Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 466:28a2c9452ec9 more-tags
extra test with empty filter ModalitiesInStudy
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Wed, 20 Apr 2022 14:44:29 +0200 |
| parents | 4e944cedf1a9 |
| children | fc1c3ffed470 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2022 Osimis S.A., Belgium |
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9 # Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 10 # |
| 11 # This program is free software: you can redistribute it and/or | |
| 12 # modify it under the terms of the GNU General Public License as | |
| 13 # published by the Free Software Foundation, either version 3 of the | |
| 14 # License, or (at your option) any later version. | |
| 15 # | |
| 16 # This program is distributed in the hope that it will be useful, but | |
| 17 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 18 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 19 # General Public License for more details. | |
| 20 # | |
| 21 # You should have received a copy of the GNU General Public License | |
| 22 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 23 | |
| 24 | |
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25 import base64 |
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26 import bz2 |
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27 import copy |
| 440 | 28 import io |
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29 import numpy |
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30 import pprint |
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31 import shutil |
| 14 | 32 import tempfile |
| 3 | 33 import unittest |
| 34 | |
| 11 | 35 from PIL import ImageChops |
| 3 | 36 from Toolbox import * |
| 13 | 37 from xml.dom import minidom |
| 312 | 38 from datetime import datetime |
| 3 | 39 |
| 40 _LOCAL = None | |
| 41 _REMOTE = None | |
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42 _DOCKER = False |
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43 |
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44 |
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45 def SetOrthancParameters(local, remote, withinDocker): |
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46 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 47 _LOCAL = local |
| 48 _REMOTE = remote | |
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49 _DOCKER = withinDocker |
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50 |
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51 |
| 14 | 52 def ExtractDicomTags(rawDicom, tags): |
| 53 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 54 f.write(rawDicom) | |
| 55 f.flush() | |
| 45 | 56 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 57 |
| 58 result = [] | |
| 59 for tag in tags: | |
| 60 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 61 if match == None: | |
| 62 result.append('') | |
| 63 else: | |
| 64 result.append(match.group(1)) | |
| 65 | |
| 66 return result | |
| 67 | |
| 68 | |
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69 def CompareLists(a, b): |
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70 if len(a) != len(b): |
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71 return False |
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72 |
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73 for i in range(len(a)): |
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74 d = a[i] - b[i] |
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75 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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76 return False |
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77 |
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78 return True |
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79 |
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80 |
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81 def CompareTags(a, b, tagsToIgnore): |
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82 for i in tagsToIgnore: |
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83 if i in a: |
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84 del a[i] |
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85 if i in b: |
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86 del b[i] |
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87 |
| 123 | 88 if a.keys() == b.keys(): |
| 89 return True | |
| 90 else: | |
| 91 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 92 return False | |
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93 |
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94 |
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95 def CallFindScu(args): |
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96 p = subprocess.Popen([ FindExecutable('findscu'), |
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97 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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98 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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99 stderr=subprocess.PIPE) |
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100 return p.communicate()[1] |
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101 |
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102 |
| 142 | 103 def GetMoveScuCommand(): |
| 104 return [ | |
| 105 FindExecutable('movescu'), | |
| 106 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 107 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 108 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 109 _REMOTE['Server'], | |
| 110 str(_REMOTE['DicomPort']) | |
| 111 ] | |
| 112 | |
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113 |
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114 def IsDicomUntilPixelDataStored(orthanc): |
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115 # This function detects whether the "StorageCompression" option is |
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116 # "true", OR the storage area does not support read-range |
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117 |
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118 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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119 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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120 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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121 if a != 0x03a0: |
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122 raise Exception('Internal error') |
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123 |
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124 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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125 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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126 raise Exception('Internal error') |
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127 |
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128 DoDelete(orthanc, '/instances/%s' % i) |
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129 |
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130 if len(a) == 1: |
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131 return False |
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132 elif 'dicom-until-pixel-data' in a: |
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133 return True |
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134 else: |
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135 raise Exception('Internal error') |
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136 |
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137 else: |
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138 return False |
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139 |
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140 |
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141 def CallMoveScu(args): |
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142 try: |
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143 subprocess.check_call(GetMoveScuCommand() + args, |
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144 stderr = subprocess.PIPE) |
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145 except subprocess.CalledProcessError as e: |
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146 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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147 # that has been introduced in DCMTK 3.6.2. This error code is |
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148 # expected by some tests that try and C-MOVE non-existing |
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149 # DICOM instances. |
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150 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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151 if e.returncode != 69: |
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152 raise e |
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153 |
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154 |
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155 def GenerateTestSequence(): |
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156 return [ |
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157 { |
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158 'StudyDescription': 'Hello^', |
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159 'ReferencedStudySequence' : [ |
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160 { |
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161 'StudyDescription': 'Toto', |
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162 }, |
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163 { |
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164 'StudyDescription': 'Tata', |
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165 }, |
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166 ] |
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167 }, |
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168 { |
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169 'StudyDescription': 'Sébastien^', |
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170 'StudyDate' : '19700202', |
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171 } |
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172 ] |
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173 |
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174 |
| 3 | 175 class Orthanc(unittest.TestCase): |
| 176 def setUp(self): | |
| 83 | 177 if (sys.version_info >= (3, 0)): |
| 178 # Remove annoying warnings about unclosed socket in Python 3 | |
| 179 import warnings | |
| 180 warnings.simplefilter("ignore", ResourceWarning) | |
| 181 | |
| 3 | 182 DropOrthanc(_LOCAL) |
| 183 DropOrthanc(_REMOTE) | |
| 174 | 184 UninstallLuaCallbacks(_REMOTE) |
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185 |
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186 # Reset stuff possibly set by some integration tests |
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187 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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188 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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189 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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190 |
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191 for i in [ 'toto', 'tata' ]: |
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192 if i in DoGet(_REMOTE, '/modalities'): |
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193 DoDelete(_REMOTE, '/modalities/%s' % i) |
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194 if i in DoGet(_REMOTE, '/peers'): |
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195 DoDelete(_REMOTE, '/peers/%s' % i) |
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196 |
| 312 | 197 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
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198 |
|
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199 def AssertSameImages(self, truth, url): |
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200 im = GetImage(_REMOTE, url) |
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201 self.assertTrue(CompareLists(truth, im.getdata())) |
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202 |
| 3 | 203 |
| 204 def test_system(self): | |
| 177 | 205 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 206 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 207 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 208 | |
| 209 systemInfo = DoGet(_REMOTE, '/system') | |
| 210 if systemInfo["Version"] == "mainline": | |
| 211 print "Skipping version checks since you're currently in mainline" | |
| 212 return | |
| 213 | |
| 173 | 214 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
| 215 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
| 216 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
| 217 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
| 218 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
| 3 | 219 |
| 456 | 220 system = DoGet(_REMOTE, '/system') |
| 221 self.assertIn("MainDicomTags", system) | |
| 222 self.assertIn("Patient", system["MainDicomTags"]) | |
| 223 self.assertIn("Studies", system["MainDicomTags"]) | |
| 224 self.assertIn("Series", system["MainDicomTags"]) | |
| 225 self.assertIn("Instance", system["MainDicomTags"]) | |
| 226 | |
| 227 | |
| 3 | 228 def test_upload(self): |
| 173 | 229 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 230 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 231 | |
| 232 sizeDummyCT = 2472 | |
| 233 sizeOverwrite = 2476 | |
| 234 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 235 | |
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236 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 237 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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238 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 239 self.assertEqual(instance, u['ID']) |
| 3 | 240 self.assertEqual('Success', u['Status']) |
| 173 | 241 |
| 183 | 242 if True: |
| 243 # New test for Orthanc 1.4.3 | |
| 244 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 245 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 246 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 247 | |
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248 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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249 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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250 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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251 j = 0 |
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252 else: |
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253 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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254 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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255 |
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256 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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257 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 258 |
| 259 if isCompressed: | |
| 260 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 261 else: | |
| 262 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 263 | |
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264 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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265 self.assertIn('Uuid', attachmentInfo) |
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266 self.assertEqual(1, attachmentInfo['ContentType']) |
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267 |
| 173 | 268 s = sizeDummyCT + j |
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269 |
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270 if isCompressed: |
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271 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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272 else: |
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273 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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274 |
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275 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 276 |
| 3 | 277 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 278 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 279 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 280 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 281 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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282 |
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283 if isCompressed: |
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284 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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285 else: |
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286 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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287 |
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288 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 289 |
| 290 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 291 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 292 self.assertEqual('KNIX', i['PatientName']) |
| 293 | |
| 294 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 295 # Overwriting | |
| 296 self.assertEqual('Success', u['Status']) | |
| 297 else: | |
| 298 self.assertEqual('AlreadyStored', u['Status']) | |
| 299 | |
| 300 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 301 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 302 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 303 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 304 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 305 | |
| 306 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 307 # Overwriting | |
| 308 self.assertEqual('Success', u['Status']) | |
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309 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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310 j2 = 0 |
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311 else: |
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312 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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313 self.assertNotEqual(j, j2) |
| 173 | 314 s2 = sizeOverwrite + j2 |
| 315 self.assertNotEqual(s, s2) | |
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316 if isCompressed: |
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317 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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318 else: |
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319 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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320 |
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321 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 322 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 323 self.assertEqual('ANOTHER', i['PatientName']) | |
| 324 else: | |
| 325 self.assertEqual('AlreadyStored', u['Status']) | |
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326 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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327 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 328 |
| 5 | 329 def test_upload_2(self): |
| 3 | 330 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 331 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 332 self.assertEqual(i, instance['ID']) | |
| 333 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 334 instance['MainDicomTags']['SOPInstanceUID']) | |
| 335 | |
| 336 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 337 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 338 series['MainDicomTags']['SeriesInstanceUID']) | |
| 339 | |
| 340 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 341 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 342 study['MainDicomTags']['StudyInstanceUID']) | |
| 343 | |
| 344 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 345 self.assertEqual('ozp00SjY2xG', | |
| 346 patient['MainDicomTags']['PatientID']) | |
| 347 | |
| 348 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 349 self.assertEqual(2472, len(dicom)) | |
| 350 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 351 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 352 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 353 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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354 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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355 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 356 |
| 357 | |
| 5 | 358 def test_images(self): |
| 359 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 360 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 361 |
| 5 | 362 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 363 self.assertEqual("L", im.mode) | |
| 364 self.assertEqual(512, im.size[0]) | |
| 365 self.assertEqual(358, im.size[1]) | |
| 366 | |
| 367 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 368 self.assertEqual("L", im.mode) | |
| 369 self.assertEqual(512, im.size[0]) | |
| 370 self.assertEqual(358, im.size[1]) | |
| 371 | |
| 372 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 373 self.assertEqual(512, im.size[0]) | |
| 374 self.assertEqual(358, im.size[1]) | |
| 375 | |
| 376 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 377 self.assertEqual("L", im.mode) | |
| 378 self.assertEqual(512, im.size[0]) | |
| 379 self.assertEqual(358, im.size[1]) | |
| 380 | |
| 381 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 382 self.assertEqual("L", im.mode) | |
| 383 self.assertEqual(512, im.size[0]) | |
| 384 self.assertEqual(358, im.size[1]) | |
| 385 | |
| 386 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 387 self.assertEqual(512, im.size[0]) | |
| 388 self.assertEqual(358, im.size[1]) | |
| 64 | 389 |
| 390 # This is Little Endian Explicit | |
| 391 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 392 | |
| 6 | 393 |
| 394 def test_hierarchy(self): | |
| 395 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 396 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 397 UploadFolder(_REMOTE, 'Knee/T1') | |
| 398 UploadFolder(_REMOTE, 'Knee/T2') | |
| 399 | |
| 400 p = DoGet(_REMOTE, '/patients') | |
| 401 s = DoGet(_REMOTE, '/studies') | |
| 402 t = DoGet(_REMOTE, '/series') | |
| 403 self.assertEqual(2, len(p)) | |
| 404 self.assertEqual(2, len(s)) | |
| 405 self.assertEqual(4, len(t)) | |
| 406 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 407 | |
| 408 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 409 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 410 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 411 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 412 | |
| 413 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 414 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 415 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 416 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 417 | |
| 418 self.assertTrue(brainixPatient in p) | |
| 419 self.assertTrue(kneePatient in p) | |
| 420 self.assertTrue(brainixStudy in s) | |
| 421 self.assertTrue(kneeStudy in s) | |
| 422 self.assertTrue(brainixEpi in t) | |
| 423 self.assertTrue(brainixFlair in t) | |
| 424 self.assertTrue(kneeT1 in t) | |
| 425 self.assertTrue(kneeT2 in t) | |
| 426 | |
| 427 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 428 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 429 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 430 | |
| 431 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 432 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 433 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 434 | |
| 435 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 436 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 437 | |
| 438 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 439 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 440 | |
| 441 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 442 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 443 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 444 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 445 | |
| 446 for patient in p: | |
| 447 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 448 self.assertEqual(patient, study['ParentPatient']) | |
| 449 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 450 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 451 self.assertEqual('Unknown', series['Status']) |
| 6 | 452 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 453 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 454 | |
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455 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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456 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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457 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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458 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 459 |
| 460 | |
| 461 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 462 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 463 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 464 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 465 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 466 self.assertEqual(None, r) | |
| 467 | |
| 468 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 469 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 470 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 471 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 472 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 473 self.assertEqual('Study', r['Type']) | |
| 474 self.assertEqual(kneeStudy, r['ID']) | |
| 475 | |
| 476 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 477 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 478 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 479 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 480 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 481 self.assertEqual('Series', r['Type']) | |
| 482 self.assertEqual(kneeT1, r['ID']) | |
| 483 | |
| 484 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 485 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 486 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 487 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 488 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 489 self.assertEqual(None, r) | |
| 490 | |
| 491 DropOrthanc(_REMOTE) | |
| 492 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 493 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 494 |
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495 def test_delete_cascade(self): |
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496 # make sure deleting the last instance of a study deletes the series, study and patient |
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497 |
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498 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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499 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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500 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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501 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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502 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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503 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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504 |
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505 DoDelete(_REMOTE, '/instances/%s' % a) |
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506 |
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507 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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508 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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509 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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510 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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511 |
| 7 | 512 |
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513 def test_multiframe(self): |
| 7 | 514 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 515 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 516 | |
| 517 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 518 self.assertEqual("L", im.mode) | |
| 519 self.assertEqual(512, im.size[0]) | |
| 520 self.assertEqual(512, im.size[1]) | |
| 521 | |
| 522 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 523 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 524 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 525 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 526 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 527 | |
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528 |
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529 def test_changes(self): |
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530 # Check emptiness |
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531 c = DoGet(_REMOTE, '/changes') |
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532 self.assertEqual(0, len(c['Changes'])) |
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533 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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534 self.assertTrue(c['Done']) |
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535 c = DoGet(_REMOTE, '/changes?last') |
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536 self.assertEqual(0, len(c['Changes'])) |
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537 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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538 self.assertTrue(c['Done']) |
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539 |
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540 # Add 1 instance |
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541 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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542 c = DoGet(_REMOTE, '/changes') |
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543 begin = c['Last'] |
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544 self.assertEqual(4, len(c['Changes'])) |
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545 self.assertTrue(c['Done']) |
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546 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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547 |
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548 # Check the order in which the creation events are reported |
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549 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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550 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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551 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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552 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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553 |
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554 c = DoGet(_REMOTE, '/changes?last') |
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555 self.assertEqual(1, len(c['Changes'])) |
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556 self.assertEqual(begin, c['Last']) |
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557 self.assertTrue(c['Done']) |
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558 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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559 self.assertEqual(1, len(c['Changes'])) |
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560 self.assertEqual(begin, c['Last']) |
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561 self.assertTrue(c['Done']) |
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562 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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563 self.assertEqual(1, len(c['Changes'])) |
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564 self.assertEqual(begin - 1, c['Last']) |
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565 self.assertFalse(c['Done']) |
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566 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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567 self.assertEqual(1, len(c['Changes'])) |
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568 self.assertEqual(begin - 2, c['Last']) |
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569 self.assertFalse(c['Done']) |
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570 |
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571 UploadFolder(_REMOTE, 'Knee/T1') |
|
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|
572 UploadFolder(_REMOTE, 'Knee/T2') |
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changeset
|
573 since = begin |
|
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diff
changeset
|
574 countPatients = 0 |
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parents:
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diff
changeset
|
575 countStudies = 0 |
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changeset
|
576 countSeries = 0 |
|
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|
577 countInstances = 0 |
|
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diff
changeset
|
578 completed = 0 |
|
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changeset
|
579 while True: |
|
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580 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
|
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changeset
|
581 since = c['Last'] |
|
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changeset
|
582 for i in c['Changes']: |
|
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|
583 if i['ResourceType'] == 'Instance': |
|
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584 countInstances += 1 |
|
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585 if i['ResourceType'] == 'Patient': |
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changeset
|
586 countPatients += 1 |
|
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parents:
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diff
changeset
|
587 if i['ResourceType'] == 'Study': |
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|
588 countStudies += 1 |
|
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diff
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|
589 if i['ResourceType'] == 'Series': |
|
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parents:
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diff
changeset
|
590 countSeries += 1 |
|
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parents:
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diff
changeset
|
591 if i['ChangeType'] == 'NewInstance': |
|
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test_changes, test_archive, test_media_archive
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changeset
|
592 countInstances += 1 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
593 if i['ChangeType'] == 'NewPatient': |
|
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parents:
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diff
changeset
|
594 countPatients += 1 |
|
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test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
595 if i['ChangeType'] == 'NewStudy': |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
596 countStudies += 1 |
|
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parents:
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diff
changeset
|
597 if i['ChangeType'] == 'NewSeries': |
|
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test_changes, test_archive, test_media_archive
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diff
changeset
|
598 countSeries += 1 |
|
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test_changes, test_archive, test_media_archive
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parents:
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diff
changeset
|
599 if i['ChangeType'] == 'CompletedSeries': |
|
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diff
changeset
|
600 completed += 1 |
|
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test_changes, test_archive, test_media_archive
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diff
changeset
|
601 self.assertTrue('ID' in i) |
|
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diff
changeset
|
602 self.assertTrue('Path' in i) |
|
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changeset
|
603 self.assertTrue('Seq' in i) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
604 if c['Done']: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
605 break |
|
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parents:
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diff
changeset
|
606 |
|
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parents:
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diff
changeset
|
607 self.assertEqual(2 * 50, countInstances) |
|
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|
608 self.assertEqual(2 * 1, countPatients) |
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|
609 self.assertEqual(2 * 1, countStudies) |
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|
610 self.assertEqual(2 * 2, countSeries) |
|
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changeset
|
611 self.assertEqual(0, completed) |
|
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parents:
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diff
changeset
|
612 |
|
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diff
changeset
|
613 |
|
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test_changes, test_archive, test_media_archive
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|
614 def test_archive(self): |
|
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615 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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616 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
| 192 | 617 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
| 618 | |
| 619 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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620 self.assertEqual(2, len(z.namelist())) |
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changeset
|
621 |
|
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diff
changeset
|
622 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
|
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|
623 self.assertEqual(2, len(z.namelist())) |
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changeset
|
624 |
|
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changeset
|
625 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
|
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changeset
|
626 self.assertEqual(1, len(z.namelist())) |
|
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changeset
|
627 |
|
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changeset
|
628 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
| 192 | 629 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
| 630 | |
| 631 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
|
8
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|
632 self.assertEqual(2, len(z.namelist())) |
| 192 | 633 |
| 634 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
| 635 'Resources' : [ brainix, knee ] | |
| 636 }) | |
| 637 self.assertEqual(3, len(z.namelist())) | |
|
403
e08e15befa0c
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402
diff
changeset
|
638 |
|
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402
diff
changeset
|
639 z = PostArchive(_REMOTE, '/patients/%s/archive' % knee, { |
|
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changeset
|
640 'Synchronous' : True |
|
e08e15befa0c
test sync POST to /archive
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diff
changeset
|
641 }) |
|
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test sync POST to /archive
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402
diff
changeset
|
642 self.assertEqual(2, len(z.namelist())) |
| 192 | 643 |
|
8
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changeset
|
644 |
|
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changeset
|
645 def test_media_archive(self): |
|
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changeset
|
646 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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changeset
|
647 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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changeset
|
648 |
|
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diff
changeset
|
649 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
|
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changeset
|
650 self.assertEqual(3, len(z.namelist())) |
|
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changeset
|
651 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
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changeset
|
652 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
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changeset
|
653 self.assertTrue('DICOMDIR' in z.namelist()) |
|
f8d781d1d267
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7
diff
changeset
|
654 |
|
f8d781d1d267
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parents:
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diff
changeset
|
655 try: |
|
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diff
changeset
|
656 os.remove('/tmp/DICOMDIR') |
|
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diff
changeset
|
657 except: |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
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diff
changeset
|
658 # The file does not exist |
|
f8d781d1d267
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diff
changeset
|
659 pass |
|
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diff
changeset
|
660 |
|
f8d781d1d267
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diff
changeset
|
661 z.extract('DICOMDIR', '/tmp') |
| 45 | 662 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
8
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changeset
|
663 stderr = subprocess.STDOUT).split('\n') |
|
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diff
changeset
|
664 self.assertEqual(3, len(a)) |
|
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changeset
|
665 self.assertTrue(a[0].startswith('Warning')) |
|
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changeset
|
666 self.assertEqual('BasicDirectory', a[1]) |
|
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changeset
|
667 self.assertEqual('', a[2]) |
|
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diff
changeset
|
668 |
| 45 | 669 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
8
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changeset
|
670 stderr = subprocess.STDOUT).split('\n') |
|
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changeset
|
671 self.assertEqual(1, len(a)) |
|
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changeset
|
672 self.assertEqual('', a[0]) |
|
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diff
changeset
|
673 |
| 45 | 674 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
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diff
changeset
|
675 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
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changeset
|
676 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
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diff
changeset
|
677 |
|
f8d781d1d267
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diff
changeset
|
678 os.remove('/tmp/DICOMDIR') |
| 10 | 679 |
| 680 | |
| 681 def test_protection(self): | |
| 682 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 683 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 684 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 685 a = DoGet(_REMOTE, '/patients')[0] | |
| 686 b = DoGet(_REMOTE, '/patients')[1] | |
| 687 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 688 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 689 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 690 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 691 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 692 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 693 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 694 | |
| 695 | |
| 12 | 696 def test_raw_tags(self): |
| 10 | 697 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 698 | |
| 699 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 700 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 701 | |
| 702 s = '/instances/%s/content/' % i | |
| 703 | |
| 704 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 705 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 706 | |
| 707 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 708 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 709 | |
| 710 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 711 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 712 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 713 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 714 | |
| 715 for i in DoGet(_REMOTE, '/instances'): | |
| 716 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 717 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 718 | |
| 719 | |
| 720 def test_raw_tags_mdn(self): | |
| 721 # Bug reported by Cyril Paulus | |
| 722 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 723 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 724 | |
| 725 | |
| 726 def test_modify_instance(self): | |
| 727 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 728 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 729 json.dumps({ | |
| 730 "Replace" : { | |
| 731 "PatientName" : "hello", | |
| 732 #"PatientID" : "world" | |
| 733 }, | |
| 734 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
735 "RemovePrivateTags" : True |
| 10 | 736 }), |
| 737 'application/json') | |
| 738 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 739 | |
| 740 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 741 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 742 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 743 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 744 | |
| 745 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 746 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 747 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 748 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 749 | |
| 750 | |
| 751 def test_modify_series(self): | |
| 752 # Upload 4 images from the same series | |
| 753 for i in range(4): | |
| 754 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 755 | |
| 756 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 757 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 758 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 759 'application/json')['ID'] | |
| 760 | |
| 761 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 762 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 763 self.assertEqual(4, len(instances)) | |
| 764 for i in instances: | |
| 765 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 766 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 767 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 768 | |
| 769 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 770 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 771 | |
| 772 | |
| 773 def test_modify_study(self): | |
| 774 # Upload 4 images from the 2 series of the same study | |
| 775 for i in range(4): | |
| 776 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 777 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 778 | |
| 779 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 780 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 781 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 782 'application/json')['ID'] | |
| 783 | |
| 784 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 785 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 786 self.assertEqual(2, len(series)) | |
| 787 for s in series: | |
| 788 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 789 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 790 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 791 | |
| 792 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 793 for i in instances: | |
| 794 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 795 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 796 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 797 | |
| 798 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 799 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 800 | |
| 801 | |
| 802 def test_anonymize_series(self): | |
| 803 # Upload 4 images from the same series | |
| 804 for i in range(4): | |
| 805 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 806 | |
| 807 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 808 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 809 '{}', | |
| 810 'application/json')['ID'] | |
| 811 | |
| 812 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 813 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 814 self.assertEqual(4, len(instances)) | |
| 815 for i in instances: | |
| 816 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 817 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 818 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 819 | |
| 820 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 821 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 822 | |
| 823 | |
| 824 def test_anonymize_study(self): | |
| 825 # Upload 4 images from the 2 series of the same study | |
| 826 for i in range(4): | |
| 827 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 828 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 829 | |
| 830 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 831 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 832 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 833 'application/json')['ID'] | |
| 834 | |
| 835 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 836 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 837 self.assertEqual(2, len(series)) | |
| 838 for s in series: | |
| 839 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 840 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 841 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 842 | |
| 843 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 844 for i in instances: | |
| 845 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 846 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 847 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 848 | |
| 849 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 850 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 851 |
| 852 | |
| 853 | |
| 854 def test_storescu(self): | |
| 855 # Check emptiness | |
| 856 e = DoGet(_REMOTE, '/exports') | |
| 857 self.assertEqual(0, len(e['Exports'])) | |
| 858 self.assertEqual(0, e['Last']) | |
| 859 self.assertTrue(e['Done']) | |
| 860 e = DoGet(_REMOTE, '/exports?last') | |
| 861 self.assertEqual(0, len(e['Exports'])) | |
| 862 self.assertEqual(0, e['Last']) | |
| 863 self.assertTrue(e['Done']) | |
| 864 | |
| 865 # Add 1 instance | |
| 866 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 867 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 868 | |
| 869 # Export the instance | |
| 870 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 871 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 872 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 873 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 874 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 875 | |
| 876 e = DoGet(_REMOTE, '/exports') | |
| 877 self.assertEqual(1, len(e['Exports'])) | |
| 878 self.assertTrue(e['Done']) | |
| 879 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 880 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 881 self.assertEqual(1, len(e['Exports'])) | |
| 882 self.assertTrue(e['Done']) | |
| 883 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 884 e = DoGet(_REMOTE, '/exports?last') | |
| 885 self.assertEqual(1, len(e['Exports'])) | |
| 886 self.assertTrue(e['Done']) | |
| 887 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 888 seqInstance = e['Last'] | |
| 889 | |
| 890 # Export the series | |
| 891 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 892 | |
| 893 e = DoGet(_REMOTE, '/exports') | |
| 894 self.assertEqual(2, len(e['Exports'])) | |
| 895 self.assertTrue(e['Done']) | |
| 896 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 897 seqSeries = e['Last'] | |
| 898 self.assertNotEqual(seqInstance, seqSeries) | |
| 899 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 900 self.assertEqual(1, len(e['Exports'])) | |
| 901 self.assertFalse(e['Done']) | |
| 902 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 903 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 904 self.assertEqual(1, len(e['Exports'])) | |
| 905 self.assertTrue(e['Done']) | |
| 906 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 907 e = DoGet(_REMOTE, '/exports?last') | |
| 908 self.assertEqual(1, len(e['Exports'])) | |
| 909 self.assertTrue(e['Done']) | |
| 910 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 911 | |
| 912 # Export the study | |
| 913 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 914 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 915 | |
| 916 # Export the patient | |
| 917 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 918 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 919 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 920 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 921 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 922 | |
| 923 e = DoGet(_REMOTE, '/exports') | |
| 924 self.assertEqual(4, len(e['Exports'])) | |
| 925 self.assertTrue(e['Done']) | |
| 926 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 927 seqPatient = e['Last'] | |
| 928 self.assertNotEqual(seqInstance, seqSeries) | |
| 929 self.assertNotEqual(seqSeries, seqStudy) | |
| 930 self.assertNotEqual(seqStudy, seqPatient) | |
| 931 self.assertTrue(seqInstance < seqSeries) | |
| 932 self.assertTrue(seqSeries < seqStudy) | |
| 933 self.assertTrue(seqStudy < seqPatient) | |
| 934 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 935 self.assertEqual(1, len(e['Exports'])) | |
| 936 self.assertFalse(e['Done']) | |
| 937 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 938 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 939 self.assertEqual(1, len(e['Exports'])) | |
| 940 self.assertFalse(e['Done']) | |
| 941 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 942 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 943 self.assertEqual(1, len(e['Exports'])) | |
| 944 self.assertFalse(e['Done']) | |
| 945 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 946 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 947 self.assertEqual(1, len(e['Exports'])) | |
| 948 self.assertTrue(e['Done']) | |
| 949 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 950 e = DoGet(_REMOTE, '/exports?last') | |
| 951 self.assertEqual(1, len(e['Exports'])) | |
| 952 self.assertTrue(e['Done']) | |
| 953 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 954 | |
| 955 | |
| 956 # Check the content of the logged information | |
| 957 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 958 | |
| 959 if 'PatientID' in e[0]: | |
| 960 # Since Orthanc 0.8.6 | |
| 961 patient = 'PatientID' | |
| 962 study = 'StudyInstanceUID' | |
| 963 series = 'SeriesInstanceUID' | |
| 964 instance = 'SOPInstanceUID' | |
| 965 else: | |
| 966 # Up to Orthanc 0.8.5 | |
| 967 patient = 'PatientId' | |
| 968 study = 'StudyInstanceUid' | |
| 969 series = 'SeriesInstanceUid' | |
| 970 instance = 'SopInstanceUid' | |
| 971 | |
| 972 for k in range(4): | |
| 973 self.assertTrue('Date' in e[k]) | |
| 974 self.assertTrue('Seq' in e[k]) | |
| 975 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 976 | |
| 977 self.assertEqual(10, len(e[0])) | |
| 978 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 979 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 980 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 981 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 982 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 983 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 984 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 985 | |
| 986 self.assertEqual(9, len(e[1])) | |
| 987 self.assertEqual('Series', e[1]['ResourceType']) | |
| 988 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 989 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 990 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 991 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 992 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 993 | |
| 994 self.assertEqual(8, len(e[2])) | |
| 995 self.assertEqual('Study', e[2]['ResourceType']) | |
| 996 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 997 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 998 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 999 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1000 | |
| 1001 self.assertEqual(7, len(e[3])) | |
| 1002 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1003 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1004 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1005 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1006 | |
| 1007 DropOrthanc(_REMOTE) | |
| 1008 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1009 | |
| 1010 | |
| 1011 def test_store_peer(self): | |
| 1012 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1013 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1014 | |
| 1015 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1016 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1017 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1018 | |
| 1019 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1020 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1021 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1022 | |
| 1023 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1024 | |
| 1025 DropOrthanc(_REMOTE) | |
| 1026 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1027 | |
| 1028 | |
| 1029 def test_bulk_storescu(self): | |
| 1030 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1031 | |
| 1032 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1033 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1034 | |
| 1035 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1036 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1037 | |
| 1038 DropOrthanc(_LOCAL) | |
| 1039 | |
| 1040 # Send using patient's UUID | |
| 1041 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1042 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1043 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1044 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1045 | |
| 1046 | |
| 1047 def test_color(self): | |
| 1048 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1049 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1050 self.assertEqual("RGB", im.mode) | |
| 1051 self.assertEqual(41, im.size[0]) | |
| 1052 self.assertEqual(41, im.size[1]) | |
| 1053 | |
| 1054 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1055 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1056 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1057 | |
| 1058 | |
| 12 | 1059 def test_faking_ruby_put(self): |
| 1060 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1061 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1062 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1063 a = DoGet(_REMOTE, '/patients')[0] | |
| 1064 b = DoGet(_REMOTE, '/patients')[1] | |
| 1065 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1066 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1067 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1068 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1069 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1070 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1071 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1072 | |
| 1073 | |
| 1074 def test_faking_ruby_delete(self): | |
| 1075 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1076 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1077 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1078 a = DoGet(_REMOTE, '/patients')[0] | |
| 1079 b = DoGet(_REMOTE, '/patients')[1] | |
| 1080 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1081 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1082 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1083 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1084 | |
| 1085 | |
| 1086 def test_faking_google_put(self): | |
| 1087 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1088 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1089 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1090 a = DoGet(_REMOTE, '/patients')[0] | |
| 1091 b = DoGet(_REMOTE, '/patients')[1] | |
| 1092 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1093 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1094 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1095 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1096 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1097 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1098 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1099 | |
| 1100 | |
| 1101 def test_faking_google_delete(self): | |
| 1102 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1103 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1104 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1105 a = DoGet(_REMOTE, '/patients')[0] | |
| 1106 b = DoGet(_REMOTE, '/patients')[1] | |
| 1107 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1108 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1109 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1110 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1111 | |
| 1112 | |
| 1113 def test_lua(self): | |
| 1114 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1115 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1116 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1117 | |
| 1118 | |
| 1119 def test_metadata(self): | |
| 1120 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1121 p = DoGet(_REMOTE, '/patients')[0] | |
| 1122 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1123 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1124 |
| 1125 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
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1126 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1127 self.assertEqual(2, len(m)) |
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1128 self.assertTrue('MainDicomTagsSignature' in m) |
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1129 else: |
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1130 self.assertEqual(1, len(m)) |
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1131 self.assertTrue('LastUpdate' in m) |
| 12 | 1132 |
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1133 # The lines below failed on Orthanc <= 1.8.2 |
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1134 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1135 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1136 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1137 |
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1138 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1139 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1140 self.assertEqual(2, len(m)) |
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1141 self.assertTrue('MainDicomTagsSignature' in m) |
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1142 else: |
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1143 self.assertEqual(1, len(m)) |
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1144 self.assertTrue('LastUpdate' in m) |
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1145 |
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1146 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
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1147 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1148 self.assertEqual(3, len(m)) |
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1149 self.assertTrue('MainDicomTagsSignature' in m) |
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1150 else: |
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1151 self.assertEqual(2, len(m)) |
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1152 self.assertTrue('LastUpdate' in m) |
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1153 |
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1154 # New in Orthanc 1.9.0 |
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1155 self.assertTrue('RemoteAET' in m) |
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1156 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1157 |
| 12 | 1158 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
|
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1159 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1160 self.assertEqual(10, len(m)) |
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1161 self.assertTrue('MainDicomTagsSignature' in m) |
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1162 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1163 self.assertEqual(9, len(m)) |
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1164 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1165 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1166 else: |
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1167 self.assertEqual(8, len(m)) |
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1168 |
| 12 | 1169 self.assertTrue('IndexInSeries' in m) |
| 1170 self.assertTrue('ReceptionDate' in m) | |
| 1171 self.assertTrue('RemoteAET' in m) | |
|
63
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1172 self.assertTrue('Origin' in m) |
|
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1173 self.assertTrue('TransferSyntax' in m) |
|
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|
1174 self.assertTrue('SopClassUid' in m) |
| 145 | 1175 self.assertTrue('RemoteIP' in m) |
| 1176 self.assertTrue('HttpUsername' in m) | |
|
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1177 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
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1178 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
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1179 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
89
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1180 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
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1181 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1182 |
| 1183 # Play with custom metadata | |
|
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1184 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
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1185 self.assertEqual('200', headers['status']) |
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1186 self.assertEqual('', body) |
|
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1187 |
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1188 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
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1189 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
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1190 else: |
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1191 self.assertFalse('ETag' in headers) |
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1192 self.assertFalse('etag' in headers) |
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1193 |
| 12 | 1194 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1195 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1196 self.assertEqual(3, len(m)) |
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1197 self.assertTrue('MainDicomTagsSignature' in m) |
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1198 else: |
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1199 self.assertEqual(2, len(m)) |
| 12 | 1200 self.assertTrue('LastUpdate' in m) |
| 1201 self.assertTrue('5555' in m) | |
| 1202 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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1203 |
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1204 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1205 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
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1206 'If-Match' : headers['etag'] |
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1207 }) |
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1208 else: |
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1209 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
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1210 |
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1211 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1212 self.assertEqual('200', headers['status']) |
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1213 self.assertEqual('hello', body) |
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1214 |
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1215 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
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1216 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
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1217 'If-Match' : headers['etag'] |
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1218 }) |
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1219 else: |
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1220 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
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1221 |
| 12 | 1222 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
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1223 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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|
1224 self.assertEqual(2, len(m)) |
|
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|
1225 self.assertTrue('MainDicomTagsSignature' in m) |
|
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|
1226 else: |
|
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|
1227 self.assertEqual(1, len(m)) |
| 12 | 1228 self.assertTrue('LastUpdate' in m) |
| 13 | 1229 |
| 1230 | |
| 1231 def test_statistics(self): | |
| 1232 # Upload 16 instances | |
| 1233 for i in range(4): | |
| 1234 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1235 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1236 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1237 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1238 | |
| 1239 s = DoGet(_REMOTE, '/statistics') | |
| 1240 self.assertEqual(16, s['CountInstances']) | |
| 1241 self.assertEqual(2, s['CountPatients']) | |
| 1242 self.assertEqual(2, s['CountStudies']) | |
| 1243 self.assertEqual(4, s['CountSeries']) | |
| 1244 d = int(s['TotalUncompressedSize']) | |
| 1245 | |
| 1246 e = 0 | |
| 1247 for patient in DoGet(_REMOTE, '/patients'): | |
| 1248 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1249 self.assertEqual(8, s['CountInstances']) | |
| 1250 self.assertEqual(1, s['CountStudies']) | |
| 1251 self.assertEqual(2, s['CountSeries']) | |
| 1252 e += int(s['UncompressedSize']) | |
| 1253 | |
| 1254 for study in DoGet(_REMOTE, '/studies'): | |
| 1255 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1256 self.assertEqual(8, s['CountInstances']) | |
| 1257 self.assertEqual(2, s['CountSeries']) | |
| 1258 e += int(s['UncompressedSize']) | |
| 1259 | |
| 1260 for series in DoGet(_REMOTE, '/series'): | |
| 1261 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1262 self.assertEqual(4, s['CountInstances']) | |
| 1263 e += int(s['UncompressedSize']) | |
| 1264 | |
| 1265 self.assertEqual(3 * d, e) | |
| 1266 | |
| 1267 | |
| 1268 def test_custom_attachment(self): | |
|
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1269 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
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1270 |
| 13 | 1271 patient = DoGet(_REMOTE, '/patients')[0] |
| 1272 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1273 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1274 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1275 | |
| 1276 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1277 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
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|
1278 |
|
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|
1279 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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1280 if IsDicomUntilPixelDataStored(_REMOTE): |
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1281 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
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1282 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
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1283 |
|
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|
1284 # New in Orthanc 1.10.0 |
|
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1285 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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1286 self.assertEqual(2, len(a)) |
|
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1287 self.assertEqual(1, a['dicom']) |
|
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1288 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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|
1289 |
|
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1290 else: |
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|
1291 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1292 |
|
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|
1293 # New in Orthanc 1.10.0 |
|
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|
1294 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1295 self.assertEqual(1, len(a)) |
|
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|
1296 self.assertEqual(1, a['dicom']) |
|
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|
1297 else: |
|
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|
1298 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1299 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1300 |
|
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|
1301 # New in Orthanc 1.10.0 |
|
443
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diff
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|
1302 self.assertRaises(Exception, lambda: DoGet( |
|
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|
1303 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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|
1304 |
| 13 | 1305 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1306 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1307 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1308 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1309 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1310 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1311 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1312 | |
| 1313 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1314 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1315 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1316 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1317 size + | |
| 1318 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1319 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1320 | |
| 1321 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1322 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1323 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1324 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1325 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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|
1326 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
397
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|
1327 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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|
1328 }) |
|
393
3019306499c5
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diff
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|
1329 |
|
394
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|
1330 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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|
1331 self.assertEqual('200', headers['status']) |
|
393
3019306499c5
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diff
changeset
|
1332 self.assertEqual('world2', body) |
| 13 | 1333 |
| 1334 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
392
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changeset
|
1335 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
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changeset
|
1336 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
392
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|
1337 }) |
| 13 | 1338 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1339 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1340 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1341 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1342 | |
| 1343 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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|
1344 |
|
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|
1345 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1346 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
|
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|
1347 'If-Match' : headers['etag'] |
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|
1348 }) |
|
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1349 else: |
|
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|
1350 self.assertFalse('etag' in headers) |
|
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|
1351 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
|
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|
1352 |
| 13 | 1353 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1354 | |
| 1355 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1356 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1357 | |
| 1358 | |
| 1359 def test_incoming_storescu(self): | |
| 1360 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1361 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
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diff
changeset
|
1362 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1363 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1364 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1365 | |
|
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|
1366 i = DoGet(_REMOTE, '/instances') |
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|
1367 self.assertEqual(1, len(i)) |
|
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|
1368 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
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1369 |
|
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|
1370 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1371 self.assertEqual(10, len(m)) |
|
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|
1372 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
|
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1373 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
1374 self.assertEqual(9, len(m)) |
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|
1375 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1376 else: |
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|
1377 self.assertEqual(8, len(m)) |
|
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|
1378 |
|
63
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changeset
|
1379 self.assertTrue('IndexInSeries' in m) |
|
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|
1380 self.assertTrue('ReceptionDate' in m) |
|
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changeset
|
1381 self.assertTrue('RemoteAET' in m) |
|
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|
1382 self.assertTrue('Origin' in m) |
|
89
74b7b9aed5f8
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diff
changeset
|
1383 self.assertTrue('TransferSyntax' in m) |
|
95
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diff
changeset
|
1384 self.assertTrue('SopClassUid' in m) |
| 145 | 1385 self.assertTrue('RemoteIP' in m) |
| 1386 self.assertTrue('CalledAET' in m) | |
|
63
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|
1387 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
|
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changeset
|
1388 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
|
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changeset
|
1389 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
89
74b7b9aed5f8
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changeset
|
1390 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
95
a807a4699eb4
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changeset
|
1391 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
63
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1392 |
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1393 series = DoGet(_REMOTE, '/series')[0] |
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1394 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
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1395 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1396 self.assertEqual(3, len(m)) |
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1397 self.assertTrue('MainDicomTagsSignature' in m) |
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1398 else: |
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1399 self.assertEqual(2, len(m)) |
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1400 self.assertTrue('LastUpdate' in m) |
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1401 self.assertTrue('RemoteAET' in m) |
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1402 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
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1403 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
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1404 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
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1405 |
| 13 | 1406 |
| 1407 def test_incoming_findscu(self): | |
| 1408 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1409 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1410 | |
| 1411 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1412 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1413 self.assertEqual(2, len(patientNames)) | |
| 1414 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1415 self.assertTrue('Anonymized' in patientNames) | |
| 1416 | |
| 1417 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
| 1418 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1419 self.assertEqual(2, len(series)) | |
| 1420 self.assertTrue('20070208' in series) | |
| 1421 self.assertTrue('19980312' in series) | |
| 1422 | |
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1423 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
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1424 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
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1425 self.assertEqual(1, len(series)) |
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1426 self.assertTrue('19980312' in series) |
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1427 |
| 13 | 1428 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1429 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1430 self.assertEqual(1, len(series)) | |
| 1431 | |
| 1432 # Test the "CaseSentitivePN" flag (false by default) | |
| 1433 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1434 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1435 self.assertEqual(1, len(series)) | |
|
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1436 |
| 70 | 1437 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1438 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1439 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1440 self.assertEqual(2, len(studies)) | |
| 1441 self.assertTrue('20070208' in studies) | |
| 1442 self.assertTrue('19980312' in studies) | |
| 1443 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1444 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1445 self.assertEqual(1, len(studies)) | |
| 1446 self.assertTrue('19980312' in studies) | |
| 1447 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1448 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1449 self.assertEqual(1, len(studies)) | |
| 1450 self.assertTrue('19980312' in studies) | |
|
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1451 |
|
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1452 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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1453 # was *not* the case in Orthanc <= 1.7.2 |
|
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1454 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
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|
1455 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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1456 self.assertEqual(2, len(instances)) |
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1457 self.assertEqual('ORTHANC', instances[0].strip()) |
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1458 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1459 |
| 1460 | |
|
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1461 def test_incoming_findscu_2(self): |
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1462 # This test fails if "LookupMode_DatabaseOnly" is used |
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1463 # (sequences are not available in this mode, and only main |
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1464 # DICOM tags are returned) |
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1465 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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1466 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1467 |
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1468 # Test returning sequence values (only since Orthanc 0.9.5) |
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1469 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
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1470 sequences = re.findall('\(0008,2112\)', i) |
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1471 self.assertEqual(1, len(sequences)) |
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1472 |
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1473 # Test returning a non-main DICOM tag, |
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1474 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
|
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1475 # "MEDPC" in "ColorTestImageJ.dcm" |
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1476 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1477 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1478 self.assertEqual(1, len(tags)) |
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1479 |
|
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1480 |
|
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1481 def test_incoming_findscu_3(self): |
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1482 # This test fails if "LookupMode_DatabaseOnly" or |
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1483 # "LookupMode_DiskOnAnswer" is used, as |
|
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1484 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1485 # tag, as thus a constraint cannot be applied to it |
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1486 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1487 |
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1488 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1489 sequences = re.findall('\(0018,1010\)', i) |
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1490 self.assertEqual(1, len(sequences)) |
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1491 |
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1492 |
| 13 | 1493 def test_incoming_movescu(self): |
| 1494 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1495 |
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1496 # No matching patient, so no job is created |
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1497 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1498 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1499 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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1500 |
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1501 # 1 Matching patient, track the job |
| 138 | 1502 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1503 '--patient', | |
| 1504 '-k', '0008,0052=PATIENT', | |
| 1505 '-k', 'PatientID=12345678' | |
| 1506 ]))) | |
| 13 | 1507 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1508 | |
| 1509 | |
| 1510 def test_findscu(self): | |
| 1511 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1512 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1513 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1514 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1515 | |
| 1516 # Test the "find-patient" level | |
| 1517 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1518 self.assertEqual(1, len(p)) | |
| 1519 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1520 | |
| 1521 # Test wildcards constraints. The "LO" value representation | |
| 1522 # for PatientID is always case-sensitive, but the "PN" for | |
| 1523 # PatientName might depend on the implementation: | |
| 1524 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1525 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1526 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1527 self.assertEqual(1, len(p)) | |
| 1528 | |
| 1529 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1530 self.assertEqual(1, len(p)) | |
| 1531 | |
| 1532 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1533 self.assertEqual(1, len(p)) | |
| 1534 | |
| 1535 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1536 self.assertEqual(1, len(p)) | |
| 1537 | |
| 1538 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1539 self.assertEqual(0, len(p)) | |
| 1540 | |
| 1541 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1542 self.assertEqual(0, len(p)) | |
| 1543 | |
| 1544 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1545 self.assertEqual(0, len(p)) | |
| 1546 | |
| 1547 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1548 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1549 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1550 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1551 | |
| 1552 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1553 self.assertEqual(2, len(p)) | |
| 1554 | |
| 1555 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1556 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1557 self.assertEqual(1, len(s)) | |
| 1558 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1559 | |
| 1560 # Test range searches | |
| 1561 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1562 'StudyDate' : '-20070101' }) | |
| 1563 self.assertEqual(0, len(t)) | |
| 1564 | |
| 1565 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1566 'StudyDate' : '20090101-' }) | |
| 1567 self.assertEqual(0, len(t)) | |
| 1568 | |
| 1569 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1570 'StudyDate' : '20070101-' }) | |
| 1571 self.assertEqual(1, len(t)) | |
| 1572 | |
| 1573 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1574 'StudyDate' : '-20090101' }) | |
| 1575 self.assertEqual(1, len(t)) | |
| 1576 | |
| 1577 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1578 'StudyDate' : '20070207-20070207' }) | |
| 1579 self.assertEqual(0, len(t)) | |
| 1580 | |
| 1581 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1582 'StudyDate' : '20070208-20070208' }) | |
| 1583 self.assertEqual(1, len(t)) | |
| 1584 | |
| 1585 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1586 'StudyDate' : '20070209-20070209' }) | |
| 1587 self.assertEqual(0, len(t)) | |
| 1588 | |
| 1589 # Test the ModalitiesInStudy tag | |
| 1590 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1591 'PatientID' : 'B9uTHKOZ', | |
| 1592 'ModalitiesInStudy' : 'US' }) | |
| 1593 self.assertEqual(0, len(t)) | |
| 1594 | |
| 1595 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1596 'PatientID' : 'B9uTHKOZ', | |
| 1597 'ModalitiesInStudy' : 'CT' }) | |
| 1598 self.assertEqual(1, len(t)) | |
| 1599 | |
| 1600 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1601 'PatientID' : 'B9uTHKOZ', | |
| 1602 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1603 self.assertEqual(1, len(t)) | |
| 1604 | |
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1605 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1606 'PatientID' : 'B9uTHKOZ', |
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1607 'ModalitiesInStudy' : '' }) |
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1608 self.assertEqual(1, len(t)) |
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1609 |
| 13 | 1610 # Test the "find-series" level |
| 1611 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1612 'PatientID' : 'B9uTHKOZ', | |
| 1613 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1614 self.assertEqual(1, len(t)) | |
| 1615 | |
| 1616 # Test "\" separator | |
| 1617 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1618 'PatientID' : 'B9uTHKOZ', | |
| 1619 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1620 'Modality' : 'MR\\CT\\US' }) | |
| 1621 self.assertEqual(1, len(t)) | |
| 1622 | |
| 1623 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1624 'PatientID' : 'B9uTHKOZ', | |
| 1625 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1626 'Modality' : 'MR\\US' }) | |
| 1627 self.assertEqual(0, len(t)) | |
| 1628 | |
| 1629 | |
| 1630 def test_update_modalities(self): | |
| 1631 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1632 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1633 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1634 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1635 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1636 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
|
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1637 DoDelete(_REMOTE, '/modalities/tata') |
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1638 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1639 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
|
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1640 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1641 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1642 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1643 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1644 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1645 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1646 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1647 |
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1648 # New in Orthanc 1.8.1 |
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1649 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1650 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1651 |
| 13 | 1652 DoDelete(_REMOTE, '/modalities/toto') |
| 1653 DoDelete(_REMOTE, '/modalities/tata') | |
| 1654 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1655 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1656 | |
| 1657 | |
| 1658 def test_update_peers(self): | |
| 1659 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1660 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1661 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1662 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1663 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1664 'Username': 'user', | |
| 1665 'Password' : 'pass', | |
| 1666 'RemoteSelf' : 'self' }) | |
| 128 | 1667 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1668 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1669 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1670 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1671 |
| 1672 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1673 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1674 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1675 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1676 else: | |
| 1677 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1678 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1679 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1680 | |
| 128 | 1681 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1682 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1683 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1684 |
| 13 | 1685 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1686 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1687 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1688 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
|
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1689 |
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1690 # New in Orthanc 1.8.1 |
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1691 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1692 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1693 |
| 13 | 1694 DoDelete(_REMOTE, '/peers/toto') |
| 1695 DoDelete(_REMOTE, '/peers/tata') | |
| 1696 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1697 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1698 | |
| 1699 | |
| 1700 def test_mesterhazy_modification(self): | |
| 1701 # When I modify a series ( eg. curl | |
| 1702 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1703 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1704 # series is added to a new Study, instead of the existing | |
| 1705 # Study. Fixed in Orthanc 0.7.5 | |
| 1706 | |
| 1707 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1708 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1709 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1710 | |
| 1711 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1712 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1713 | |
| 1714 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1715 | |
| 1716 | |
| 1717 def test_create(self): | |
| 1718 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 1719 json.dumps({ | |
| 1720 'PatientName' : 'Jodogne', | |
| 1721 'Modality' : 'CT', | |
| 58 | 1722 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
| 13 | 1723 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
| 1724 })) | |
| 1725 | |
| 1726 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1727 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 1728 | |
| 1729 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1730 self.assertEqual((5, 5), png.size) | |
| 1731 | |
| 38 | 1732 j = DoGet(_REMOTE, i['Path']) |
| 1733 self.assertEqual('Instance', j['Type']) | |
| 1734 self.assertEqual(j['ID'], i['ID']) | |
| 1735 | |
| 13 | 1736 |
| 1737 def test_pilates(self): | |
| 1738 # "SCU failed error when accessing orthanc with osirix" by | |
| 1739 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1740 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1741 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1742 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1743 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1744 | |
| 1745 | |
| 1746 def test_shared_tags(self): | |
| 1747 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1748 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1749 p = DoGet(_REMOTE, '/patients')[0] | |
| 1750 | |
| 1751 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1752 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1753 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1754 |
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1755 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1756 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1757 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1758 |
| 13 | 1759 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1760 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1761 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1762 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1763 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1764 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1765 | |
| 1766 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1767 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1768 | |
| 1769 | |
| 1770 def test_modules(self): | |
| 1771 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1772 p = DoGet(_REMOTE, '/patients')[0] | |
| 1773 s = DoGet(_REMOTE, '/studies')[0] | |
| 1774 t = DoGet(_REMOTE, '/series')[0] | |
| 1775 | |
| 1776 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1777 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1778 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1779 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1780 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1781 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1782 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1783 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1784 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1785 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1786 | |
| 1787 | |
| 1788 def test_auto_directory(self): | |
| 1789 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1790 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1791 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1792 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1793 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1794 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1795 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1796 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1797 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1798 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1799 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1800 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1801 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1802 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1803 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1804 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1805 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 1806 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 1807 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 1808 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 1809 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 1810 |
| 1811 | |
| 1812 def test_echo(self): | |
| 1813 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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1814 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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1815 |
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1816 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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1817 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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1818 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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1819 |
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1820 # New in Orthanc 1.8.1 |
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1821 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 1822 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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1823 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 1824 |
| 353 | 1825 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 1826 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 1827 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 1828 'AET' : _REMOTE['DicomAet'], | |
| 1829 'Host' : _REMOTE['Server'], | |
| 1830 'Port' : _REMOTE['DicomPort'], | |
| 1831 'CheckFind' : True | |
| 1832 }) | |
| 1833 | |
| 13 | 1834 |
| 1835 def test_xml(self): | |
| 1836 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 1837 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 1838 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 1839 self.assertEqual(len(items), len(json)) | |
| 1840 | |
| 1841 self.assertTrue('dicom-conformance' in json) | |
| 1842 | |
| 1843 ok = False | |
| 1844 for i in items: | |
| 1845 if i.childNodes[0].data == 'dicom-conformance': | |
| 1846 ok = True | |
| 1847 self.assertTrue(ok) | |
| 1848 | |
| 1849 | |
|
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1850 def test_googlecode_issue_16(self): |
| 13 | 1851 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 1852 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 1853 self.assertEqual('0018,1063', t) | |
| 1854 | |
| 1855 | |
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1856 def test_googlecode_issue_22(self): |
| 13 | 1857 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 1858 a = [ | |
| 1859 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 1860 "c69eee9a51eea3e8611e82e578897254", | |
| 1861 "315666be83e2d0111c77bc0996d84901", | |
| 1862 "3e27aa959d911172c48a1436443c72b1", | |
| 1863 "958642c9e7e9d232d3869faff546058c", | |
| 1864 "5e7ea8e3e4230cae707d143481355c59", | |
| 1865 "eda37f83558d858a596175aed8b2ad47", | |
| 1866 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 1867 "091ef729eb169e67da8a0faa9631f9a8", | |
| 1868 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 1869 "e2f39e85896fe58876654b94cd0b5013", | |
| 1870 "6fd2129e4950abbe1be053bc814d5da8", | |
| 1871 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 1872 "746f808582156734dd6b6fdfd3a0b72c", | |
| 1873 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 1874 "806b8b3e300c615099c11a5ec23465aa", | |
| 1875 "7c836aa298ba6eef96434579af631a11", | |
| 1876 "a0357dc9f4f72d73a885c33d7c287446", | |
| 1877 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 1878 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 1879 "44e6670f127e612a2b4aa60a0d207698", | |
| 1880 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 1881 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 1882 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 1883 ] | |
| 1884 | |
| 1885 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 1886 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 1887 | |
| 1888 for i in range(len(a)): | |
| 1889 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 1890 | |
| 1891 | |
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1892 def test_googlecode_issue_19(self): |
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1893 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 1894 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 1895 | |
| 1896 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 1897 if not HasGdcmPlugin(_REMOTE): |
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1898 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 1899 |
| 1900 | |
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1901 def test_googlecode_issue_37(self): |
| 13 | 1902 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 1903 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 1904 | |
| 1905 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1906 'CaseSensitive' : True, | |
| 1907 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 1908 self.assertEqual(1, len(a)) | |
| 14 | 1909 |
| 1910 | |
| 1911 def test_rest_find(self): | |
| 1912 # Upload 8 instances | |
| 1913 for i in range(2): | |
| 1914 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1915 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1916 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1917 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1918 | |
| 1919 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1920 'CaseSensitive' : False, | |
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1921 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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1922 self.assertEqual(1, len(a)) |
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1923 |
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1924 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1925 'CaseSensitive' : False, |
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1926 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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1927 self.assertEqual(2, len(a)) |
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1928 |
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1929 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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1930 'CaseSensitive' : False, |
| 14 | 1931 'Query' : { 'PatientName' : '*n*' }}) |
| 1932 self.assertEqual(2, len(a)) | |
| 1933 | |
| 1934 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1935 'CaseSensitive' : True, | |
| 1936 'Query' : { 'PatientName' : '*n*' }}) | |
| 1937 self.assertEqual(0, len(a)) | |
| 1938 | |
| 1939 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 1940 'Level' : 'Patient', | |
| 1941 'CaseSensitive' : False, | |
| 1942 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1943 self.assertEqual(1, len(a)) | |
| 1944 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 1945 | |
| 1946 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 1947 'CaseSensitive' : True, | |
| 1948 'Query' : { 'PatientName' : '*ne*' }}) | |
| 1949 self.assertEqual(0, len(a)) | |
| 1950 | |
| 1951 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 1952 'CaseSensitive' : True, | |
| 1953 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1954 self.assertEqual(1, len(a)) | |
| 1955 | |
| 1956 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 1957 'CaseSensitive' : True, | |
| 1958 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1959 self.assertEqual(2, len(a)) | |
| 1960 | |
| 1961 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 1962 'CaseSensitive' : True, | |
| 1963 'Query' : { 'PatientName' : '*NE*' }}) | |
| 1964 self.assertEqual(4, len(a)) | |
| 1965 | |
| 1966 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 1967 self.assertEqual(2, len(a)) | |
| 1968 | |
| 1969 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 1970 self.assertEqual(2, len(a)) | |
| 1971 | |
| 1972 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 1973 self.assertEqual(4, len(a)) | |
| 1974 | |
| 1975 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 1976 self.assertEqual(8, len(a)) | |
| 1977 | |
|
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1978 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1979 'Expand' : True, |
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1980 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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1981 self.assertEqual(1, len(a)) |
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1982 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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1983 |
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1984 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1985 'Expand' : True, |
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1986 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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1987 self.assertEqual(2, len(a)) |
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1988 for i in range(2): |
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1989 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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1990 |
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1991 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1992 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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1993 self.assertEqual(0, len(a)) |
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1994 |
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1995 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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1996 'Expand' : True, |
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1997 'Query' : { 'StudyDate' : '-20061201' }}) |
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1998 self.assertEqual(1, len(a)) |
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1999 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2000 |
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2001 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2002 'Expand' : True, |
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2003 'Query' : { 'StudyDate' : '-20051201' }}) |
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2004 self.assertEqual(0, len(a)) |
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2005 |
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2006 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2007 'Expand' : True, |
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2008 'Query' : { 'StudyDate' : '20061201-' }}) |
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2009 self.assertEqual(2, len(a)) |
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2010 for i in range(2): |
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2011 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2012 |
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2013 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2014 'Expand' : True, |
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2015 'Query' : { 'StudyDate' : '20061202-' }}) |
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2016 self.assertEqual(1, len(a)) |
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2017 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2018 |
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2019 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2020 'Expand' : True, |
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2021 'Query' : { 'StudyDate' : '20080819-' }}) |
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2022 self.assertEqual(1, len(a)) |
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2023 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2024 |
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2025 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2026 'Expand' : True, |
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2027 'Query' : { 'StudyDate' : '20080820-' }}) |
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2028 self.assertEqual(0, len(a)) |
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2029 |
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2030 |
| 14 | 2031 |
| 2032 def test_rest_query_retrieve(self): | |
| 2033 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2034 | |
| 2035 # Upload 8 instances | |
| 2036 for i in range(2): | |
| 2037 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2038 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2039 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2040 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2041 | |
| 2042 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2043 for p in DoGet(_REMOTE, '/patients'): | |
| 2044 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2045 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2046 | |
| 2047 for q in DoGet(_REMOTE, '/queries'): | |
| 2048 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2049 | |
| 2050 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2051 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2052 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
| 27 | 2053 'Query' : { |
| 2054 'PatientName' : '*NE*', | |
| 2055 'StudyDate' : '*', | |
| 2056 }})['ID'] | |
| 14 | 2057 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
| 2058 | |
| 2059 b = DoGet(_REMOTE, '/queries/%s' % a) | |
| 2060 self.assertTrue('answers' in b) | |
| 2061 self.assertTrue('level' in b) | |
| 2062 self.assertTrue('modality' in b) | |
| 2063 self.assertTrue('query' in b) | |
| 2064 self.assertTrue('retrieve' in b) | |
| 2065 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
| 2066 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
| 2067 | |
| 2068 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
| 27 | 2069 self.assertEqual(2, len(q)) |
| 14 | 2070 self.assertTrue('PatientName' in q) |
| 27 | 2071 self.assertTrue('StudyDate' in q) |
| 14 | 2072 self.assertEqual('*NE*', q['PatientName']) |
| 27 | 2073 self.assertEqual('*', q['StudyDate']) |
| 14 | 2074 |
| 2075 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 2076 | |
| 2077 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
| 2078 self.assertTrue('content' in s) | |
| 2079 self.assertTrue('retrieve' in s) | |
| 2080 | |
| 2081 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
| 2082 self.assertEqual('887', s['PatientID']) | |
| 2083 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
| 2084 | |
| 2085 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2086 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
| 2087 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 2088 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2089 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 2090 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 2091 | |
| 112 | 2092 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
| 14 | 2093 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 2094 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 2095 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2096 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 2097 | |
|
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2098 # New in Orthanc 1.4.3 |
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2099 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2100 self.assertEqual(2, len(s)) |
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2101 for i in range(2): |
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2102 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2103 self.assertEqual('887', s[i]['PatientID']) |
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2104 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2105 |
| 14 | 2106 DoDelete(_REMOTE, '/queries/%s' % a) |
| 2107 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
| 2108 | |
| 2109 | |
| 2110 def test_parent(self): | |
| 2111 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2112 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2113 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2114 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2115 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2116 self.assertEqual(instance, u) |
| 14 | 2117 |
| 2118 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2119 self.assertEqual('Patient', a['Type']) | |
| 2120 self.assertEqual(patient, a['ID']) | |
| 2121 | |
| 2122 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2123 self.assertEqual('Patient', a['Type']) | |
| 2124 self.assertEqual(patient, a['ID']) | |
| 2125 | |
| 2126 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2127 self.assertEqual('Study', a['Type']) | |
| 2128 self.assertEqual(study, a['ID']) | |
| 2129 | |
| 2130 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2131 self.assertEqual('Patient', a['Type']) | |
| 2132 self.assertEqual(patient, a['ID']) | |
| 2133 | |
| 2134 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2135 self.assertEqual('Study', a['Type']) | |
| 2136 self.assertEqual(study, a['ID']) | |
| 2137 | |
| 2138 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2139 self.assertEqual('Series', a['Type']) | |
| 2140 self.assertEqual(series, a['ID']) | |
| 2141 | |
| 2142 | |
| 2143 def test_shanon(self): | |
| 2144 def Anonymize(instance, replacements = {}): | |
| 119 | 2145 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2146 'Replace' : replacements, | |
| 2147 'Force' : True, | |
| 2148 }, 'application/json') | |
| 14 | 2149 |
| 2150 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2151 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2152 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2153 | |
| 2154 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2155 ids = [ 'ozp00SjY2xG', | |
| 2156 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2157 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2158 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2159 | |
| 2160 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2161 for i in range(4): | |
| 2162 self.assertNotEqual(ids[i], a[i]) | |
| 2163 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2164 | |
| 2165 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2166 for i in range(4): | |
| 2167 self.assertNotEqual(ids[i], a[i]) | |
| 2168 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2169 | |
| 2170 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2171 self.assertEqual('instance', a[3]) | |
| 2172 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2173 | |
| 2174 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2175 self.assertEqual('series', a[2]) | |
| 2176 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2177 | |
| 2178 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2179 self.assertEqual('study', a[1]) | |
| 2180 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2181 | |
| 2182 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2183 self.assertEqual('patient', a[0]) | |
| 2184 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2185 | |
| 2186 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2187 'StudyInstanceUID' : 'study', | |
| 2188 'SeriesInstanceUID' : 'series', | |
| 2189 'SOPInstanceUID' : 'instance' }), tags) | |
| 2190 self.assertEqual('patient', a[0]) | |
| 2191 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2192 | |
| 2193 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2194 | |
| 2195 | |
| 2196 def test_shanon_2(self): | |
| 2197 def Modify(instance, replacements = {}): | |
| 119 | 2198 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2199 'Replace' : replacements, | |
| 2200 'Force': True, | |
| 2201 }, 'application/json') | |
| 14 | 2202 |
| 2203 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2204 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2205 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2206 | |
| 2207 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2208 ids = [ 'ozp00SjY2xG', | |
| 2209 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2210 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2211 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2212 | |
| 2213 a = ExtractDicomTags(Modify(u), tags) | |
| 2214 self.assertEqual(ids[0], a[0]) | |
| 2215 self.assertEqual(ids[1], a[1]) | |
| 2216 self.assertEqual(ids[2], a[2]) | |
| 2217 self.assertNotEqual(ids[3], a[3]) | |
| 2218 self.assertEqual(0, len(a[4])) | |
| 2219 | |
| 2220 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2221 self.assertEqual(ids[0], a[0]) | |
| 2222 self.assertEqual(ids[1], a[1]) | |
| 2223 self.assertEqual(ids[2], a[2]) | |
| 2224 self.assertEqual('instance', a[3]) | |
| 2225 | |
| 2226 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2227 self.assertEqual(ids[0], a[0]) | |
| 2228 self.assertEqual(ids[1], a[1]) | |
| 2229 self.assertEqual('series', a[2]) | |
| 2230 self.assertNotEqual(ids[3], a[3]) | |
| 2231 | |
| 2232 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2233 self.assertEqual(ids[0], a[0]) | |
| 2234 self.assertEqual('study', a[1]) | |
| 2235 self.assertNotEqual(ids[2], a[2]) | |
| 2236 self.assertNotEqual(ids[3], a[3]) | |
| 2237 | |
| 2238 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2239 self.assertEqual('patient', a[0]) | |
| 2240 self.assertNotEqual(ids[1], a[1]) | |
| 2241 self.assertNotEqual(ids[2], a[2]) | |
| 2242 self.assertNotEqual(ids[3], a[3]) | |
| 2243 | |
| 2244 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2245 'StudyInstanceUID' : 'study', | |
| 2246 'SeriesInstanceUID' : 'series', | |
| 2247 'SOPInstanceUID' : 'instance' }), tags) | |
| 2248 self.assertEqual('patient', a[0]) | |
| 2249 self.assertEqual('study', a[1]) | |
| 2250 self.assertEqual('series', a[2]) | |
| 2251 self.assertEqual('instance', a[3]) | |
| 2252 | |
| 2253 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2254 | |
| 2255 | |
| 2256 def test_instances_tags(self): | |
| 2257 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2258 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2259 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2260 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2261 | |
| 2262 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2263 self.assertEqual(2, len(i)) | |
| 2264 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2265 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2266 | |
| 2267 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2268 self.assertEqual(2, len(i)) | |
| 2269 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2270 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2271 | |
| 2272 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2273 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2274 self.assertEqual(1, len(i)) | |
| 2275 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2276 | |
| 2277 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2278 self.assertEqual(1, len(i)) | |
| 2279 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2280 | |
|
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2281 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2282 self.assertEqual(1, len(i)) |
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2283 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2284 |
| 14 | 2285 |
| 2286 def test_lookup(self): | |
| 2287 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2288 self.assertEqual(0, len(a)) | |
| 2289 | |
| 2290 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2291 | |
| 2292 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2293 self.assertEqual(1, len(a)) | |
| 2294 self.assertEqual('Patient', a[0]['Type']) | |
| 2295 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2296 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2297 | |
| 2298 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2299 self.assertEqual(1, len(a)) | |
| 2300 self.assertEqual('Study', a[0]['Type']) | |
| 2301 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2302 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2303 | |
| 2304 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2305 self.assertEqual(1, len(a)) | |
| 2306 self.assertEqual('Series', a[0]['Type']) | |
| 2307 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2308 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2309 | |
| 2310 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2311 self.assertEqual(1, len(a)) | |
| 2312 self.assertEqual('Instance', a[0]['Type']) | |
| 2313 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2314 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2315 | |
| 2316 DropOrthanc(_REMOTE) | |
| 2317 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2318 self.assertEqual(0, len(a)) | |
| 2319 | |
| 15 | 2320 |
| 2321 def test_autorouting(self): | |
| 2322 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2323 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2324 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2325 | |
| 2326 # Check that this version is >= 0.8.0 | |
| 2327 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2328 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2329 | |
| 2330 UploadInstance(_REMOTE, knee1) | |
| 2331 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2332 | |
| 2333 DropOrthanc(_REMOTE) | |
| 2334 DropOrthanc(_LOCAL) | |
| 174 | 2335 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2336 UploadInstance(_REMOTE, knee1) |
| 2337 UploadInstance(_REMOTE, knee2) | |
| 2338 UploadInstance(_REMOTE, other) | |
| 2339 WaitEmpty(_REMOTE) | |
| 174 | 2340 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2341 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2342 | |
| 2343 DropOrthanc(_REMOTE) | |
| 2344 DropOrthanc(_LOCAL) | |
| 174 | 2345 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2346 UploadInstance(_REMOTE, knee1) |
| 2347 UploadInstance(_REMOTE, knee2) | |
| 2348 UploadInstance(_REMOTE, other) | |
| 2349 WaitEmpty(_REMOTE) | |
| 174 | 2350 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2351 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2352 | |
| 2353 DropOrthanc(_REMOTE) | |
| 2354 DropOrthanc(_LOCAL) | |
| 174 | 2355 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2356 UploadInstance(_REMOTE, knee1) |
| 2357 WaitEmpty(_REMOTE) | |
| 174 | 2358 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2359 i = DoGet(_LOCAL, '/instances') |
| 2360 self.assertEqual(1, len(i)) | |
| 2361 | |
| 2362 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2363 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2364 f.flush() | |
| 45 | 2365 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2366 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2367 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2368 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2369 |
| 2370 | |
| 2371 def test_storescu_rf(self): | |
| 2372 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2373 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2374 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2375 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2376 |
| 2377 | |
| 2378 def test_anonymize_instance(self): | |
| 2379 def AnonymizeAndUpload(instanceId, parameters): | |
| 2380 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2381 'application/json'), 'application/dicom')['ID'] | |
| 2382 | |
| 2383 def ModifyAndUpload(instanceId, parameters): | |
| 2384 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2385 'application/json'), 'application/dicom')['ID'] | |
| 2386 | |
| 2387 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2388 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2389 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2390 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2391 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2392 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2393 | |
| 2394 b = AnonymizeAndUpload(a, '{}') | |
| 2395 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2396 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2397 | |
| 2398 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2399 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2400 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2401 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2402 | |
| 2403 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2404 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2405 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2406 | |
| 2407 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2408 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2409 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2410 | |
| 2411 # Examples from the Wiki | |
|
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|
2412 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2413 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2414 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2415 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2416 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2417 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2418 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2419 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2420 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2421 | |
|
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|
2422 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2423 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2424 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2425 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2426 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2427 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2428 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2429 | |
|
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|
2430 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2431 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2432 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2433 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2434 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2435 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2436 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2437 | |
| 2438 | |
| 2439 # Test modify non-existing | |
| 2440 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2441 json.dumps({ | |
| 2442 'PatientName' : 'Jodogne', | |
| 2443 'Modality' : 'CT', | |
| 2444 }))['ID'] | |
| 2445 | |
| 2446 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2447 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2448 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2449 | |
| 2450 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2451 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2452 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2453 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2454 | |
|
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2455 |
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2456 def test_incoming_jpeg(self): |
|
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|
2457 def storescu(image, acceptUnknownSopClassUid): |
|
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2458 if acceptUnknownSopClassUid: |
|
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2459 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2460 else: |
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|
2461 tmp = [ '-xs' ] |
|
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|
2462 |
|
21
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|
2463 with open(os.devnull, 'w') as FNULL: |
|
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|
2464 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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|
2465 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
967d44407308
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|
2466 GetDatabasePath(image) ], |
|
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|
2467 stderr = FNULL) |
|
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|
2468 |
|
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|
2469 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2470 |
|
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2471 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
|
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2472 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
|
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|
2473 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
|
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|
2474 ]) |
|
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|
2475 self.assertTrue('1.2.840.10008.1.2' in a) |
|
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|
2476 self.assertTrue('1.2.840.10008.1.2.1' in a) |
|
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|
2477 self.assertTrue('1.2.840.10008.1.2.2' in a) |
|
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|
2478 self.assertEqual(3, len(a)) |
|
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2479 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
|
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|
2480 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
|
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2481 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
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|
2482 else: |
|
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|
2483 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
|
f673153f27a4
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|
2484 |
|
61
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|
2485 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False)) |
|
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diff
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|
2486 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True)) |
|
21
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|
2487 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2488 |
|
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|
2489 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2490 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
373
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changeset
|
2491 self.assertGreaterEqual(42, len(a)) |
|
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|
2492 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
|
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|
2493 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
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|
2494 else: |
|
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|
2495 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
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2496 |
|
62
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diff
changeset
|
2497 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
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|
2498 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
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|
2499 storescu('UnknownSopClassUid.dcm', True) |
|
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|
2500 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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|
2501 |
|
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diff
changeset
|
2502 |
|
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diff
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|
2503 def test_storescu_jpeg(self): |
|
2a29bcff60a7
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|
2504 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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|
2505 |
|
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diff
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|
2506 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2507 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2508 | |
| 2509 # This is JPEG lossless | |
|
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|
2510 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2511 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
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|
2512 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2513 |
|
21
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|
2514 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
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|
2515 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
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|
2516 |
|
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|
2517 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
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|
2518 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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|
2519 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
2520 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
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|
2521 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
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|
2522 |
|
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|
2523 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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|
2524 |
|
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changeset
|
2525 DropOrthanc(_REMOTE) |
|
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changeset
|
2526 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
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|
2527 |
|
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|
2528 |
|
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|
2529 def test_pixel_data(self): |
|
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|
2530 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
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|
2531 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
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|
2532 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
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|
2533 |
|
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changeset
|
2534 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2535 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2536 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2537 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2538 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2539 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2540 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2541 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2542 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2543 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2544 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2545 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2546 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2547 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2548 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2549 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2550 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2551 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2552 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2553 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2554 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2555 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2556 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2557 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2558 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2559 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2560 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2561 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2562 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2563 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2564 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2565 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2566 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2567 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2568 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2569 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2570 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2571 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2572 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2573 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2574 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2575 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2576 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2577 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2578 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2579 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2580 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2581 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2582 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2583 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2584 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2585 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2586 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2587 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2588 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2589 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2590 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2591 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2592 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2593 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2594 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2595 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2596 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2597 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2598 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2599 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2600 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2601 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2602 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2603 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2604 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2605 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2606 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2607 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2608 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2609 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2610 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2611 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2612 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2613 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2614 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2615 # Test the last frame |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2616 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2617 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2618 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2619 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2620 def test_decode_signed(self): |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2621 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2622 minValue = -2000 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2623 maxValue = 4042 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2624 |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2625 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2626 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2627 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2628 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2629 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2630 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
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18
diff
changeset
|
2631 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2632 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2633 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2634 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2635 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2636 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2637 |
|
2a29bcff60a7
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parents:
18
diff
changeset
|
2638 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2639 |
| 2640 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2641 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2642 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2643 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2644 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2645 |
| 22 | 2646 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2647 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2648 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2649 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2650 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2651 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2652 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2653 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2654 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2655 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2656 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2657 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2658 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2659 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2660 |
| 22 | 2661 def test_encodings(self): |
| 23 | 2662 # Latin-1 (ISO_IR 100) |
| 22 | 2663 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2664 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2665 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2666 |
| 2667 # Latin-2 (ISO_IR 101) | |
| 2668 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2669 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2670 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2671 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2672 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2673 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2674 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2675 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2676 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2677 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2678 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2679 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2680 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2681 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2682 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2683 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2684 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2685 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2686 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2687 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2688 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2689 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2690 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2691 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2692 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2693 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2694 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2695 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2696 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2697 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2698 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2699 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2700 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2701 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2702 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2703 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2704 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2705 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2706 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2707 |
| 174 | 2708 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2709 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2710 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2711 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2712 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2713 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2714 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2715 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2716 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2717 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2718 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2719 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2720 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2721 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2722 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2723 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2724 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2725 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2726 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2727 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2728 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2729 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2730 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2731 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2732 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2733 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2734 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2735 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2736 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2737 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2738 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2739 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2740 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2741 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2742 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2743 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2744 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2745 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2746 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2747 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2748 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2749 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2750 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2751 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2752 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2753 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2754 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2755 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2756 s = {} |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2757 since = 0 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2758 while True: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2759 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2760 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2761 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2762 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2763 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2764 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2765 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2766 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2767 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2768 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2769 self.assertTrue(instance in s) |
| 36 | 2770 |
| 2771 | |
| 2772 def test_create_pdf(self): | |
| 2773 # Upload 4 instances | |
| 2774 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 2775 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 2776 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 2777 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 2778 | |
| 2779 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 2780 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 2781 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 2782 | |
| 2783 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 2784 pdf = f.read() | |
| 2785 | |
| 2786 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2787 json.dumps({ | |
| 2788 'Tags' : { | |
| 2789 'PatientName' : 'Jodogne', | |
| 2790 'Modality' : 'CT', | |
| 2791 }, | |
| 2792 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2793 })) | |
| 2794 | |
| 2795 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
446
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2796 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2797 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
2798 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 2799 |
| 2800 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 2801 self.assertEqual(len(b), len(pdf) + 1) | |
| 2802 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 2803 | |
| 2804 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 2805 json.dumps({ | |
| 2806 'Parent' : brainixPatient, | |
| 2807 'Tags' : { | |
| 2808 'PatientName' : 'Jodogne', | |
| 2809 } | |
| 2810 }))) | |
| 2811 | |
| 2812 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2813 json.dumps({ | |
| 2814 'Parent' : brainixPatient, | |
| 2815 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 2816 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2817 })) | |
| 2818 | |
| 2819 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
| 2820 | |
| 2821 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2822 json.dumps({ | |
| 2823 'Parent' : brainixStudy, | |
| 2824 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 2825 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 2826 })) | |
| 2827 | |
| 2828 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 2829 | |
| 2830 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2831 json.dumps({ | |
| 2832 'Parent' : brainixEpi, | |
| 37 | 2833 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 2834 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 2835 })) | |
| 2836 | |
| 2837 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 2838 | |
| 2839 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 2840 self.assertEqual(len(b), len(pdf)) | |
| 2841 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 2842 | |
| 2843 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 2844 |
| 2845 | |
| 2846 def test_create_series(self): | |
| 2847 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2848 json.dumps({ | |
| 2849 'Tags' : { | |
| 40 | 2850 'SpecificCharacterSet' : 'ISO_IR 100', |
| 2851 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 2852 'Modality' : 'CT', |
| 2853 }, | |
| 2854 'Content' : [ | |
| 40 | 2855 { |
| 2856 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 2857 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 2858 }, | |
| 38 | 2859 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 2860 ] | |
| 2861 })) | |
| 2862 | |
| 2863 s = DoGet(_REMOTE, i['Path']) | |
| 2864 self.assertEqual('Series', s['Type']) | |
| 2865 self.assertEqual(s['ID'], i['ID']) | |
| 2866 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 2867 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 2868 self.assertEqual('Complete', s['Status']) | |
| 40 | 2869 |
| 2870 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 2871 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 2872 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 2873 if 'ImageComments' in a: | |
| 2874 self.assertEqual('Tutu', a['ImageComments']) | |
| 2875 else: | |
| 2876 self.assertEqual('Tutu', b['ImageComments']) | |
| 2877 | |
| 2878 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 2879 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 2880 'Sébastien Jodogne') | |
| 47 | 2881 |
| 2882 | |
| 2883 def test_create_binary(self): | |
| 2884 binary = ''.join(map(chr, range(256))) | |
| 2885 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 2886 tags = { | |
| 2887 'PatientName' : 'Jodogne', | |
| 2888 '8899-8899' : encoded | |
| 2889 } | |
| 2890 | |
| 2891 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2892 json.dumps({ | |
| 266 | 2893 'Tags' : tags, |
| 2894 'PrivateCreator' : 'TestBinary', | |
| 47 | 2895 })) |
| 2896 | |
| 2897 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2898 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 2899 | |
| 2900 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2901 json.dumps({ | |
| 2902 'InterpretBinaryTags' : False, | |
| 266 | 2903 'Tags' : tags, |
| 2904 'PrivateCreator' : 'TestBinary', | |
| 47 | 2905 })) |
| 2906 | |
| 2907 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 2908 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2909 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2910 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2911 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2912 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2913 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2914 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2915 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2916 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2917 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2918 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2919 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2920 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2921 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2922 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2923 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2924 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2925 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2926 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2927 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2928 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2929 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2930 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2931 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2932 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2933 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2934 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2935 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2936 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2937 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2938 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2939 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2940 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2941 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2942 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2943 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2944 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2945 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2946 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2947 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2948 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2949 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2950 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2951 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2952 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2953 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2954 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2955 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2956 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2957 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2958 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2959 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2960 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2961 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2962 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2963 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2964 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2965 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2966 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2967 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2968 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2969 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2970 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2971 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2972 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2973 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2974 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2975 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2976 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2977 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2978 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2979 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2980 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2981 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2982 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2983 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2984 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2985 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2986 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2987 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2988 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2989 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2990 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2991 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2992 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2993 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2994 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2995 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2996 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2997 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2998 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2999 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3000 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3001 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3002 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3003 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3004 }), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3005 'application/json') |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3006 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3007 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3008 |
| 52 | 3009 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3010 | |
| 3011 | |
| 3012 def test_compression(self): | |
| 3013 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3014 | |
|
380
b9adc7d06347
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parents:
379
diff
changeset
|
3015 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3016 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
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parents:
379
diff
changeset
|
3017 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3018 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3019 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3020 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3021 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3022 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3023 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3024 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3025 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3026 |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3027 # If "StorageCompression" is enabled in the Orthanc to be |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3028 # tested, uncompress the attachment before running the test |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3029 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3030 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3031 |
|
380
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3032 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3033 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
3034 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3035 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3036 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
b9adc7d06347
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diff
changeset
|
3037 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3038 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
b9adc7d06347
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diff
changeset
|
3039 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3040 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3041 self.assertTrue('compress' in ops) |
| 3042 self.assertTrue('uncompress' in ops) | |
| 3043 self.assertTrue('is-compressed' in ops) | |
|
380
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3044 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
b9adc7d06347
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3045 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
b9adc7d06347
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diff
changeset
|
3046 |
|
b9adc7d06347
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diff
changeset
|
3047 # Re-compress the attachment |
|
b9adc7d06347
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diff
changeset
|
3048 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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diff
changeset
|
3049 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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diff
changeset
|
3050 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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diff
changeset
|
3051 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3052 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
3053 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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changeset
|
3054 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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diff
changeset
|
3055 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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changeset
|
3056 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
|
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changeset
|
3057 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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3058 |
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|
3059 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
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|
3060 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
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|
3061 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
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|
3062 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
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3063 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
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3064 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
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3065 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3066 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
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|
3067 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3068 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3069 |
| 3070 | |
| 3071 def test_ordered_slices(self): | |
| 3072 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3073 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3074 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3075 self.assertEqual('Sequence', o['Type']) | |
| 3076 self.assertEqual(1, len(o['Dicom'])) | |
| 3077 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3078 self.assertEqual(76, len(o['Slices'])) | |
| 3079 for j in range(76): | |
| 3080 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3081 | |
| 68 | 3082 self.assertEqual(1, len(o['SlicesShort'])) |
| 3083 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3084 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3085 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3086 | |
| 53 | 3087 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3088 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3089 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3090 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3091 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3092 | |
| 3093 self.assertEqual('Volume', o['Type']) | |
| 3094 self.assertEqual(3, len(o['Dicom'])) | |
| 3095 self.assertEqual(3, len(o['Slices'])) | |
| 3096 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3097 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3098 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3099 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3100 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3101 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3102 | |
| 68 | 3103 self.assertEqual(3, len(o['SlicesShort'])) |
| 3104 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3105 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3106 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3107 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3108 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3109 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3110 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3111 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3112 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3113 | |
| 53 | 3114 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3115 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3116 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3117 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3118 | |
| 3119 self.assertEqual('Sequence', o['Type']) | |
| 3120 self.assertEqual(2, len(o['Dicom'])) | |
| 3121 self.assertEqual(2, len(o['Slices'])) | |
| 3122 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3123 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3124 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3125 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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diff
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|
3126 |
| 68 | 3127 self.assertEqual(2, len(o['SlicesShort'])) |
| 3128 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3129 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3130 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3131 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3132 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3133 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3134 | |
| 3135 | |
|
54
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|
3136 |
|
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test_incoming_movescu_accession
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diff
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|
3137 def test_incoming_movescu_accession(self): |
|
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test_incoming_movescu_accession
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diff
changeset
|
3138 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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3139 |
|
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3140 # No matching patient, so no job is created |
|
54
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3141 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3142 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
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diff
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|
3143 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3144 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
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|
3145 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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3146 |
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|
3147 # 1 Matching patient, track the job |
| 138 | 3148 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3149 '--study', | |
| 3150 '-k', '0008,0052=STUDY', | |
| 3151 '-k', 'AccessionNumber=A10003245599' | |
| 3152 ]))) | |
|
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3153 |
|
54
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|
3154 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3155 |
| 55 | 3156 |
| 3157 def test_dicom_to_json(self): | |
| 3158 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
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|
3159 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
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|
3160 |
|
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|
3161 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
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|
3162 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
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|
3163 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3164 # Tags for compatibility with DCMTK 3.6.0 |
| 3165 'RETIRED_OtherPatientIDs', | |
| 3166 'OtherPatientIDs', | |
| 3167 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
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|
3168 ])) |
| 55 | 3169 |
| 3170 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3171 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
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test_reconstruct_json2 + test_private_tags
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diff
changeset
|
3172 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
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|
3173 ])) |
| 55 | 3174 |
|
60
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changeset
|
3175 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
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changeset
|
3176 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
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|
3177 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
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|
3178 ])) |
|
60
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|
3179 |
|
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|
3180 |
|
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|
3181 # NB: To get the actual value of the "tags" JSON file, use the |
|
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|
3182 # following command: |
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|
3183 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
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|
3184 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
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changeset
|
3185 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
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|
3186 a = json.loads(f.read()) |
|
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3187 |
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|
3188 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
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|
3189 # reports are truncated starting with PixelData |
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|
3190 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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|
3191 self.assertFalse('7fe1,0010' in t) |
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|
3192 self.assertFalse('7fe1,1001' in t) |
|
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|
3193 del a['7fe1,0010'] |
|
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|
3194 del a['7fe1,1001'] |
|
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|
3195 else: |
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|
3196 self.assertTrue('7fe1,0010' in t) |
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|
3197 self.assertTrue('7fe1,1001' in t) |
|
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|
3198 |
|
65
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changeset
|
3199 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
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|
3200 tt = (json.dumps(t) |
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|
3201 .replace('2e+022', '2e+22') |
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|
3202 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
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|
3203 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
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|
3204 self.assertEqual(aa, tt) |
| 57 | 3205 |
| 3206 | |
| 3207 def test_batch_archive(self): | |
| 3208 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3209 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3210 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3211 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3212 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3213 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3214 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3215 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3216 | |
| 3217 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3218 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3219 self.assertEqual(0, len(z.namelist())) | |
| 3220 | |
| 3221 # One patient | |
| 3222 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3223 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3224 self.assertEqual(4, len(z.namelist())) | |
| 3225 | |
| 3226 # One patient + twice its study + one series from other patient | |
| 3227 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3228 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3229 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3230 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3231 ]) | |
| 3232 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3233 self.assertEqual(6, len(z.namelist())) | |
| 3234 | |
| 3235 # One patient + one series + one instance | |
| 3236 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3237 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3238 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3239 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3240 ]) | |
| 3241 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3242 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3243 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3244 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3245 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3246 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3247 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3248 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3249 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3250 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3251 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3252 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3253 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3254 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3255 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3256 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3257 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3258 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3259 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3260 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3261 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3262 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3263 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3264 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3265 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3266 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3267 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3268 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3269 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3270 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3271 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3272 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3273 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3274 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3275 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3276 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3277 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3278 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3279 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3280 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3281 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3282 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3283 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3284 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3285 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3286 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3287 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3288 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3289 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3290 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3291 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3292 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3293 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3294 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3295 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3296 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3297 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3298 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3299 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3300 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3301 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3302 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3303 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3304 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3305 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3306 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3307 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3308 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3309 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3310 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3311 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3312 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3313 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3314 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3315 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3316 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3317 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3318 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3319 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3320 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3321 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3322 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3323 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3324 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3325 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3326 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3327 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3328 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3329 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3330 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3331 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3332 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3333 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3334 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3335 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3336 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3337 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3338 self.assertTrue('3 ' in s) |
|
48740070cbf1
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3339 |
|
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|
3340 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
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|
3341 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
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|
3342 self.assertEqual(1, len(s)) |
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|
3343 self.assertTrue('2 ' in s) |
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|
3344 |
|
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|
3345 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
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|
3346 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
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|
3347 self.assertEqual(1, len(s)) |
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|
3348 self.assertTrue('3 ' in s) |
|
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|
3349 |
|
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diff
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|
3350 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
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|
3351 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
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|
3352 self.assertEqual(2, len(s)) |
|
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diff
changeset
|
3353 self.assertTrue('1 ' in s) |
|
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|
3354 self.assertTrue('2 ' in s) |
|
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parents:
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diff
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|
3355 |
|
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diff
changeset
|
3356 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
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|
3357 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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|
3358 self.assertEqual(1, len(s)) |
|
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diff
changeset
|
3359 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
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diff
changeset
|
3360 self.assertTrue('PT' in t) |
|
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diff
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|
3361 self.assertTrue('CT' in t) |
|
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|
3362 |
|
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diff
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|
3363 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
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|
3364 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
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|
3365 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
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diff
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|
3366 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
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|
3367 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
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|
3368 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
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|
3369 |
|
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diff
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|
3370 |
|
78
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diff
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|
3371 def test_decode_transfer_syntax(self): |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
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diff
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|
3372 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
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diff
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|
3373 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
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diff
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|
3374 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
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parents:
87
diff
changeset
|
3375 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
74b7b9aed5f8
test TransferSyntax metadata
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diff
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|
3376 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
74b7b9aed5f8
test TransferSyntax metadata
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parents:
87
diff
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|
3377 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
test TransferSyntax metadata
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parents:
87
diff
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|
3378 |
|
78
b89af51797ff
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diff
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|
3379 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
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74
diff
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|
3380 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
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diff
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|
3381 else: |
|
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parents:
74
diff
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|
3382 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
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|
3383 self.assertEqual(m, md5) |
|
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diff
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|
3384 |
|
b89af51797ff
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74
diff
changeset
|
3385 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
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74
diff
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|
3386 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
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diff
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|
3387 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
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parents:
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diff
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|
3388 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
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test_decode_transfer_syntax
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diff
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|
3389 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3390 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3391 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3392 | |
| 3393 # The 3 checks below don't work on big-endian | |
| 3394 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
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74
diff
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|
3395 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
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parents:
74
diff
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|
3396 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
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|
3397 |
|
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diff
changeset
|
3398 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3399 if not HasGdcmPlugin(_REMOTE): |
|
299
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|
3400 Check('1.2.840.10008.1.2.4.90', None) |
|
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|
3401 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3402 |
| 3403 | |
| 3404 def test_raw_frame(self): | |
| 3405 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3406 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3407 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3408 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3409 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3410 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3411 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3412 | |
| 3413 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3414 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3415 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3416 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3417 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3418 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3419 self.assertEqual("L", im.mode) | |
| 3420 self.assertEqual(512, im.size[0]) | |
| 3421 self.assertEqual(512, im.size[1]) | |
| 3422 | |
| 3423 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3424 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3425 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3426 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3427 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3428 self.assertEqual(69214, len(a)) | |
| 3429 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3430 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3431 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3432 self.assertEqual("RGB", im.mode) | |
| 3433 self.assertEqual(512, im.size[0]) | |
| 3434 self.assertEqual(512, im.size[1]) | |
| 323 | 3435 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3436 self.assertEqual("RGB", im.mode) |
| 3437 self.assertEqual(512, im.size[0]) | |
| 3438 self.assertEqual(512, im.size[1]) | |
| 81 | 3439 |
| 3440 | |
| 3441 | |
| 3442 def test_rest_movescu(self): | |
| 3443 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3444 | |
| 3445 # Upload 4 instances | |
| 3446 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3447 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3448 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3449 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3450 | |
| 3451 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3452 for p in DoGet(_REMOTE, '/patients'): | |
| 3453 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3454 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3455 | |
| 3456 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3457 | |
| 3458 # Upload instance Brainix/Flair/IM-0001-0001.dcm | |
| 3459 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance', | |
| 3460 'Resources' : [ | |
| 3461 { | |
| 3462 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3463 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3464 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', | |
| 3465 } | |
| 3466 ]}) | |
| 3467 | |
| 3468 # Upload series Brainix/Flair/* | |
| 3469 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3470 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3471 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3472 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3473 | |
| 3474 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3475 'Resources' : [ | |
| 3476 { | |
| 3477 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3478 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3479 } | |
| 3480 ]}) | |
| 3481 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3482 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3483 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3484 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3485 | |
| 3486 # Upload series Brainix/Epi/* | |
| 3487 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
| 3488 'Resources' : [ | |
| 3489 { | |
| 3490 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3491 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3492 } | |
| 3493 ]}) | |
| 3494 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3495 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3496 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3497 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3498 | |
| 3499 # Upload study Knee/* | |
| 3500 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3501 'Resources' : [ | |
| 3502 { | |
| 3503 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3504 } | |
| 3505 ]}) | |
| 3506 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3507 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3508 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3509 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3510 | |
| 3511 # Reset | |
| 3512 for p in DoGet(_REMOTE, '/patients'): | |
| 3513 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3514 | |
| 3515 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3516 | |
| 3517 | |
| 3518 # Upload all at once | |
| 3519 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
| 3520 'Resources' : [ | |
| 3521 { | |
| 3522 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 3523 }, | |
| 3524 { | |
| 3525 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3526 } | |
| 3527 ]}) | |
| 3528 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3529 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 3530 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
| 3531 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 3532 | |
|
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|
3533 |
|
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|
3534 |
|
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diff
changeset
|
3535 def test_reconstruct_json(self): |
|
0401ef51f5c1
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changeset
|
3536 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3537 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3538 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3539 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3540 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3541 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3542 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3543 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3544 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3545 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3546 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3547 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3548 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3549 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3550 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3551 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3552 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3553 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3554 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3555 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3556 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3557 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3558 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3559 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3560 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3561 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3562 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3563 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3564 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3565 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3566 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3567 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3568 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3569 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3570 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3571 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3572 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3573 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3574 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3575 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3576 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3577 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3578 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3579 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3580 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3581 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3582 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3583 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3584 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3585 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3586 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3587 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3588 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3589 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3590 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3591 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3592 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3593 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3594 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3595 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3596 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3597 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3598 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3599 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3600 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3601 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3602 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3603 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3604 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3605 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3606 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3607 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3608 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3609 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3610 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3611 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3612 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3613 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3614 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3615 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3616 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3617 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3618 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3619 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3620 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3621 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3622 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3623 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3624 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3625 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3626 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3627 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3628 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3629 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3630 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3631 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3632 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3633 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3634 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3635 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3636 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3637 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3638 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3639 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3640 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3641 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3642 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3643 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3644 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3645 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3646 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3647 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3648 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3649 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3650 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3651 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3652 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3653 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3654 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3655 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3656 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3657 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3658 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3659 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3660 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3661 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3662 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3663 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3664 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3665 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3666 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3667 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3668 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3669 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3670 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3671 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3672 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3673 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3674 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3675 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3676 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3677 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3678 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3679 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3680 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3681 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3682 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3683 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3684 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3685 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3686 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3687 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3688 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3689 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3690 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3691 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3692 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3693 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3694 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3695 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3696 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3697 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3698 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3699 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3700 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3701 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3702 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3703 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3704 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3705 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3706 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3707 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3708 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3709 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3710 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3711 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3712 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3713 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3714 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3715 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3716 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3717 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3718 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3719 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3720 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3721 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3722 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3723 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3724 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3725 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3726 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3727 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3728 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3729 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3730 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3731 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3732 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3733 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3734 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3735 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3736 }, |
| 119 | 3737 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 3738 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3739 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3740 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3741 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3742 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3743 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3744 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3745 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3746 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3747 b = instances[0] if instances[1] == a else instances[1] |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3748 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3749 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3750 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3751 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3752 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3753 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3754 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3755 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3756 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {}) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3757 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3758 CompareMainDicomTag('hello', a, 'study', 'StudyDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3759 CompareMainDicomTag('world', a, 'series', 'SeriesDescription') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3760 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
| 102 | 3761 |
| 104 | 3762 def test_httpClient_lua(self): |
| 3763 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: | |
| 102 | 3764 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua') |
| 3765 | |
| 3766 self.assertIn('OK', result) | |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3767 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3768 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3769 def test_bitbucket_issue_44(self): |
| 319 | 3770 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3771 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3772 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3773 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3774 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3775 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3776 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3777 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3778 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3779 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3780 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3781 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3782 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3783 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3784 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3785 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3786 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3787 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3788 self.assertEqual(2010, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3789 self.assertEqual(2446, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3790 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3791 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3792 # white (255), should be rendered as black (0) => invert |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3793 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3794 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3795 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3796 else: |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3797 self.assertEqual(0, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3798 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3799 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3800 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3801 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3802 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3803 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3804 # This is the key image, with MONOCHROME2. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3805 # white (255), should be rendered as white (255) |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3806 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3807 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3808 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3809 def test_bitbucket_issue_42(self): |
| 319 | 3810 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 3811 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3812 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3813 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3814 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 3815 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3816 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3817 self.assertTrue('PatientID' in modified) |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3818 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3819 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3820 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3821 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
| 319 | 3822 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3823 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3824 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3825 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3826 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3827 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3828 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3829 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3830 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3831 |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3832 # Check using BRAINIX |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3833 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3834 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3835 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3836 self.assertEqual(4, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3837 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3838 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3839 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
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diff
changeset
|
3840 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
changeset
|
3841 self.assertEqual(4, len(a)) |
|
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3842 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3843 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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test_rest_find_limitµ
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diff
changeset
|
3844 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
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diff
changeset
|
3845 'Since' : 2, |
|
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3846 'Limit' : 4 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
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112
diff
changeset
|
3847 self.assertEqual(2, len(a)) |
|
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3848 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3849 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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diff
changeset
|
3850 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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diff
changeset
|
3851 'Limit' : 3 }) |
|
3e5934363e76
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diff
changeset
|
3852 self.assertEqual(3, len(a)) |
|
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diff
changeset
|
3853 |
|
3e5934363e76
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112
diff
changeset
|
3854 b = [] |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3855 for i in range(4): |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3856 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3857 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3858 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3859 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3860 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3861 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3862 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3863 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3864 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3865 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3866 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
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parents:
112
diff
changeset
|
3867 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3868 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3869 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3870 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3871 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3872 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3873 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3874 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3875 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3876 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3877 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3878 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3879 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3880 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3881 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3882 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3883 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3884 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3885 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3886 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3887 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3888 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3889 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3890 # "PHI remaining after anonymization" |
| 319 | 3891 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3892 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3893 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3894 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3895 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3896 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3897 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3898 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3899 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3900 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3901 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
3902 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3903 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3904 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3905 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3906 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3907 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3908 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3909 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3910 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3911 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3912 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3913 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3914 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3915 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3916 self.assertTrue('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3917 self.assertTrue('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3918 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3919 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3920 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3921 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3922 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3923 self.assertFalse('0010,1060' in tags) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3924 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3925 t = {} |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3926 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3927 t[value['Name']] = value['Value'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3928 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3929 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3930 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3931 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3932 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3933 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3934 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3935 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3936 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3937 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3938 f.flush() |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3939 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3940 stderr = subprocess.STDOUT).split('\n') |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3941 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3942 |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
117
diff
changeset
|
3943 def test_bitbucket_issue_55(self): |
|
a954c535fef6
test_bitbucket_issue_55
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parents:
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diff
changeset
|
3944 def Run(modify, query): |
|
a954c535fef6
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diff
changeset
|
3945 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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test_bitbucket_issue_55
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117
diff
changeset
|
3946 |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
changeset
|
3947 operation = 'modify' if modify else 'anonymize' |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3948 |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
changeset
|
3949 self.assertRaises(Exception, lambda: DoPost( |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3950 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3951 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3952 |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
changeset
|
3953 query["Force"] = True |
|
a954c535fef6
test_bitbucket_issue_55
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117
diff
changeset
|
3954 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
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test_bitbucket_issue_55
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diff
changeset
|
3955 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
3956 DoDelete(_REMOTE, a) |
|
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diff
changeset
|
3957 |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3958 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
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117
diff
changeset
|
3959 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3960 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
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diff
changeset
|
3961 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3962 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3963 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3964 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3965 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3966 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3967 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3968 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3969 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3970 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3971 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3972 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3973 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3974 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3975 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3976 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3977 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3978 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3979 # is set to "false" (default value). |
| 319 | 3980 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3981 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3982 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3983 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3984 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3985 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3986 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3987 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3988 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3989 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3990 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3991 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3992 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3993 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3994 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3995 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3996 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3997 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3998 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3999 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4000 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4001 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4002 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4003 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4004 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4005 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4006 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4007 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4008 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4009 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4010 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4011 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4012 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4013 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4014 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4015 |
| 125 | 4016 |
| 4017 def test_gbk_alias(self): | |
| 4018 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4019 # This test fails on Orthanc <= 1.3.0 | |
| 4020 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4021 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4022 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4023 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4024 |
| 4025 | |
| 4026 def test_long_tag(self): | |
| 4027 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4028 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4029 | |
| 4030 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4031 self.assertTrue('0018,1020' in tags) | |
| 4032 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4033 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4034 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4035 | |
| 4036 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4037 self.assertTrue('0018,1020' in tags) | |
| 4038 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4039 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4040 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4041 | |
| 4042 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4043 self.assertTrue('SoftwareVersions' in tags) | |
| 4044 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4045 self.assertTrue('HeartRate' in tags) | |
| 4046 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4047 | |
| 4048 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4049 self.assertTrue('SoftwareVersions' in tags) | |
| 4050 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4051 | |
| 4052 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4053 self.assertTrue('SoftwareVersions' in tags) | |
| 4054 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4055 | |
| 4056 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4057 self.assertTrue('SoftwareVersions' in tags) | |
| 4058 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4059 | |
| 4060 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4061 self.assertEqual(1, len(tags)) | |
| 4062 self.assertTrue(i in tags.keys()) | |
| 4063 self.assertTrue('0018,1020' in tags[i]) | |
| 4064 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4065 | |
| 4066 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4067 self.assertEqual(1, len(tags)) | |
| 4068 self.assertTrue(i in tags.keys()) | |
| 4069 self.assertTrue('0018,1020' in tags[i]) | |
| 4070 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4071 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4072 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4073 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4074 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4075 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4076 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4077 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4078 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4079 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4080 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4081 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4082 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4083 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4084 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4085 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4086 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4087 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4088 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4089 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4090 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4091 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4092 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4093 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4094 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4095 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4096 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4097 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4098 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4099 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4100 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4101 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4102 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4103 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4104 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4105 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4106 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4107 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4108 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4109 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4110 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4111 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4112 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4113 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4114 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4115 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4116 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4117 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4118 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4119 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4120 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4121 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4122 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4123 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4124 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4125 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4126 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4127 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4128 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4129 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4130 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4131 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4132 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4133 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4134 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4135 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4136 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4137 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4138 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4139 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4140 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4141 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4142 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4143 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4144 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4145 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4146 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4147 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4148 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4149 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4150 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4151 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4152 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4153 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4154 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4155 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4156 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4157 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4158 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4159 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4160 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4161 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4162 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4163 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4164 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4165 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4166 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4167 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4168 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4169 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4170 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4171 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4172 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4173 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4174 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4175 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4176 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4177 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4178 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4179 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4180 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4181 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4182 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4183 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4184 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4185 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4186 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4187 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4188 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4189 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4190 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4191 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4192 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4193 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4194 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4195 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4196 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4197 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4198 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4199 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4200 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4201 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4202 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
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130
diff
changeset
|
4203 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
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test_anonymize_relationships_3
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132
diff
changeset
|
4204 |
|
f0d4c4707e64
test_anonymize_relationships_3
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parents:
132
diff
changeset
|
4205 |
|
f0d4c4707e64
test_anonymize_relationships_3
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parents:
132
diff
changeset
|
4206 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
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parents:
132
diff
changeset
|
4207 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4208 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4209 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4210 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4211 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4212 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4213 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4214 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4215 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4216 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4217 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4218 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4219 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4220 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4221 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4222 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4223 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4224 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4225 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4226 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4227 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4228 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4229 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4230 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4231 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4232 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4233 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4234 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4235 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4236 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4237 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4238 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4239 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4240 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4241 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4242 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4243 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4244 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4245 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4246 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4247 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4248 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4249 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4250 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4251 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4252 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4253 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4254 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4255 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4256 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4257 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4258 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4259 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4260 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4261 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4262 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4263 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4264 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
| 319 | 4265 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4266 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4267 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4268 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4269 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4270 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4271 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4272 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4273 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4274 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4275 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4276 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4277 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4278 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4279 self.assertEqual(1, len(b)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4280 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4281 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4282 self.assertEqual(1, len(c)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4283 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4284 self.assertEqual(a, b) # Modified DICOM |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4285 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4286 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4287 |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4288 def test_metadata_origin(self): |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4289 # Upload using the REST API |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4290 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4291 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4292 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4293 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4294 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4295 |
| 4296 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4297 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4298 | |
|
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4299 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4300 self.assertEqual('RestApi', m['Origin']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4301 self.assertEqual('', m['RemoteAET']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4302 self.assertNotEqual('', m['RemoteIP']) |
|
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4303 self.assertFalse('CalledAET' in m) |
| 315 | 4304 self.assertTrue('HttpUsername' in m) |
| 4305 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
144
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4306 |
|
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|
4307 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4308 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4309 self.assertEqual('1', m['IndexInSeries']) |
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4310 self.assertTrue('ReceptionDate' in m) |
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4311 |
|
143
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4312 DoDelete(_REMOTE, '/instances/%s' % i) |
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4313 |
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|
4314 # Upload using the DICOM protocol |
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4315 subprocess.check_call([ FindExecutable('storescu'), |
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4316 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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4317 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
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4318 '-xw' ]) # Propose JPEG2000 |
|
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4319 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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4320 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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4321 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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4322 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
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4323 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
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4324 |
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4325 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
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4326 self.assertEqual('DicomProtocol', m['Origin']) |
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4327 self.assertEqual('STORESCU', m['RemoteAET']) |
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4328 self.assertNotEqual('', m['RemoteIP']) |
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4329 self.assertEqual('ANY-SCP', m['CalledAET']) |
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4330 self.assertFalse('HttpUsername' in m) |
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4331 |
|
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|
4332 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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4333 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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4334 self.assertEqual('1', m['IndexInSeries']) |
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|
4335 self.assertTrue('ReceptionDate' in m) |
| 147 | 4336 |
| 4337 | |
| 4338 def test_lua_deadlock(self): | |
| 4339 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4340 # is with the lua script I'm using for conversion of images to | |
| 4341 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4342 # instance appears to be stored and then everything just | |
| 4343 # halts, ie Orthanc wont respond to anything after that." | |
| 4344 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4345 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4346 |
| 4347 subprocess.check_call([ FindExecutable('storescu'), | |
| 4348 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4349 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4350 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4351 ]) | |
| 4352 | |
| 4353 instances = DoGet(_REMOTE, '/instances') | |
| 4354 self.assertEqual(2, len(instances)) | |
| 4355 | |
| 4356 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4357 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4358 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4359 self.assertEqual(t1, t2); |
|
154
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4360 |
|
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|
4361 |
|
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|
4362 def test_find_group_length(self): |
|
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4363 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
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4364 # one of the Generic Group Length tags (*, 0x0000) |
|
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4365 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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4366 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
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4367 self.assertFalse('UnableToProcess' in result) |
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4368 self.assertFalse('E:' in result) |
|
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4369 |
|
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|
4370 |
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|
4371 def test_split(self): |
|
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4372 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
4373 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
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|
4374 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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|
4375 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
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4376 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4377 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4378 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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|
4379 |
|
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changeset
|
4380 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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|
4381 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4382 |
|
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|
4383 info = DoGet(_REMOTE, '/studies/%s' % study) |
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|
4384 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
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|
4385 |
|
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changeset
|
4386 job = MonitorJob2(_REMOTE, lambda: DoPost |
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diff
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|
4387 (_REMOTE, '/studies/%s/split' % study, { |
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diff
changeset
|
4388 'Series' : [ t2 ], |
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|
4389 'Replace' : { 'PatientName' : 'Hello' }, |
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|
4390 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4391 'KeepSource' : False, |
| 4392 'Asynchronous' : True | |
|
179
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|
4393 })) |
|
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diff
changeset
|
4394 |
|
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diff
changeset
|
4395 self.assertNotEqual(None, job) |
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changeset
|
4396 |
|
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diff
changeset
|
4397 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4398 self.assertEqual(2, len(studies)) |
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|
4399 |
|
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changeset
|
4400 series = set(DoGet(_REMOTE, '/series')) |
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|
4401 self.assertEqual(2, len(series)) |
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|
4402 self.assertTrue(t1 in series) |
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|
4403 |
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diff
changeset
|
4404 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
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|
4405 self.assertTrue(study in studies) |
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|
4406 self.assertTrue(study2 in studies) |
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|
4407 |
|
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diff
changeset
|
4408 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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|
4409 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4410 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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4411 |
|
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|
4412 sopInstanceUids = set() |
|
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|
4413 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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|
4414 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4415 |
|
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|
4416 self.assertTrue(knee1Sop in sopInstanceUids) |
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|
4417 |
|
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|
4418 # Fails if Orthanc <= 1.5.7 |
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|
4419 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4420 |
|
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|
4421 # One original instance is kept, another one is added because of the split |
|
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|
4422 self.assertEqual(2, len(sopInstanceUids)) |
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4423 |
|
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4424 |
|
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|
4425 def test_merge(self): |
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|
4426 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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changeset
|
4427 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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changeset
|
4428 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4429 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
179
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|
4430 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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|
4431 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
4432 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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|
4433 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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|
4434 |
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|
4435 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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|
4436 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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|
4437 |
|
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changeset
|
4438 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
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|
4439 (_REMOTE, '/studies/%s/merge' % knee, { |
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|
4440 'Resources' : [ brainix ], |
| 181 | 4441 'KeepSource' : True, |
| 4442 'Synchronous' : False | |
|
179
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diff
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|
4443 })) |
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changeset
|
4444 |
|
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changeset
|
4445 self.assertNotEqual(None, job) |
|
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changeset
|
4446 |
|
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changeset
|
4447 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4448 self.assertEqual(2, len(studies)) |
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|
4449 self.assertTrue(knee in studies) |
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|
4450 self.assertTrue(brainix in studies) |
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|
4451 |
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changeset
|
4452 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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|
4453 self.assertTrue(t1 in series) |
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|
4454 series.remove(t1) |
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|
4455 self.assertEqual(1, len(series)) |
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|
4456 |
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|
4457 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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|
4458 self.assertEqual(1, len(instances)) |
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|
4459 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4460 |
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changeset
|
4461 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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|
4462 self.assertEqual(1, len(instances)) |
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4463 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4464 |
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changeset
|
4465 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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|
4466 self.assertEqual(1, len(instances)) |
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|
4467 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4468 |
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|
4469 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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changeset
|
4470 |
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|
4471 for key in tags['PatientMainDicomTags']: |
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|
4472 self.assertEqual(a[key], merged[key]) |
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|
4473 if (key in b and key != 'PatientSex'): |
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|
4474 self.assertNotEqual(a[key], b[key]) |
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4475 |
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|
4476 for key in tags['MainDicomTags']: |
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|
4477 # Not in the patient/study module |
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|
4478 if (not key in [ 'InstitutionName', |
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|
4479 'RequestingPhysician', |
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|
4480 'RequestedProcedureDescription', ]): |
|
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|
4481 self.assertEqual(a[key], merged[key]) |
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|
4482 if (key in b): |
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|
4483 self.assertNotEqual(a[key], b[key]) |
|
254
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|
4484 |
|
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changeset
|
4485 sopInstanceUids = set() |
|
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|
4486 for i in DoGet(_REMOTE, '/instances?expand'): |
|
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|
4487 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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changeset
|
4488 |
|
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changeset
|
4489 self.assertTrue(kneeSop in sopInstanceUids) |
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|
4490 self.assertTrue(brainixSop in sopInstanceUids) |
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changeset
|
4491 |
|
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changeset
|
4492 # Fails if Orthanc <= 1.5.7 |
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|
4493 # The 2 original instances are kept, another one is added because of the merge |
|
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changeset
|
4494 self.assertEqual(3, len(sopInstanceUids)) |
|
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|
4495 |
| 187 | 4496 |
| 4497 def test_async_archive(self): | |
| 4498 # Testing the asynchronous generation of archives/medias (new | |
| 4499 # in Orthanc 1.4.3) | |
| 4500 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 4501 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 4502 | |
| 4503 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 4504 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 4505 | |
| 4506 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 4507 (_REMOTE, '/studies/%s/archive' % kneeT1, { | |
| 4508 'Synchronous' : False | |
| 4509 })) | |
| 4510 | |
| 4511 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4512 self.assertEqual(1, len(z.namelist())) | |
| 4513 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4514 | |
|
354
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diff
changeset
|
4515 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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changeset
|
4516 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4517 self.assertEqual(1, info['Content']['InstancesCount']) |
|
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changeset
|
4518 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
|
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changeset
|
4519 |
| 187 | 4520 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 4521 (_REMOTE, '/studies/%s/media' % kneeT1, { | |
| 4522 'Synchronous' : False | |
| 4523 })) | |
| 4524 | |
| 4525 # The archive from the first job has been replaced by the | |
| 4526 # archive from second job (as MediaArchiveSize == 1) | |
| 4527 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 4528 | |
| 4529 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 4530 self.assertEqual(2, len(z.namelist())) | |
| 4531 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 4532 | |
|
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diff
changeset
|
4533 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
4534 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4535 self.assertEqual(1, info['Content']['InstancesCount']) |
|
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changeset
|
4536 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4537 |
| 187 | 4538 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4539 (_REMOTE, '/tools/create-archive', { | |
| 4540 'Synchronous' : False, | |
| 4541 'Resources' : [ kneeT1, kneeT2 ], | |
| 4542 })) | |
| 4543 | |
| 4544 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4545 self.assertEqual(2, len(z.namelist())) | |
| 4546 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 4547 | |
|
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|
4548 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
4549 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
4550 self.assertEqual(2, info['Content']['InstancesCount']) |
|
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|
4551 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4552 |
| 187 | 4553 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 4554 (_REMOTE, '/tools/create-media', { | |
| 4555 'Synchronous' : False, | |
| 4556 'Resources' : [ kneeT1, kneeT2 ], | |
| 4557 })) | |
| 4558 | |
| 4559 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 4560 self.assertEqual(3, len(z.namelist())) | |
| 4561 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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|
4562 |
|
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|
4563 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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changeset
|
4564 self.assertEqual(2, info['Content']['InstancesCount']) |
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|
4565 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
4566 |
| 187 | 4567 |
|
188
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|
4568 def test_queries_hierarchy(self): |
|
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|
4569 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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|
4570 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
4571 |
|
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|
4572 tags = { |
|
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|
4573 'NumberOfPatientRelatedInstances' : '', |
|
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|
4574 'NumberOfPatientRelatedSeries' : '', |
|
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changeset
|
4575 'NumberOfPatientRelatedStudies' : '', |
|
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changeset
|
4576 'NumberOfStudyRelatedInstances' : '', |
|
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diff
changeset
|
4577 'NumberOfStudyRelatedSeries' : '', |
|
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diff
changeset
|
4578 'NumberOfSeriesRelatedInstances' : '', |
|
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diff
changeset
|
4579 } |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4580 |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4581 tags2 = copy.copy(tags) |
|
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4582 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
11719f19bd62
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diff
changeset
|
4583 |
|
188
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new test: test_queries_hierarchy
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diff
changeset
|
4584 patient = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
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diff
changeset
|
4585 'Level' : 'Patient', |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4586 'Query' : tags2 |
|
188
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diff
changeset
|
4587 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4588 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4589 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4590 'Level' : 'Study', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4591 'Query' : tags2 |
|
188
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4592 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4593 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4594 series = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4595 'Level' : 'Series', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4596 'Query' : tags2 |
|
188
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diff
changeset
|
4597 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4598 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4599 instance = DoPost(_REMOTE, '/modalities/self/query', { |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4600 'Level' : 'Instance', |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4601 'Query' : tags2 |
|
188
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diff
changeset
|
4602 }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4603 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4604 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4605 self.assertEqual(1, len(p)) |
|
7d585263808b
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diff
changeset
|
4606 self.assertEqual('887', p[0]['PatientID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4607 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4608 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
|
7d585263808b
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4609 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4610 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4611 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
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diff
changeset
|
4612 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4613 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4614 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4615 self.assertEqual(1, len(p)) |
|
7d585263808b
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changeset
|
4616 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4617 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4618 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4619 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4620 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4621 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4622 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4623 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4624 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4625 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
4626 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4627 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4628 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4629 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4630 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4631 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4632 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4633 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4634 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4635 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
4636 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4637 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4638 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4639 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4640 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4641 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4642 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4643 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4644 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4645 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4646 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4647 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4648 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4649 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4650 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4651 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4652 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4653 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4654 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4655 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4656 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4657 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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187
diff
changeset
|
4658 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4659 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4660 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4661 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4662 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4663 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4664 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4665 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
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new test: test_queries_hierarchy
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diff
changeset
|
4666 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4667 |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
4668 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4669 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
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changeset
|
4670 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
4671 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4672 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4673 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
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diff
changeset
|
4674 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
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188
diff
changeset
|
4675 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4676 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4677 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4678 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4679 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4680 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4681 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4682 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4683 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4684 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4685 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4686 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4687 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4688 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4689 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4690 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4691 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4692 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4693 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4694 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4695 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4696 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4697 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4698 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4699 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4700 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4701 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4702 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4703 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4704 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4705 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4706 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4707 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4708 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4709 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4710 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4711 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4712 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4713 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4714 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4715 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4716 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4717 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4718 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4719 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4720 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4721 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4722 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4723 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4724 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4725 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4726 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4727 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4728 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4729 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4730 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4731 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4732 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4733 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4734 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4735 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4736 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4737 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4738 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4739 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4740 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4741 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4742 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4743 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4744 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4745 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4746 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4747 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4748 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4749 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4750 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4751 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4752 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4753 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4754 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4755 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4756 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4757 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4758 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
4759 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4760 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4761 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4762 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4763 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4764 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4765 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4766 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4767 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4768 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4769 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4770 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4771 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4772 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4773 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
4774 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4775 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4776 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4777 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4778 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4779 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4780 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4781 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4782 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4783 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4784 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4785 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4786 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4787 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4788 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4789 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4790 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4791 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4792 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4793 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4794 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4795 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4796 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4797 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
4798 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4799 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4800 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4801 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4802 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4803 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4804 z = GetArchive(_REMOTE, '/patients/%s/media' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4805 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4806 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4807 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4808 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4809 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4810 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4811 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4812 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4813 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4814 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4815 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4816 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4817 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4818 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4819 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4820 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4821 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4822 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4823 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4824 # Just like the "CR000000.dcm" of the issue, the test image |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4825 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4826 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4827 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4828 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4829 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4830 # In wildcard constraints, the patient sex must be set for a match to occur |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4831 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4832 self.assertEqual(0, CountRestResults('*')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4833 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4834 # In single-valued constraints, the patient sex must be set |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4835 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4836 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4837 self.assertEqual(0, CountRestResults('F')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4838 self.assertEqual(0, CountRestResults('M')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4839 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4840 # Empty constraints are only used to ask the actual value of |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4841 # the tag to be added to the *answer*. The tag should not used |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4842 # as a filter in such a situation. |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4843 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4844 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4845 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4846 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4847 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4848 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4849 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4850 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4851 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4852 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4853 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4854 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4855 self.assertEqual(0, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4856 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4857 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4858 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4859 self.assertEqual(1, len(a)) |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4860 |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4861 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4862 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
2c50c8f340c2
test_rest_modalities_in_study
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parents:
208
diff
changeset
|
4863 self.assertEqual(1, len(a)) |
| 211 | 4864 |
| 4865 | |
| 4866 def test_series_status(self): | |
| 4867 def HasCompletedInChanges(): | |
| 4868 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 4869 if c['ChangeType'] == 'CompletedSeries': | |
| 4870 return True; | |
| 4871 | |
| 4872 return False | |
| 4873 | |
| 4874 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 4875 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 4876 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4877 self.assertFalse(HasCompletedInChanges()) | |
| 4878 | |
| 4879 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 4880 | |
| 4881 for i in range(3): | |
| 4882 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 4883 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4884 self.assertFalse(HasCompletedInChanges()) | |
| 4885 | |
| 4886 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 4887 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4888 self.assertTrue(HasCompletedInChanges()) | |
| 4889 | |
| 4890 DoDelete(_REMOTE, '/changes') | |
| 4891 self.assertFalse(HasCompletedInChanges()) | |
| 4892 | |
| 4893 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 4894 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 4895 self.assertFalse(HasCompletedInChanges()) | |
| 4896 | |
| 215 | 4897 |
| 4898 def test_dicomweb(self): | |
| 4899 def Compare(dicom, reference): | |
| 4900 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4901 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 4902 headers = { 'Accept' : 'application/dicom+json' }) | |
| 4903 with open(GetDatabasePath(reference), 'rb') as c: | |
| 4904 d = json.load(c) | |
| 220 | 4905 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 4906 |
| 4907 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 4908 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 4909 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 4910 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 4911 |
| 4912 | |
| 4913 def test_issue_95_encodings(self): | |
| 319 | 4914 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 4915 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 4916 | |
| 4917 # Very useful tool: "file2" from package "file-kanji" | |
| 4918 | |
| 4919 def GetPatientName(dicom): | |
| 4920 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 4921 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4922 return j['PatientName'] | |
| 4923 | |
| 4924 def ComparePatientName(name, dicom): | |
| 4925 self.assertEqual(name, GetPatientName(dicom)) | |
| 4926 | |
| 4927 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4928 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 4929 | |
| 4930 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 4931 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 4932 | |
| 4933 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 4934 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 4935 | |
| 4936 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 4937 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 4938 | |
| 4939 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 4940 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 4941 | |
| 4942 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 4943 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 4944 | |
| 4945 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 4946 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 4947 | |
| 4948 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 4949 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 4950 | |
| 4951 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 4952 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 4953 # Linux console into Emacs automatically reverse the string | |
| 4954 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 4955 | |
| 4956 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 4957 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 4958 # characters by default, but copy/paste works with Emacs | |
| 4959 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 4960 | |
| 4961 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 4962 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 4963 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 4964 # remainer. Orthanc only takes into consideration the first | |
| 4965 # codepage: This is a limitation. | |
| 4966 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 4967 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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4968 |
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4969 |
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4970 def test_findscu_missing_tags(self): |
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4971 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
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4972 UploadInstance(_REMOTE, 'DummyCT.dcm') |
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4973 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
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4974 |
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4975 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
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4976 |
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4977 # We have 2 instances... |
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4978 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
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4979 self.assertEqual(2, len(patientNames)) |
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4980 self.assertEqual('KNIX', patientNames[0]) |
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4981 self.assertEqual('KNIX', patientNames[1]) |
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4982 |
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4983 # ...but only 1 value for the "Rows" tag |
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4984 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
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4985 self.assertEqual(1, len(rows)) |
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4986 self.assertEqual('512', rows[0]) |
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4987 |
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4988 |
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4989 |
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4990 def test_bitbucket_issue_131(self): |
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4991 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
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4992 # StudyInstanceUID in it's database." |
| 319 | 4993 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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4994 |
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4995 # Insert 2 instances, with the same StudyInstanceUID, but with |
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4996 # different patient IDs. Orthanc will create 2 distincts |
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4997 # patients, and the hierarchy of resources above the two |
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4998 # instances will be fully disjoint. |
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4999 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
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5000 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
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5001 |
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5002 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
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5003 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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5004 |
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5005 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5006 'Level' : 'Study', |
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5007 'Query' : {"PatientID": "A" }})['ID'] |
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5008 |
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5009 # 1 study is matched |
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5010 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5011 |
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5012 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5013 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5014 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5015 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5016 |
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5017 # The two studies are matched, as we made the request at the |
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5018 # Study level, thus the shared StudyInstanceUID is used as the key |
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5019 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5020 |
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5021 |
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5022 # Match the 2 studies |
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5023 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5024 'Level' : 'Study', |
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5025 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
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5026 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5027 DropOrthanc(_LOCAL) |
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5028 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5029 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5030 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5031 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5032 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5033 |
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5034 |
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5035 # Same test, at the patient level => only 1 instance is transfered |
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5036 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5037 'Level' : 'Patient', |
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5038 'Query' : {"PatientID": "A" }})['ID'] |
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5039 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5040 DropOrthanc(_LOCAL) |
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5041 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5042 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5043 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5044 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5045 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5046 |
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5047 |
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5048 # Same test, at the series level => only 1 instance is transfered |
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5049 a = DoPost(_REMOTE, '/modalities/self/query', { |
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5050 'Level' : 'Series', |
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5051 'Query' : {"PatientID": "A" }})['ID'] |
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5052 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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5053 DropOrthanc(_LOCAL) |
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5054 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5055 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5056 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5057 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
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5058 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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5059 |
|
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5060 |
|
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5061 def test_bitbucket_issue_136(self): |
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5062 UploadInstance(_REMOTE, 'Issue137.dcm') |
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|
5063 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
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5064 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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|
5065 self.assertEqual(1, len(patientNames)) |
|
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5066 self.assertEqual('John Doe', patientNames[0]) |
|
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5067 |
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5068 |
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5069 def test_anonymize_relationships_4(self): |
|
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5070 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
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5071 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
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5072 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
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5073 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
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5074 |
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5075 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
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5076 'application/json')['ID'] |
|
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5077 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
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5078 self.assertEqual(2, len(series)) |
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5079 |
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5080 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
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5081 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
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5082 self.assertEqual(1, len(cr)) |
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5083 self.assertEqual(1, len(pr)) |
|
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5084 self.assertEqual(1, len(cr[0]['Instances'])) |
|
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5085 self.assertEqual(1, len(pr[0]['Instances'])) |
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5086 |
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5087 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
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5088 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
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5089 |
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5090 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
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5091 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
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5092 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
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|
5093 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
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5094 |
|
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diff
changeset
|
5095 # This fails on Orthanc <= 1.5.6 |
|
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5096 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
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test_anonymize_relationships_4
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diff
changeset
|
5097 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
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parents:
234
diff
changeset
|
5098 |
|
9929e4af2b7a
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diff
changeset
|
5099 |
|
255
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|
5100 def test_anonymize_relationships_5(self): |
|
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5101 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
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|
5102 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
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diff
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|
5103 oStudyId = ct1['ParentStudy'] |
|
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|
5104 oCtInstanceId = ct1['ID'] |
|
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|
5105 oRtInstanceId = rt1['ID'] |
|
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diff
changeset
|
5106 |
|
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diff
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|
5107 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
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diff
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|
5108 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
|
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diff
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|
5109 |
|
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diff
changeset
|
5110 # first validate the relationships in the source data |
|
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|
5111 oStudyUID = oCtTags['StudyInstanceUID'] |
|
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diff
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|
5112 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
|
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|
5113 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
|
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diff
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|
5114 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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|
5115 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5116 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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diff
changeset
|
5117 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
|
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diff
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|
5118 |
|
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diff
changeset
|
5119 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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diff
changeset
|
5120 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
|
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diff
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|
5121 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
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|
5122 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
|
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diff
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|
5123 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5124 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
changeset
|
5125 |
|
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diff
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|
5126 ### anonymize |
|
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diff
changeset
|
5127 |
|
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diff
changeset
|
5128 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
|
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diff
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|
5129 'application/json')['ID'] |
|
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diff
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|
5130 |
|
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diff
changeset
|
5131 ### validate |
|
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diff
changeset
|
5132 |
|
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diff
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|
5133 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
|
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diff
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|
5134 self.assertEqual(2, len(aSeries)) |
|
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diff
changeset
|
5135 |
|
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diff
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|
5136 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
|
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diff
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|
5137 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
|
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diff
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|
5138 aCtInstanceId = aCt[0]['Instances'][0] |
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diff
changeset
|
5139 aRtInstanceId = aRt[0]['Instances'][0] |
|
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diff
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|
5140 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
|
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diff
changeset
|
5141 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
|
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diff
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|
5142 |
|
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diff
changeset
|
5143 # now validate the relationships in the anonymized data |
|
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diff
changeset
|
5144 aStudyUID = aCtTags['StudyInstanceUID'] |
|
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diff
changeset
|
5145 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
|
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diff
changeset
|
5146 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
|
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diff
changeset
|
5147 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
|
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|
5148 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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diff
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|
5149 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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diff
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|
5150 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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diff
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|
5151 |
|
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diff
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|
5152 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
|
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|
5153 # make sure all UIDs have been updated |
|
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changeset
|
5154 self.assertNotEqual(oStudyUID, aStudyUID) |
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|
5155 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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|
5156 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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diff
changeset
|
5157 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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|
5158 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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diff
changeset
|
5159 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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diff
changeset
|
5160 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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diff
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|
5161 |
|
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changeset
|
5162 # validate the relationships |
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|
5163 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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diff
changeset
|
5164 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5165 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5166 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
255
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|
5167 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
|
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diff
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|
5168 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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|
5169 |
| 256 | 5170 def test_anonymize_relationships_5b(self): |
| 5171 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5172 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5173 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5174 oStudyId = ct1['ParentStudy'] | |
| 5175 oCtInstanceId = ct1['ID'] | |
| 5176 oRtInstanceId = rt1['ID'] | |
| 5177 | |
| 5178 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5179 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5180 | |
| 5181 ### anonymize while forcing the StudyInstanceUID | |
| 5182 | |
| 5183 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5184 'application/json')['ID'] | |
| 5185 | |
| 5186 ### validate | |
| 5187 | |
| 5188 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5189 self.assertEqual(2, len(aSeries)) | |
| 5190 | |
| 5191 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5192 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5193 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5194 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5195 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5196 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5197 | |
| 5198 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5199 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5200 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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diff
changeset
|
5201 |
|
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diff
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|
5202 |
|
235
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diff
changeset
|
5203 def test_bitbucket_issue_140(self): |
| 266 | 5204 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5205 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
| 319 | 5206 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
235
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test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5207 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5208 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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test_bitbucket_issue_140
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diff
changeset
|
5209 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
changeset
|
5210 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5211 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5212 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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234
diff
changeset
|
5213 }, 'application/json') ['ID'] |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
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|
5214 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
changeset
|
5215 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5216 self.assertEqual(1, len(instances)) |
|
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test_bitbucket_issue_140
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diff
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|
5217 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5218 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5219 t = tags['4321,1012'] |
|
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test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5220 self.assertEqual('String', t['Type']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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diff
changeset
|
5221 self.assertEqual('RadioButton3', t['Name']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5222 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5223 self.assertEqual('jklmopq', t['Value']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
changeset
|
5224 |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5225 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
234
diff
changeset
|
5226 t = tags['4321,1012'] |
| 327 | 5227 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
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test_bitbucket_issue_140
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diff
changeset
|
5228 self.assertEqual('RadioButton3', t['Name']) |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5229 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
changeset
|
5230 self.assertEqual('aaabbbccc', t['Value']) |
|
236
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test_find_normalize
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235
diff
changeset
|
5231 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5232 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5233 def test_find_normalize(self): |
|
2de1aec255ae
test_find_normalize
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parents:
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diff
changeset
|
5234 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5235 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
5236 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5237 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
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235
diff
changeset
|
5238 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5239 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5240 'Query' : { 'Rows' : '42' } |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5241 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5242 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5243 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5244 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5245 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5246 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5247 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5248 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5249 'Query' : { 'Rows' : '42' }, |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5250 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5251 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5252 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5253 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5254 self.assertEqual(0, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5255 |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5256 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5257 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5258 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5259 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5260 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5261 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5262 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5263 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
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parents:
235
diff
changeset
|
5264 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5265 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5266 |
| 5267 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5268 'Level' : 'Instance', | |
| 5269 'Query' : { 'Rows' : '' }, | |
| 5270 'Normalize' : False | |
| 5271 }) ['ID'] | |
| 5272 | |
| 5273 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5274 self.assertEqual(1, len(b)) | |
| 5275 self.assertTrue('Rows' in b[0]) | |
| 5276 self.assertEqual('512', b[0]['Rows']) | |
| 5277 | |
| 5278 self.assertRaises(Exception, lambda: DoPost( | |
| 5279 _REMOTE, '/modalities/self/query', { | |
| 5280 'Level' : 'Instance', | |
| 5281 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5282 'Normalize' : False | |
| 5283 })) | |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5284 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5285 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5286 def test_bitbucket_issue_141(self): |
| 319 | 5287 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5288 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5289 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5290 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5291 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5292 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5293 |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5294 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
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237
diff
changeset
|
5295 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
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237
diff
changeset
|
5296 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
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237
diff
changeset
|
5297 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
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diff
changeset
|
5298 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
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237
diff
changeset
|
5299 |
|
cccf697a4e13
test_bitbucket_issue_141
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parents:
237
diff
changeset
|
5300 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
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diff
changeset
|
5301 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
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237
diff
changeset
|
5302 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
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237
diff
changeset
|
5303 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
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243
diff
changeset
|
5304 |
|
1abdab0ba0e6
test_modifying_missing_patientid
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243
diff
changeset
|
5305 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
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243
diff
changeset
|
5306 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
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diff
changeset
|
5307 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
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diff
changeset
|
5308 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
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243
diff
changeset
|
5309 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5310 |
| 5311 | |
| 5312 def test_log_level(self): | |
| 319 | 5313 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5314 original = DoGet(_REMOTE, '/tools/log-level') |
| 5315 | |
| 5316 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5317 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5318 DoGet(_REMOTE, '/system') | |
| 5319 | |
| 5320 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5321 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5322 DoGet(_REMOTE, '/system') | |
| 5323 | |
| 5324 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5325 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5326 DoGet(_REMOTE, '/system') | |
| 5327 | |
| 5328 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5329 | |
| 5330 # Switch back to the original log level | |
| 5331 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
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test_upload_compressed
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diff
changeset
|
5332 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5333 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5334 def test_upload_compressed(self): |
| 265 | 5335 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5336 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
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263
diff
changeset
|
5337 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5338 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5339 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5340 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5341 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5342 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5343 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5344 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5345 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5346 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5347 |
| 5348 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5349 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5350 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5351 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5352 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5353 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5354 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5355 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5356 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5357 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5358 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5359 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5360 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5361 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5362 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5363 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5364 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5365 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5366 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5367 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5368 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5369 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5370 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5371 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5372 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5373 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5374 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5375 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5376 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5377 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5378 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5379 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5380 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5381 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5382 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5383 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5384 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5385 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5386 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5387 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5388 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5389 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5390 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5391 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5392 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5393 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5394 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5395 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5396 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5397 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5398 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5399 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5400 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5401 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5402 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5403 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5404 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5405 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5406 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5407 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5408 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5409 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5410 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5411 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5412 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5413 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5414 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5415 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5416 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5417 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5418 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5419 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5420 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5421 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5422 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5423 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5424 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5425 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5426 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5427 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5428 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5429 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5430 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5431 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5432 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5433 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5434 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5435 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5436 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5437 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5438 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5439 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5440 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5441 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5442 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5443 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5444 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5445 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5446 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5447 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5448 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5449 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5450 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5451 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5452 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5453 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5454 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5455 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5456 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5457 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5458 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5459 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5460 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5461 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5462 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5463 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5464 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5465 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5466 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5467 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5468 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5469 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5470 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5471 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5472 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5473 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5474 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5475 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5476 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5477 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5478 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5479 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5480 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5481 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5482 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5483 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5484 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5485 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5486 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5487 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5488 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5489 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5490 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5491 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5492 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5493 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5494 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5495 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5496 # At the series level, the "ProtocolName" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5497 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5498 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5499 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5500 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5501 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5502 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5503 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5504 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5505 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5506 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5507 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5508 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5509 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5510 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5511 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5512 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5513 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5514 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5515 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5516 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5517 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5518 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5519 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5520 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5521 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5522 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5523 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5524 'ProtocolName' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5525 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5526 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5527 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5528 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5529 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5530 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5531 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5532 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5533 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5534 for level in [ 'Study', 'Series' ] : |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5535 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5536 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5537 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5538 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5539 'StudyInstanceUID' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5540 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5541 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5542 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5543 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5544 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5545 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5546 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5547 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5548 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5549 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5550 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5551 'Level' : level, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5552 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5553 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
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5554 }, |
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5555 'Normalize' : normalize, |
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5556 })) |
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5557 |
| 269 | 5558 # Wildcard matching is not allowed for this VR |
|
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5559 # This test fails on Orthanc <= 1.5.8 |
| 269 | 5560 self.assertRaises(Exception, lambda: CountAnswers({ |
|
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5561 'Level' : level, |
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5562 'Query' : { |
| 269 | 5563 'StudyInstanceUID' : '*' |
|
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5564 }, |
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5565 'Normalize' : normalize, |
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5566 })) |
| 265 | 5567 |
| 5568 | |
| 5569 def test_rendered(self): | |
| 5570 # New in Orthanc 1.6.0 | |
| 5571 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 5572 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5573 self.assertEqual("RGB", im.mode) | |
| 5574 self.assertEqual(41, im.size[0]) | |
| 5575 self.assertEqual(41, im.size[1]) | |
| 5576 | |
| 5577 # http://effbot.org/zone/pil-comparing-images.htm | |
| 5578 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 5579 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 5580 | |
| 5581 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 5582 self.assertEqual("RGB", im.mode) | |
| 5583 self.assertEqual(10, im.size[0]) | |
| 5584 self.assertEqual(10, im.size[1]) | |
| 5585 | |
| 5586 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 5587 self.assertEqual("RGB", im.mode) | |
| 5588 self.assertEqual(10, im.size[0]) | |
| 5589 self.assertEqual(10, im.size[1]) | |
| 5590 | |
| 5591 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 5592 self.assertEqual("RGB", im.mode) | |
| 5593 self.assertEqual(128, im.size[0]) | |
| 5594 self.assertEqual(128, im.size[1]) | |
| 5595 | |
| 5596 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 5597 self.assertEqual("RGB", im.mode) | |
| 5598 self.assertEqual(10, im.size[0]) | |
| 5599 self.assertEqual(10, im.size[1]) | |
| 5600 | |
| 5601 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 5602 self.assertEqual("RGB", im.mode) | |
| 5603 self.assertEqual(10, im.size[0]) | |
| 5604 self.assertEqual(10, im.size[1]) | |
| 5605 | |
| 5606 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 5607 self.assertEqual("RGB", im.mode) | |
| 5608 self.assertEqual(5, im.size[0]) | |
| 5609 self.assertEqual(5, im.size[1]) | |
| 5610 | |
| 5611 | |
| 5612 # Grayscale image | |
| 5613 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 5614 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5615 self.assertEqual("L", im.mode) | |
| 5616 self.assertEqual(288, im.size[0]) | |
| 5617 self.assertEqual(288, im.size[1]) | |
| 5618 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5619 | |
| 5620 # Those are the original windowing parameters that are written | |
| 5621 # inside the DICOM file | |
| 5622 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 5623 self.assertEqual("L", im2.mode) | |
| 5624 self.assertEqual(288, im2.size[0]) | |
| 5625 self.assertEqual(288, im2.size[1]) | |
| 5626 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 5627 | |
| 5628 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 5629 self.assertEqual("L", im.mode) | |
| 5630 self.assertEqual(512, im.size[0]) | |
| 5631 self.assertEqual(512, im.size[1]) | |
| 5632 | |
| 5633 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 5634 self.assertEqual("L", im.mode) | |
| 5635 self.assertEqual(10, im.size[0]) | |
| 5636 self.assertEqual(10, im.size[1]) | |
| 5637 | |
| 5638 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 5639 self.assertEqual("L", im.mode) | |
| 5640 self.assertEqual(10, im.size[0]) | |
| 5641 self.assertEqual(10, im.size[1]) | |
| 5642 | |
| 5643 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 5644 self.assertEqual("L", im.mode) | |
| 5645 self.assertEqual(1, im.size[0]) | |
| 5646 self.assertEqual(1, im.size[1]) | |
| 5647 self.assertEqual(255, im.getpixel((0, 0))) | |
| 5648 | |
| 5649 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 5650 self.assertEqual("L", im.mode) | |
| 5651 self.assertEqual(1, im.size[0]) | |
| 5652 self.assertEqual(1, im.size[1]) | |
| 5653 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5654 | |
| 5655 | |
| 5656 # Test monochrome 1 | |
| 5657 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 5658 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 5659 self.assertEqual("L", im.mode) | |
| 5660 self.assertEqual(2010, im.size[0]) | |
| 5661 self.assertEqual(2446, im.size[1]) | |
| 5662 self.assertEqual(0, im.getpixel((0, 0))) | |
| 5663 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 5664 self.assertEqual("L", im.mode) | |
| 5665 self.assertEqual(20, im.size[0]) | |
| 5666 self.assertEqual(24, im.size[1]) | |
| 5667 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 5668 self.assertEqual("L", im.mode) | |
| 5669 self.assertEqual(20, im.size[0]) | |
| 5670 self.assertEqual(24, im.size[1]) | |
| 5671 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 5672 self.assertEqual("L", im.mode) | |
| 5673 self.assertEqual(10, im.size[0]) | |
| 5674 self.assertEqual(12, im.size[1]) | |
| 5675 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 5676 self.assertEqual("L", im.mode) | |
| 5677 self.assertEqual(20, im.size[0]) | |
| 5678 self.assertEqual(24, im.size[1]) | |
|
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5679 |
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5680 |
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5681 def test_bitbucket_issue_154(self): |
|
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5682 # "Matching against list of UID-s by C-MOVE" |
| 319 | 5683 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
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5684 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
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5685 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
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5686 |
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5687 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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5688 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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5689 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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5690 |
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5691 # C-FIND is working on list of UIDs |
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5692 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
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5693 '-k', 'StudyInstanceUID=%s' % study, |
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5694 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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5695 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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5696 self.assertEqual(2, len(series)) |
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5697 self.assertTrue(series1 in series) |
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5698 self.assertTrue(series2 in series) |
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5699 |
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5700 # Individual retrieval is working in Orthanc < 1.6.0 |
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5701 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5702 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5703 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5704 '-k', 'StudyInstanceUID=%s' % study, |
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5705 '-k', 'SeriesInstanceUID=%s' % series1, |
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5706 ]))) |
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5707 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5708 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5709 '-k', 'StudyInstanceUID=%s' % study, |
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5710 '-k', 'SeriesInstanceUID=%s' % series2, |
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5711 ]))) |
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5712 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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5713 |
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5714 DropOrthanc(_LOCAL) |
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5715 |
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5716 # But list matching is working only in Orthanc >= 1.6.0 |
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5717 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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5718 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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5719 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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5720 '-k', 'StudyInstanceUID=%s' % study, |
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5721 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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5722 ]))) |
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5723 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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5724 |
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5725 |
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5726 def test_storage_commitment_api(self): |
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5727 # Storage commitment is available since Orthanc 1.6.0 |
|
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5728 |
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5729 def WaitTransaction(uid): |
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5730 while True: |
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5731 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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5732 if s['Status'] != 'Pending': |
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5733 return s |
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5734 else: |
|
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5735 time.sleep(0.01) |
|
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5736 |
| 281 | 5737 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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5738 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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5739 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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5740 |
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5741 # Against self |
| 281 | 5742 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5743 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 5744 }) ['ID'] | |
|
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5745 self.assertTrue(transaction.startswith('2.25.')) |
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5746 |
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5747 result = WaitTransaction(transaction) |
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|
5748 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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|
5749 self.assertEqual('Success', result['Status']) |
|
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|
5750 self.assertEqual(1, len(result['Success'])) |
|
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|
5751 self.assertEqual(0, len(result['Failures'])) |
|
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|
5752 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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|
5753 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
|
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|
5754 |
| 281 | 5755 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5756 "DicomInstances" : [ | |
| 5757 { 'SOPClassUID' : sopClassUid, | |
| 5758 'SOPInstanceUID' : sopInstanceUid }, | |
| 5759 ], | |
| 5760 }) | |
| 5761 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 5762 self.assertEqual(result, WaitTransaction(transaction)) | |
| 5763 | |
| 5764 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 5765 "Resources" : [ | |
| 5766 instance['ID'], | |
| 5767 instance['ParentSeries'], | |
| 5768 instance['ParentStudy'], | |
| 5769 instance['ParentPatient'], | |
| 5770 ] | |
| 5771 }) | |
|
280
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|
5772 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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|
5773 self.assertEqual(result, WaitTransaction(transaction)) |
|
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changeset
|
5774 |
|
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|
5775 |
| 281 | 5776 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 5777 "DicomInstances" : [ | |
| 5778 [ 'nope', 'nope2' ], | |
| 5779 [ sopClassUid, sopInstanceUid ], | |
| 5780 ], | |
| 5781 }) ['ID'] | |
|
279
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|
5782 self.assertTrue(transaction.startswith('2.25.')) |
|
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|
5783 |
|
280
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|
5784 result = WaitTransaction(transaction) |
|
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|
5785 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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|
5786 self.assertEqual('Failure', result['Status']) |
|
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|
5787 self.assertEqual(1, len(result['Success'])) |
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changeset
|
5788 self.assertEqual(1, len(result['Failures'])) |
|
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diff
changeset
|
5789 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
|
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diff
changeset
|
5790 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
|
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diff
changeset
|
5791 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
|
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|
5792 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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|
5793 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
|
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changeset
|
5794 |
|
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changeset
|
5795 # Cannot remove items from a failed storage commitment transaction |
|
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diff
changeset
|
5796 self.assertRaises(Exception, lambda: |
|
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changeset
|
5797 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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diff
changeset
|
5798 |
|
279
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diff
changeset
|
5799 |
|
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changeset
|
5800 # Against Orthanc 0.8.6, that does not support storage commitment |
|
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diff
changeset
|
5801 self.assertRaises(Exception, lambda: |
| 281 | 5802 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
| 5803 "DicomInstances" : [ | |
| 5804 [ sopClassUid, sopInstanceUid ], | |
| 5805 ] | |
| 5806 })) | |
|
279
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changeset
|
5807 |
|
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diff
changeset
|
5808 |
|
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diff
changeset
|
5809 |
|
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diff
changeset
|
5810 def test_storage_commitment_store(self): |
|
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5811 # Storage commitment is available since Orthanc 1.6.0 |
|
280
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changeset
|
5812 |
|
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changeset
|
5813 def WaitTransaction(uid): |
|
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diff
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|
5814 while True: |
|
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changeset
|
5815 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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changeset
|
5816 if s['Status'] != 'Pending': |
|
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diff
changeset
|
5817 return s |
|
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diff
changeset
|
5818 else: |
|
342
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diff
changeset
|
5819 time.sleep(0.01) |
|
280
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diff
changeset
|
5820 |
|
279
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diff
changeset
|
5821 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
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diff
changeset
|
5822 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
5823 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
5824 |
|
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diff
changeset
|
5825 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
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diff
changeset
|
5826 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
5827 'Resources' : [ i ], |
|
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|
5828 'StorageCommitment' : True, |
|
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diff
changeset
|
5829 })) |
|
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diff
changeset
|
5830 |
|
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diff
changeset
|
5831 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
5832 'Resources' : [ i ], |
|
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changeset
|
5833 'StorageCommitment' : False, |
|
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diff
changeset
|
5834 }) |
|
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diff
changeset
|
5835 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
5836 |
|
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diff
changeset
|
5837 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
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diff
changeset
|
5838 'Resources' : [ i ], |
|
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changeset
|
5839 'StorageCommitment' : True, |
|
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diff
changeset
|
5840 }) |
|
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diff
changeset
|
5841 |
|
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diff
changeset
|
5842 transaction = j['StorageCommitmentTransactionUID'] |
|
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diff
changeset
|
5843 self.assertTrue(transaction.startswith('2.25.')) |
|
280
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diff
changeset
|
5844 |
|
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diff
changeset
|
5845 result = WaitTransaction(transaction) |
|
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diff
changeset
|
5846 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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diff
changeset
|
5847 self.assertEqual('Success', result['Status']) |
|
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diff
changeset
|
5848 self.assertEqual(1, len(result['Success'])) |
|
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diff
changeset
|
5849 self.assertEqual(0, len(result['Failures'])) |
|
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changeset
|
5850 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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changeset
|
5851 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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diff
changeset
|
5852 result['Success'][0]['SOPInstanceUID']) |
|
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diff
changeset
|
5853 |
|
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diff
changeset
|
5854 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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changeset
|
5855 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
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diff
changeset
|
5856 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
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changeset
|
5857 |
|
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changeset
|
5858 |
|
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diff
changeset
|
5859 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
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changeset
|
5860 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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changeset
|
5861 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
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|
5862 |
|
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changeset
|
5863 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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|
5864 dicom = f.read() |
|
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|
5865 |
|
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changeset
|
5866 self.assertRaises(Exception, lambda: DoPost( |
|
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changeset
|
5867 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
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|
5868 |
|
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changeset
|
5869 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
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changeset
|
5870 |
|
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changeset
|
5871 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
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changeset
|
5872 answer['SOPClassUID']) |
|
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|
5873 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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changeset
|
5874 answer['SOPInstanceUID']) |
|
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|
5875 |
|
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changeset
|
5876 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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changeset
|
5877 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
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|
5878 |
|
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|
5879 |
|
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changeset
|
5880 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
5881 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5882 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5883 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5884 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5885 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5886 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5887 # Export the instance, with transcoding: "_REMOTE" is the |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5888 # Orthanc server being tested |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5889 try: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5890 DoDelete(_REMOTE, '/modalities/toto') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5891 except: |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5892 pass |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5893 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5894 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5895 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5896 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5897 j = DoGet(_LOCAL, '/instances') |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5898 self.assertEqual(1, len(j)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5899 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5900 self.assertTrue(uncompressedSize > rleSize / 2) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5901 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5902 # Export, with transcoding disabled => this fails |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5903 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5904 DoPut(_REMOTE, '/modalities/toto', params) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5905 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
5906 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5907 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5908 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5909 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5910 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5911 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5912 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5913 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5914 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5915 self.assertEqual(44350560, len(dicom)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5916 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5917 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5918 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5919 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5920 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5921 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5922 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5923 j = DoGet(_LOCAL, '/instances') |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5924 self.assertEqual(1, len(j)) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5925 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5926 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5927 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5928 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5929 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5930 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5931 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5932 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5933 # because of this transcoding |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5934 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5935 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5936 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5937 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5938 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5939 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5940 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5941 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5942 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5943 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5944 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5945 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5946 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5947 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5948 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
5949 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5950 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5951 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5952 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5953 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5954 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5955 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5956 |
| 304 | 5957 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5958 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5959 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5960 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5961 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5962 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5963 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5964 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5965 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5966 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5967 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5968 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5969 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5970 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5971 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5972 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5973 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5974 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5975 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5976 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5977 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5978 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5979 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5980 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5981 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5982 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5983 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5984 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5985 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5986 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5987 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5988 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5989 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5990 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5991 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5992 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5993 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5994 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5995 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5996 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5997 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5998 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5999 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6000 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6001 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6002 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6003 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6004 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6005 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6006 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6007 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6008 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6009 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6010 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6011 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6012 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6013 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6014 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6015 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6016 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6017 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6018 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6019 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6020 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6021 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6022 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6023 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6024 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6025 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6026 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6027 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6028 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6029 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6030 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6031 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6032 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6033 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6034 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6035 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6036 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6037 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6038 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6039 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6040 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6041 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6042 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6043 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6044 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6045 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6046 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6047 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6048 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6049 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6050 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6051 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6052 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6053 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6054 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6055 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6056 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6057 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6058 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6059 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6060 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6061 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6062 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6063 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6064 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6065 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6066 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6067 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6068 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6069 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6070 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6071 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6072 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6073 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6074 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6075 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6076 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6077 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6078 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6079 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6080 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6081 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6082 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6083 |
| 308 | 6084 |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6085 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6086 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6087 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6088 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6089 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6090 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6091 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6092 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6093 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6094 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6095 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6096 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6097 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6098 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6099 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6100 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6101 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6102 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6103 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6104 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6105 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6106 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6107 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6108 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6109 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6110 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6111 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6112 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6113 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6114 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6115 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6116 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6117 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6118 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6119 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6120 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6121 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6122 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6123 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6124 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6125 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6126 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6127 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6128 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6129 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6130 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6131 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6132 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6133 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6134 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6135 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6136 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6137 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6138 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6139 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6140 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6141 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6142 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6143 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6144 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6145 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6146 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6147 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6148 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6149 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6150 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6151 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6152 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6153 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6154 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6155 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6156 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6157 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6158 for syntax in SYNTAXES: |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6159 body = { |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6160 'Resources' : [ i ], |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6161 } |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6162 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6163 if syntax != '1.2.840.10008.1.2.1': |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6164 body['Transcode'] = syntax |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6165 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6166 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6167 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6168 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6169 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6170 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6171 self.assertEqual(syntax, GetTransferSyntax( |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6172 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6173 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6174 DropOrthanc(_LOCAL) |
| 308 | 6175 |
| 6176 | |
| 295 | 6177 def test_getscu(self): |
| 307 | 6178 def CleanTarget(): |
| 6179 if os.path.isdir('/tmp/GETSCU'): | |
| 6180 shutil.rmtree('/tmp/GETSCU') | |
| 6181 os.makedirs('/tmp/GETSCU') | |
| 6182 | |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
6183 env = {} |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6184 if _DOCKER: |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
6185 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6186 # and running in a GNU/Linux distribution running DCMTK |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
6187 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6188 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
6189 |
| 295 | 6190 # no transcoding required |
| 307 | 6191 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 6192 | |
| 6193 CleanTarget() | |
| 295 | 6194 |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6195 subprocess.check_call([ |
|
da2be3ff2db5
fix getscu binaries
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parents:
296
diff
changeset
|
6196 FindExecutable('getscu'), |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
6197 _REMOTE['Server'], |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
6198 str(_REMOTE['DicomPort']), |
|
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6199 '-aec', 'ORTHANC', |
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6200 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 6201 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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6202 '-k', '0008,0052=STUDY', |
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6203 '--output-directory', '/tmp/GETSCU/' |
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6204 ], env = env) |
| 295 | 6205 |
| 311 | 6206 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 6207 self.assertTrue(os.path.isfile(f1)) | |
| 6208 with open(f1, 'rb') as f: | |
| 6209 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6210 | |
| 307 | 6211 CleanTarget() |
| 295 | 6212 |
| 6213 # transcoding required | |
| 311 | 6214 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 6215 |
| 6216 subprocess.check_call([ | |
| 6217 FindExecutable('getscu'), | |
| 6218 _REMOTE['Server'], | |
| 6219 str(_REMOTE['DicomPort']), | |
| 6220 '-aec', 'ORTHANC', | |
| 6221 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 6222 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 6223 '-k', '0008,0052=STUDY', |
| 6224 '--output-directory', '/tmp/GETSCU/' | |
| 6225 ], env = env) | |
| 6226 | |
| 311 | 6227 self.assertTrue(os.path.isfile(f1)) |
| 6228 with open(f1, 'rb') as f: | |
| 6229 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
| 6230 | |
| 6231 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 6232 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 6233 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 6234 self.assertTrue(os.path.isfile(f2)) | |
| 6235 with open(f2, 'rb') as f: | |
| 6236 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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6237 |
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6238 |
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6239 def test_findscu_truncation(self): |
|
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6240 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
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6241 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
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6242 UploadInstance(_REMOTE, 'Multiframe.dcm') |
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6243 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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6244 |
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6245 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
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6246 |
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6247 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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6248 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6249 self.assertEqual(2, len(result)) |
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6250 |
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6251 # The "StudyInstanceUID" is set as a list of 5 times the same |
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6252 # study, leading to a string of 249 characters |
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6253 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
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6254 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
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6255 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
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6256 self.assertEqual(1, len(result)) |
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6257 |
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6258 # The "StudyInstanceUID" is set as a list of 6 times the same |
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6259 # study, leading to a string of 299 characters. In Orthanc <= |
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6260 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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6261 # == 256, and is thus wiped out by C-FIND SCP. As a |
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6262 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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6263 # "StudyInstanceUID" and returns all the available |
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6264 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
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6265 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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6266 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
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6267 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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6268 self.assertEqual(1, len(result)) |
|
328
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6269 |
|
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|
6270 |
|
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|
6271 def test_store_compressed(self): |
|
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6272 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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6273 dicom = f.read() |
|
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6274 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
|
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6275 sourceSize = len(dicom) |
|
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6276 |
|
328
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6277 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6278 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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6279 |
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6280 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
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6281 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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6282 _REMOTE, '/peers/peer/store', { |
|
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6283 'Resources' : [ i ], |
|
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6284 'Synchronous' : False, |
|
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|
6285 })) |
|
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|
6286 |
|
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|
6287 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
6288 self.assertFalse(job['Content']['Compress']) |
|
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6289 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
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|
6290 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
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|
6291 |
|
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6292 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
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|
6293 DropOrthanc(_LOCAL) |
|
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6294 |
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6295 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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6296 # Not supported by Orthanc 0.8.6 => failure |
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6297 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
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6298 'Resources' : [ i ], |
|
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6299 'Compress' : True, |
|
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6300 })) |
|
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6301 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
6302 |
|
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6303 # Sending to the tested remote server, with compression: OK |
|
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6304 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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6305 _REMOTE, '/peers/self/store', { |
|
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6306 'Resources' : [ i ], |
|
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6307 'Compress' : True, |
|
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6308 'Synchronous' : False, |
|
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|
6309 })) |
|
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|
6310 |
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|
6311 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
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6312 self.assertTrue(job['Content']['Compress']) |
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6313 |
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6314 # Compression must have divided the size of the sent data at least twice |
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6315 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 6316 |
| 6317 | |
| 6318 def test_move_ambra(self): | |
| 6319 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 6320 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 6321 | |
| 6322 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 6323 | |
| 6324 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6325 '--study', | |
| 6326 '-k', 'StudyInstanceUID=' | |
| 6327 ]))) | |
| 6328 | |
| 6329 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6330 '--study', | |
| 6331 '-k', 'AccessionNumber=', | |
| 6332 ]))) | |
| 6333 | |
| 6334 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6335 '--study', | |
| 6336 '-k', 'AccessionNumber=', | |
| 6337 '-k', 'StudyInstanceUID=' | |
| 6338 ]))) | |
| 6339 | |
| 6340 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6341 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6342 '--study', | |
| 6343 '-k', 'AccessionNumber=CT16000988', | |
| 6344 '-k', 'StudyInstanceUID=', | |
| 6345 ]))) | |
| 6346 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6347 DropOrthanc(_LOCAL) | |
| 6348 | |
| 6349 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6350 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6351 '--study', | |
| 6352 '-k', 'AccessionNumber=CT16000988', | |
| 6353 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 6354 ]))) | |
| 6355 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6356 DropOrthanc(_LOCAL) | |
| 6357 | |
| 6358 # This fails on Orthanc <= 1.7.3 | |
| 6359 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 6360 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 6361 '--study', | |
| 6362 '-k', 'AccessionNumber=', | |
| 6363 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 6364 ]))) | |
| 6365 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 6366 DropOrthanc(_LOCAL) | |
|
333
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|
6367 |
|
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diff
changeset
|
6368 |
|
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diff
changeset
|
6369 def test_decode_elscint(self): |
|
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diff
changeset
|
6370 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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diff
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|
6371 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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diff
changeset
|
6372 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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diff
changeset
|
6373 |
|
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diff
changeset
|
6374 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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diff
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|
6375 self.assertEqual("L", im.mode) |
|
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|
6376 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
6377 self.assertEqual(512, im.size[1]) |
|
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diff
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|
6378 |
|
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diff
changeset
|
6379 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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diff
changeset
|
6380 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
6381 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
6382 self.assertEqual(512, im.size[1]) |
|
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diff
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|
6383 |
|
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diff
changeset
|
6384 # The two tests below fail on Orthanc <= 1.7.3 |
|
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|
6385 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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changeset
|
6386 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6387 |
|
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diff
changeset
|
6388 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
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diff
changeset
|
6389 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
6390 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6391 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6392 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
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diff
changeset
|
6393 # Problem reported by Alain Mazy on 2020-09-15 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6394 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
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diff
changeset
|
6395 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6396 |
|
335
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diff
changeset
|
6397 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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diff
changeset
|
6398 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
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diff
changeset
|
6399 self.assertEqual(1, len(modalitiesInStudy)) |
|
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diff
changeset
|
6400 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
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diff
changeset
|
6401 |
|
96718de2f29c
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diff
changeset
|
6402 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
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diff
changeset
|
6403 # The empty string '' corresponds to universal matching. |
|
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diff
changeset
|
6404 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
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diff
changeset
|
6405 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
6406 if i in [ 'UX', 'UX\\MR' ]: |
|
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diff
changeset
|
6407 expected = 0 |
|
96718de2f29c
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changeset
|
6408 else: |
|
96718de2f29c
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diff
changeset
|
6409 expected = 1 |
|
96718de2f29c
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diff
changeset
|
6410 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6411 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6412 'Query' : { 'ModalitiesInStudy' : i }}) |
|
335
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diff
changeset
|
6413 self.assertEqual(expected, len(a)) |
|
334
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test_rest_modalities_in_study_2
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diff
changeset
|
6414 |
|
971ff285302b
test_rest_modalities_in_study_2
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parents:
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diff
changeset
|
6415 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
6416 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
335
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diff
changeset
|
6417 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
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diff
changeset
|
6418 |
|
ec13ace43bde
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335
diff
changeset
|
6419 |
|
ec13ace43bde
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diff
changeset
|
6420 def test_webdav(self): |
|
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diff
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|
6421 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
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diff
changeset
|
6422 |
|
342
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diff
changeset
|
6423 for suffix in [ '', '/' ]: |
|
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diff
changeset
|
6424 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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changeset
|
6425 self.assertEqual(1, len(f)) |
|
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diff
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|
6426 self.assertTrue('/webdav/' in f.keys()) |
|
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diff
changeset
|
6427 self.assertTrue(f['/webdav/']['folder']) |
|
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changeset
|
6428 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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changeset
|
6429 |
|
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diff
changeset
|
6430 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
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diff
changeset
|
6431 self.assertEqual(6, len(f)) |
|
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changeset
|
6432 self.assertTrue(f['/webdav/']['folder']) |
|
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changeset
|
6433 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
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diff
changeset
|
6434 |
|
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diff
changeset
|
6435 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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changeset
|
6436 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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diff
changeset
|
6437 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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diff
changeset
|
6438 |
|
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341
diff
changeset
|
6439 for depth in [ 0, 1 ]: |
|
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diff
changeset
|
6440 for suffix2 in [ '', '/' ]: |
|
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diff
changeset
|
6441 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
changeset
|
6442 |
|
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diff
changeset
|
6443 if i == 'uploads': |
|
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|
6444 # Empty folders might still exist in "/uploads/" |
|
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|
6445 self.assertTrue('/webdav/uploads/' in g) |
|
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changeset
|
6446 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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changeset
|
6447 for j in g.items(): |
|
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changeset
|
6448 self.assertTrue(g.items()[0][1]['folder']) |
|
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|
6449 else: |
|
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changeset
|
6450 self.assertEqual(1, len(g)) |
|
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diff
changeset
|
6451 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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changeset
|
6452 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
changeset
|
6453 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
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|
6454 |
|
342
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changeset
|
6455 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
6456 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
6457 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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changeset
|
6458 |
|
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diff
changeset
|
6459 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
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diff
changeset
|
6460 time.sleep(0.01) |
|
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diff
changeset
|
6461 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
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changeset
|
6462 |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
6463 |
|
698898a93a10
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diff
changeset
|
6464 def test_log_categories(self): |
| 350 | 6465 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
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|
6466 |
| 350 | 6467 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 6468 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
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|
6469 DoGet(_REMOTE, '/system') |
|
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changeset
|
6470 |
| 350 | 6471 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 6472 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6473 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6474 |
| 350 | 6475 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 6476 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6477 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6478 |
| 350 | 6479 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6480 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6481 # Switch back to the original log level |
| 350 | 6482 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 6483 | |
| 6484 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6485 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6486 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6487 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 6488 |
| 6489 | |
| 6490 def test_upload_zip(self): | |
| 6491 f = StringIO() | |
| 6492 with zipfile.ZipFile(f, 'w') as z: | |
| 6493 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 6494 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 6495 c = g.read() | |
| 6496 z.writestr('hello/world/dicom1.dcm', c) | |
| 6497 z.writestr('hello/world/dicom2.dcm', c) | |
| 6498 | |
| 6499 f.seek(0) | |
| 6500 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 6501 | |
| 6502 self.assertEqual(2, len(i)) | |
| 6503 self.assertEqual(i[0], i[1]) | |
| 6504 self.assertEqual(6, len(i[0])) | |
| 6505 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 6506 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 6507 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 6508 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 6509 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 6510 | |
| 6511 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 6512 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6513 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6514 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6515 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6516 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6517 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6518 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6519 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6520 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6521 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6522 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6523 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6524 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6525 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6526 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6527 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6528 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6529 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6530 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6531 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6532 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6533 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6534 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6535 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6536 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6537 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6538 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6539 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6540 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6541 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6542 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6543 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6544 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6545 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6546 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6547 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6548 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6549 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6550 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6551 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6552 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6553 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6554 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6555 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6556 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6557 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6558 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6559 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6560 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6561 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6562 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6563 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6564 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6565 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6566 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6567 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6568 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6569 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6570 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6571 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6572 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6573 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6574 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6575 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6576 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6577 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6578 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6579 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6580 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6581 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6582 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6583 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6584 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6585 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6586 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6587 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6588 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6589 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6590 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6591 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6592 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6593 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6594 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6595 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6596 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6597 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6598 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6599 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6600 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6601 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6602 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6603 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6604 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6605 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6606 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6607 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6608 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6609 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6610 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6611 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6612 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6613 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6614 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6615 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6616 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6617 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6618 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6619 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6620 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6621 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6622 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6623 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6624 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6625 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6626 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6627 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6628 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6629 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6630 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6631 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6632 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6633 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6634 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6635 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6636 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6637 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6638 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6639 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6640 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6641 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6642 self.assertEqual(3, len(peer)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6643 self.assertEqual(5, peer['DatabaseVersion']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6644 self.assertEqual('MyOrthanc', peer['Name']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6645 self.assertEqual('0.8.6', peer['Version']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6646 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6647 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6648 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6649 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6650 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6651 # "ParentStudy", "ParentSeries" are not reported |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6652 self.assertEqual(3, len(j)) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6653 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6654 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6655 self.assertEqual('Success', j['Status']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6656 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6657 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
6658 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 6659 |
| 6660 | |
| 6661 def test_cp246(self): | |
| 6662 # This fails on Orthanc <= 1.9.0 | |
| 6663 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 6664 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 6665 | |
| 6666 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 6667 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 6668 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 6669 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 6670 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 6671 | |
| 6672 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 6673 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 6674 | |
| 6675 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 6676 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 6677 | |
| 6678 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 6679 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 6680 | |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6681 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
6682 def test_revisions_metadata(self): |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6683 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6684 # was introduced in 1.9.2), or if configuration option |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6685 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6686 # related to revisions mimic CouchDB: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6687 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6688 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6689 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6690 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6691 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6692 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6693 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6694 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6695 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6696 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6697 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6698 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6699 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6700 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6701 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6702 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6703 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6704 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6705 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6706 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6707 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6708 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6709 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6710 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6711 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6712 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6713 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6714 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6715 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6716 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6717 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6718 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6719 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6720 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6721 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6722 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6723 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6724 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6725 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6726 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6727 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6728 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6729 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6730 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6731 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6732 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6733 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6734 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6735 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6736 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6737 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6738 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6739 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6740 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6741 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6742 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6743 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6744 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6745 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6746 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6747 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6748 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6749 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6750 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6751 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6752 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6753 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6754 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6755 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6756 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6757 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6758 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6759 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6760 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6761 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6762 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6763 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6764 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6765 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6766 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6767 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6768 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6769 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6770 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6771 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6772 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6773 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6774 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6775 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6776 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6777 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6778 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6779 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6780 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6781 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6782 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6783 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6784 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6785 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6786 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6787 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6788 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6789 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6790 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6791 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6792 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6793 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6794 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6795 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6796 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6797 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6798 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6799 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6800 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6801 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6802 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6803 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6804 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6805 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6806 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6807 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6808 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6809 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6810 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6811 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6812 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6813 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6814 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6815 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6816 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6817 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6818 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6819 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6820 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6821 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6822 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6823 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6824 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6825 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6826 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6827 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6828 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6829 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6830 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6831 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6832 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6833 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6834 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6835 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6836 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6837 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6838 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6839 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
6840 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6841 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6842 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6843 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6844 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6845 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6846 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6847 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6848 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6849 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6850 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6851 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6852 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6853 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6854 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6855 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6856 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6857 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6858 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6859 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6860 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6861 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6862 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6863 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6864 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6865 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6866 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6867 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6868 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6869 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6870 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6871 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6872 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6873 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6874 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6875 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6876 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6877 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6878 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6879 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6880 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6881 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6882 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6883 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6884 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6885 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6886 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6887 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6888 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6889 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6890 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6891 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6892 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6893 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6894 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6895 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6896 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6897 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6898 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6899 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6900 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6901 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6902 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6903 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6904 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6905 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6906 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6907 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6908 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6909 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6910 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6911 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6912 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6913 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6914 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6915 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6916 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6917 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6918 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6919 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6920 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6921 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6922 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6923 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6924 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6925 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6926 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6927 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6928 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6929 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6930 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6931 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6932 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6933 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6934 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6935 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6936 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6937 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6938 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6939 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6940 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6941 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6942 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6943 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6944 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6945 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6946 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6947 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6948 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6949 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6950 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6951 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6952 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6953 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6954 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6955 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6956 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6957 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6958 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6959 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6960 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6961 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6962 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6963 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6964 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6965 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6966 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6967 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6968 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6969 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6970 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6971 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6972 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6973 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6974 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6975 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6976 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6977 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6978 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6979 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6980 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6981 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6982 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6983 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6984 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6985 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6986 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6987 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6988 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6989 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6990 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6991 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6992 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6993 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6994 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6995 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
6996 |
|
3019306499c5
test_revisions_attachments
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parents:
392
diff
changeset
|
6997 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
6998 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
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diff
changeset
|
6999 }) |
|
3019306499c5
test_revisions_attachments
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parents:
392
diff
changeset
|
7000 self.assertEqual('200', headers['status']) |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
7001 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7002 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7003 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7004 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7005 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7006 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7007 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7008 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7009 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7010 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7011 # This fails on Orthanc <= 1.9.2 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7012 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7013 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7014 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7015 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7016 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7017 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7018 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7019 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7020 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7021 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7022 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7023 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7024 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7025 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7026 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7027 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7028 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7029 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7030 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7031 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7032 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7033 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7034 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7035 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7036 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7037 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7038 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7039 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7040 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7041 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7042 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7043 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7044 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7045 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7046 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7047 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7048 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7049 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7050 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7051 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7052 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7053 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7054 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7055 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7056 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7057 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7058 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7059 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7060 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7061 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7062 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7063 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7064 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7065 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7066 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7067 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7068 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7069 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7070 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7071 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7072 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7073 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7074 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7075 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7076 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7077 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7078 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7079 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7080 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7081 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7082 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7083 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7084 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7085 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7086 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7087 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7088 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7089 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7090 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7091 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
7092 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 7093 |
| 7094 | |
| 7095 def test_issue_146(self): | |
| 7096 # "Update Anonyization to 2019c" | |
| 7097 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 | |
| 7098 | |
| 7099 def GetTags(study, params): | |
| 7100 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 7101 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 7102 self.assertEqual(1, len(b)) | |
| 7103 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 7104 | |
| 7105 | |
| 7106 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 7107 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 7108 | |
| 7109 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 7110 | |
| 7111 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 7112 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 7113 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
| 7114 tagsDefault = GetTags(study, {}) | |
| 7115 | |
| 420 | 7116 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 7117 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 7118 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 7119 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
| 405 | 7120 self.assertEqual(tagsDefault['0012,0063'], tags2021b['0012,0063']) |
| 7121 | |
| 7122 for t in [ tags2008, tags2017c, tags2021b, tagsDefault ]: | |
| 7123 self.assertTrue(t['0010,0010'].startswith('Anonymized')) | |
| 7124 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 7125 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 7126 self.assertEqual('YES', t['0012,0062']) | |
| 7127 | |
| 7128 for t in [ tags2008 ]: | |
| 7129 self.assertEqual('20200101', t['0008,0020']) | |
| 7130 | |
| 7131 for t in [ tags2017c, tags2021b, tagsDefault ]: | |
| 7132 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c | |
| 7133 | |
| 7134 for t in [ tags2008, tags2017c ]: | |
| 7135 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 7136 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 7137 | |
| 7138 for t in [ tags2021b, tagsDefault ]: | |
| 7139 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c | |
| 7140 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7141 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7142 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7143 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7144 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7145 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7146 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7147 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7148 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7149 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7150 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7151 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7152 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7153 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7154 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7155 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7156 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7157 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7158 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7159 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7160 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7161 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7162 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7163 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7164 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7165 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7166 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7167 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7168 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7169 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
7170 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7171 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7172 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7173 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7174 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7175 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7176 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7177 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7178 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7179 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7180 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7181 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7182 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7183 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7184 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7185 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7186 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7187 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7188 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7189 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7190 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7191 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7192 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7193 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7194 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7195 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7196 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7197 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7198 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7199 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7200 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7201 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7202 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7203 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7204 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7205 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7206 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7207 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7208 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7209 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7210 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7211 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7212 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7213 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7214 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7215 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7216 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7217 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7218 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7219 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7220 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7221 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7223 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7224 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7225 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7226 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7227 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7228 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7229 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7230 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7231 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7232 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7233 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7234 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7235 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7236 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7237 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7238 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7239 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7240 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7241 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7242 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7243 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7244 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7245 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7246 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7247 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7248 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7249 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7250 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7251 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7252 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7253 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7254 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7255 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
7256 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7257 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7258 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7259 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7260 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7261 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7262 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7263 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7264 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7265 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7266 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7267 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7268 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7269 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7270 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7271 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7272 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7273 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7274 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7275 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7276 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7277 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7278 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7279 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7280 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7281 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7282 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7283 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7284 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7285 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7286 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7287 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7288 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7289 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7290 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7291 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7292 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7293 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7294 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7295 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7296 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7297 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7298 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7299 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7300 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7301 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7302 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7303 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7304 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7305 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7306 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
7307 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7308 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7309 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7310 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7311 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7312 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7313 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7314 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7315 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7316 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7317 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7318 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7319 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7320 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7321 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7322 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7323 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
7324 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 7325 |
| 7326 | |
| 7327 def test_bulk_modify(self): | |
| 7328 # New in Orthanc 1.9.4 | |
| 7329 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7330 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7331 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 7332 if expectedCount != None: |
| 7333 self.assertEqual(expectedCount, len(m)) | |
| 7334 return m | |
| 7335 | |
| 7336 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 7337 series = DoGet(_REMOTE, '/series') [0] | |
| 7338 study = DoGet(_REMOTE, '/studies') [0] | |
| 7339 patient = DoGet(_REMOTE, '/patients') [0] | |
| 7340 | |
| 7341 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7342 'Resources' : [ instance ] | |
| 7343 }) | |
| 7344 | |
| 7345 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 7346 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 7347 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 7348 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 7349 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7350 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 7351 'Resources' : [ instance ] |
| 7352 }) | |
| 7353 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7354 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7355 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7356 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7357 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 7358 |
| 7359 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 7360 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 7361 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 7362 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7363 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7364 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7365 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7366 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7367 |
| 410 | 7368 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 7369 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7370 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7371 | |
| 7372 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 7373 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7374 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7375 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7376 | |
| 7377 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 7378 'Resources' : [ knee1, brainix ] | |
| 7379 }) | |
| 7380 | |
| 7381 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7382 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 7383 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 7384 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 7385 | |
| 7386 for i in GetModified(a, 'Instance', 2): | |
| 7387 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 7388 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 7389 | |
| 7390 b = GetModified(a, 'Series', 2) | |
| 7391 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 7392 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 7393 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 7394 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 7395 | |
| 7396 b = GetModified(a, 'Study', 2) | |
| 7397 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 7398 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 7399 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 7400 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 7401 | |
| 7402 b = GetModified(a, 'Patient', 2) | |
| 7403 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 7404 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 7405 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 7406 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 7407 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7408 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7409 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7410 }) |
| 410 | 7411 |
| 7412 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 7413 sourceSeries = DoGet(_REMOTE, '/series') | |
| 7414 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 7415 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 7416 self.assertEqual(4, len(sourceInstances)) | |
| 7417 self.assertEqual(4, len(sourceSeries)) | |
| 7418 self.assertEqual(3, len(sourceStudies)) | |
| 7419 self.assertEqual(3, len(sourcePatients)) | |
| 7420 | |
| 7421 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 7422 'Resources' : [ knee1, brainix ] | |
| 7423 }) | |
| 7424 | |
| 7425 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 7426 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 7427 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 7428 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 7429 | |
| 7430 for i in GetModified(a, 'Instance', 2): | |
| 7431 self.assertFalse(i in sourceInstances) | |
| 7432 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 7433 | |
| 7434 for i in GetModified(a, 'Series', 2): | |
| 7435 self.assertFalse(i in sourceSeries) | |
| 7436 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 7437 | |
| 7438 for i in GetModified(a, 'Study', 2): | |
| 7439 self.assertFalse(i in sourceStudies) | |
| 7440 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 7441 | |
| 7442 for i in GetModified(a, 'Patient', 2): | |
| 7443 self.assertFalse(i in sourcePatients) | |
| 7444 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7445 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7446 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7447 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7448 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7449 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7450 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7451 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7452 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7453 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7454 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7455 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7456 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7457 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7458 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7459 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7460 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7461 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7462 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7463 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
7464 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7465 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7466 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7467 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7468 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7469 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7470 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7471 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7472 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7473 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7474 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7475 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7476 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7477 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7478 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7479 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7480 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7481 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7482 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7483 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7484 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7485 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7486 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7487 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7488 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7489 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7490 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7491 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7492 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7493 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7494 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7495 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7496 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7497 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7498 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7499 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7500 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7501 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7502 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7503 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7504 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7505 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7506 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7507 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7508 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7509 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7510 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7511 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7512 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7513 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7514 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7515 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7516 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7517 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7518 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7519 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7520 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7521 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7522 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7523 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7524 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7525 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7526 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7527 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7528 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7529 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7530 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7531 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7532 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7533 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7534 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7535 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7536 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7537 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7538 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7539 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7540 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7541 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7542 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7543 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7544 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7545 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7546 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7547 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7548 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7549 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7550 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7551 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7552 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7553 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7554 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7555 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7556 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7557 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7558 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7559 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7560 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7561 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7562 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7563 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7564 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7565 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7566 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7567 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7568 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7569 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7570 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7571 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7572 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7573 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7574 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7575 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7576 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7577 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7578 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7579 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7580 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7581 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7582 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7583 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7584 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7585 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7586 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7587 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7588 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7589 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7590 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7591 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7592 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7593 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7594 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7595 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7596 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7597 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7598 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7599 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7600 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7601 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7602 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7603 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7604 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7605 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7606 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7607 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7608 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7609 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7610 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7611 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7612 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7613 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7614 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7615 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7616 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7617 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7618 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7619 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7620 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7621 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7622 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7623 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7624 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7625 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7626 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7627 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7628 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7629 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7630 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7631 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7632 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7633 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7634 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7635 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7636 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7637 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7638 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7639 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7640 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7641 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7642 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7643 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7644 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7645 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7646 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7647 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7648 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7649 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7650 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7651 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7652 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7653 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7654 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7655 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7656 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7657 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7658 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7659 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7660 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7661 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7662 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7663 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7664 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7665 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7666 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7667 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7668 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7669 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7670 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7671 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
7672 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 7673 |
| 7674 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 7675 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 7676 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 7677 | |
| 7678 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 7679 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 7680 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 7681 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 7682 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 7683 | |
| 7684 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 7685 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 7686 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 7687 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 7688 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 7689 | |
| 7690 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 7691 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 7692 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 7693 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 7694 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 7695 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7696 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7697 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7698 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7699 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7700 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7701 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7702 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7703 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7704 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7705 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7706 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7707 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7708 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7709 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7710 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7711 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7712 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7713 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7714 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7715 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7716 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7717 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7718 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7719 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7720 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7721 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7722 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7723 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7724 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7725 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7726 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7727 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7728 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7729 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
7730 |
| 415 | 7731 |
| 7732 def test_bulk_content(self): | |
| 7733 # New in Orthanc 1.9.4 | |
| 7734 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 7735 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 7736 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 7737 | |
| 7738 brainixHierarchy = [ | |
| 7739 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 7740 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 7741 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 7742 brainix, | |
| 7743 ] | |
| 7744 | |
| 7745 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 7746 self.assertEqual(4, len(a)) | |
| 7747 b = map(lambda x: x['ID'], a) | |
| 7748 for i in range(4): | |
| 7749 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7750 self.assertTrue('Metadata' in a[i]) |
| 415 | 7751 |
| 7752 for (level, index) in [ | |
| 7753 ('Patient', 0), | |
| 7754 ('Study', 1), | |
| 7755 ('Series', 2), | |
| 7756 ('Instance', 3), | |
| 7757 ]: | |
| 7758 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 7759 'Level' : level }) | |
| 7760 self.assertEqual(1, len(a)) | |
| 7761 self.assertEqual(level, a[0]['Type']) | |
| 7762 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7763 self.assertTrue('Metadata' in a[0]) |
| 415 | 7764 |
| 7765 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7766 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7767 'Metadata' : False }) |
| 415 | 7768 self.assertEqual(1, len(a)) |
| 7769 self.assertEqual(level, a[0]['Type']) | |
| 7770 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7771 self.assertFalse('Metadata' in a[0]) |
| 415 | 7772 |
| 7773 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 7774 self.assertEqual(3, len(a)) | |
| 7775 for item in a: | |
| 7776 self.assertEqual('Instance', item['Type']) | |
| 7777 b = map(lambda x: x['ID'], a) | |
| 7778 self.assertTrue(knee1 in b) | |
| 7779 self.assertTrue(knee2 in b) | |
| 7780 self.assertTrue(brainix in b) | |
| 7781 | |
| 7782 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 7783 'Level' : 'Series' }) | |
| 7784 self.assertEqual(2, len(a)) | |
| 7785 for item in a: | |
| 7786 self.assertEqual('Series', item['Type']) | |
| 7787 b = map(lambda x: x['ID'], a) | |
| 7788 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 7789 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 7790 | |
| 7791 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7792 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7793 'Metadata' : False }) |
| 415 | 7794 self.assertEqual(1, len(a)) |
| 7795 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 7796 self.assertEqual('Study', a[0]['Type']) | |
| 7797 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7798 self.assertFalse('Metadata' in a[0]) |
| 415 | 7799 |
| 7800 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7801 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7802 'Metadata' : True }) |
| 415 | 7803 self.assertEqual(1, len(a)) |
| 7804 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 7805 self.assertEqual('Patient', a[0]['Type']) | |
| 7806 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
7807 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7808 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7809 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7810 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7811 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7812 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
7813 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 7814 |
| 7815 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 7816 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 7817 'Level' : level }) | |
| 7818 self.assertEqual(2, len(a)) | |
| 7819 for item in a: | |
| 7820 self.assertEqual(level, item['Type']) | |
| 7821 b = map(lambda x: x['ID'], a) | |
| 7822 if level == 'Instance': | |
| 7823 self.assertTrue(knee1 in b) | |
| 7824 self.assertTrue(brainix in b) | |
| 7825 else: | |
| 7826 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 7827 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7828 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7829 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7830 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7831 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7832 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7833 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7834 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7835 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7836 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7837 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7838 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7839 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7840 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7841 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7842 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7843 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7844 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7845 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7846 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7847 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7848 |
| 417 | 7849 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 7850 'KeepSource' : False | |
| 7851 })) # Neither "Instances", nor "Series" | |
| 7852 | |
| 7853 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7854 'KeepSource' : False, | |
| 7855 'Instances' : [ ], | |
| 7856 'Series' : [ ] | |
| 7857 })) # Empty "Instances" and "Series" | |
| 7858 | |
| 7859 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7860 'Instances' : [ 'nope' ], | |
| 7861 'KeepSource' : False | |
| 7862 })) | |
| 7863 | |
| 7864 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 7865 'Series' : [ 'nope' ], | |
| 7866 'KeepSource' : False | |
| 7867 })) | |
| 7868 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7869 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7870 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7871 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7872 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7873 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7874 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7875 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7876 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7877 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7878 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7879 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7880 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7881 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7882 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7883 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7884 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7885 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7886 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7887 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
7888 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7889 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7890 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7891 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7892 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7893 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7894 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7895 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7896 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7897 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7898 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7899 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7900 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7901 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7902 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7903 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7904 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7905 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7906 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7907 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7908 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7909 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7910 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7911 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7912 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7913 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7914 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7915 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7916 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7917 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7918 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
7919 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7920 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7921 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7922 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7923 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7924 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7925 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7926 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7927 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7928 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7929 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7930 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7931 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7932 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7933 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7934 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7935 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7936 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7937 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7938 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7939 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7940 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7941 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7942 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7943 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7944 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7945 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7946 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7947 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7948 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7949 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7950 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7951 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7952 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7953 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7954 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7955 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7956 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7957 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7958 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7959 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7960 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7961 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7962 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7963 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7964 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7965 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7966 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7967 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7968 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7969 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7970 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7971 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7972 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7973 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7974 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7975 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7976 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7977 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7978 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7979 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7980 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7981 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7982 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7983 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7984 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7985 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7986 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7987 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7988 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7989 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7990 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7991 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7992 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7993 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7994 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7995 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7996 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7997 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7998 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
7999 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8000 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8001 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8002 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8003 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8004 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8005 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8006 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8007 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8008 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8009 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8010 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8011 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8012 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8013 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8014 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8015 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8016 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8017 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8018 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8019 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8020 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8021 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8022 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8023 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8024 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8025 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8026 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8027 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8028 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8029 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8030 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8031 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8032 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8033 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8034 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8035 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8036 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8037 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8038 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8039 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8040 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8041 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8042 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8043 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8044 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8045 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8046 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8047 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8048 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8049 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8050 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8051 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8052 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8053 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8054 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8055 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8056 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8057 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8058 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8059 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8060 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8061 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8062 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8063 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8064 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8065 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8066 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8067 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8068 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8069 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8070 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8071 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8072 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8073 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8074 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8075 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8076 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8077 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8078 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8079 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8080 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8081 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8082 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8083 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8084 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8085 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8086 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8087 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8088 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8089 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 8090 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 8091 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 8092 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8093 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8094 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8095 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
8096 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 8097 |
| 8098 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 8099 self.assertEqual(1, len(last)) | |
| 8100 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8101 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 8102 |
| 8103 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 8104 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 8105 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 8106 | |
| 8107 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 8108 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 8109 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 8110 | |
| 8111 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 8112 self.assertEqual(1, len(last)) | |
| 8113 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 8114 self.assertEqual('self', last[0]['RemoteModality']) | |
| 8115 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 8116 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 8117 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 8118 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 8119 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 8120 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 8121 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8122 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8123 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8124 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8125 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8126 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8127 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8128 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8129 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8130 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8131 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8132 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8133 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8134 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8135 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8136 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
8137 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8138 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8139 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8140 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8141 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8142 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8143 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8144 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8145 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8146 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8147 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8148 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8149 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8150 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8151 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8152 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8153 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8154 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8155 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8156 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8157 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8158 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8159 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8160 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8161 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8162 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8163 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8164 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8165 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8166 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8167 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8168 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8169 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8170 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8171 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8172 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8173 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8174 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8175 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8176 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8177 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8178 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8179 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8180 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8181 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8182 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8183 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8184 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8185 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8186 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8187 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8188 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8189 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8190 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8191 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8192 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8193 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8194 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8195 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8196 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8197 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8198 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8199 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8200 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8201 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8202 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8203 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8204 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8205 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8206 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8207 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8208 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8209 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8210 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8211 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8212 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8213 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8214 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8215 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8216 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8217 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8218 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8219 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8220 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8221 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8222 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8223 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8224 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8225 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
8226 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8227 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8228 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8229 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8230 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8231 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8232 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8233 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8234 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8235 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8236 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8237 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8238 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8239 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8240 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8241 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8242 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8243 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8244 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8245 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8246 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8247 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8248 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8249 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8250 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8251 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8252 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8253 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8254 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8255 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8256 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8257 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8258 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8259 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8260 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8261 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8262 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8263 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8264 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8265 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8266 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8267 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8268 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8269 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8270 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8271 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8272 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8273 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8274 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8275 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8276 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
8277 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8278 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8279 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8280 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8281 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8282 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8283 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8284 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8285 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8286 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8287 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8288 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8289 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8290 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8291 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8292 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8293 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8294 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8295 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8296 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8297 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8298 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8299 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8300 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8301 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8302 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8303 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8304 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8305 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8306 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8307 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8308 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
8309 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 8310 |
| 8311 | |
| 8312 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
8313 # New in Orthanc 1.10.0 |
| 440 | 8314 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 8315 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 8316 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8317 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 8318 |
| 8319 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 8320 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8321 self.assertEqual(numpy.float32, c.dtype) | |
| 8322 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8323 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8324 self.assertAlmostEqual(536, c.max()) |
| 440 | 8325 |
| 8326 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 8327 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8328 self.assertEqual(numpy.uint16, c.dtype) | |
| 8329 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8330 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8331 self.assertEqual(536, c.max()) |
| 440 | 8332 |
| 8333 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 8334 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8335 self.assertEqual(numpy.float32, c.dtype) | |
| 8336 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 8337 | |
| 8338 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8339 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 8340 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8341 self.assertEqual(numpy.float32, c.dtype) | |
| 8342 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8343 | |
| 8344 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 8345 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 8346 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8347 self.assertEqual(numpy.float32, c.dtype) | |
| 8348 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 8349 | |
| 8350 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 8351 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8352 self.assertEqual(1, len(c.files)) | |
| 8353 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 8354 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 8355 | |
| 8356 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 8357 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8358 self.assertEqual(numpy.float32, c.dtype) | |
| 8359 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8360 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8361 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8362 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8363 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8364 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8365 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8366 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8367 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8368 self.assertAlmostEqual(255, c.max()) |
| 440 | 8369 |
| 8370 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 8371 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8372 self.assertEqual(numpy.float32, c.dtype) | |
| 8373 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 8374 | |
| 8375 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 8376 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 8377 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 8378 self.assertEqual(numpy.float32, c.dtype) | |
| 8379 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8380 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8381 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8382 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8383 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8384 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8385 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8386 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8387 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8388 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8389 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8390 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8391 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8392 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
8393 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8394 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8395 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8396 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8397 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8398 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8399 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8400 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8401 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8402 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8403 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8404 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8405 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8406 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8407 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8408 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8409 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8410 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8411 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8412 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8413 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8414 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8415 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8416 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8417 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8418 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8419 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8420 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8421 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8422 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8423 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8424 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8425 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8426 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8427 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8428 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8429 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8430 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8431 "PatientName" : "MyName2[]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8432 "PatientID": "test_brackets2" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8433 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8434 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8435 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8436 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8437 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8438 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8439 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8440 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8441 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8442 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8443 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8444 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8445 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8446 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8447 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8448 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8449 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8450 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8451 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8452 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8453 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
8454 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8455 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8456 |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8457 def test_rest_find_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8458 # Upload instances |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8459 for i in range(2): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8460 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8461 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8462 # Patient level |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8463 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8464 'CaseSensitive' : False, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8465 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8466 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate' ], |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8467 'Expand': True |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8468 }) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8469 self.assertEqual(1, len(a)) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8470 self.assertIn('PatientName', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8471 self.assertIn('PatientID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8472 self.assertIn('PatientSex', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8473 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8474 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8475 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8476 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8477 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8478 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8479 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8480 # Study level, request patient tags too |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8481 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8482 'CaseSensitive' : False, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8483 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8484 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8485 'Expand': True |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8486 }) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8487 self.assertEqual(1, len(a)) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8488 self.assertIn('PatientName', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8489 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8490 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8491 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8492 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8493 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8494 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8495 # Series level, request patient and study tags too |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8496 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8497 'CaseSensitive' : False, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8498 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8499 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID'], |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8500 'Expand': True |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8501 }) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8502 self.assertEqual(1, len(a)) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8503 self.assertIn('PatientName', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8504 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8505 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8506 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8507 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8508 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8509 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8510 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8511 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8512 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8513 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8514 'CaseSensitive' : False, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8515 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8516 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation'], |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8517 'Expand': True |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8518 }) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8519 self.assertEqual(1, len(a)) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8520 self.assertIn('PatientName', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8521 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8522 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8523 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8524 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8525 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8526 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8527 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8528 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8529 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8530 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8531 def test_rest_find_requested_tags_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8532 # Upload instances |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8533 for i in range(2): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8534 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8535 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8536 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8537 # Patient level |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8538 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8539 'CaseSensitive' : False, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8540 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8541 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8542 'Expand': True |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8543 }) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8544 self.assertEqual(1, len(a)) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8545 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8546 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8547 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8548 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8549 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8550 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8551 # Study level |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8552 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8553 'CaseSensitive' : False, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8554 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8555 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8556 'Expand': True |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8557 }) |
|
46ae8fb09254
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Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8558 self.assertEqual(1, len(a)) |
|
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Alain Mazy <am@osimis.io>
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452
diff
changeset
|
8559 |
|
46ae8fb09254
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8560 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
8561 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) |
|
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test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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452
diff
changeset
|
8562 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) |
|
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Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8563 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) |
|
46ae8fb09254
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Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8564 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8565 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8566 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
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452
diff
changeset
|
8567 # Series level |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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diff
changeset
|
8568 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
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Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8569 'CaseSensitive' : False, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8570 'Query' : { 'PatientName' : 'BRAINIX' }, |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8571 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], |
|
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test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
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452
diff
changeset
|
8572 'Expand': True |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8573 }) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8574 self.assertEqual(1, len(a)) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8575 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8576 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8577 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8578 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8579 |
| 456 | 8580 # Instance level |
| 8581 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 8582 'CaseSensitive' : False, | |
| 8583 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 8584 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 8585 'Expand': True | |
| 8586 }) | |
| 8587 self.assertEqual(2, len(a)) | |
| 8588 | |
| 8589 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 8590 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 8591 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 8592 | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8593 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8594 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8595 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8596 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8597 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8598 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8599 # list series and request tags that are not in the default main dicom tags |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8600 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8601 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8602 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8603 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8604 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8605 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8606 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8607 # list studies and request patient and studies tags |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8608 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) |
|
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8609 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8610 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8611 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8612 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8613 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8614 # list instances and request patient, studies and series tags including tags that are not in main dicom tags |
| 456 | 8615 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8616 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8617 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8618 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8619 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8620 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8621 self.assertEqual('512', a[0]['RequestedTags']['Rows']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8622 self.assertEqual('512', a[0]['RequestedTags']['Columns']) |
| 462 | 8623 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8624 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8625 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8626 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8627 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8628 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8629 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8630 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8631 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8632 # list studies and request patient and studies tags, including ModalitiesInStudy |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8633 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8634 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8635 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
8636 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8637 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8638 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8639 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8640 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8641 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8642 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8643 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8644 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8645 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8646 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8647 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8648 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8649 # list studies and request patient and studies tags, including ModalitiesInStudy |
|
46ae8fb09254
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Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8650 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8651 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8652 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8653 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8654 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
8655 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8656 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8657 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 8658 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8659 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8660 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8661 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8662 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8663 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8664 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
8665 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |