
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|
3512 'Level' : 'Instance', |
|
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diff
changeset
|
3513 'Resources' : [ |
|
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|
3514 { |
|
535e651e70a2
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diff
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|
3515 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3516 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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|
3517 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3518 } |
|
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|
3519 ], |
|
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|
3520 'Asynchronous': True |
|
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|
3521 }) |
|
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|
3522 |
|
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|
3523 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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|
3524 (_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
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|
3525 'Level' : 'Instance', |
|
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diff
changeset
|
3526 'Resources' : [ |
|
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|
3527 { |
|
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|
3528 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
3529 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
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|
3530 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
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|
3531 } |
|
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|
3532 ], |
|
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|
3533 'Asynchronous': True |
|
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|
3534 })) |
|
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|
3535 |
|
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|
3536 self.assertNotEqual(None, job) |
|
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|
3537 |
|
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|
3538 # check the job was successfull |
|
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changeset
|
3539 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
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|
3540 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
changeset
|
3541 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
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|
3542 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
3543 |
|
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|
3544 # check the job content |
|
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changeset
|
3545 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
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|
3546 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
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diff
changeset
|
3547 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3548 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3549 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3550 # Reset and test synchronous C-Move at series level |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3551 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3552 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3553 |
| 81 | 3554 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3555 'Resources' : [ | |
| 3556 { | |
| 3557 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3558 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3559 } | |
| 3560 ]}) | |
| 3561 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3562 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3563 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3564 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3565 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3566 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3567 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3568 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3569 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3570 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3571 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3572 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3573 'Level' : 'Series', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3574 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3575 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3576 'PatientID' : '5Yp0E', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3577 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3578 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3579 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3580 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3581 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3582 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3583 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3584 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3585 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3586 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3587 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3588 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3589 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3590 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3591 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3592 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3593 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3594 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3595 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3596 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3597 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3598 # Move series Brainix/Epi/* |
| 81 | 3599 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3600 'Resources' : [ | |
| 3601 { | |
| 3602 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3603 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3604 } | |
| 3605 ]}) | |
| 3606 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3607 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3608 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3609 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3610 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3611 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3612 # Move study Knee asynchronously |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3613 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3614 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3615 'Level' : 'Study', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3616 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3617 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3618 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3619 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3620 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3621 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3622 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3623 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3624 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3625 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3626 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3627 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3628 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3629 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3630 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3631 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3632 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3633 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3634 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
| 81 | 3635 |
| 3636 # Reset | |
| 3637 for p in DoGet(_REMOTE, '/patients'): | |
| 3638 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3639 | |
| 3640 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3641 | |
| 3642 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3643 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3644 # Move all at once asynchronously at PatientLevel |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3645 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3646 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3647 'Level' : 'Patient', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3648 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3649 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3650 'PatientID' : '5Yp0E', |
| 81 | 3651 }, |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3652 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3653 'PatientID': '887', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3654 'PatientName' : 'KNEE', |
| 81 | 3655 } |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3656 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3657 'Synchronous': False |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3658 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3659 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3660 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3661 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3662 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3663 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
| 81 | 3664 |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3665 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3666 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3667 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3668 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3669 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3670 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3671 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3672 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3673 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3674 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3675 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3676 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3677 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3678 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3679 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3680 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3681 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3682 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3683 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3684 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3685 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3686 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3687 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3688 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3689 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3690 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3691 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3692 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3693 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3694 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3695 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3696 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3697 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3698 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3699 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3700 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3701 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3702 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3703 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3704 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3705 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3706 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3707 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3708 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3709 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3710 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3711 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3712 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3713 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3714 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3715 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3716 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3717 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3718 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3719 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3720 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3721 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3722 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3723 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3724 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3725 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3726 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3727 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3728 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3729 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3730 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3731 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3732 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3733 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3734 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3735 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3736 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3737 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3738 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3739 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3740 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3741 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3742 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3743 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3744 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3745 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3746 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3747 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3748 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3749 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3750 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3751 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3752 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3753 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3754 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3755 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3756 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3757 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3758 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3759 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3760 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3761 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3762 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3763 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3764 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3765 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3766 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3767 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3768 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3769 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3770 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3771 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3772 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3773 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3774 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3775 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3776 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3777 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3778 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3779 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3780 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3781 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3782 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3783 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3784 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3785 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3786 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3787 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3788 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3789 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3790 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3791 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3792 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3793 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3794 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3795 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3796 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3797 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3798 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3799 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3800 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3801 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3802 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3803 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3804 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3805 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3806 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3807 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3808 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3809 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3810 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3811 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3812 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3813 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3814 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3815 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3816 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3817 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3818 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3819 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3820 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3821 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3822 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3823 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3824 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3825 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3826 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3827 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3828 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3829 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3830 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3831 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3832 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3833 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3834 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3835 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3836 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3837 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3838 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3839 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3840 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3841 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3842 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3843 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3844 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3845 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3846 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3847 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3848 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3849 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3850 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3851 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3852 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3853 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3854 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3855 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3856 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3857 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3858 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3859 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3860 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3861 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3862 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3863 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3864 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3865 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3866 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3867 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3868 }, |
| 119 | 3869 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3870 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3871 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3872 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3873 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3874 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3875 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3876 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3877 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3878 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3879 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3880 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3881 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3882 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3883 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3884 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3885 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3886 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3887 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3888 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3889 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3890 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3891 # metadata before reconstruct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3892 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3893 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3894 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3895 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3896 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3897 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3898 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3899 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3900 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3901 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3902 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3903 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3904 # metadata after reconstruct should have been preserved |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3905 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3906 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3907 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3908 self.assertEqual(mba, maa) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
3909 self.assertEqual(mbb, mab) |
|
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3910 |
|
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
3911 |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
3912 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
| 104 | 3913 def test_httpClient_lua(self): |
| 496 | 3914 retries = 4 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3915 result = '' |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3916 |
| 104 | 3917 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
| 496 | 3918 scriptContent = f.read() |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3919 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3920 while retries > 0 and not ('OK' in result): |
| 496 | 3921 print("Executing lua script HttpClient.lua") |
| 3922 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
3923 retries -= 1 |
| 102 | 3924 |
| 3925 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3926 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3927 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3928 def test_bitbucket_issue_44(self): |
| 319 | 3929 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3930 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3931 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3932 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3933 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3934 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3935 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3936 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3937 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3938 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3939 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3940 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3941 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3942 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3943 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3944 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3945 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3946 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3947 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3948 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3949 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3950 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3951 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3952 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3953 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3954 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3955 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3956 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3957 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3958 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3959 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3960 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3961 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3962 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3963 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3964 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3965 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3966 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3967 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3968 def test_bitbucket_issue_42(self): |
| 319 | 3969 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3970 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3971 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3972 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3973 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3974 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3975 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3976 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3977 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3978 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3979 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3980 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3981 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3982 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3983 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3984 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3985 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3986 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3987 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3988 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3989 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3990 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3991 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3992 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3993 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3994 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3995 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3996 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3997 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3998 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3999 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4000 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4001 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4002 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4003 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4004 'Since' : 2, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4005 'Limit' : 4 }) |
|
3e5934363e76
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112
diff
changeset
|
4006 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4007 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4008 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4009 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4010 'Limit' : 3 }) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4011 self.assertEqual(3, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4012 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4013 b = [] |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4014 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4015 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
4016 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4017 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4018 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4019 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4020 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4021 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4022 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
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parents:
112
diff
changeset
|
4023 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4024 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4025 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4026 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4027 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4028 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4029 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4030 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4031 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4032 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4033 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4034 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4035 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4036 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4037 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4038 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4039 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4040 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4041 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4042 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4043 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4044 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
4045 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4046 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4047 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4048 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4049 # "PHI remaining after anonymization" |
| 319 | 4050 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
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test_bitbucket_issue_46
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113
diff
changeset
|
4051 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4052 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4053 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4054 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4055 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4056 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4057 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4058 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4059 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4060 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4061 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4062 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4063 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4064 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4065 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4066 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4067 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4068 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4069 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4070 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4071 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4072 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4073 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4074 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4075 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4076 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4077 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4078 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4079 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4080 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4081 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4082 self.assertFalse('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4083 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4084 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4085 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4086 t[value['Name']] = value['Value'] |
|
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test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4087 |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4088 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
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test_bitbucket_issue_46
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113
diff
changeset
|
4089 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
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diff
changeset
|
4090 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
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test_bitbucket_issue_46
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diff
changeset
|
4091 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
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113
diff
changeset
|
4092 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
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test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
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113
diff
changeset
|
4093 |
|
45ebfab035b7
test_bitbucket_issue_46
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113
diff
changeset
|
4094 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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diff
changeset
|
4095 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
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diff
changeset
|
4096 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
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diff
changeset
|
4097 f.flush() |
|
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diff
changeset
|
4098 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
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113
diff
changeset
|
4099 stderr = subprocess.STDOUT).split('\n') |
|
118
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diff
changeset
|
4100 |
|
a954c535fef6
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diff
changeset
|
4101 |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
changeset
|
4102 def test_bitbucket_issue_55(self): |
|
a954c535fef6
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changeset
|
4103 def Run(modify, query): |
|
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diff
changeset
|
4104 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
4105 |
|
a954c535fef6
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diff
changeset
|
4106 operation = 'modify' if modify else 'anonymize' |
|
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changeset
|
4107 |
|
a954c535fef6
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diff
changeset
|
4108 self.assertRaises(Exception, lambda: DoPost( |
|
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diff
changeset
|
4109 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
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diff
changeset
|
4110 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
4111 |
|
a954c535fef6
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diff
changeset
|
4112 query["Force"] = True |
|
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diff
changeset
|
4113 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4114 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4115 DoDelete(_REMOTE, a) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4116 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4117 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4118 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4119 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4120 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4121 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4122 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4123 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4124 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4125 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4126 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4127 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4128 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4129 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4130 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4131 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4132 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4133 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4134 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4135 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4136 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4137 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4138 # is set to "false" (default value). |
| 319 | 4139 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4140 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4141 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4142 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4143 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4144 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4145 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4146 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4147 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4148 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4149 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4150 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4151 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4152 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4153 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4154 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4155 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4156 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4157 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4158 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4159 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4160 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4161 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4162 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4163 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4164 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4165 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4166 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4167 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4168 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4169 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4170 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4171 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4172 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4173 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4174 |
| 125 | 4175 |
| 4176 def test_gbk_alias(self): | |
| 4177 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4178 # This test fails on Orthanc <= 1.3.0 | |
| 4179 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4180 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4181 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4182 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4183 |
| 4184 | |
| 4185 def test_long_tag(self): | |
| 4186 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4187 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4188 | |
| 4189 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4190 self.assertTrue('0018,1020' in tags) | |
| 4191 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4192 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4193 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4194 | |
| 4195 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4196 self.assertTrue('0018,1020' in tags) | |
| 4197 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4198 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4199 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4200 | |
| 4201 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4202 self.assertTrue('SoftwareVersions' in tags) | |
| 4203 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4204 self.assertTrue('HeartRate' in tags) | |
| 4205 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4206 | |
| 4207 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4208 self.assertTrue('SoftwareVersions' in tags) | |
| 4209 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4210 | |
| 4211 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4212 self.assertTrue('SoftwareVersions' in tags) | |
| 4213 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4214 | |
| 4215 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4216 self.assertTrue('SoftwareVersions' in tags) | |
| 4217 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4218 | |
| 4219 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4220 self.assertEqual(1, len(tags)) | |
| 4221 self.assertTrue(i in tags.keys()) | |
| 4222 self.assertTrue('0018,1020' in tags[i]) | |
| 4223 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4224 | |
| 4225 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4226 self.assertEqual(1, len(tags)) | |
| 4227 self.assertTrue(i in tags.keys()) | |
| 4228 self.assertTrue('0018,1020' in tags[i]) | |
| 4229 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4230 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4231 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4232 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4233 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4234 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4235 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4236 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4237 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4238 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4239 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4240 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4241 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4242 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4243 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4244 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4245 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4246 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4247 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4248 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4249 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4250 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4251 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4252 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4253 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4254 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4255 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4256 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4257 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4258 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4259 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4260 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4261 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4262 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4263 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4264 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4265 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4266 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4267 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4268 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4269 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4270 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4271 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4272 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4273 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4274 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4275 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4276 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4277 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4278 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4279 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4280 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4281 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4282 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4283 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4284 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4285 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4286 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4287 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4288 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4289 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4290 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4291 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4292 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4293 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4294 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4295 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4296 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4297 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4298 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4299 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4300 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4301 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4302 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4303 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4304 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4305 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4306 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4307 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4308 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4309 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4310 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4311 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4312 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4313 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4314 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4315 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4316 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4317 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4318 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4319 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4320 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4321 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4322 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4323 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4324 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4325 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4326 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4327 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4328 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4329 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4330 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4331 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4332 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4333 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4334 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4335 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4336 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4337 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4338 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4339 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4340 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4341 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4342 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4343 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4344 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4345 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4346 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4347 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4348 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4349 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4350 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4351 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4352 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4353 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4354 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4355 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4356 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4357 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4358 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4359 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4360 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4361 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4362 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4363 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4364 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4365 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4366 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4367 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4368 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4369 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4370 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4371 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4372 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4373 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4374 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4375 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4376 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4377 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4378 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4379 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4380 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4381 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4382 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4383 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4384 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4385 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4386 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4387 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4388 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4389 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4390 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4391 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4392 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4393 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4394 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4395 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4396 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4397 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4398 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4399 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4400 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4401 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4402 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4403 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4404 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4405 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4406 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4407 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4408 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4409 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4410 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4411 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4412 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4413 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4414 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4415 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4416 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4417 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4418 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4419 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4420 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4421 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4422 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4423 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4424 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4425 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4426 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4427 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4428 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4429 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4430 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4431 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4432 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4433 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4434 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4435 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4436 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4437 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4438 self.assertEqual(1, len(b)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4439 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4440 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4441 self.assertEqual(1, len(c)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4442 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4443 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4444 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4445 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4446 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4447 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4448 # Upload using the REST API |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4449 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4450 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4451 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4452 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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4453 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4454 |
| 4455 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4456 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4457 | |
|
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4458 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4459 self.assertEqual('RestApi', m['Origin']) |
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4460 self.assertEqual('', m['RemoteAET']) |
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4461 self.assertNotEqual('', m['RemoteIP']) |
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4462 self.assertFalse('CalledAET' in m) |
| 315 | 4463 self.assertTrue('HttpUsername' in m) |
| 4464 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
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4465 |
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4466 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4467 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4468 self.assertEqual('1', m['IndexInSeries']) |
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4469 self.assertTrue('ReceptionDate' in m) |
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4470 |
|
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4471 DoDelete(_REMOTE, '/instances/%s' % i) |
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4472 |
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4473 # Upload using the DICOM protocol |
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4474 subprocess.check_call([ FindExecutable('storescu'), |
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4475 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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4476 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
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4477 '-xw' ]) # Propose JPEG2000 |
|
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4478 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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4479 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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4480 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4481 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
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4482 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
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4483 |
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4484 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4485 self.assertEqual('DicomProtocol', m['Origin']) |
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4486 self.assertEqual('STORESCU', m['RemoteAET']) |
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4487 self.assertNotEqual('', m['RemoteIP']) |
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4488 self.assertEqual('ANY-SCP', m['CalledAET']) |
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|
4489 self.assertFalse('HttpUsername' in m) |
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4490 |
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|
4491 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4492 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4493 self.assertEqual('1', m['IndexInSeries']) |
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|
4494 self.assertTrue('ReceptionDate' in m) |
| 147 | 4495 |
| 4496 | |
| 4497 def test_lua_deadlock(self): | |
| 4498 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4499 # is with the lua script I'm using for conversion of images to | |
| 4500 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4501 # instance appears to be stored and then everything just | |
| 4502 # halts, ie Orthanc wont respond to anything after that." | |
| 4503 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4504 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4505 |
| 4506 subprocess.check_call([ FindExecutable('storescu'), | |
| 4507 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4508 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4509 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4510 ]) | |
| 4511 | |
| 4512 instances = DoGet(_REMOTE, '/instances') | |
| 4513 self.assertEqual(2, len(instances)) | |
| 4514 | |
| 4515 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4516 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4517 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4518 self.assertEqual(t1, t2); |
|
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4519 |
|
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|
4520 |
|
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|
4521 def test_find_group_length(self): |
|
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4522 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
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4523 # one of the Generic Group Length tags (*, 0x0000) |
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4524 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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|
4525 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
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4526 self.assertFalse('UnableToProcess' in result) |
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|
4527 self.assertFalse('E:' in result) |
|
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4528 |
|
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|
4529 |
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|
4530 def test_split(self): |
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4531 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
4532 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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|
4533 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4534 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
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4535 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4536 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
4537 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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4538 |
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|
4539 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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|
4540 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4541 |
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|
4542 info = DoGet(_REMOTE, '/studies/%s' % study) |
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|
4543 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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4544 |
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|
4545 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
4546 (_REMOTE, '/studies/%s/split' % study, { |
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|
4547 'Series' : [ t2 ], |
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4548 'Replace' : { 'PatientName' : 'Hello' }, |
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|
4549 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4550 'KeepSource' : False, |
| 4551 'Asynchronous' : True | |
|
179
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|
4552 })) |
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|
4553 |
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|
4554 self.assertNotEqual(None, job) |
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4555 |
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|
4556 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4557 self.assertEqual(2, len(studies)) |
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4558 |
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changeset
|
4559 series = set(DoGet(_REMOTE, '/series')) |
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|
4560 self.assertEqual(2, len(series)) |
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|
4561 self.assertTrue(t1 in series) |
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4562 |
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|
4563 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4564 self.assertTrue(study in studies) |
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|
4565 self.assertTrue(study2 in studies) |
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4566 |
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|
4567 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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4568 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4569 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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4570 |
|
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|
4571 sopInstanceUids = set() |
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|
4572 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4573 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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4574 |
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|
4575 self.assertTrue(knee1Sop in sopInstanceUids) |
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|
4576 |
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|
4577 # Fails if Orthanc <= 1.5.7 |
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4578 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4579 |
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|
4580 # One original instance is kept, another one is added because of the split |
|
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4581 self.assertEqual(2, len(sopInstanceUids)) |
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4582 |
|
179
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4583 |
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|
4584 def test_merge(self): |
|
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4585 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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4586 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
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4587 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4588 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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4589 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4590 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4591 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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4592 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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4593 |
|
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4594 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4595 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4596 |
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|
4597 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
4598 (_REMOTE, '/studies/%s/merge' % knee, { |
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|
4599 'Resources' : [ brainix ], |
| 181 | 4600 'KeepSource' : True, |
| 4601 'Synchronous' : False | |
|
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4602 })) |
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|
4603 |
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|
4604 self.assertNotEqual(None, job) |
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4605 |
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4606 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4607 self.assertEqual(2, len(studies)) |
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4608 self.assertTrue(knee in studies) |
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|
4609 self.assertTrue(brainix in studies) |
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4610 |
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|
4611 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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4612 self.assertTrue(t1 in series) |
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4613 series.remove(t1) |
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4614 self.assertEqual(1, len(series)) |
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4615 |
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|
4616 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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4617 self.assertEqual(1, len(instances)) |
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4618 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4619 |
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4620 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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4621 self.assertEqual(1, len(instances)) |
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4622 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4623 |
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4624 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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4625 self.assertEqual(1, len(instances)) |
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4626 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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4627 |
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4628 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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4629 |
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4630 for key in tags['PatientMainDicomTags']: |
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|
4631 self.assertEqual(a[key], merged[key]) |
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4632 if (key in b and key != 'PatientSex'): |
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4633 self.assertNotEqual(a[key], b[key]) |
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4634 |
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|
4635 for key in tags['MainDicomTags']: |
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|
4636 # Not in the patient/study module |
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4637 if (not key in [ 'InstitutionName', |
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4638 'RequestingPhysician', |
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4639 'RequestedProcedureDescription', ]): |
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4640 self.assertEqual(a[key], merged[key]) |
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4641 if (key in b): |
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4642 self.assertNotEqual(a[key], b[key]) |
|
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4643 |
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4644 sopInstanceUids = set() |
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|
4645 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4646 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4647 |
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4648 self.assertTrue(kneeSop in sopInstanceUids) |
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|
4649 self.assertTrue(brainixSop in sopInstanceUids) |
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4650 |
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|
4651 # Fails if Orthanc <= 1.5.7 |
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4652 # The 2 original instances are kept, another one is added because of the merge |
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|
4653 self.assertEqual(3, len(sopInstanceUids)) |
|
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4654 |
| 187 | 4655 |
| 4656 def test_async_archive(self): | |
| 4657 # Testing the asynchronous generation of archives/medias (new | |
| 4658 # in Orthanc 1.4.3) | |
| 4659 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4660 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4661 | |
| 4662 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4663 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4664 | |
| 4665 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 508 | 4666 (_REMOTE, '/series/%s/archive' % kneeT1, { |
| 187 | 4667 'Synchronous' : False |
| 4668 })) | |
| 4669 | |
| 4670 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4671 self.assertEqual(1, len(z.namelist())) | |
| 4672 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4673 | |
|
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|
4674 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4675 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4676 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4677 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4678 |
| 187 | 4679 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 508 | 4680 (_REMOTE, '/series/%s/media' % kneeT1, { |
| 187 | 4681 'Synchronous' : False |
| 4682 })) | |
| 4683 | |
| 4684 # The archive from the first job has been replaced by the | |
| 4685 # archive from second job (as MediaArchiveSize == 1) | |
| 4686 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4687 | |
| 4688 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4689 self.assertEqual(2, len(z.namelist())) | |
| 4690 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4691 | |
|
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|
4692 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4693 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4694 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
4695 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4696 |
| 187 | 4697 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4698 (_REMOTE, '/tools/create-archive', { | |
| 4699 'Synchronous' : False, | |
| 4700 'Resources' : [ kneeT1, kneeT2 ], | |
| 4701 })) | |
| 4702 | |
| 4703 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4704 self.assertEqual(2, len(z.namelist())) | |
| 4705 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4706 | |
|
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|
4707 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4708 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4709 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4710 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4711 |
| 187 | 4712 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4713 (_REMOTE, '/tools/create-media', { | |
| 4714 'Synchronous' : False, | |
| 4715 'Resources' : [ kneeT1, kneeT2 ], | |
| 4716 })) | |
| 4717 | |
| 4718 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4719 self.assertEqual(3, len(z.namelist())) | |
| 4720 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
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4721 |
|
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|
4722 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4723 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4724 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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4725 |
| 187 | 4726 |
|
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|
4727 def test_queries_hierarchy(self): |
|
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|
4728 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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diff
changeset
|
4729 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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changeset
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4730 |
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diff
changeset
|
4731 tags = { |
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changeset
|
4732 'NumberOfPatientRelatedInstances' : '', |
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diff
changeset
|
4733 'NumberOfPatientRelatedSeries' : '', |
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diff
changeset
|
4734 'NumberOfPatientRelatedStudies' : '', |
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diff
changeset
|
4735 'NumberOfStudyRelatedInstances' : '', |
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diff
changeset
|
4736 'NumberOfStudyRelatedSeries' : '', |
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diff
changeset
|
4737 'NumberOfSeriesRelatedInstances' : '', |
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changeset
|
4738 } |
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changeset
|
4739 |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4740 tags2 = copy.copy(tags) |
|
11719f19bd62
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diff
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|
4741 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
11719f19bd62
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diff
changeset
|
4742 |
|
188
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diff
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|
4743 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
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diff
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|
4744 'Level' : 'Patient', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4745 'Query' : tags2 |
|
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|
4746 }) ['ID'] |
|
7d585263808b
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diff
changeset
|
4747 |
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7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4748 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
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diff
changeset
|
4749 'Level' : 'Study', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4750 'Query' : tags2 |
|
188
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diff
changeset
|
4751 }) ['ID'] |
|
7d585263808b
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diff
changeset
|
4752 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4753 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
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diff
changeset
|
4754 'Level' : 'Series', |
|
189
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test_dicom_disk_size
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diff
changeset
|
4755 'Query' : tags2 |
|
188
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diff
changeset
|
4756 }) ['ID'] |
|
7d585263808b
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diff
changeset
|
4757 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4758 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4759 'Level' : 'Instance', |
|
189
11719f19bd62
test_dicom_disk_size
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188
diff
changeset
|
4760 'Query' : tags2 |
|
188
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diff
changeset
|
4761 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4762 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4763 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4764 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4765 self.assertEqual('887', p[0]['PatientID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4766 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4767 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
|
7d585263808b
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diff
changeset
|
4768 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4769 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4770 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
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diff
changeset
|
4771 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4772 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4773 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4774 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4775 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4776 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4777 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4778 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4779 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4780 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4781 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4782 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4783 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4784 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4785 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4786 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4787 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4788 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4789 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4790 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4791 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4792 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4793 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4794 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4795 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4796 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4797 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4798 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4799 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4800 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4801 |
|
188
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4802 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4803 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4804 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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diff
changeset
|
4805 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4806 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4807 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
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diff
changeset
|
4808 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4809 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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diff
changeset
|
4810 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
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diff
changeset
|
4811 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4812 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
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diff
changeset
|
4813 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4814 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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diff
changeset
|
4815 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4816 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4817 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
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diff
changeset
|
4818 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4819 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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diff
changeset
|
4820 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
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diff
changeset
|
4821 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4822 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
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diff
changeset
|
4823 { 'Query' : tags }) ['ID'] |
|
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diff
changeset
|
4824 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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diff
changeset
|
4825 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4826 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4827 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4828 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4829 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
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parents:
188
diff
changeset
|
4830 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4831 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4832 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4833 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4834 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4835 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4836 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4837 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4838 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4839 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4840 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4841 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4842 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4843 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4844 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4845 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4846 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4847 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4848 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4849 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4850 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4851 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4852 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4853 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4854 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4855 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4856 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4857 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4858 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4859 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4860 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4861 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4862 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4863 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4864 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4865 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4866 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4867 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4868 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4869 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4870 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4871 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4872 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4873 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4874 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4875 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4876 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4877 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4878 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4879 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4880 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4881 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4882 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4883 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4884 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4885 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4886 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4887 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4888 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4889 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4890 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4891 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4892 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4893 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4894 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4895 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4896 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4897 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4898 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4899 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4900 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4901 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4902 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4903 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4904 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4905 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4906 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4907 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4908 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4909 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4910 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4911 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4912 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4913 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4914 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4915 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4916 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4917 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4918 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4919 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4920 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4921 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4922 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4923 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4924 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4925 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4926 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4927 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
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parents:
393
diff
changeset
|
4928 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
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parents:
393
diff
changeset
|
4929 }) |
|
e87d54a8a204
compatibility with 1.9.1
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parents:
393
diff
changeset
|
4930 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4931 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4932 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
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parents:
393
diff
changeset
|
4933 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4934 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4935 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4936 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4937 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
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parents:
384
diff
changeset
|
4938 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
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parents:
384
diff
changeset
|
4939 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4940 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4941 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4942 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4943 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4944 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4945 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4946 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4947 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4948 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4949 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4950 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4951 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4952 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4953 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4954 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4955 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4956 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4957 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
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parents:
195
diff
changeset
|
4958 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4959 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4960 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4961 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
| 508 | 4962 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
| 4963 | |
| 4964 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4965 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4966 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4967 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4968 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4969 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4970 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4971 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4972 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4973 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4974 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4975 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4976 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4977 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4978 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4979 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4980 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4981 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4982 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4983 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4984 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
4985 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4986 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4987 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4988 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4989 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4990 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4991 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4992 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4993 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4994 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4995 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4996 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4997 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4998 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4999 |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5000 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
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parents:
207
diff
changeset
|
5001 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5002 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5003 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5004 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5005 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5006 |
|
2c50c8f340c2
test_rest_modalities_in_study
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208
diff
changeset
|
5007 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5008 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5009 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
changeset
|
5010 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5011 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5012 |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5013 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5014 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5015 self.assertEqual(0, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5016 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5017 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5018 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5019 self.assertEqual(1, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5020 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
5021 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
5022 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
5023 self.assertEqual(1, len(a)) |
| 211 | 5024 |
| 5025 | |
| 5026 def test_series_status(self): | |
| 5027 def HasCompletedInChanges(): | |
| 5028 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 5029 if c['ChangeType'] == 'CompletedSeries': | |
| 5030 return True; | |
| 5031 | |
| 5032 return False | |
| 5033 | |
| 5034 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 5035 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 5036 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5037 self.assertFalse(HasCompletedInChanges()) | |
| 5038 | |
| 5039 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 5040 | |
| 5041 for i in range(3): | |
| 5042 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 5043 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5044 self.assertFalse(HasCompletedInChanges()) | |
| 5045 | |
| 5046 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 5047 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5048 self.assertTrue(HasCompletedInChanges()) | |
| 5049 | |
| 5050 DoDelete(_REMOTE, '/changes') | |
| 5051 self.assertFalse(HasCompletedInChanges()) | |
| 5052 | |
| 5053 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 5054 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5055 self.assertFalse(HasCompletedInChanges()) | |
| 5056 | |
| 215 | 5057 |
| 5058 def test_dicomweb(self): | |
| 5059 def Compare(dicom, reference): | |
| 5060 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5061 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 5062 headers = { 'Accept' : 'application/dicom+json' }) | |
| 5063 with open(GetDatabasePath(reference), 'rb') as c: | |
| 5064 d = json.load(c) | |
| 220 | 5065 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 5066 |
| 5067 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 5068 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 5069 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 5070 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 5071 |
| 5072 | |
| 5073 def test_issue_95_encodings(self): | |
| 319 | 5074 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 5075 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 5076 | |
| 5077 # Very useful tool: "file2" from package "file-kanji" | |
| 5078 | |
| 5079 def GetPatientName(dicom): | |
| 5080 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5081 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 5082 return j['PatientName'] | |
| 5083 | |
| 5084 def ComparePatientName(name, dicom): | |
| 5085 self.assertEqual(name, GetPatientName(dicom)) | |
| 5086 | |
| 5087 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5088 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 5089 | |
| 5090 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 5091 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 5092 | |
| 5093 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 5094 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 5095 | |
| 5096 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 5097 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 5098 | |
| 5099 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 5100 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 5101 | |
| 5102 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5103 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 5104 | |
| 5105 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 5106 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 5107 | |
| 5108 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 5109 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 5110 | |
| 5111 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 5112 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 5113 # Linux console into Emacs automatically reverse the string | |
| 5114 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 5115 | |
| 5116 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 5117 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 5118 # characters by default, but copy/paste works with Emacs | |
| 5119 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 5120 | |
| 5121 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 5122 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 5123 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 5124 # remainer. Orthanc only takes into consideration the first | |
| 5125 # codepage: This is a limitation. | |
| 5126 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 5127 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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5128 |
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5129 |
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5130 def test_findscu_missing_tags(self): |
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5131 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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5132 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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5133 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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5134 |
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5135 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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5136 |
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5137 # We have 2 instances... |
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5138 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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5139 self.assertEqual(2, len(patientNames)) |
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5140 self.assertEqual('KNIX', patientNames[0]) |
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5141 self.assertEqual('KNIX', patientNames[1]) |
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5142 |
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5143 # ...but only 1 value for the "Rows" tag |
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5144 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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5145 self.assertEqual(1, len(rows)) |
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5146 self.assertEqual('512', rows[0]) |
|
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5147 |
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5148 |
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5149 |
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5150 def test_bitbucket_issue_131(self): |
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5151 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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5152 # StudyInstanceUID in it's database." |
| 319 | 5153 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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5154 |
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5155 # Insert 2 instances, with the same StudyInstanceUID, but with |
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5156 # different patient IDs. Orthanc will create 2 distincts |
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5157 # patients, and the hierarchy of resources above the two |
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5158 # instances will be fully disjoint. |
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5159 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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5160 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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5161 |
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5162 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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5163 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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5164 |
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5165 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5166 'Level' : 'Study', |
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5167 'Query' : {"PatientID": "A" }})['ID'] |
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5168 |
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5169 # 1 study is matched |
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5170 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5171 |
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5172 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5173 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5174 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5175 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5176 |
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5177 # The two studies are matched, as we made the request at the |
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5178 # Study level, thus the shared StudyInstanceUID is used as the key |
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5179 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5180 |
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|
5181 |
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5182 # Match the 2 studies |
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5183 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5184 'Level' : 'Study', |
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5185 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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5186 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5187 DropOrthanc(_LOCAL) |
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5188 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5189 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5190 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5191 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5192 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5193 |
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5194 |
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5195 # Same test, at the patient level => only 1 instance is transfered |
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5196 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5197 'Level' : 'Patient', |
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5198 'Query' : {"PatientID": "A" }})['ID'] |
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5199 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5200 DropOrthanc(_LOCAL) |
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5201 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5202 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5203 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5204 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5205 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5206 |
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5207 |
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5208 # Same test, at the series level => only 1 instance is transfered |
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5209 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5210 'Level' : 'Series', |
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5211 'Query' : {"PatientID": "A" }})['ID'] |
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5212 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5213 DropOrthanc(_LOCAL) |
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5214 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5215 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5216 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5217 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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|
5218 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5219 |
|
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231
diff
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|
5220 |
|
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diff
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|
5221 def test_bitbucket_issue_136(self): |
|
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|
5222 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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diff
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|
5223 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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diff
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|
5224 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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diff
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|
5225 self.assertEqual(1, len(patientNames)) |
|
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diff
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|
5226 self.assertEqual('John Doe', patientNames[0]) |
|
234
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diff
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5227 |
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test_anonymize_relationships_4
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diff
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5228 |
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test_anonymize_relationships_4
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diff
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|
5229 def test_anonymize_relationships_4(self): |
|
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test_anonymize_relationships_4
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diff
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|
5230 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
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test_anonymize_relationships_4
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diff
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|
5231 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
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diff
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|
5232 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
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diff
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|
5233 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
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diff
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5234 |
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93cd4fdd4a67
test_anonymize_relationships_4
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diff
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|
5235 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
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diff
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|
5236 'application/json')['ID'] |
|
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diff
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|
5237 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
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5238 self.assertEqual(2, len(series)) |
|
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diff
changeset
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5239 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5240 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
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test_anonymize_relationships_4
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diff
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5241 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
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test_anonymize_relationships_4
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diff
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|
5242 self.assertEqual(1, len(cr)) |
|
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|
5243 self.assertEqual(1, len(pr)) |
|
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|
5244 self.assertEqual(1, len(cr[0]['Instances'])) |
|
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diff
changeset
|
5245 self.assertEqual(1, len(pr[0]['Instances'])) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5246 |
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93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5247 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
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test_anonymize_relationships_4
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diff
changeset
|
5248 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5249 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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diff
changeset
|
5250 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
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test_anonymize_relationships_4
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233
diff
changeset
|
5251 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
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test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5252 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
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test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5253 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
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test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5254 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5255 # This fails on Orthanc <= 1.5.6 |
|
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parents:
233
diff
changeset
|
5256 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
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test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5257 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5258 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5259 |
|
255
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254
diff
changeset
|
5260 def test_anonymize_relationships_5(self): |
|
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parents:
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diff
changeset
|
5261 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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parents:
254
diff
changeset
|
5262 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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parents:
254
diff
changeset
|
5263 oStudyId = ct1['ParentStudy'] |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5264 oCtInstanceId = ct1['ID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5265 oRtInstanceId = rt1['ID'] |
|
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amazy
parents:
254
diff
changeset
|
5266 |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5267 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
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parents:
254
diff
changeset
|
5268 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5269 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5270 # first validate the relationships in the source data |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5271 oStudyUID = oCtTags['StudyInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5272 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5273 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5274 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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amazy
parents:
254
diff
changeset
|
5275 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5276 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5277 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5278 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5279 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5280 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5281 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5282 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5283 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5284 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5285 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5286 ### anonymize |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5287 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5288 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
|
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amazy
parents:
254
diff
changeset
|
5289 'application/json')['ID'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5290 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5291 ### validate |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5292 |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5293 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
|
02c3d91b155c
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amazy
parents:
254
diff
changeset
|
5294 self.assertEqual(2, len(aSeries)) |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5295 |
|
02c3d91b155c
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parents:
254
diff
changeset
|
5296 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
|
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parents:
254
diff
changeset
|
5297 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
|
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parents:
254
diff
changeset
|
5298 aCtInstanceId = aCt[0]['Instances'][0] |
|
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parents:
254
diff
changeset
|
5299 aRtInstanceId = aRt[0]['Instances'][0] |
|
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parents:
254
diff
changeset
|
5300 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
|
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diff
changeset
|
5301 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
|
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parents:
254
diff
changeset
|
5302 |
|
02c3d91b155c
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254
diff
changeset
|
5303 # now validate the relationships in the anonymized data |
|
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diff
changeset
|
5304 aStudyUID = aCtTags['StudyInstanceUID'] |
|
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254
diff
changeset
|
5305 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
|
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254
diff
changeset
|
5306 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
|
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254
diff
changeset
|
5307 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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diff
changeset
|
5308 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5309 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5310 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
|
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254
diff
changeset
|
5311 |
|
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diff
changeset
|
5312 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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diff
changeset
|
5313 # make sure all UIDs have been updated |
|
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diff
changeset
|
5314 self.assertNotEqual(oStudyUID, aStudyUID) |
|
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diff
changeset
|
5315 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
|
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diff
changeset
|
5316 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
|
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diff
changeset
|
5317 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
|
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diff
changeset
|
5318 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
|
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diff
changeset
|
5319 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
|
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254
diff
changeset
|
5320 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
|
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parents:
254
diff
changeset
|
5321 |
|
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parents:
254
diff
changeset
|
5322 # validate the relationships |
|
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parents:
254
diff
changeset
|
5323 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
|
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parents:
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diff
changeset
|
5324 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5325 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5326 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
255
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|
5327 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5328 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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|
5329 |
| 256 | 5330 def test_anonymize_relationships_5b(self): |
| 5331 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5332 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5333 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5334 oStudyId = ct1['ParentStudy'] | |
| 5335 oCtInstanceId = ct1['ID'] | |
| 5336 oRtInstanceId = rt1['ID'] | |
| 5337 | |
| 5338 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5339 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5340 | |
| 5341 ### anonymize while forcing the StudyInstanceUID | |
| 5342 | |
| 5343 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5344 'application/json')['ID'] | |
| 5345 | |
| 5346 ### validate | |
| 5347 | |
| 5348 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5349 self.assertEqual(2, len(aSeries)) | |
| 5350 | |
| 5351 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5352 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5353 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5354 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5355 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5356 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5357 | |
| 5358 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5359 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5360 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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|
5361 |
|
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|
5362 |
|
235
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|
5363 def test_bitbucket_issue_140(self): |
| 266 | 5364 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5365 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5366 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
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diff
changeset
|
5367 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
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diff
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|
5368 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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|
5369 |
|
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test_bitbucket_issue_140
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diff
changeset
|
5370 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5371 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5372 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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|
5373 }, 'application/json') ['ID'] |
|
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diff
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|
5374 |
|
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diff
changeset
|
5375 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
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|
5376 self.assertEqual(1, len(instances)) |
|
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|
5377 |
|
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test_bitbucket_issue_140
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diff
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|
5378 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
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|
5379 t = tags['4321,1012'] |
|
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|
5380 self.assertEqual('String', t['Type']) |
|
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|
5381 self.assertEqual('RadioButton3', t['Name']) |
|
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|
5382 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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|
5383 self.assertEqual('jklmopq', t['Value']) |
|
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|
5384 |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5385 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5386 t = tags['4321,1012'] |
| 327 | 5387 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
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diff
changeset
|
5388 self.assertEqual('RadioButton3', t['Name']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5389 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5390 self.assertEqual('aaabbbccc', t['Value']) |
|
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diff
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|
5391 |
|
2de1aec255ae
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235
diff
changeset
|
5392 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5393 def test_find_normalize(self): |
|
2de1aec255ae
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diff
changeset
|
5394 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
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diff
changeset
|
5395 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5396 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
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|
5397 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5398 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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diff
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|
5399 'Level' : 'Instance', |
|
2de1aec255ae
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diff
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|
5400 'Query' : { 'Rows' : '42' } |
|
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diff
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|
5401 }) ['ID'] |
|
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test_find_normalize
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diff
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|
5402 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5403 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
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diff
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|
5404 self.assertEqual(1, len(b)) |
|
2de1aec255ae
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diff
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|
5405 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
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235
diff
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|
5406 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5407 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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diff
changeset
|
5408 'Level' : 'Instance', |
|
2de1aec255ae
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diff
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|
5409 'Query' : { 'Rows' : '42' }, |
|
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|
5410 'Normalize' : False |
|
2de1aec255ae
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|
5411 }) ['ID'] |
|
2de1aec255ae
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diff
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|
5412 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5413 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
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diff
changeset
|
5414 self.assertEqual(0, len(b)) |
|
2de1aec255ae
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235
diff
changeset
|
5415 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5416 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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diff
changeset
|
5417 'Level' : 'Instance', |
|
2de1aec255ae
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diff
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|
5418 'Query' : { 'Rows' : '512' }, |
|
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|
5419 'Normalize' : False |
|
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diff
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|
5420 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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235
diff
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|
5421 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5422 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
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diff
changeset
|
5423 self.assertEqual(1, len(b)) |
|
2de1aec255ae
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diff
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|
5424 self.assertTrue('Rows' in b[0]) |
|
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diff
changeset
|
5425 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5426 |
| 5427 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5428 'Level' : 'Instance', | |
| 5429 'Query' : { 'Rows' : '' }, | |
| 5430 'Normalize' : False | |
| 5431 }) ['ID'] | |
| 5432 | |
| 5433 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5434 self.assertEqual(1, len(b)) | |
| 5435 self.assertTrue('Rows' in b[0]) | |
| 5436 self.assertEqual('512', b[0]['Rows']) | |
| 5437 | |
| 5438 self.assertRaises(Exception, lambda: DoPost( | |
| 5439 _REMOTE, '/modalities/self/query', { | |
| 5440 'Level' : 'Instance', | |
| 5441 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5442 'Normalize' : False | |
| 5443 })) | |
|
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|
5444 |
|
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|
5445 |
|
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test_bitbucket_issue_141
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diff
changeset
|
5446 def test_bitbucket_issue_141(self): |
| 319 | 5447 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
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|
5448 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
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|
5449 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
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|
5450 |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5451 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
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diff
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|
5452 pdf = f.read() |
|
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|
5453 |
|
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test_bitbucket_issue_141
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diff
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|
5454 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
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|
5455 'Parent' : study, |
|
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|
5456 'Tags' : {}, |
|
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|
5457 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
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|
5458 }) ['ID'] |
|
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|
5459 |
|
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|
5460 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
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|
5461 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
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|
5462 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
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|
5463 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
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|
5464 |
|
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diff
changeset
|
5465 |
|
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test_modifying_missing_patientid
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diff
changeset
|
5466 def test_modifying_missing_patientid(self): |
|
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changeset
|
5467 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
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changeset
|
5468 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
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changeset
|
5469 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5470 |
| 5471 | |
| 5472 def test_log_level(self): | |
| 319 | 5473 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5474 original = DoGet(_REMOTE, '/tools/log-level') |
| 5475 | |
| 5476 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5477 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5478 DoGet(_REMOTE, '/system') | |
| 5479 | |
| 5480 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5481 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5482 DoGet(_REMOTE, '/system') | |
| 5483 | |
| 5484 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5485 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5486 DoGet(_REMOTE, '/system') | |
| 5487 | |
| 5488 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5489 | |
| 5490 # Switch back to the original log level | |
| 5491 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
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|
5492 |
|
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|
5493 |
|
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|
5494 def test_upload_compressed(self): |
| 265 | 5495 # New in Orthanc 1.6.0 |
|
264
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|
5496 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
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diff
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|
5497 d = f.read() |
|
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diff
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|
5498 |
|
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diff
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|
5499 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
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diff
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|
5500 |
|
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diff
changeset
|
5501 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
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diff
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|
5502 headers = { 'Content-Encoding' : 'nope' })) |
|
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263
diff
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|
5503 |
|
445f498bc1d4
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diff
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|
5504 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
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diff
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|
5505 headers = { 'Content-Encoding' : 'gzip' }) |
|
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diff
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|
5506 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5507 |
| 5508 | |
|
263
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diff
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|
5509 def test_study_series_find_inconsistency(self): |
|
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diff
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|
5510 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
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diff
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|
5511 |
|
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diff
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|
5512 def CountAnswers(query): |
|
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diff
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|
5513 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
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diff
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|
5514 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
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diff
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|
5515 |
|
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diff
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|
5516 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
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parents:
262
diff
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|
5517 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
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262
diff
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|
5518 # the "main DICOM tags" of Orthanc. |
|
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262
diff
changeset
|
5519 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5520 |
|
a2719263fd04
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parents:
262
diff
changeset
|
5521 |
|
a2719263fd04
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parents:
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diff
changeset
|
5522 self.assertEqual(1, CountAnswers({ |
|
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parents:
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diff
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|
5523 'Level' : 'Study', |
|
a2719263fd04
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parents:
262
diff
changeset
|
5524 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5525 |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5526 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
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parents:
262
diff
changeset
|
5527 'Level' : 'Series', |
|
a2719263fd04
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parents:
262
diff
changeset
|
5528 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5529 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5530 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5531 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5532 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
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parents:
262
diff
changeset
|
5533 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
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parents:
262
diff
changeset
|
5534 ## |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5535 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5536 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5537 # is wiped out by the normalization |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5538 self.assertEqual(0, CountAnswers({ |
|
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test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5539 'Level' : 'Study', |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5540 'Query' : { |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5541 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5542 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5543 'Normalize' : False |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5544 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5545 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5546 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5547 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5548 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5549 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5550 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5551 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5552 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5553 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5554 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5555 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5556 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5557 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5558 'Normalize' : True |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5559 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5560 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5561 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5562 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5563 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5564 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5565 'Normalize' : True |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5566 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5567 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5568 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5569 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5570 # normalization has no effect |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5571 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5572 # "Universal matching" will match all entities, including |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5573 # those with the missing tag |
|
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parents:
262
diff
changeset
|
5574 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
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diff
changeset
|
5575 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5576 'Level' : 'Series', |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5577 'Query' : { |
|
a2719263fd04
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262
diff
changeset
|
5578 'SeriesDescription' : '' # Universal matching |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5579 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5580 'Normalize' : normalize, |
|
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262
diff
changeset
|
5581 })) |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5582 # "Universal matching" will match all entities, including |
|
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diff
changeset
|
5583 # those with the missing tag |
|
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diff
changeset
|
5584 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
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diff
changeset
|
5585 self.assertEqual(1, CountAnswers({ |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5586 'Level' : 'Series', |
|
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262
diff
changeset
|
5587 'Query' : { |
|
a2719263fd04
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diff
changeset
|
5588 'SeriesDescription' : '*' # Wildcard matching |
|
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diff
changeset
|
5589 }, |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5590 'Normalize' : normalize, |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5591 })) |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5592 self.assertEqual(1, CountAnswers({ |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5593 'Level' : 'Series', |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5594 'Query' : { |
|
a2719263fd04
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diff
changeset
|
5595 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
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test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5596 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
5597 'Normalize' : normalize, |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5598 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5599 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5600 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5601 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5602 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5603 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5604 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5605 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5606 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5607 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5608 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5609 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5610 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5611 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5612 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5613 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5614 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5615 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5616 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5617 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5618 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5619 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5620 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5621 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5622 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5623 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5624 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5625 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5626 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5627 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5628 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5629 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5630 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5631 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5632 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5633 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5634 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5635 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5636 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5637 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5638 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5639 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5640 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5641 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5642 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5643 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5644 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5645 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5646 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5647 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5648 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5649 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5650 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5651 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5652 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5653 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5654 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5655 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5656 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5657 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5658 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5659 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5660 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5661 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5662 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5663 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5664 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5665 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5666 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5667 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5668 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5669 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5670 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5671 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5672 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5673 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5674 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5675 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5676 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5677 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5678 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5679 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5680 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5681 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5682 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5683 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5684 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5685 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5686 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5687 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5688 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5689 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5690 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5691 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5692 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5693 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5694 for level in [ 'Study', 'Series' ] : |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5695 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5696 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5697 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5698 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5699 'StudyInstanceUID' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5700 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5701 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5702 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5703 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5704 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5705 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5706 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5707 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5708 'Normalize' : normalize, |
|
a2719263fd04
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5709 })) |
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5710 self.assertEqual(1, CountAnswers({ |
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5711 'Level' : level, |
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5712 'Query' : { |
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5713 'StudyInstanceUID' : '4.5.6' # This is the actual value |
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5714 }, |
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5715 'Normalize' : normalize, |
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5716 })) |
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5717 |
| 269 | 5718 # Wildcard matching is not allowed for this VR |
|
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5719 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5720 self.assertRaises(Exception, lambda: CountAnswers({ |
|
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5721 'Level' : level, |
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5722 'Query' : { |
| 269 | 5723 'StudyInstanceUID' : '*' |
|
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5724 }, |
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5725 'Normalize' : normalize, |
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5726 })) |
| 265 | 5727 |
| 5728 | |
| 5729 def test_rendered(self): | |
| 5730 # New in Orthanc 1.6.0 | |
| 5731 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5732 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5733 self.assertEqual("RGB", im.mode) | |
| 5734 self.assertEqual(41, im.size[0]) | |
| 5735 self.assertEqual(41, im.size[1]) | |
| 5736 | |
| 5737 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5738 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5739 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5740 | |
| 5741 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5742 self.assertEqual("RGB", im.mode) | |
| 5743 self.assertEqual(10, im.size[0]) | |
| 5744 self.assertEqual(10, im.size[1]) | |
| 5745 | |
| 5746 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5747 self.assertEqual("RGB", im.mode) | |
| 5748 self.assertEqual(10, im.size[0]) | |
| 5749 self.assertEqual(10, im.size[1]) | |
| 5750 | |
| 5751 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5752 self.assertEqual("RGB", im.mode) | |
| 5753 self.assertEqual(128, im.size[0]) | |
| 5754 self.assertEqual(128, im.size[1]) | |
| 5755 | |
| 5756 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5757 self.assertEqual("RGB", im.mode) | |
| 5758 self.assertEqual(10, im.size[0]) | |
| 5759 self.assertEqual(10, im.size[1]) | |
| 5760 | |
| 5761 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5762 self.assertEqual("RGB", im.mode) | |
| 5763 self.assertEqual(10, im.size[0]) | |
| 5764 self.assertEqual(10, im.size[1]) | |
| 5765 | |
| 5766 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5767 self.assertEqual("RGB", im.mode) | |
| 5768 self.assertEqual(5, im.size[0]) | |
| 5769 self.assertEqual(5, im.size[1]) | |
| 5770 | |
| 5771 | |
| 5772 # Grayscale image | |
| 5773 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5774 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5775 self.assertEqual("L", im.mode) | |
| 5776 self.assertEqual(288, im.size[0]) | |
| 5777 self.assertEqual(288, im.size[1]) | |
| 5778 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5779 | |
| 5780 # Those are the original windowing parameters that are written | |
| 5781 # inside the DICOM file | |
| 5782 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5783 self.assertEqual("L", im2.mode) | |
| 5784 self.assertEqual(288, im2.size[0]) | |
| 5785 self.assertEqual(288, im2.size[1]) | |
| 5786 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5787 | |
| 5788 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5789 self.assertEqual("L", im.mode) | |
| 5790 self.assertEqual(512, im.size[0]) | |
| 5791 self.assertEqual(512, im.size[1]) | |
| 5792 | |
| 5793 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5794 self.assertEqual("L", im.mode) | |
| 5795 self.assertEqual(10, im.size[0]) | |
| 5796 self.assertEqual(10, im.size[1]) | |
| 5797 | |
| 5798 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5799 self.assertEqual("L", im.mode) | |
| 5800 self.assertEqual(10, im.size[0]) | |
| 5801 self.assertEqual(10, im.size[1]) | |
| 5802 | |
| 5803 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5804 self.assertEqual("L", im.mode) | |
| 5805 self.assertEqual(1, im.size[0]) | |
| 5806 self.assertEqual(1, im.size[1]) | |
| 5807 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5808 | |
| 5809 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5810 self.assertEqual("L", im.mode) | |
| 5811 self.assertEqual(1, im.size[0]) | |
| 5812 self.assertEqual(1, im.size[1]) | |
| 5813 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5814 | |
| 5815 | |
| 5816 # Test monochrome 1 | |
| 5817 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5818 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5819 self.assertEqual("L", im.mode) | |
| 5820 self.assertEqual(2010, im.size[0]) | |
| 5821 self.assertEqual(2446, im.size[1]) | |
| 5822 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5823 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5824 self.assertEqual("L", im.mode) | |
| 5825 self.assertEqual(20, im.size[0]) | |
| 5826 self.assertEqual(24, im.size[1]) | |
| 5827 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5828 self.assertEqual("L", im.mode) | |
| 5829 self.assertEqual(20, im.size[0]) | |
| 5830 self.assertEqual(24, im.size[1]) | |
| 5831 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5832 self.assertEqual("L", im.mode) | |
| 5833 self.assertEqual(10, im.size[0]) | |
| 5834 self.assertEqual(12, im.size[1]) | |
| 5835 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5836 self.assertEqual("L", im.mode) | |
| 5837 self.assertEqual(20, im.size[0]) | |
| 5838 self.assertEqual(24, im.size[1]) | |
|
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5839 |
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5840 |
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5841 def test_bitbucket_issue_154(self): |
|
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5842 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5843 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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5844 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5845 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5846 |
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5847 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5848 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5849 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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5850 |
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5851 # C-FIND is working on list of UIDs |
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5852 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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5853 '-k', 'StudyInstanceUID=%s' % study, |
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5854 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5855 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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5856 self.assertEqual(2, len(series)) |
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5857 self.assertTrue(series1 in series) |
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5858 self.assertTrue(series2 in series) |
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5859 |
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5860 # Individual retrieval is working in Orthanc < 1.6.0 |
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5861 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5862 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5863 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5864 '-k', 'StudyInstanceUID=%s' % study, |
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5865 '-k', 'SeriesInstanceUID=%s' % series1, |
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5866 ]))) |
|
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5867 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5868 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5869 '-k', 'StudyInstanceUID=%s' % study, |
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5870 '-k', 'SeriesInstanceUID=%s' % series2, |
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5871 ]))) |
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5872 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5873 |
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5874 DropOrthanc(_LOCAL) |
|
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5875 |
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5876 # But list matching is working only in Orthanc >= 1.6.0 |
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5877 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5878 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5879 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5880 '-k', 'StudyInstanceUID=%s' % study, |
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5881 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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5882 ]))) |
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5883 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5884 |
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5885 |
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5886 def test_storage_commitment_api(self): |
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5887 # Storage commitment is available since Orthanc 1.6.0 |
|
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5888 |
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5889 def WaitTransaction(uid): |
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5890 while True: |
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5891 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5892 if s['Status'] != 'Pending': |
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5893 return s |
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5894 else: |
|
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5895 time.sleep(0.01) |
|
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5896 |
| 281 | 5897 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5898 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5899 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5900 |
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5901 # Against self |
| 281 | 5902 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5903 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5904 }) ['ID'] | |
|
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5905 self.assertTrue(transaction.startswith('2.25.')) |
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5906 |
|
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5907 result = WaitTransaction(transaction) |
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5908 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5909 self.assertEqual('Success', result['Status']) |
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5910 self.assertEqual(1, len(result['Success'])) |
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5911 self.assertEqual(0, len(result['Failures'])) |
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5912 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5913 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5914 |
| 281 | 5915 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5916 "DicomInstances" : [ | |
| 5917 { 'SOPClassUID' : sopClassUid, | |
| 5918 'SOPInstanceUID' : sopInstanceUid }, | |
| 5919 ], | |
| 5920 }) | |
| 5921 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5922 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5923 | |
| 5924 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5925 "Resources" : [ | |
| 5926 instance['ID'], | |
| 5927 instance['ParentSeries'], | |
| 5928 instance['ParentStudy'], | |
| 5929 instance['ParentPatient'], | |
| 5930 ] | |
| 5931 }) | |
|
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5932 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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5933 self.assertEqual(result, WaitTransaction(transaction)) |
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5934 |
|
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5935 |
| 281 | 5936 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5937 "DicomInstances" : [ | |
| 5938 [ 'nope', 'nope2' ], | |
| 5939 [ sopClassUid, sopInstanceUid ], | |
| 5940 ], | |
| 5941 }) ['ID'] | |
|
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5942 self.assertTrue(transaction.startswith('2.25.')) |
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5943 |
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5944 result = WaitTransaction(transaction) |
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5945 self.assertEqual('ORTHANC', result['RemoteAET']) |
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5946 self.assertEqual('Failure', result['Status']) |
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5947 self.assertEqual(1, len(result['Success'])) |
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5948 self.assertEqual(1, len(result['Failures'])) |
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5949 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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5950 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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5951 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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5952 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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5953 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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5954 |
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5955 # Cannot remove items from a failed storage commitment transaction |
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5956 self.assertRaises(Exception, lambda: |
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5957 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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5958 |
|
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5959 |
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5960 # Against Orthanc 0.8.6, that does not support storage commitment |
|
509
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5961 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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5962 self.assertRaises(Exception, lambda: |
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|
5963 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
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5964 "DicomInstances" : [ |
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5965 [ sopClassUid, sopInstanceUid ], |
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5966 ] |
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5967 })) |
|
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5968 |
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5969 |
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5970 |
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5971 def test_storage_commitment_store(self): |
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5972 # Storage commitment is available since Orthanc 1.6.0 |
|
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5973 |
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5974 def WaitTransaction(uid): |
|
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5975 while True: |
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5976 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5977 if s['Status'] != 'Pending': |
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5978 return s |
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|
5979 else: |
|
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|
5980 time.sleep(0.01) |
|
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5981 |
|
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5982 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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5983 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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5984 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
5985 |
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|
5986 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
509
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|
5987 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
5988 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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|
5989 'Resources' : [ i ], |
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|
5990 'StorageCommitment' : True, |
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|
5991 })) |
|
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5992 |
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5993 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
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5994 'Resources' : [ i ], |
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5995 'StorageCommitment' : False, |
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5996 }) |
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5997 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5998 |
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|
5999 j = DoPost(_REMOTE, '/modalities/self/store', { |
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6000 'Resources' : [ i ], |
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6001 'StorageCommitment' : True, |
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6002 }) |
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6003 |
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6004 transaction = j['StorageCommitmentTransactionUID'] |
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6005 self.assertTrue(transaction.startswith('2.25.')) |
|
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6006 |
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|
6007 result = WaitTransaction(transaction) |
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6008 self.assertEqual('ORTHANC', result['RemoteAET']) |
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6009 self.assertEqual('Success', result['Status']) |
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6010 self.assertEqual(1, len(result['Success'])) |
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|
6011 self.assertEqual(0, len(result['Failures'])) |
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6012 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
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|
6013 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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|
6014 result['Success'][0]['SOPInstanceUID']) |
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6015 |
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|
6016 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6017 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
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6018 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
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6019 |
|
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6020 |
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6021 def test_store_straight(self): # New in Orthanc 1.6.1 |
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6022 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6023 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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6024 |
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6025 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
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6026 dicom = f.read() |
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6027 |
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6028 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6029 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6030 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6031 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6032 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6033 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6034 answer['SOPClassUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6035 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6036 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6037 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6038 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6039 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6040 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6041 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6042 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6043 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6044 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6045 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6046 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6047 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6048 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6049 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6050 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6051 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6052 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6053 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6054 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6055 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6056 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6057 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6058 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6059 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6060 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6061 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6062 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6063 |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6064 # Export, with transcoding disabled => this fails with 0.8.6 but not with more recent versions |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6065 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6066 DoPut(_REMOTE, '/modalities/toto', params) |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6067 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6068 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6069 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6070 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
6071 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6072 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6073 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6074 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6075 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6076 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6077 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6078 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6079 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6080 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6081 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6082 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6083 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6084 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6085 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6086 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6087 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6088 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6089 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6090 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6091 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6092 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6093 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6094 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6095 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6096 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6097 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6098 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6099 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
6100 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6101 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6102 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6103 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6104 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6105 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6106 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6107 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6108 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6109 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6110 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6111 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6112 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6113 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
6114 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6115 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6116 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6117 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6118 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6119 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6120 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6121 |
| 304 | 6122 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6123 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6124 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6125 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6126 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6127 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6128 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6129 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6130 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6131 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6132 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6133 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6134 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6135 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6136 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6137 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6138 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6139 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6140 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6141 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6142 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6143 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6144 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6145 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6146 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6147 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6148 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6149 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6150 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6151 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6152 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6153 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6154 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6155 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6156 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6157 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6158 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6159 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6160 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6161 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6162 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6163 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6164 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6165 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6166 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6167 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6168 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6169 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6170 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6171 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6172 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6173 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6174 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6175 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6176 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6177 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6178 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6179 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6180 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6181 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6182 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6183 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6184 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6185 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6186 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6187 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6188 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6189 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6190 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6191 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6192 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6193 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6194 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6195 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6196 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6197 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6198 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6199 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6200 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6201 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6202 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6203 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6204 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6205 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6206 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6207 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6208 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6209 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6210 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6211 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6212 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6213 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6214 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6215 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6216 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6217 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6218 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6219 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6220 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6221 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6222 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6223 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6224 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6225 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6226 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6227 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6228 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6229 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6230 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6231 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6232 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6233 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6234 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6235 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6236 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6237 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6238 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6239 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6240 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6241 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6242 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6243 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6244 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6245 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6246 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6247 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6248 |
| 308 | 6249 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6250 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6251 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6252 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6253 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6254 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6255 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6256 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6257 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6258 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6259 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6260 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6261 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6262 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6263 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6264 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6265 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6266 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6267 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6268 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6269 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6270 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6271 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6272 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6273 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6274 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6275 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6276 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6277 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6278 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6279 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6280 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6281 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6282 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6283 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6284 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6285 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6286 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6287 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6288 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6289 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6290 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6291 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6292 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6293 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6294 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6295 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6296 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6297 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6298 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6299 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6300 |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6301 def test_modify_need_force_to_change_uids(self): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6302 def Modify(level, resourceId, replaceTags, force, keepSource): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6303 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6304 'Replace' : replaceTags, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6305 'Force': force, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6306 'KeepSource' : keepSource |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6307 }) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6308 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6309 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6310 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6311 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6312 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6313 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6314 # can not change the StudyInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6315 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6316 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6317 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6318 # can not change the SeriesInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6319 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6320 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6321 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6322 # can not change the SOPInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6323 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6324 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6325 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6326 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6327 # can not change the PatientID of a study unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6328 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6329 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6330 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6331 |
| 500 | 6332 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6333 # this was forbidden even with Force=true till 1.11.2 included |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6334 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6335 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6336 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6337 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6338 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6339 def test_modify_study_module_reconstruction(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6340 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6341 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6342 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6343 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6344 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6345 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6346 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6347 UploadFolder(_REMOTE, 'Knee/T2') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6348 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6349 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6350 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6351 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6352 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6353 'Replace' : replaceTags, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6354 'Force': force, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6355 'KeepSource' : keepSource |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6356 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6357 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6358 return (modifyResponse, modifiedResource) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6359 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6360 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6361 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6362 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6363 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6364 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6365 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6366 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6367 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6368 ####### study level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6369 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6370 # modify study description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6371 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6372 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6373 'StudyDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6374 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6375 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6376 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6377 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6378 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6379 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6380 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6381 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6382 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6383 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6384 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6385 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6386 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6387 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6388 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6389 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6390 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6391 'PatientID': 'TOTO_ID', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6392 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6393 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6394 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6395 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6396 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6397 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6398 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6399 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6400 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6401 ####### series level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6402 # modify series description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6403 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6404 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6405 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6406 'SeriesDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6407 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6408 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6409 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6410 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6411 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6412 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6413 def test_rename_patient_with_multiple_studies(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6414 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6415 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6416 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6417 patientDicomId = 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6418 patientName = 'Test' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6419 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6420 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6421 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6422 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6423 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6424 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6425 # each sub-test is in a dedicated 'if' for clarity |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6426 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6427 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6428 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6429 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6430 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6431 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6432 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6433 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6434 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6435 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6436 # rename the patient (at patient level) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6437 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6438 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6439 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6440 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6441 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6442 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6443 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6444 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6445 # make sure the patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6446 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6447 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6448 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6449 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6450 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6451 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6452 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6453 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6454 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6455 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6456 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6457 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6458 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6459 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6460 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6461 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6462 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6463 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6464 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6465 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6466 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6467 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6468 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6469 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6470 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6471 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6472 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6473 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6474 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6475 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6476 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6477 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6478 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6479 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6480 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6481 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6482 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6483 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6484 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6485 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6486 # would have the same orthanc ids as the source ids -> they would be deleted |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6487 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6488 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6489 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6490 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6491 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6492 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6493 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6494 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6495 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6496 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6497 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6498 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6499 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6500 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6501 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6502 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6503 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6504 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6505 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6506 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6507 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6508 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6509 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6510 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6511 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6512 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6513 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6514 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6515 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6516 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6517 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6518 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6519 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6520 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6521 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6522 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6523 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6524 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6525 # try to attach the knee study to an existing patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6526 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6527 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6528 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6529 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6530 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6531 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6532 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6533 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6534 # this should fail if only specifying the PatientID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6535 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6536 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6537 'PatientID': 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6538 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6539 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6540 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6541 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6542 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6543 # this should fail if specifying all tags but one of them is not correct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6544 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6545 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6546 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6547 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6548 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6549 'PatientSex': 'F' # this is wrong ! |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6550 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6551 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6552 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6553 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6554 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6555 # this should fail if specifying a tag that is not defined in DB for that patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6556 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6557 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6558 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6559 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6560 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6561 'PatientSex': 'M', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6562 '0010,1000': 'TUTU' # this does not exist in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6563 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6564 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6565 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6566 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6567 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6568 # this should now work with all correct tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6569 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6570 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6571 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6572 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6573 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6574 'PatientSex': 'M' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6575 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6576 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6577 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6578 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6579 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6580 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6581 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6582 # make sure tha patient name remains the same at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6583 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6584 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6585 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6586 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6587 # try to edit patient in Knee (only study from this patient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6588 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6589 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6590 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6591 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6592 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6593 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6594 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6595 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6596 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6597 # try to change the PatientName and StudyDescription at study level. |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6598 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6599 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6600 'PatientName': 'Test Knee', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6601 'StudyDescription': 'Knee study' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6602 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6603 'Keep': ['StudyInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6604 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6605 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6606 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6607 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6608 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6609 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6610 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6611 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6612 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6613 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6614 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6615 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6616 'PatientName': 'Test Knee 2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6617 'PatientID': 'TEST_KNEE_2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6618 'StudyDescription': 'Knee study 2' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6619 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6620 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6621 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6622 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6623 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6624 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6625 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6626 # reload the patient, now, its orthanc id has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6627 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6628 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6629 # the previous patient shall not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6630 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6631 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6632 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6633 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6634 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6635 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6636 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6637 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6638 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6639 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6640 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6641 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6642 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6643 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6644 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6645 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6646 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6647 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6648 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6649 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6650 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6651 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6652 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6653 |
|
ed20ead1a8b6
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6654 for syntax in SYNTAXES: |
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6655 body = { |
|
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6656 'Resources' : [ i ], |
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6657 } |
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6658 |
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6659 if syntax != '1.2.840.10008.1.2.1': |
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6660 body['Transcode'] = syntax |
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6661 |
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6662 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6663 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6664 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
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6665 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6666 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6667 self.assertEqual(syntax, GetTransferSyntax( |
|
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6668 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
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6669 |
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|
6670 DropOrthanc(_LOCAL) |
| 308 | 6671 |
| 6672 | |
| 295 | 6673 def test_getscu(self): |
| 307 | 6674 def CleanTarget(): |
| 6675 if os.path.isdir('/tmp/GETSCU'): | |
| 6676 shutil.rmtree('/tmp/GETSCU') | |
| 6677 os.makedirs('/tmp/GETSCU') | |
| 6678 | |
|
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6679 env = {} |
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6680 if _DOCKER: |
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6681 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
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6682 # and running in a GNU/Linux distribution running DCMTK |
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6683 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
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6684 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
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6685 |
| 295 | 6686 # no transcoding required |
| 307 | 6687 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6688 | |
| 6689 CleanTarget() | |
| 295 | 6690 |
|
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|
6691 subprocess.check_call([ |
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6692 FindExecutable('getscu'), |
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|
6693 _REMOTE['Server'], |
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|
6694 str(_REMOTE['DicomPort']), |
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|
6695 '-aec', 'ORTHANC', |
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|
6696 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6697 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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|
6698 '-k', '0008,0052=STUDY', |
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|
6699 '--output-directory', '/tmp/GETSCU/' |
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|
6700 ], env = env) |
| 295 | 6701 |
| 311 | 6702 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6703 self.assertTrue(os.path.isfile(f1)) | |
| 6704 with open(f1, 'rb') as f: | |
| 6705 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6706 | |
| 307 | 6707 CleanTarget() |
| 295 | 6708 |
| 6709 # transcoding required | |
| 311 | 6710 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6711 |
| 6712 subprocess.check_call([ | |
| 6713 FindExecutable('getscu'), | |
| 6714 _REMOTE['Server'], | |
| 6715 str(_REMOTE['DicomPort']), | |
| 6716 '-aec', 'ORTHANC', | |
| 6717 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6718 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6719 '-k', '0008,0052=STUDY', |
| 6720 '--output-directory', '/tmp/GETSCU/' | |
| 6721 ], env = env) | |
| 6722 | |
| 311 | 6723 self.assertTrue(os.path.isfile(f1)) |
| 6724 with open(f1, 'rb') as f: | |
| 6725 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6726 | |
| 6727 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6728 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6729 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6730 self.assertTrue(os.path.isfile(f2)) | |
| 6731 with open(f2, 'rb') as f: | |
| 6732 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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|
6733 |
|
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|
6734 |
|
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|
6735 def test_findscu_truncation(self): |
|
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|
6736 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
|
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|
6737 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
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|
6738 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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|
6739 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
6740 |
|
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diff
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|
6741 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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|
6742 |
|
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|
6743 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
|
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|
6744 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6745 self.assertEqual(2, len(result)) |
|
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|
6746 |
|
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|
6747 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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|
6748 # study, leading to a string of 249 characters |
|
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diff
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|
6749 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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diff
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|
6750 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
|
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|
6751 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6752 self.assertEqual(1, len(result)) |
|
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|
6753 |
|
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|
6754 # The "StudyInstanceUID" is set as a list of 6 times the same |
|
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6755 # study, leading to a string of 299 characters. In Orthanc <= |
|
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|
6756 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
|
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|
6757 # == 256, and is thus wiped out by C-FIND SCP. As a |
|
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|
6758 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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|
6759 # "StudyInstanceUID" and returns all the available |
|
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|
6760 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
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|
6761 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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|
6762 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
|
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|
6763 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6764 self.assertEqual(1, len(result)) |
|
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|
6765 |
|
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|
6766 |
|
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|
6767 def test_store_compressed(self): |
|
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|
6768 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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|
6769 dicom = f.read() |
|
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|
6770 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
|
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|
6771 sourceSize = len(dicom) |
|
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|
6772 |
|
328
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|
6773 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
6774 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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|
6775 |
|
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|
6776 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
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|
6777 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
6778 _REMOTE, '/peers/peer/store', { |
|
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|
6779 'Resources' : [ i ], |
|
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|
6780 'Synchronous' : False, |
|
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|
6781 })) |
|
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|
6782 |
|
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|
6783 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
6784 self.assertFalse(job['Content']['Compress']) |
|
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|
6785 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
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|
6786 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
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|
6787 |
|
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|
6788 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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6789 DropOrthanc(_LOCAL) |
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6790 |
|
509
17a74118d73a
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|
6791 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
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|
6792 # Sending to the local Orthanc 0.8.6 server, with compression: |
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|
6793 # Not supported by Orthanc 0.8.6 => failure |
|
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6794 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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|
6795 'Resources' : [ i ], |
|
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6796 'Compress' : True, |
|
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|
6797 })) |
|
509
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6798 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6799 |
|
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|
6800 # Sending to the tested remote server, with compression: OK |
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|
6801 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
6802 _REMOTE, '/peers/self/store', { |
|
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|
6803 'Resources' : [ i ], |
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|
6804 'Compress' : True, |
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|
6805 'Synchronous' : False, |
|
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|
6806 })) |
|
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|
6807 |
|
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|
6808 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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|
6809 self.assertTrue(job['Content']['Compress']) |
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|
6810 |
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|
6811 # Compression must have divided the size of the sent data at least twice |
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|
6812 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6813 |
| 6814 | |
| 6815 def test_move_ambra(self): | |
| 6816 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6817 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6818 | |
| 6819 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6820 | |
| 6821 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6822 '--study', | |
| 6823 '-k', 'StudyInstanceUID=' | |
| 6824 ]))) | |
| 6825 | |
| 6826 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6827 '--study', | |
| 6828 '-k', 'AccessionNumber=', | |
| 6829 ]))) | |
| 6830 | |
| 6831 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6832 '--study', | |
| 6833 '-k', 'AccessionNumber=', | |
| 6834 '-k', 'StudyInstanceUID=' | |
| 6835 ]))) | |
| 6836 | |
| 6837 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6838 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6839 '--study', | |
| 6840 '-k', 'AccessionNumber=CT16000988', | |
| 6841 '-k', 'StudyInstanceUID=', | |
| 6842 ]))) | |
| 6843 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6844 DropOrthanc(_LOCAL) | |
| 6845 | |
| 6846 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6847 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6848 '--study', | |
| 6849 '-k', 'AccessionNumber=CT16000988', | |
| 6850 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6851 ]))) | |
| 6852 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6853 DropOrthanc(_LOCAL) | |
| 6854 | |
| 6855 # This fails on Orthanc <= 1.7.3 | |
| 6856 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6857 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6858 '--study', | |
| 6859 '-k', 'AccessionNumber=', | |
| 6860 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6861 ]))) | |
| 6862 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6863 DropOrthanc(_LOCAL) | |
|
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|
6864 |
|
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|
6865 |
|
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|
6866 def test_decode_elscint(self): |
|
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|
6867 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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|
6868 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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|
6869 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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|
6870 |
|
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diff
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|
6871 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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|
6872 self.assertEqual("L", im.mode) |
|
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|
6873 self.assertEqual(512, im.size[0]) |
|
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|
6874 self.assertEqual(512, im.size[1]) |
|
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|
6875 |
|
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|
6876 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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|
6877 self.assertEqual("L", im.mode) |
|
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|
6878 self.assertEqual(512, im.size[0]) |
|
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|
6879 self.assertEqual(512, im.size[1]) |
|
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|
6880 |
|
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changeset
|
6881 # The two tests below fail on Orthanc <= 1.7.3 |
|
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|
6882 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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|
6883 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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|
6884 |
|
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changeset
|
6885 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
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|
6886 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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|
6887 |
|
334
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|
6888 |
|
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diff
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|
6889 def test_rest_modalities_in_study_2(self): |
|
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|
6890 # Problem reported by Alain Mazy on 2020-09-15 |
|
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|
6891 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
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|
6892 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
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|
6893 |
|
335
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changeset
|
6894 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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|
6895 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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changeset
|
6896 self.assertEqual(1, len(modalitiesInStudy)) |
|
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changeset
|
6897 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
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changeset
|
6898 |
|
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diff
changeset
|
6899 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
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|
6900 # The empty string '' corresponds to universal matching. |
|
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|
6901 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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changeset
|
6902 |
|
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diff
changeset
|
6903 if i in [ 'UX', 'UX\\MR' ]: |
|
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|
6904 expected = 0 |
|
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|
6905 else: |
|
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changeset
|
6906 expected = 1 |
|
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|
6907 |
|
334
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diff
changeset
|
6908 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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|
6909 'Query' : { 'ModalitiesInStudy' : i }}) |
|
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|
6910 self.assertEqual(expected, len(a)) |
|
334
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|
6911 |
|
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diff
changeset
|
6912 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
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|
6913 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
6914 self.assertEqual(expected, len(studyInstanceUid)) |
|
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|
6915 |
|
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|
6916 |
|
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|
6917 def test_webdav(self): |
|
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|
6918 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
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|
6919 |
|
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|
6920 for suffix in [ '', '/' ]: |
|
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|
6921 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
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|
6922 self.assertEqual(1, len(f)) |
|
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|
6923 self.assertTrue('/webdav/' in f.keys()) |
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|
6924 self.assertTrue(f['/webdav/']['folder']) |
|
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|
6925 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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changeset
|
6926 |
|
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changeset
|
6927 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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|
6928 self.assertEqual(6, len(f)) |
|
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|
6929 self.assertTrue(f['/webdav/']['folder']) |
|
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changeset
|
6930 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6931 |
|
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more tests of webdav
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341
diff
changeset
|
6932 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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diff
changeset
|
6933 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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diff
changeset
|
6934 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
6935 |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6936 for depth in [ 0, 1 ]: |
|
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parents:
341
diff
changeset
|
6937 for suffix2 in [ '', '/' ]: |
|
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more tests of webdav
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parents:
341
diff
changeset
|
6938 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6939 |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6940 if i == 'uploads': |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6941 # Empty folders might still exist in "/uploads/" |
|
bf8369ea3ff1
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parents:
341
diff
changeset
|
6942 self.assertTrue('/webdav/uploads/' in g) |
|
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more tests of webdav
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parents:
341
diff
changeset
|
6943 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6944 for j in g.items(): |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6945 self.assertTrue(g.items()[0][1]['folder']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6946 else: |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6947 self.assertEqual(1, len(g)) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6948 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6949 self.assertTrue(g.items()[0][1]['folder']) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6950 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6951 |
|
342
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6952 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6953 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
6954 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6955 |
|
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6956 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6957 time.sleep(0.01) |
|
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6958 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6959 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6960 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6961 def test_log_categories(self): |
| 350 | 6962 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6963 |
| 350 | 6964 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6965 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6966 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
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parents:
348
diff
changeset
|
6967 |
| 350 | 6968 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6969 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6970 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6971 |
| 350 | 6972 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6973 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6974 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6975 |
| 350 | 6976 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6977 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6978 # Switch back to the original log level |
| 350 | 6979 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6980 | |
| 6981 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6982 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6983 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6984 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6985 |
| 6986 | |
| 6987 def test_upload_zip(self): | |
| 6988 f = StringIO() | |
| 6989 with zipfile.ZipFile(f, 'w') as z: | |
| 6990 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6991 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6992 c = g.read() | |
| 6993 z.writestr('hello/world/dicom1.dcm', c) | |
| 6994 z.writestr('hello/world/dicom2.dcm', c) | |
| 6995 | |
| 6996 f.seek(0) | |
| 6997 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6998 | |
| 6999 self.assertEqual(2, len(i)) | |
| 7000 self.assertEqual(i[0], i[1]) | |
| 7001 self.assertEqual(6, len(i[0])) | |
| 7002 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 7003 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 7004 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 7005 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 7006 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 7007 | |
| 7008 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 7009 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7010 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7011 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7012 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7013 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7014 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
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parents:
359
diff
changeset
|
7015 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7016 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7017 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7018 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7019 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7020 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7021 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7022 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7023 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7024 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7025 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7026 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7027 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7028 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7029 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7030 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7031 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7032 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7033 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7034 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7035 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7036 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7037 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7038 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7039 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7040 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7041 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7042 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7043 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7044 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7045 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7046 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7047 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7048 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7049 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7050 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7051 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7052 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7053 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7054 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7055 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7056 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7057 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7058 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7059 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7060 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7061 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7062 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7063 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7064 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7065 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7066 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7067 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7068 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7069 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7070 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7071 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7072 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7073 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7074 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7075 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7076 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7077 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7078 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7079 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7080 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7081 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7082 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7083 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7084 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7085 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7086 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7087 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7088 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7089 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7090 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7091 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7092 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7093 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7094 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7095 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7096 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7097 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7098 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7099 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7100 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7101 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7102 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7103 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7104 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7105 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7106 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7107 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7108 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7109 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7110 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7111 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7112 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7113 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7114 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7115 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7116 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7117 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7118 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7119 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7120 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7121 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7122 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7123 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7124 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7125 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7126 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7127 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7128 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7129 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7130 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7131 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7132 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7133 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7134 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7135 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7136 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7137 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7138 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7139 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 6): |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7140 self.assertEqual(3, len(peer)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7141 self.assertEqual(5, peer['DatabaseVersion']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7142 self.assertEqual('MyOrthanc', peer['Name']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7143 self.assertEqual('0.8.6', peer['Version']) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7144 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7145 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7146 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7147 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7148 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7149 # "ParentStudy", "ParentSeries" are not reported |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7150 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
7151 self.assertEqual(3, len(j)) |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
7152 else: |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7153 self.assertEqual(6, len(j)) |
|
382
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added test_peer_store_straight
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|
7154 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
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added test_peer_store_straight
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|
7155 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
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added test_peer_store_straight
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diff
changeset
|
7156 self.assertEqual('Success', j['Status']) |
|
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added test_peer_store_straight
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diff
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|
7157 |
|
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added test_peer_store_straight
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parents:
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|
7158 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
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added test_peer_store_straight
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|
7159 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 7160 |
| 7161 | |
| 7162 def test_cp246(self): | |
| 7163 # This fails on Orthanc <= 1.9.0 | |
| 7164 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 7165 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 7166 | |
| 7167 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 7168 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 7169 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 7170 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 7171 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 7172 | |
| 7173 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 7174 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 7175 | |
| 7176 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 7177 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 7178 | |
| 7179 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 7180 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 7181 | |
|
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parents:
390
diff
changeset
|
7182 |
|
392
5cbcb4a83b41
fix for revisions of attachments
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parents:
391
diff
changeset
|
7183 def test_revisions_metadata(self): |
|
391
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diff
changeset
|
7184 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
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diff
changeset
|
7185 # was introduced in 1.9.2), or if configuration option |
|
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diff
changeset
|
7186 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
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diff
changeset
|
7187 # related to revisions mimic CouchDB: |
|
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diff
changeset
|
7188 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
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diff
changeset
|
7189 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
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diff
changeset
|
7190 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7191 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
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diff
changeset
|
7192 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7193 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
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diff
changeset
|
7194 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
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diff
changeset
|
7195 |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7196 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7197 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7198 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7199 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7200 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7201 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7202 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7203 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7204 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7205 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7206 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7207 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7208 }) |
|
227d9a932467
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parents:
390
diff
changeset
|
7209 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7210 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
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parents:
390
diff
changeset
|
7211 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7212 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7213 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7214 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
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testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7215 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7216 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7217 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7218 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7219 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7220 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7221 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7222 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7223 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7224 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7225 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7226 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7227 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7228 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7229 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7230 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7231 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7232 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7233 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7234 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7235 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7236 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7237 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7238 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7239 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7240 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7241 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7242 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7243 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7244 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7245 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7246 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7247 self.assertEqual('', body) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7248 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7249 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7250 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7251 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7252 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7253 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7254 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7255 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7256 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7257 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7258 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7259 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7260 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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394
diff
changeset
|
7261 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
7262 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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390
diff
changeset
|
7263 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7264 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7265 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7266 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7267 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7268 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7269 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7270 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7271 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7272 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7273 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7274 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7275 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7276 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7277 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7278 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7279 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7280 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7281 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7282 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7283 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7284 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7285 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7286 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7287 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7288 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7289 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7290 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7291 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7292 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7293 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7294 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7295 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7296 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7297 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7298 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7299 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7300 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7301 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7302 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7303 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7304 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7305 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7306 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7307 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7308 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7309 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7310 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7311 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7312 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7313 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7314 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7315 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7316 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7317 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7318 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7319 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7320 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7321 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7322 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7323 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7324 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7325 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7326 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7327 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7328 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7329 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7330 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7331 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7332 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7333 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7334 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7335 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7336 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7337 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7338 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7339 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7340 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7341 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7342 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7343 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7344 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7345 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7346 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7347 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7348 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7349 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7350 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7351 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7352 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7353 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7354 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7355 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7356 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7357 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7358 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7359 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7360 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7361 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7362 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7363 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7364 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7365 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7366 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7367 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7368 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7369 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7370 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7371 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7372 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7373 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7374 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7375 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7376 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7377 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7378 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7379 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7380 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7381 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7382 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7383 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7384 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7385 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7386 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7387 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7388 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7389 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7390 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7391 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7392 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7393 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7394 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7395 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7396 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7397 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7398 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7399 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7400 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7401 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7402 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7403 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7404 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7405 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7406 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7407 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7408 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7409 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7410 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7411 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7412 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7413 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7414 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7415 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7416 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7417 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7418 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7419 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7420 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7421 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7422 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7423 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7424 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7425 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7426 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7427 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7428 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7429 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7430 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7431 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7432 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7433 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7434 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7435 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7436 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7437 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7438 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7439 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7440 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7441 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7442 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7443 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7444 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7445 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7446 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7447 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7448 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7449 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7450 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7451 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7452 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7453 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7454 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7455 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7456 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7457 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7458 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7459 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7460 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7461 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7462 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7463 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7464 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7465 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7466 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7467 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7468 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7469 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7470 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7471 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7472 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7473 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7474 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7475 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7476 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7477 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7478 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7479 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7480 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7481 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7482 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7483 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7484 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7485 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7486 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7487 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7488 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7489 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7490 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7491 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7492 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7493 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7494 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7495 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7496 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7497 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7498 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7499 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7500 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7501 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7502 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7503 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7504 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7505 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7506 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7507 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7508 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7509 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7510 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7511 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7512 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7513 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7514 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7515 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7516 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7517 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7518 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7519 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7520 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7521 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7522 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7523 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7524 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7525 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7526 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7527 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7528 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7529 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7530 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7531 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7532 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7533 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7534 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7535 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7536 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7537 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7538 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7539 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7540 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7541 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7542 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7543 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7544 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7545 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7546 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7547 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7548 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7549 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7550 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7551 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7552 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7553 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7554 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7555 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7556 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7557 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7558 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7559 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7560 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7561 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7562 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7563 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7564 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7565 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7566 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7567 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7568 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7569 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7570 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7571 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7572 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7573 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7574 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7575 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7576 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7577 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7578 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7579 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7580 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7581 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7582 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7583 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7584 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7585 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7586 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7587 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7588 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7589 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7590 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7591 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7592 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7593 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7594 |
| 7595 | |
| 7596 def test_issue_146(self): | |
| 7597 # "Update Anonyization to 2019c" | |
| 7598 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7599 | |
| 7600 def GetTags(study, params): | |
| 7601 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7602 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7603 self.assertEqual(1, len(b)) | |
| 7604 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7605 | |
| 7606 | |
| 7607 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7608 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7609 | |
| 7610 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7611 | |
| 7612 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7613 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7614 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7615 tagsDefault = GetTags(study, {}) | |
| 7616 | |
| 420 | 7617 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7618 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7619 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7620 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7621 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7622 | |
| 7623 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7624 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7625 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7626 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7627 self.assertEqual('YES', t['0012,0062']) | |
| 7628 | |
| 7629 for t in [ tags2008 ]: | |
| 7630 self.assertEqual('20200101', t['0008,0020']) | |
| 7631 | |
| 7632 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7633 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7634 | |
| 7635 for t in [ tags2008, tags2017c ]: | |
| 7636 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7637 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7638 | |
| 7639 for t in [ tags2021b, tagsDefault ]: | |
| 7640 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7641 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7642 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7643 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7644 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7645 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7646 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7647 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7648 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7649 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7650 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7651 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7652 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7653 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7654 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7655 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7656 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7657 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7658 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7659 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7660 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7661 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7662 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7663 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7664 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7665 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7666 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7667 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7668 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7669 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7670 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7671 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7672 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7673 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7674 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7675 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7676 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7677 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7678 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7679 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7680 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7681 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7682 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7683 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7684 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7685 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7686 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7687 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7688 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7689 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7690 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7691 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7692 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7693 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7694 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7695 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7696 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7697 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7698 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7699 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7700 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7701 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7702 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7703 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7704 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7705 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7706 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7707 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7708 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7709 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7710 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7711 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7712 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7713 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7714 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7715 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7716 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7717 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7718 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7719 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7720 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7721 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7722 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7723 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7724 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7725 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7726 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7727 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7728 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7729 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7730 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7731 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7732 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7733 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7734 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7735 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7736 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7737 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7738 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7739 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7740 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7741 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7742 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7743 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7744 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7745 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7746 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7747 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7748 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7749 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7750 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7751 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7752 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7753 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7754 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7755 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7756 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7757 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7758 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7759 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7760 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7761 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7762 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7763 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7764 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7765 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7766 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7767 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7768 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7769 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7770 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7771 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7772 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7773 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7774 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7775 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7776 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7777 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7778 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7779 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7780 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7781 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7782 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7783 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7784 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7785 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7786 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7787 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7788 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7789 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7790 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7791 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7792 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7793 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7794 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7795 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7796 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7797 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7798 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7799 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7800 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7801 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7802 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7803 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7804 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7805 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7806 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7807 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7808 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7809 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7810 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7811 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7812 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7813 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7814 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7815 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7816 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7817 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7818 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7819 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7820 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7821 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7822 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7823 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7824 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7825 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7826 |
| 7827 | |
| 7828 def test_bulk_modify(self): | |
| 7829 # New in Orthanc 1.9.4 | |
| 7830 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7831 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7832 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7833 if expectedCount != None: |
| 7834 self.assertEqual(expectedCount, len(m)) | |
| 7835 return m | |
| 7836 | |
| 7837 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7838 series = DoGet(_REMOTE, '/series') [0] | |
| 7839 study = DoGet(_REMOTE, '/studies') [0] | |
| 7840 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7841 | |
| 7842 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7843 'Resources' : [ instance ] | |
| 7844 }) | |
| 7845 | |
| 7846 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7847 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7848 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7849 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7850 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7851 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7852 'Resources' : [ instance ] |
| 7853 }) | |
| 7854 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7855 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7856 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7857 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7858 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7859 |
| 7860 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7861 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7862 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7863 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7864 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7865 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7866 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7867 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7868 |
| 410 | 7869 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7870 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7871 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7872 | |
| 7873 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7874 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7875 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7876 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7877 | |
| 7878 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7879 'Resources' : [ knee1, brainix ] | |
| 7880 }) | |
| 7881 | |
| 7882 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7883 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7884 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7885 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7886 | |
| 7887 for i in GetModified(a, 'Instance', 2): | |
| 7888 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7889 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7890 | |
| 7891 b = GetModified(a, 'Series', 2) | |
| 7892 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7893 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7894 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7895 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7896 | |
| 7897 b = GetModified(a, 'Study', 2) | |
| 7898 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7899 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7900 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7901 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7902 | |
| 7903 b = GetModified(a, 'Patient', 2) | |
| 7904 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7905 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7906 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7907 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7908 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7909 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7910 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7911 }) |
| 410 | 7912 |
| 7913 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7914 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7915 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7916 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7917 self.assertEqual(4, len(sourceInstances)) | |
| 7918 self.assertEqual(4, len(sourceSeries)) | |
| 7919 self.assertEqual(3, len(sourceStudies)) | |
| 7920 self.assertEqual(3, len(sourcePatients)) | |
| 7921 | |
| 7922 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7923 'Resources' : [ knee1, brainix ] | |
| 7924 }) | |
| 7925 | |
| 7926 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7927 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7928 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7929 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7930 | |
| 7931 for i in GetModified(a, 'Instance', 2): | |
| 7932 self.assertFalse(i in sourceInstances) | |
| 7933 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7934 | |
| 7935 for i in GetModified(a, 'Series', 2): | |
| 7936 self.assertFalse(i in sourceSeries) | |
| 7937 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7938 | |
| 7939 for i in GetModified(a, 'Study', 2): | |
| 7940 self.assertFalse(i in sourceStudies) | |
| 7941 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7942 | |
| 7943 for i in GetModified(a, 'Patient', 2): | |
| 7944 self.assertFalse(i in sourcePatients) | |
| 7945 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7946 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7947 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7948 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7949 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7950 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7951 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7952 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7953 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7954 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7955 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7956 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7957 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7958 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7959 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7960 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7961 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7962 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7963 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7964 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7965 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7966 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7967 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7968 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7969 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7970 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7971 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7972 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7973 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7974 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7975 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7976 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7977 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7978 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7979 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7980 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7981 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7982 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7983 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7984 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7985 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7986 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7987 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7988 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7989 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7990 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7991 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7992 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7993 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7994 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7995 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7996 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7997 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7998 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7999 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8000 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8001 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8002 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8003 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8004 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8005 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8006 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8007 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8008 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8009 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8010 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8011 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8012 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8013 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8014 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8015 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8016 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8017 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8018 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8019 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8020 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8021 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8022 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8023 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8024 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8025 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8026 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8027 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8028 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8029 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8030 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8031 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8032 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8033 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8034 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8035 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8036 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8037 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8038 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8039 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8040 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8041 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8042 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8043 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8044 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8045 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8046 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8047 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8048 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8049 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8050 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8051 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8052 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8053 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8054 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8055 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8056 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8057 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8058 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8059 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8060 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8061 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8062 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8063 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8064 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8065 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8066 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8067 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8068 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8069 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8070 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8071 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8072 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8073 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8074 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8075 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8076 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8077 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8078 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8079 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8080 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8081 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8082 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8083 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8084 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8085 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8086 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8087 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8088 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8089 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8090 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8091 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8092 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8093 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8094 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8095 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8096 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8097 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8098 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8099 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8100 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8101 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8102 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8103 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8104 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8105 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8106 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8107 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8108 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8109 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8110 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8111 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8112 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8113 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8114 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8115 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8116 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8117 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8118 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8119 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8120 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8121 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8122 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8123 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8124 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8125 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8126 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8127 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8128 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8129 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8130 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8131 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8132 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8133 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8134 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8135 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8136 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8137 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8138 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8139 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8140 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8141 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8142 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8143 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8144 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8145 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8146 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8147 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8148 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8149 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8150 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8151 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8152 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8153 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8154 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8155 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8156 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8157 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8158 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8159 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8160 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8161 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8162 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8163 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8164 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8165 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8166 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8167 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8168 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8169 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8170 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8171 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8172 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8173 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 8174 |
| 8175 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 8176 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 8177 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 8178 | |
| 8179 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 8180 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 8181 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 8182 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 8183 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 8184 | |
| 8185 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 8186 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 8187 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 8188 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 8189 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 8190 | |
| 8191 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 8192 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 8193 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 8194 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 8195 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 8196 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8197 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8198 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8199 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8200 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8201 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8202 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8203 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8204 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8205 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8206 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8207 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8208 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8209 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8210 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8211 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8212 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8213 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8214 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8215 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8216 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8217 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8218 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8219 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8220 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8221 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8222 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8223 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8224 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8225 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8226 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8227 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8228 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8229 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8230 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8231 |
| 415 | 8232 |
| 8233 def test_bulk_content(self): | |
| 8234 # New in Orthanc 1.9.4 | |
| 8235 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 8236 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8237 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8238 | |
| 8239 brainixHierarchy = [ | |
| 8240 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 8241 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 8242 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 8243 brainix, | |
| 8244 ] | |
| 8245 | |
| 8246 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 8247 self.assertEqual(4, len(a)) | |
| 8248 b = map(lambda x: x['ID'], a) | |
| 8249 for i in range(4): | |
| 8250 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8251 self.assertTrue('Metadata' in a[i]) |
| 415 | 8252 |
| 8253 for (level, index) in [ | |
| 8254 ('Patient', 0), | |
| 8255 ('Study', 1), | |
| 8256 ('Series', 2), | |
| 8257 ('Instance', 3), | |
| 8258 ]: | |
| 8259 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 8260 'Level' : level }) | |
| 8261 self.assertEqual(1, len(a)) | |
| 8262 self.assertEqual(level, a[0]['Type']) | |
| 8263 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8264 self.assertTrue('Metadata' in a[0]) |
| 415 | 8265 |
| 8266 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8267 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8268 'Metadata' : False }) |
| 415 | 8269 self.assertEqual(1, len(a)) |
| 8270 self.assertEqual(level, a[0]['Type']) | |
| 8271 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8272 self.assertFalse('Metadata' in a[0]) |
| 415 | 8273 |
| 8274 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 8275 self.assertEqual(3, len(a)) | |
| 8276 for item in a: | |
| 8277 self.assertEqual('Instance', item['Type']) | |
| 8278 b = map(lambda x: x['ID'], a) | |
| 8279 self.assertTrue(knee1 in b) | |
| 8280 self.assertTrue(knee2 in b) | |
| 8281 self.assertTrue(brainix in b) | |
| 8282 | |
| 8283 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 8284 'Level' : 'Series' }) | |
| 8285 self.assertEqual(2, len(a)) | |
| 8286 for item in a: | |
| 8287 self.assertEqual('Series', item['Type']) | |
| 8288 b = map(lambda x: x['ID'], a) | |
| 8289 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 8290 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 8291 | |
| 8292 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8293 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8294 'Metadata' : False }) |
| 415 | 8295 self.assertEqual(1, len(a)) |
| 8296 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 8297 self.assertEqual('Study', a[0]['Type']) | |
| 8298 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8299 self.assertFalse('Metadata' in a[0]) |
| 415 | 8300 |
| 8301 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8302 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8303 'Metadata' : True }) |
| 415 | 8304 self.assertEqual(1, len(a)) |
| 8305 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 8306 self.assertEqual('Patient', a[0]['Type']) | |
| 8307 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8308 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8309 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8310 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8311 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8312 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8313 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8314 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 8315 |
| 8316 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 8317 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 8318 'Level' : level }) | |
| 8319 self.assertEqual(2, len(a)) | |
| 8320 for item in a: | |
| 8321 self.assertEqual(level, item['Type']) | |
| 8322 b = map(lambda x: x['ID'], a) | |
| 8323 if level == 'Instance': | |
| 8324 self.assertTrue(knee1 in b) | |
| 8325 self.assertTrue(brainix in b) | |
| 8326 else: | |
| 8327 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 8328 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8329 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8330 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8331 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8332 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8333 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8334 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8335 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8336 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8337 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8338 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8339 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8340 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8341 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8342 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8343 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8344 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8345 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8346 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8347 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8348 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8349 |
| 417 | 8350 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 8351 'KeepSource' : False | |
| 8352 })) # Neither "Instances", nor "Series" | |
| 8353 | |
| 8354 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8355 'KeepSource' : False, | |
| 8356 'Instances' : [ ], | |
| 8357 'Series' : [ ] | |
| 8358 })) # Empty "Instances" and "Series" | |
| 8359 | |
| 8360 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8361 'Instances' : [ 'nope' ], | |
| 8362 'KeepSource' : False | |
| 8363 })) | |
| 8364 | |
| 8365 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8366 'Series' : [ 'nope' ], | |
| 8367 'KeepSource' : False | |
| 8368 })) | |
| 8369 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8370 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8371 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8372 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8373 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8374 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8375 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8376 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8377 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8378 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8379 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8380 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8381 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8382 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8383 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8384 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8385 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8386 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8387 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8388 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8389 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8390 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8391 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8392 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8393 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8394 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8395 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8396 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8397 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8398 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8399 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8400 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8401 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8402 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8403 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8404 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8405 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8406 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8407 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8408 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8409 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8410 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8411 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8412 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8413 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8414 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8415 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8416 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8417 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8418 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8419 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8420 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8421 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8422 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8423 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8424 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8425 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8426 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8427 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8428 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8429 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8430 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8431 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8432 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8433 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8434 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8435 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8436 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8437 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8438 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8439 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8440 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8441 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8442 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8443 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8444 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8445 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8446 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8447 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8448 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8449 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8450 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8451 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8452 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8453 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8454 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8455 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8456 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8457 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8458 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8459 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8460 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8461 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8462 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8463 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8464 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8465 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8466 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8467 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8468 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8469 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8470 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8471 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8472 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8473 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8474 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8475 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8476 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8477 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8478 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8479 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8480 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8481 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8482 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8483 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8484 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8485 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8486 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8487 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8488 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8489 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8490 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8491 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8492 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8493 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8494 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8495 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8496 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8497 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8498 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8499 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8500 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8501 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8502 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8503 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8504 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8505 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8506 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8507 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8508 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8509 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8510 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8511 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8512 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8513 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8514 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8515 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8516 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8517 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8518 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8519 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8520 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8521 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8522 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8523 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8524 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8525 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8526 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8527 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8528 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8529 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8530 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8531 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8532 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8533 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8534 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8535 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8536 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8537 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8538 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8539 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8540 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8541 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8542 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8543 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8544 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8545 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8546 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8547 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8548 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8549 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8550 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8551 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8552 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8553 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8554 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8555 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8556 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8557 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8558 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8559 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8560 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8561 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8562 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8563 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8564 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8565 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8566 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8567 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8568 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8569 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8570 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8571 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8572 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8573 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8574 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8575 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8576 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8577 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8578 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8579 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8580 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8581 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8582 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8583 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8584 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8585 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8586 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8587 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8588 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8589 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8590 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8591 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8592 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8593 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8594 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8595 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8596 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8597 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8598 |
| 8599 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8600 self.assertEqual(1, len(last)) | |
| 8601 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8602 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8603 |
| 8604 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8605 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8606 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8607 | |
| 8608 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8609 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8610 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8611 | |
| 8612 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8613 self.assertEqual(1, len(last)) | |
| 8614 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8615 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8616 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8617 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8618 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8619 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8620 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8621 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8622 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8623 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8624 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8625 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8626 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8627 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8628 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8629 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8630 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8631 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8632 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8633 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8634 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8635 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8636 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8637 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8638 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8639 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8640 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8641 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8642 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8643 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8644 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8645 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8646 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8647 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8648 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8649 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8650 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8651 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8652 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8653 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8654 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8655 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8656 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8657 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8658 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8659 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8660 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8661 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8662 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8663 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8664 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8665 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8666 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8667 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8668 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8669 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8670 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8671 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8672 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8673 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8674 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8675 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8676 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8677 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8678 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8679 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8680 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8681 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8682 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8683 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8684 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8685 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8686 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8687 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8688 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8689 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8690 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8691 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8692 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8693 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8694 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8695 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8696 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8697 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8698 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8699 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8700 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8701 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8702 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8703 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8704 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8705 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8706 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8707 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8708 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8709 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8710 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8711 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8712 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8713 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8714 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8715 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8716 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8717 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8718 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8719 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8720 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8721 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8722 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8723 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8724 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8725 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8726 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8727 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8728 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8729 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8730 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8731 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8732 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8733 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8734 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8735 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8736 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8737 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8738 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8739 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8740 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8741 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8742 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8743 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8744 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8745 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8746 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8747 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8748 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8749 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8750 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8751 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8752 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8753 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8754 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8755 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8756 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8757 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8758 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8759 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8760 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8761 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8762 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8763 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8764 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8765 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8766 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8767 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8768 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8769 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8770 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8771 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8772 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8773 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8774 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8775 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8776 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8777 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8778 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8779 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8780 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8781 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8782 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8783 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8784 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8785 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8786 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8787 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8788 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8789 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8790 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8791 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8792 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8793 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8794 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8795 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8796 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8797 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8798 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8799 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8800 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8801 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8802 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8803 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8804 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8805 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8806 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8807 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8808 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8809 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8810 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8811 |
| 8812 | |
| 8813 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8814 # New in Orthanc 1.10.0 |
| 440 | 8815 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 8816 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8817 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8818 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 8819 |
| 8820 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8821 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8822 self.assertEqual(numpy.float32, c.dtype) | |
| 8823 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8824 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8825 self.assertAlmostEqual(536, c.max()) |
| 440 | 8826 |
| 8827 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8828 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8829 self.assertEqual(numpy.uint16, c.dtype) | |
| 8830 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8831 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8832 self.assertEqual(536, c.max()) |
| 440 | 8833 |
| 8834 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8835 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8836 self.assertEqual(numpy.float32, c.dtype) | |
| 8837 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8838 | |
| 8839 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8840 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8841 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8842 self.assertEqual(numpy.float32, c.dtype) | |
| 8843 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8844 | |
| 8845 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8846 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8847 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8848 self.assertEqual(numpy.float32, c.dtype) | |
| 8849 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8850 | |
| 8851 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8852 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8853 self.assertEqual(1, len(c.files)) | |
| 8854 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8855 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8856 | |
| 8857 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8858 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8859 self.assertEqual(numpy.float32, c.dtype) | |
| 8860 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8861 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8862 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8863 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8864 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8865 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8866 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8867 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8868 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8869 self.assertAlmostEqual(255, c.max()) |
| 440 | 8870 |
| 8871 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8872 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8873 self.assertEqual(numpy.float32, c.dtype) | |
| 8874 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8875 | |
| 8876 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8877 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8878 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8879 self.assertEqual(numpy.float32, c.dtype) | |
| 8880 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8881 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8882 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8883 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8884 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8885 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8886 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8887 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8888 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8889 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8890 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8891 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8892 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8893 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8894 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8895 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8896 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8897 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8898 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8899 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8900 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8901 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8902 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8903 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8904 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8905 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8906 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8907 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8908 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8909 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8910 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8911 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
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added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8912 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8913 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8914 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8915 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8916 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8917 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8918 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8919 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8920 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8921 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8922 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8923 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8924 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8925 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8926 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8927 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8928 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8929 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8930 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8931 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8932 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8933 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8934 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8935 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8936 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8937 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8938 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8939 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8940 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8941 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8942 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8943 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8944 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8945 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8946 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8947 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8948 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8949 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8950 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8951 self.assertEqual(1, len(a)) |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8952 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8953 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8954 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8955 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8956 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8957 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8958 def test_rest_find_requested_tags(self): |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8959 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
| 471 | 8960 |
| 8961 # Upload instances | |
| 8962 for i in range(2): | |
| 8963 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 8964 | |
| 8965 # Patient level | |
| 8966 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 8967 'CaseSensitive' : False, | |
| 8968 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
8969 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
| 471 | 8970 'Expand': True |
| 8971 }) | |
| 8972 self.assertEqual(1, len(a)) | |
| 8973 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8974 self.assertIn('PatientID', a[0]['RequestedTags']) | |
| 8975 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
| 8976 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
| 8977 | |
| 8978 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8979 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
| 8980 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
| 8981 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
| 8982 | |
| 8983 # Study level, request patient tags too | |
| 8984 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 8985 'CaseSensitive' : False, | |
| 8986 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 8987 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
| 8988 'Expand': True | |
| 8989 }) | |
| 8990 self.assertEqual(1, len(a)) | |
| 8991 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 8992 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 8993 | |
| 8994 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8995 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 8996 | |
| 8997 | |
| 8998 # Series level, request patient and study tags too | |
| 8999 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9000 'CaseSensitive' : False, | |
| 9001 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9002 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
| 471 | 9003 'Expand': True |
| 9004 }) | |
| 9005 self.assertEqual(1, len(a)) | |
| 9006 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9007 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9008 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9009 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9010 |
| 9011 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9012 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9013 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9014 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
| 471 | 9015 |
| 9016 | |
| 9017 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
| 9018 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9019 'CaseSensitive' : False, | |
| 9020 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9021 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
| 471 | 9022 'Expand': True |
| 9023 }) | |
| 9024 self.assertEqual(1, len(a)) | |
| 9025 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9026 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9027 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
| 9028 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9029 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9030 |
| 9031 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9032 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9033 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9034 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9035 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9036 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9037 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9038 def test_rest_find_requested_tags_computed_tags(self): |
| 471 | 9039 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9040 # Upload instances | |
| 9041 for i in range(2): | |
| 9042 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9043 | |
| 9044 | |
| 9045 # Patient level | |
| 9046 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9047 'CaseSensitive' : False, | |
| 9048 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9049 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
| 9050 'Expand': True | |
| 9051 }) | |
| 9052 self.assertEqual(1, len(a)) | |
| 9053 | |
| 9054 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9055 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
| 9056 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
| 9057 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
| 9058 | |
| 9059 # Study level | |
| 9060 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9061 'CaseSensitive' : False, | |
| 9062 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9063 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
| 9064 'Expand': True | |
| 9065 }) | |
| 9066 self.assertEqual(1, len(a)) | |
| 9067 | |
| 9068 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9069 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9070 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9071 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9072 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9073 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
| 9074 | |
| 9075 # Series level | |
| 9076 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9077 'CaseSensitive' : False, | |
| 9078 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9079 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
| 9080 'Expand': True | |
| 9081 }) | |
| 9082 self.assertEqual(1, len(a)) | |
| 9083 | |
| 9084 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9085 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9086 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
| 9087 | |
| 9088 # Instance level | |
| 9089 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 9090 'CaseSensitive' : False, | |
| 9091 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9092 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 9093 'Expand': True | |
| 9094 }) | |
| 9095 self.assertEqual(2, len(a)) | |
| 9096 | |
| 9097 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9098 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9099 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 456 | 9100 |
|
452
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9101 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9102 |
| 471 | 9103 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9104 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9105 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9106 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9107 | |
| 9108 # list series and request tags that are not in the default main dicom tags | |
| 9109 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
| 9110 | |
| 9111 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
| 9112 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
| 9113 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9114 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9115 | |
| 9116 # list studies and request patient and studies tags | |
| 9117 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
| 9118 | |
| 9119 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9120 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9121 | |
| 9122 | |
| 9123 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
| 9124 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
| 9125 | |
| 9126 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9127 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9128 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
| 9129 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9130 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
| 9131 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
| 9132 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9133 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9134 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9135 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9136 |
| 471 | 9137 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9138 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9139 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9140 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9141 | |
| 9142 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9143 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
| 9144 | |
| 9145 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9146 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9147 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9148 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9149 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9150 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9151 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9152 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9153 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9154 |
| 471 | 9155 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9156 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9157 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9158 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9159 | |
| 9160 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9161 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
| 9162 | |
| 9163 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9164 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9165 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9166 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9167 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9168 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 9169 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9170 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9171 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9172 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9173 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9174 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9175 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9176 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
|
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9177 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9178 def test_create_png16RBGA(self): |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9179 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9180 png = f.read() |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9181 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9182 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9183 json.dumps({ |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9184 'PatientName' : 'Jodogne', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9185 'Modality' : 'CT', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9186 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9187 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9188 })) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9189 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9190 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9191 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9192 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9193 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9194 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9195 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9196 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9197 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9198 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9199 j = DoGet(_REMOTE, i['Path']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9200 self.assertEqual('Instance', j['Type']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9201 self.assertEqual(j['ID'], i['ID']) |
|
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9202 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9203 def test_storescu_custom_host_ip_port(self): |
| 510 | 9204 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
| 9205 DropOrthanc(_LOCAL) | |
| 9206 DropOrthanc(_REMOTE) | |
| 9207 | |
| 9208 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 9209 | |
| 9210 # upload to self -> orthanctest shall not receive any content | |
| 9211 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9212 'Resources' : [ a['ID']] | |
| 9213 }) | |
| 9214 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 9215 | |
| 9216 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content | |
| 9217 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') | |
| 9218 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9219 'LocalAet' : 'YOP', | |
| 9220 'CalledAet' : c['AET'], | |
| 9221 'Port' : c['Port'], | |
| 9222 'Host' : c['Host'], | |
| 9223 'Resources' : [ a['ID']] | |
| 9224 }) | |
| 9225 | |
| 9226 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 9227 | |
| 9228 DropOrthanc(_REMOTE) | |
| 9229 DropOrthanc(_LOCAL) | |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9230 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9231 def test_rle_planar_configuration(self): |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9232 # This test failed in Orthanc <= 1.11.2 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9233 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9234 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9235 uri = '/instances/%s/preview' % a |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9236 im = GetImage(_REMOTE, uri) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9237 self.assertEqual('RGB', im.mode) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9238 self.assertEqual(1475, im.size[0]) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9239 self.assertEqual(1475, im.size[1]) |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9240 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) |