Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 379:097329b67509
fix tests if StorageCompression is true
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Fri, 12 Feb 2021 15:52:10 +0100 |
parents | a4b8450a1158 |
children | b9adc7d06347 |
rev | line source |
---|---|
22 | 1 #!/usr/bin/env python |
2 # -*- coding: utf-8 -*- | |
3 | |
4 | |
3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
3 | 7 # Department, University Hospital of Liege, Belgium |
363
79ce0f7a9714
upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
361
diff
changeset
|
8 # Copyright (C) 2017-2021 Osimis S.A., Belgium |
3 | 9 # |
10 # This program is free software: you can redistribute it and/or | |
11 # modify it under the terms of the GNU General Public License as | |
12 # published by the Free Software Foundation, either version 3 of the | |
13 # License, or (at your option) any later version. | |
14 # | |
15 # This program is distributed in the hope that it will be useful, but | |
16 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
18 # General Public License for more details. | |
19 # | |
20 # You should have received a copy of the GNU General Public License | |
21 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
22 | |
23 | |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
24 import base64 |
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
25 import bz2 |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
26 import copy |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
27 import pprint |
14 | 28 import tempfile |
3 | 29 import unittest |
295 | 30 import shutil |
3 | 31 |
11 | 32 from PIL import ImageChops |
3 | 33 from Toolbox import * |
13 | 34 from xml.dom import minidom |
312 | 35 from datetime import datetime |
3 | 36 |
37 _LOCAL = None | |
38 _REMOTE = None | |
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
39 _DOCKER = False |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
40 |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
41 |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
42 def SetOrthancParameters(local, remote, withinDocker): |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
43 global _LOCAL, _REMOTE, _DOCKER |
3 | 44 _LOCAL = local |
45 _REMOTE = remote | |
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
46 _DOCKER = withinDocker |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
47 |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
48 |
14 | 49 def ExtractDicomTags(rawDicom, tags): |
50 with tempfile.NamedTemporaryFile(delete = True) as f: | |
51 f.write(rawDicom) | |
52 f.flush() | |
45 | 53 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
14 | 54 |
55 result = [] | |
56 for tag in tags: | |
57 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
58 if match == None: | |
59 result.append('') | |
60 else: | |
61 result.append(match.group(1)) | |
62 | |
63 return result | |
64 | |
65 | |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
66 def CompareLists(a, b): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
67 if len(a) != len(b): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
68 return False |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
69 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
70 for i in range(len(a)): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
71 d = a[i] - b[i] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
72 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
73 return False |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
74 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
75 return True |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
76 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
77 |
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
78 def CompareTags(a, b, tagsToIgnore): |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
79 for i in tagsToIgnore: |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
80 if i in a: |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
81 del a[i] |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
82 if i in b: |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
83 del b[i] |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
84 |
123 | 85 if a.keys() == b.keys(): |
86 return True | |
87 else: | |
88 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
89 return False | |
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
90 |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
91 |
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
92 def CallFindScu(args): |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
93 p = subprocess.Popen([ FindExecutable('findscu'), |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
94 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
95 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
96 stderr=subprocess.PIPE) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
97 return p.communicate()[1] |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
98 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
99 |
142 | 100 def GetMoveScuCommand(): |
101 return [ | |
102 FindExecutable('movescu'), | |
103 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
104 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
105 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
106 _REMOTE['Server'], | |
107 str(_REMOTE['DicomPort']) | |
108 ] | |
109 | |
231
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
110 |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
111 def CallMoveScu(args): |
231
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
112 try: |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
113 subprocess.check_call(GetMoveScuCommand() + args, |
318
bac7cc80f240
dicomweb: test_wado_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
315
diff
changeset
|
114 stderr = subprocess.PIPE) |
231
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
115 except subprocess.CalledProcessError as e: |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
116 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
117 # that has been introduced in DCMTK 3.6.2. This error code is |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
118 # expected by some tests that try and C-MOVE non-existing |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
119 # DICOM instances. |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
120 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
121 if e.returncode != 69: |
4087505ddfe3
catching error codes of movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
220
diff
changeset
|
122 raise e |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
123 |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
124 |
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
125 def GenerateTestSequence(): |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
126 return [ |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
127 { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
128 'StudyDescription': 'Hello^', |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
129 'ReferencedStudySequence' : [ |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
130 { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
131 'StudyDescription': 'Toto', |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
132 }, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
133 { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
134 'StudyDescription': 'Tata', |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
135 }, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
136 ] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
137 }, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
138 { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
139 'StudyDescription': 'Sébastien^', |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
140 'StudyDate' : '19700202', |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
141 } |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
142 ] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
143 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
144 |
3 | 145 class Orthanc(unittest.TestCase): |
146 def setUp(self): | |
83 | 147 if (sys.version_info >= (3, 0)): |
148 # Remove annoying warnings about unclosed socket in Python 3 | |
149 import warnings | |
150 warnings.simplefilter("ignore", ResourceWarning) | |
151 | |
3 | 152 DropOrthanc(_LOCAL) |
153 DropOrthanc(_REMOTE) | |
174 | 154 UninstallLuaCallbacks(_REMOTE) |
312 | 155 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
44
ffa542cce638
Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
43
diff
changeset
|
156 |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
157 def AssertSameImages(self, truth, url): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
158 im = GetImage(_REMOTE, url) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
159 self.assertTrue(CompareLists(truth, im.getdata())) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
160 |
3 | 161 |
162 def test_system(self): | |
177 | 163 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
164 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
165 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
166 | |
167 systemInfo = DoGet(_REMOTE, '/system') | |
168 if systemInfo["Version"] == "mainline": | |
169 print "Skipping version checks since you're currently in mainline" | |
170 return | |
171 | |
173 | 172 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
173 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) | |
174 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) | |
175 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) | |
176 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) | |
3 | 177 |
178 def test_upload(self): | |
173 | 179 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
180 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
181 | |
182 sizeDummyCT = 2472 | |
183 sizeOverwrite = 2476 | |
184 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
185 | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
186 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
3 | 187 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
188 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
183 | 189 self.assertEqual(instance, u['ID']) |
3 | 190 self.assertEqual('Success', u['Status']) |
173 | 191 |
183 | 192 if True: |
193 # New test for Orthanc 1.4.3 | |
194 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
195 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
196 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
197 | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
198 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
199 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
200 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
201 j = 0 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
202 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
203 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
204 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
205 |
173 | 206 s = sizeDummyCT + j |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
207 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
208 if isCompressed: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
209 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
210 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
211 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
212 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
213 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 214 |
3 | 215 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
216 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
217 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
218 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
219 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
220 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
221 if isCompressed: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
222 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
223 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
224 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
225 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
226 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 227 |
228 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
3 | 229 self.assertEqual('20070101', i['StudyDate']) |
173 | 230 self.assertEqual('KNIX', i['PatientName']) |
231 | |
232 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
233 # Overwriting | |
234 self.assertEqual('Success', u['Status']) | |
235 else: | |
236 self.assertEqual('AlreadyStored', u['Status']) | |
237 | |
238 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
239 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
240 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
241 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
242 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
243 | |
244 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
245 # Overwriting | |
246 self.assertEqual('Success', u['Status']) | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
247 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
248 j2 = 0 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
249 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
250 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
251 self.assertNotEqual(j, j2) |
173 | 252 s2 = sizeOverwrite + j2 |
253 self.assertNotEqual(s, s2) | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
254 if isCompressed: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
255 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
256 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
257 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
258 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
259 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
173 | 260 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
261 self.assertEqual('ANOTHER', i['PatientName']) | |
262 else: | |
263 self.assertEqual('AlreadyStored', u['Status']) | |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
264 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
265 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
3 | 266 |
5 | 267 def test_upload_2(self): |
3 | 268 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
269 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
270 self.assertEqual(i, instance['ID']) | |
271 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
272 instance['MainDicomTags']['SOPInstanceUID']) | |
273 | |
274 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
275 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
276 series['MainDicomTags']['SeriesInstanceUID']) | |
277 | |
278 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
279 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
280 study['MainDicomTags']['StudyInstanceUID']) | |
281 | |
282 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
283 self.assertEqual('ozp00SjY2xG', | |
284 patient['MainDicomTags']['PatientID']) | |
285 | |
286 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
287 self.assertEqual(2472, len(dicom)) | |
288 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
289 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
290 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
291 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
292 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
293 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
3 | 294 |
295 | |
5 | 296 def test_images(self): |
297 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
298 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
3 | 299 |
5 | 300 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
301 self.assertEqual("L", im.mode) | |
302 self.assertEqual(512, im.size[0]) | |
303 self.assertEqual(358, im.size[1]) | |
304 | |
305 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
306 self.assertEqual("L", im.mode) | |
307 self.assertEqual(512, im.size[0]) | |
308 self.assertEqual(358, im.size[1]) | |
309 | |
310 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
311 self.assertEqual(512, im.size[0]) | |
312 self.assertEqual(358, im.size[1]) | |
313 | |
314 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
315 self.assertEqual("L", im.mode) | |
316 self.assertEqual(512, im.size[0]) | |
317 self.assertEqual(358, im.size[1]) | |
318 | |
319 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
320 self.assertEqual("L", im.mode) | |
321 self.assertEqual(512, im.size[0]) | |
322 self.assertEqual(358, im.size[1]) | |
323 | |
324 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
325 self.assertEqual(512, im.size[0]) | |
326 self.assertEqual(358, im.size[1]) | |
64 | 327 |
328 # This is Little Endian Explicit | |
329 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
330 | |
6 | 331 |
332 def test_hierarchy(self): | |
333 UploadFolder(_REMOTE, 'Brainix/Epi') | |
334 UploadFolder(_REMOTE, 'Brainix/Flair') | |
335 UploadFolder(_REMOTE, 'Knee/T1') | |
336 UploadFolder(_REMOTE, 'Knee/T2') | |
337 | |
338 p = DoGet(_REMOTE, '/patients') | |
339 s = DoGet(_REMOTE, '/studies') | |
340 t = DoGet(_REMOTE, '/series') | |
341 self.assertEqual(2, len(p)) | |
342 self.assertEqual(2, len(s)) | |
343 self.assertEqual(4, len(t)) | |
344 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
345 | |
346 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
347 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
348 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
349 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
350 | |
351 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
352 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
353 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
354 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
355 | |
356 self.assertTrue(brainixPatient in p) | |
357 self.assertTrue(kneePatient in p) | |
358 self.assertTrue(brainixStudy in s) | |
359 self.assertTrue(kneeStudy in s) | |
360 self.assertTrue(brainixEpi in t) | |
361 self.assertTrue(brainixFlair in t) | |
362 self.assertTrue(kneeT1 in t) | |
363 self.assertTrue(kneeT2 in t) | |
364 | |
365 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
366 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
367 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
368 | |
369 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
370 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
371 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
372 | |
373 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
374 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
375 | |
376 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
377 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
378 | |
379 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
380 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
381 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
382 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
383 | |
384 for patient in p: | |
385 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
386 self.assertEqual(patient, study['ParentPatient']) | |
387 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
388 self.assertEqual(study['ID'], series['ParentStudy']) | |
211 | 389 self.assertEqual('Unknown', series['Status']) |
6 | 390 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
391 self.assertEqual(series['ID'], instance['ParentSeries']) | |
392 | |
393 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), | |
394 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) | |
395 | |
396 | |
397 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
398 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
399 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
400 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
401 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
402 self.assertEqual(None, r) | |
403 | |
404 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
405 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
406 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
407 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
408 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
409 self.assertEqual('Study', r['Type']) | |
410 self.assertEqual(kneeStudy, r['ID']) | |
411 | |
412 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
413 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
414 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
415 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
416 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
417 self.assertEqual('Series', r['Type']) | |
418 self.assertEqual(kneeT1, r['ID']) | |
419 | |
420 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
421 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
422 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
423 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
424 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
425 self.assertEqual(None, r) | |
426 | |
427 DropOrthanc(_REMOTE) | |
428 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
429 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
7 | 430 |
213
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
431 def test_delete_cascade(self): |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
432 # make sure deleting the last instance of a study deletes the series, study and patient |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
433 |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
434 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
435 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
436 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
437 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
438 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
439 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
440 |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
441 DoDelete(_REMOTE, '/instances/%s' % a) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
442 |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
443 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
444 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
445 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
446 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
eba6b8c38eee
added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents:
211
diff
changeset
|
447 |
7 | 448 |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
449 def test_multiframe(self): |
7 | 450 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
451 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
452 | |
453 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
454 self.assertEqual("L", im.mode) | |
455 self.assertEqual(512, im.size[0]) | |
456 self.assertEqual(512, im.size[1]) | |
457 | |
458 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
459 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
460 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
461 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
462 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
463 | |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
464 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
465 def test_changes(self): |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
466 # Check emptiness |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
467 c = DoGet(_REMOTE, '/changes') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
468 self.assertEqual(0, len(c['Changes'])) |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
469 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
470 self.assertTrue(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
471 c = DoGet(_REMOTE, '/changes?last') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
472 self.assertEqual(0, len(c['Changes'])) |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
473 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
474 self.assertTrue(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
475 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
476 # Add 1 instance |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
477 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
478 c = DoGet(_REMOTE, '/changes') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
479 begin = c['Last'] |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
480 self.assertEqual(4, len(c['Changes'])) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
481 self.assertTrue(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
482 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
483 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
484 c = DoGet(_REMOTE, '/changes?last') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
485 self.assertEqual(1, len(c['Changes'])) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
486 self.assertEqual(begin, c['Last']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
487 self.assertTrue(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
488 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
489 self.assertEqual(1, len(c['Changes'])) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
490 self.assertEqual(begin, c['Last']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
491 self.assertTrue(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
492 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
493 self.assertEqual(1, len(c['Changes'])) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
494 self.assertEqual(begin - 1, c['Last']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
495 self.assertFalse(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
496 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
497 self.assertEqual(1, len(c['Changes'])) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
498 self.assertEqual(begin - 2, c['Last']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
499 self.assertFalse(c['Done']) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
500 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
501 UploadFolder(_REMOTE, 'Knee/T1') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
502 UploadFolder(_REMOTE, 'Knee/T2') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
503 since = begin |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
504 countPatients = 0 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
505 countStudies = 0 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
506 countSeries = 0 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
507 countInstances = 0 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
508 completed = 0 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
509 while True: |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
510 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 }) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
511 since = c['Last'] |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
512 for i in c['Changes']: |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
513 if i['ResourceType'] == 'Instance': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
514 countInstances += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
515 if i['ResourceType'] == 'Patient': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
516 countPatients += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
517 if i['ResourceType'] == 'Study': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
518 countStudies += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
519 if i['ResourceType'] == 'Series': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
520 countSeries += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
521 if i['ChangeType'] == 'NewInstance': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
522 countInstances += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
523 if i['ChangeType'] == 'NewPatient': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
524 countPatients += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
525 if i['ChangeType'] == 'NewStudy': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
526 countStudies += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
527 if i['ChangeType'] == 'NewSeries': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
528 countSeries += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
529 if i['ChangeType'] == 'CompletedSeries': |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
530 completed += 1 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
531 self.assertTrue('ID' in i) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
532 self.assertTrue('Path' in i) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
533 self.assertTrue('Seq' in i) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
534 if c['Done']: |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
535 break |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
536 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
537 self.assertEqual(2 * 50, countInstances) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
538 self.assertEqual(2 * 1, countPatients) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
539 self.assertEqual(2 * 1, countStudies) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
540 self.assertEqual(2 * 2, countSeries) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
541 self.assertEqual(0, completed) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
542 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
543 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
544 def test_archive(self): |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
545 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
546 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
192 | 547 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
548 | |
549 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
550 self.assertEqual(2, len(z.namelist())) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
551 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
552 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
553 self.assertEqual(2, len(z.namelist())) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
554 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
555 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
556 self.assertEqual(1, len(z.namelist())) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
557 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
558 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
192 | 559 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
560 | |
561 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee) | |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
562 self.assertEqual(2, len(z.namelist())) |
192 | 563 |
564 z = PostArchive(_REMOTE, '/tools/create-archive', { | |
565 'Resources' : [ brainix, knee ] | |
566 }) | |
567 self.assertEqual(3, len(z.namelist())) | |
568 | |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
569 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
570 def test_media_archive(self): |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
571 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
572 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
573 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
574 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
575 self.assertEqual(3, len(z.namelist())) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
576 self.assertTrue('IMAGES/IM0' in z.namelist()) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
577 self.assertTrue('IMAGES/IM1' in z.namelist()) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
578 self.assertTrue('DICOMDIR' in z.namelist()) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
579 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
580 try: |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
581 os.remove('/tmp/DICOMDIR') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
582 except: |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
583 # The file does not exist |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
584 pass |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
585 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
586 z.extract('DICOMDIR', '/tmp') |
45 | 587 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
588 stderr = subprocess.STDOUT).split('\n') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
589 self.assertEqual(3, len(a)) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
590 self.assertTrue(a[0].startswith('Warning')) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
591 self.assertEqual('BasicDirectory', a[1]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
592 self.assertEqual('', a[2]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
593 |
45 | 594 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
595 stderr = subprocess.STDOUT).split('\n') |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
596 self.assertEqual(1, len(a)) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
597 self.assertEqual('', a[0]) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
598 |
45 | 599 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
600 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
601 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
602 |
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
603 os.remove('/tmp/DICOMDIR') |
10 | 604 |
605 | |
606 def test_protection(self): | |
607 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
608 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
609 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
610 a = DoGet(_REMOTE, '/patients')[0] | |
611 b = DoGet(_REMOTE, '/patients')[1] | |
612 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
613 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
614 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
615 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
616 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
617 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
618 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
619 | |
620 | |
12 | 621 def test_raw_tags(self): |
10 | 622 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
623 | |
624 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
625 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
626 | |
627 s = '/instances/%s/content/' % i | |
628 | |
629 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
630 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
631 | |
632 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
633 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
634 | |
635 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
636 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
637 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
638 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
639 | |
640 for i in DoGet(_REMOTE, '/instances'): | |
641 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
642 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
643 | |
644 | |
645 def test_raw_tags_mdn(self): | |
646 # Bug reported by Cyril Paulus | |
647 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
648 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
649 | |
650 | |
651 def test_modify_instance(self): | |
652 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
653 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
654 json.dumps({ | |
655 "Replace" : { | |
656 "PatientName" : "hello", | |
657 #"PatientID" : "world" | |
658 }, | |
659 "Remove" : [ "StationName" ], | |
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
660 "RemovePrivateTags" : True |
10 | 661 }), |
662 'application/json') | |
663 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
664 | |
665 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
666 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
83 | 667 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
10 | 668 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
669 | |
670 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
671 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
672 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
673 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
674 | |
675 | |
676 def test_modify_series(self): | |
677 # Upload 4 images from the same series | |
678 for i in range(4): | |
679 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
680 | |
681 origSeries = DoGet(_REMOTE, '/series')[0] | |
682 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
683 '{"Replace":{"PatientName":"Jodogne"}}', | |
684 'application/json')['ID'] | |
685 | |
686 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
687 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
688 self.assertEqual(4, len(instances)) | |
689 for i in instances: | |
690 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
691 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
692 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
693 | |
694 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
695 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
696 | |
697 | |
698 def test_modify_study(self): | |
699 # Upload 4 images from the 2 series of the same study | |
700 for i in range(4): | |
701 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
702 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
703 | |
704 origStudy = DoGet(_REMOTE, '/studies')[0] | |
705 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
706 '{"Replace":{"PatientName":"Jodogne"}}', | |
707 'application/json')['ID'] | |
708 | |
709 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
710 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
711 self.assertEqual(2, len(series)) | |
712 for s in series: | |
713 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
714 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
715 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
716 | |
717 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
718 for i in instances: | |
719 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
720 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
721 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
722 | |
723 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
724 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
725 | |
726 | |
727 def test_anonymize_series(self): | |
728 # Upload 4 images from the same series | |
729 for i in range(4): | |
730 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
731 | |
732 origSeries = DoGet(_REMOTE, '/series')[0] | |
733 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
734 '{}', | |
735 'application/json')['ID'] | |
736 | |
737 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
738 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
739 self.assertEqual(4, len(instances)) | |
740 for i in instances: | |
741 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
742 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
743 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
744 | |
745 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
746 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
747 | |
748 | |
749 def test_anonymize_study(self): | |
750 # Upload 4 images from the 2 series of the same study | |
751 for i in range(4): | |
752 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
753 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
754 | |
755 origStudy = DoGet(_REMOTE, '/studies')[0] | |
756 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
757 '{"Replace":{"PatientName":"Jodogne"}}', | |
758 'application/json')['ID'] | |
759 | |
760 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
761 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
762 self.assertEqual(2, len(series)) | |
763 for s in series: | |
764 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
765 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
766 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
767 | |
768 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
769 for i in instances: | |
770 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
771 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
772 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
773 | |
774 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
775 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
11 | 776 |
777 | |
778 | |
779 def test_storescu(self): | |
780 # Check emptiness | |
781 e = DoGet(_REMOTE, '/exports') | |
782 self.assertEqual(0, len(e['Exports'])) | |
783 self.assertEqual(0, e['Last']) | |
784 self.assertTrue(e['Done']) | |
785 e = DoGet(_REMOTE, '/exports?last') | |
786 self.assertEqual(0, len(e['Exports'])) | |
787 self.assertEqual(0, e['Last']) | |
788 self.assertTrue(e['Done']) | |
789 | |
790 # Add 1 instance | |
791 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
792 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
793 | |
794 # Export the instance | |
795 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
796 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
797 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
798 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
799 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
800 | |
801 e = DoGet(_REMOTE, '/exports') | |
802 self.assertEqual(1, len(e['Exports'])) | |
803 self.assertTrue(e['Done']) | |
804 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
805 e = DoGet(_REMOTE, '/exports?limit=1') | |
806 self.assertEqual(1, len(e['Exports'])) | |
807 self.assertTrue(e['Done']) | |
808 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
809 e = DoGet(_REMOTE, '/exports?last') | |
810 self.assertEqual(1, len(e['Exports'])) | |
811 self.assertTrue(e['Done']) | |
812 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
813 seqInstance = e['Last'] | |
814 | |
815 # Export the series | |
816 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
817 | |
818 e = DoGet(_REMOTE, '/exports') | |
819 self.assertEqual(2, len(e['Exports'])) | |
820 self.assertTrue(e['Done']) | |
821 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
822 seqSeries = e['Last'] | |
823 self.assertNotEqual(seqInstance, seqSeries) | |
824 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
825 self.assertEqual(1, len(e['Exports'])) | |
826 self.assertFalse(e['Done']) | |
827 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
828 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
829 self.assertEqual(1, len(e['Exports'])) | |
830 self.assertTrue(e['Done']) | |
831 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
832 e = DoGet(_REMOTE, '/exports?last') | |
833 self.assertEqual(1, len(e['Exports'])) | |
834 self.assertTrue(e['Done']) | |
835 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
836 | |
837 # Export the study | |
838 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
839 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
840 | |
841 # Export the patient | |
842 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
843 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
844 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
845 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
846 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
847 | |
848 e = DoGet(_REMOTE, '/exports') | |
849 self.assertEqual(4, len(e['Exports'])) | |
850 self.assertTrue(e['Done']) | |
851 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
852 seqPatient = e['Last'] | |
853 self.assertNotEqual(seqInstance, seqSeries) | |
854 self.assertNotEqual(seqSeries, seqStudy) | |
855 self.assertNotEqual(seqStudy, seqPatient) | |
856 self.assertTrue(seqInstance < seqSeries) | |
857 self.assertTrue(seqSeries < seqStudy) | |
858 self.assertTrue(seqStudy < seqPatient) | |
859 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
860 self.assertEqual(1, len(e['Exports'])) | |
861 self.assertFalse(e['Done']) | |
862 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
863 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
864 self.assertEqual(1, len(e['Exports'])) | |
865 self.assertFalse(e['Done']) | |
866 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
867 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
868 self.assertEqual(1, len(e['Exports'])) | |
869 self.assertFalse(e['Done']) | |
870 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
871 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
872 self.assertEqual(1, len(e['Exports'])) | |
873 self.assertTrue(e['Done']) | |
874 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
875 e = DoGet(_REMOTE, '/exports?last') | |
876 self.assertEqual(1, len(e['Exports'])) | |
877 self.assertTrue(e['Done']) | |
878 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
879 | |
880 | |
881 # Check the content of the logged information | |
882 e = DoGet(_REMOTE, '/exports')['Exports'] | |
883 | |
884 if 'PatientID' in e[0]: | |
885 # Since Orthanc 0.8.6 | |
886 patient = 'PatientID' | |
887 study = 'StudyInstanceUID' | |
888 series = 'SeriesInstanceUID' | |
889 instance = 'SOPInstanceUID' | |
890 else: | |
891 # Up to Orthanc 0.8.5 | |
892 patient = 'PatientId' | |
893 study = 'StudyInstanceUid' | |
894 series = 'SeriesInstanceUid' | |
895 instance = 'SopInstanceUid' | |
896 | |
897 for k in range(4): | |
898 self.assertTrue('Date' in e[k]) | |
899 self.assertTrue('Seq' in e[k]) | |
900 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
901 | |
902 self.assertEqual(10, len(e[0])) | |
903 self.assertEqual('Instance', e[0]['ResourceType']) | |
904 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
905 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
906 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
907 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
908 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
909 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
910 | |
911 self.assertEqual(9, len(e[1])) | |
912 self.assertEqual('Series', e[1]['ResourceType']) | |
913 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
914 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
915 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
916 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
917 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
918 | |
919 self.assertEqual(8, len(e[2])) | |
920 self.assertEqual('Study', e[2]['ResourceType']) | |
921 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
922 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
923 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
924 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
925 | |
926 self.assertEqual(7, len(e[3])) | |
927 self.assertEqual('Patient', e[3]['ResourceType']) | |
928 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
929 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
930 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
931 | |
932 DropOrthanc(_REMOTE) | |
933 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
934 | |
935 | |
936 def test_store_peer(self): | |
937 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
938 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
939 | |
940 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
941 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
942 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
943 | |
944 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
945 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
946 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
947 | |
948 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
949 | |
950 DropOrthanc(_REMOTE) | |
951 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
952 | |
953 | |
954 def test_bulk_storescu(self): | |
955 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
956 | |
957 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
958 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
959 | |
960 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
961 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
962 | |
963 DropOrthanc(_LOCAL) | |
964 | |
965 # Send using patient's UUID | |
966 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
967 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
968 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
969 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
970 | |
971 | |
972 def test_color(self): | |
973 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
974 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
975 self.assertEqual("RGB", im.mode) | |
976 self.assertEqual(41, im.size[0]) | |
977 self.assertEqual(41, im.size[1]) | |
978 | |
979 # http://effbot.org/zone/pil-comparing-images.htm | |
13 | 980 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
11 | 981 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
982 | |
983 | |
12 | 984 def test_faking_ruby_put(self): |
985 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
986 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
987 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
988 a = DoGet(_REMOTE, '/patients')[0] | |
989 b = DoGet(_REMOTE, '/patients')[1] | |
990 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
991 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
992 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
993 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
994 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
995 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
996 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
997 | |
998 | |
999 def test_faking_ruby_delete(self): | |
1000 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1001 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1002 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1003 a = DoGet(_REMOTE, '/patients')[0] | |
1004 b = DoGet(_REMOTE, '/patients')[1] | |
1005 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
1006 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1007 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
1008 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1009 | |
1010 | |
1011 def test_faking_google_put(self): | |
1012 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1013 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1014 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1015 a = DoGet(_REMOTE, '/patients')[0] | |
1016 b = DoGet(_REMOTE, '/patients')[1] | |
1017 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1018 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
1019 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1020 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
1021 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1022 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
1023 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
1024 | |
1025 | |
1026 def test_faking_google_delete(self): | |
1027 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1028 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1029 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1030 a = DoGet(_REMOTE, '/patients')[0] | |
1031 b = DoGet(_REMOTE, '/patients')[1] | |
1032 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
1033 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1034 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
1035 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1036 | |
1037 | |
1038 def test_lua(self): | |
1039 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
1040 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
1041 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
1042 | |
1043 | |
1044 def test_metadata(self): | |
1045 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
1046 p = DoGet(_REMOTE, '/patients')[0] | |
1047 i = DoGet(_REMOTE, '/instances')[0] | |
369
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1048 series = DoGet(_REMOTE, '/series')[0] |
12 | 1049 |
1050 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
1051 self.assertEqual(1, len(m)) | |
1052 self.assertEqual('LastUpdate', m[0]) | |
1053 | |
369
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1054 # The lines below failed on Orthanc <= 1.8.2 |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1055 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1056 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1057 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1058 |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1059 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1060 self.assertEqual(1, len(m)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1061 self.assertEqual('LastUpdate', m[0]) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1062 |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1063 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1064 self.assertEqual(2, len(m)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1065 self.assertTrue('LastUpdate' in m) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1066 |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1067 # New in Orthanc 1.9.0 |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1068 self.assertTrue('RemoteAET' in m) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1069 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1070 |
12 | 1071 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1072 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1073 self.assertEqual(9, len(m)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1074 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1075 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1076 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1077 self.assertEqual(8, len(m)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1078 |
12 | 1079 self.assertTrue('IndexInSeries' in m) |
1080 self.assertTrue('ReceptionDate' in m) | |
1081 self.assertTrue('RemoteAET' in m) | |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1082 self.assertTrue('Origin' in m) |
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
1083 self.assertTrue('TransferSyntax' in m) |
95
a807a4699eb4
testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
92
diff
changeset
|
1084 self.assertTrue('SopClassUid' in m) |
145 | 1085 self.assertTrue('RemoteIP' in m) |
1086 self.assertTrue('HttpUsername' in m) | |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1087 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1088 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1089 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
1090 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
95
a807a4699eb4
testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
92
diff
changeset
|
1091 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
12 | 1092 |
1093 # Play with custom metadata | |
1094 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') | |
1095 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
1096 self.assertEqual(2, len(m)) | |
1097 self.assertTrue('LastUpdate' in m) | |
1098 self.assertTrue('5555' in m) | |
1099 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
1100 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') | |
1101 self.assertEqual('hello', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
1102 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) | |
1103 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
1104 self.assertEqual(1, len(m)) | |
1105 self.assertTrue('LastUpdate' in m) | |
13 | 1106 |
1107 | |
1108 def test_statistics(self): | |
1109 # Upload 16 instances | |
1110 for i in range(4): | |
1111 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
1112 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
1113 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
1114 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
1115 | |
1116 s = DoGet(_REMOTE, '/statistics') | |
1117 self.assertEqual(16, s['CountInstances']) | |
1118 self.assertEqual(2, s['CountPatients']) | |
1119 self.assertEqual(2, s['CountStudies']) | |
1120 self.assertEqual(4, s['CountSeries']) | |
1121 d = int(s['TotalUncompressedSize']) | |
1122 | |
1123 e = 0 | |
1124 for patient in DoGet(_REMOTE, '/patients'): | |
1125 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
1126 self.assertEqual(8, s['CountInstances']) | |
1127 self.assertEqual(1, s['CountStudies']) | |
1128 self.assertEqual(2, s['CountSeries']) | |
1129 e += int(s['UncompressedSize']) | |
1130 | |
1131 for study in DoGet(_REMOTE, '/studies'): | |
1132 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
1133 self.assertEqual(8, s['CountInstances']) | |
1134 self.assertEqual(2, s['CountSeries']) | |
1135 e += int(s['UncompressedSize']) | |
1136 | |
1137 for series in DoGet(_REMOTE, '/series'): | |
1138 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
1139 self.assertEqual(4, s['CountInstances']) | |
1140 e += int(s['UncompressedSize']) | |
1141 | |
1142 self.assertEqual(3 * d, e) | |
1143 | |
1144 | |
1145 def test_custom_attachment(self): | |
1146 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
1147 patient = DoGet(_REMOTE, '/patients')[0] | |
1148 instance = DoGet(_REMOTE, '/instances')[0] | |
1149 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
1150 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1151 | |
1152 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1153 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) | |
1154 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
1155 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
1156 | |
1157 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) | |
1158 hello = 'hellohellohellohellohellohellohellohellohello' | |
1159 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
1160 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1161 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1162 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1163 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
1164 | |
1165 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
1166 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1167 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1168 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1169 size + | |
1170 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
1171 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
1172 | |
1173 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1174 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
1175 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
1176 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
1177 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
1178 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2') | |
1179 self.assertEqual('world2', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
1180 | |
1181 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
1182 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient) | |
1183 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1184 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1185 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
1186 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
1187 | |
1188 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1189 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) | |
1190 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
1191 | |
1192 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
1193 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
1194 | |
1195 | |
1196 def test_incoming_storescu(self): | |
1197 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
45 | 1198 subprocess.check_call([ FindExecutable('storescu'), |
44
ffa542cce638
Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
43
diff
changeset
|
1199 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
13 | 1200 GetDatabasePath('ColorTestImageJ.dcm') ]) |
1201 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1202 | |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1203 i = DoGet(_REMOTE, '/instances') |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1204 self.assertEqual(1, len(i)) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1205 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1206 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1207 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1208 self.assertEqual(9, len(m)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1209 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1210 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1211 self.assertEqual(8, len(m)) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
1212 |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1213 self.assertTrue('IndexInSeries' in m) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1214 self.assertTrue('ReceptionDate' in m) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1215 self.assertTrue('RemoteAET' in m) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1216 self.assertTrue('Origin' in m) |
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
1217 self.assertTrue('TransferSyntax' in m) |
95
a807a4699eb4
testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
92
diff
changeset
|
1218 self.assertTrue('SopClassUid' in m) |
145 | 1219 self.assertTrue('RemoteIP' in m) |
1220 self.assertTrue('CalledAET' in m) | |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1221 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1222 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1223 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
1224 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
95
a807a4699eb4
testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
92
diff
changeset
|
1225 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
63
2652d562267a
test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
62
diff
changeset
|
1226 |
369
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1227 series = DoGet(_REMOTE, '/series')[0] |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1228 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1229 self.assertEqual(2, len(m)) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1230 self.assertTrue('LastUpdate' in m) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1231 self.assertTrue('RemoteAET' in m) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1232 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1233 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1234 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
24d93b42873a
test "RemoteAET" metadata at series level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
368
diff
changeset
|
1235 |
13 | 1236 |
1237 def test_incoming_findscu(self): | |
1238 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
1239 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
1240 | |
1241 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
1242 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
1243 self.assertEqual(2, len(patientNames)) | |
1244 self.assertTrue('Test Patient BG ' in patientNames) | |
1245 self.assertTrue('Anonymized' in patientNames) | |
1246 | |
1247 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) | |
1248 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
1249 self.assertEqual(2, len(series)) | |
1250 self.assertTrue('20070208' in series) | |
1251 self.assertTrue('19980312' in series) | |
1252 | |
335
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
1253 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
56
1059b8de42de
ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
55
diff
changeset
|
1254 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
1059b8de42de
ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
55
diff
changeset
|
1255 self.assertEqual(1, len(series)) |
1059b8de42de
ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
55
diff
changeset
|
1256 self.assertTrue('19980312' in series) |
1059b8de42de
ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
55
diff
changeset
|
1257 |
13 | 1258 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
1259 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
1260 self.assertEqual(1, len(series)) | |
1261 | |
1262 # Test the "CaseSentitivePN" flag (false by default) | |
1263 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
1264 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
1265 self.assertEqual(1, len(series)) | |
66
821d9eb73c45
Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
1266 |
70 | 1267 # Test range search (buggy if Orthanc <= 0.9.6) |
1268 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
1269 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1270 self.assertEqual(2, len(studies)) | |
1271 self.assertTrue('20070208' in studies) | |
1272 self.assertTrue('19980312' in studies) | |
1273 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
1274 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1275 self.assertEqual(1, len(studies)) | |
1276 self.assertTrue('19980312' in studies) | |
1277 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
1278 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
1279 self.assertEqual(1, len(studies)) | |
1280 self.assertTrue('19980312' in studies) | |
326
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1281 |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1282 # Test that "Retrieve AE Title (0008,0054)" is present, which |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1283 # was *not* the case in Orthanc <= 1.7.2 |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1284 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1285 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1286 self.assertEqual(2, len(instances)) |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1287 self.assertEqual('ORTHANC', instances[0].strip()) |
05f48c19c60d
Test "Retrieve AE Title" is returned by C-FIND SCP
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
324
diff
changeset
|
1288 self.assertEqual('ORTHANC', instances[1].strip()) |
13 | 1289 |
1290 | |
191
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1291 def test_incoming_findscu_2(self): |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1292 # This test fails if "LookupMode_DatabaseOnly" is used |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1293 # (sequences are not available in this mode, and only main |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1294 # DICOM tags are returned) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1295 UploadInstance(_REMOTE, 'Multiframe.dcm') |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1296 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1297 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1298 # Test returning sequence values (only since Orthanc 0.9.5) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1299 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1300 sequences = re.findall('\(0008,2112\)', i) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1301 self.assertEqual(1, len(sequences)) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1302 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1303 # Test returning a non-main DICOM tag, |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1304 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1305 # "MEDPC" in "ColorTestImageJ.dcm" |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1306 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1307 tags = re.findall('\(0018,1010\).*MEDPC', i) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1308 self.assertEqual(1, len(tags)) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1309 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1310 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1311 def test_incoming_findscu_3(self): |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1312 # This test fails if "LookupMode_DatabaseOnly" or |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1313 # "LookupMode_DiskOnAnswer" is used, as |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1314 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1315 # tag, as thus a constraint cannot be applied to it |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1316 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1317 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1318 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1319 sequences = re.findall('\(0018,1010\)', i) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1320 self.assertEqual(1, len(sequences)) |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1321 |
bc8bc83465dc
testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
189
diff
changeset
|
1322 |
13 | 1323 def test_incoming_movescu(self): |
1324 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1325 |
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1326 # No matching patient, so no job is created |
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1327 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1328 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
13 | 1329 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1330 |
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
1331 # 1 Matching patient, track the job |
138 | 1332 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
1333 '--patient', | |
1334 '-k', '0008,0052=PATIENT', | |
1335 '-k', 'PatientID=12345678' | |
1336 ]))) | |
13 | 1337 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
1338 | |
1339 | |
1340 def test_findscu(self): | |
1341 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
1342 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
1343 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
1344 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
1345 | |
1346 # Test the "find-patient" level | |
1347 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
1348 self.assertEqual(1, len(p)) | |
1349 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
1350 | |
1351 # Test wildcards constraints. The "LO" value representation | |
1352 # for PatientID is always case-sensitive, but the "PN" for | |
1353 # PatientName might depend on the implementation: | |
1354 # "GenerateConfigurationForTests.py" will force it to be case | |
1355 # insensitive (which was the default until Orthanc 0.8.6). | |
1356 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
1357 self.assertEqual(1, len(p)) | |
1358 | |
1359 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
1360 self.assertEqual(1, len(p)) | |
1361 | |
1362 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
1363 self.assertEqual(1, len(p)) | |
1364 | |
1365 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
1366 self.assertEqual(1, len(p)) | |
1367 | |
1368 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
1369 self.assertEqual(0, len(p)) | |
1370 | |
1371 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
1372 self.assertEqual(0, len(p)) | |
1373 | |
1374 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
1375 self.assertEqual(0, len(p)) | |
1376 | |
1377 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
1378 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
1379 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
1380 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
1381 | |
1382 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
1383 self.assertEqual(2, len(p)) | |
1384 | |
1385 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
1386 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
1387 self.assertEqual(1, len(s)) | |
1388 self.assertEqual('20070208', s[0]['StudyDate']) | |
1389 | |
1390 # Test range searches | |
1391 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1392 'StudyDate' : '-20070101' }) | |
1393 self.assertEqual(0, len(t)) | |
1394 | |
1395 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1396 'StudyDate' : '20090101-' }) | |
1397 self.assertEqual(0, len(t)) | |
1398 | |
1399 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1400 'StudyDate' : '20070101-' }) | |
1401 self.assertEqual(1, len(t)) | |
1402 | |
1403 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1404 'StudyDate' : '-20090101' }) | |
1405 self.assertEqual(1, len(t)) | |
1406 | |
1407 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1408 'StudyDate' : '20070207-20070207' }) | |
1409 self.assertEqual(0, len(t)) | |
1410 | |
1411 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1412 'StudyDate' : '20070208-20070208' }) | |
1413 self.assertEqual(1, len(t)) | |
1414 | |
1415 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
1416 'StudyDate' : '20070209-20070209' }) | |
1417 self.assertEqual(0, len(t)) | |
1418 | |
1419 # Test the ModalitiesInStudy tag | |
1420 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1421 'PatientID' : 'B9uTHKOZ', | |
1422 'ModalitiesInStudy' : 'US' }) | |
1423 self.assertEqual(0, len(t)) | |
1424 | |
1425 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1426 'PatientID' : 'B9uTHKOZ', | |
1427 'ModalitiesInStudy' : 'CT' }) | |
1428 self.assertEqual(1, len(t)) | |
1429 | |
1430 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
1431 'PatientID' : 'B9uTHKOZ', | |
1432 'ModalitiesInStudy' : 'US\\CT' }) | |
1433 self.assertEqual(1, len(t)) | |
1434 | |
1435 # Test the "find-series" level | |
1436 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1437 'PatientID' : 'B9uTHKOZ', | |
1438 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
1439 self.assertEqual(1, len(t)) | |
1440 | |
1441 # Test "\" separator | |
1442 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1443 'PatientID' : 'B9uTHKOZ', | |
1444 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
1445 'Modality' : 'MR\\CT\\US' }) | |
1446 self.assertEqual(1, len(t)) | |
1447 | |
1448 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
1449 'PatientID' : 'B9uTHKOZ', | |
1450 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
1451 'Modality' : 'MR\\US' }) | |
1452 self.assertEqual(0, len(t)) | |
1453 | |
1454 | |
1455 def test_update_modalities(self): | |
1456 try: | |
1457 DoDelete(_REMOTE, '/modalities/toto') | |
1458 except: | |
1459 pass | |
1460 try: | |
1461 DoDelete(_REMOTE, '/modalities/tata') | |
1462 except: | |
1463 pass | |
1464 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
348
bed0ab3a1391
test deleting inexistent modality/peer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
342
diff
changeset
|
1465 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
13 | 1466 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
116 | 1467 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
1468 DoDelete(_REMOTE, '/modalities/tata') | |
124 | 1469 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
121
1a19f953f53c
also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
120
diff
changeset
|
1470 DoDelete(_REMOTE, '/modalities/tata') |
1a19f953f53c
also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
120
diff
changeset
|
1471 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
128 | 1472 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
182
7a6b532853ab
modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
181
diff
changeset
|
1473 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
7a6b532853ab
modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
181
diff
changeset
|
1474 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
7a6b532853ab
modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
181
diff
changeset
|
1475 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
7a6b532853ab
modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
181
diff
changeset
|
1476 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
116 | 1477 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
13 | 1478 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
1479 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
351
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1480 |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1481 # New in Orthanc 1.8.1 |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1482 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1483 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1484 |
13 | 1485 DoDelete(_REMOTE, '/modalities/toto') |
1486 DoDelete(_REMOTE, '/modalities/tata') | |
1487 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
1488 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
1489 | |
1490 | |
1491 def test_update_peers(self): | |
1492 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
1493 try: | |
1494 DoDelete(_REMOTE, '/peers/toto') | |
1495 except: | |
1496 pass | |
1497 try: | |
1498 DoDelete(_REMOTE, '/peers/tata') | |
1499 except: | |
1500 pass | |
1501 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
348
bed0ab3a1391
test deleting inexistent modality/peer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
342
diff
changeset
|
1502 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
13 | 1503 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
214 | 1504 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
1505 'Username': 'user', | |
1506 'Password' : 'pass', | |
1507 'RemoteSelf' : 'self' }) | |
128 | 1508 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
1509 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
1510 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
1511 self.assertEqual('user', peersReadback['tata']['Username']) | |
214 | 1512 |
1513 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
1514 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
1515 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
1516 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
1517 else: | |
1518 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
1519 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
1520 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
1521 | |
128 | 1522 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
1523 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
1524 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
214 | 1525 |
13 | 1526 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
1527 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
1528 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
1529 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
351
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1530 |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1531 # New in Orthanc 1.8.1 |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1532 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1533 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
429cc9d03610
test access to the configuration of one single peer or modality
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
350
diff
changeset
|
1534 |
13 | 1535 DoDelete(_REMOTE, '/peers/toto') |
1536 DoDelete(_REMOTE, '/peers/tata') | |
1537 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
1538 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
1539 | |
1540 | |
1541 def test_mesterhazy_modification(self): | |
1542 # When I modify a series ( eg. curl | |
1543 # http://localhost:8042/series/uidhere/modify -X POST -d | |
1544 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
1545 # series is added to a new Study, instead of the existing | |
1546 # Study. Fixed in Orthanc 0.7.5 | |
1547 | |
1548 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
1549 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
1550 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
1551 | |
1552 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
1553 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
1554 | |
1555 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
1556 | |
1557 | |
1558 def test_create(self): | |
1559 i = DoPost(_REMOTE, '/tools/create-dicom', | |
1560 json.dumps({ | |
1561 'PatientName' : 'Jodogne', | |
1562 'Modality' : 'CT', | |
58 | 1563 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
13 | 1564 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA |
1565 })) | |
1566 | |
1567 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
1568 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
1569 | |
1570 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
1571 self.assertEqual((5, 5), png.size) | |
1572 | |
38 | 1573 j = DoGet(_REMOTE, i['Path']) |
1574 self.assertEqual('Instance', j['Type']) | |
1575 self.assertEqual(j['ID'], i['ID']) | |
1576 | |
13 | 1577 |
1578 def test_pilates(self): | |
1579 # "SCU failed error when accessing orthanc with osirix" by | |
1580 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
1581 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
1582 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
1583 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
1584 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
1585 | |
1586 | |
1587 def test_shared_tags(self): | |
1588 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1589 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
1590 p = DoGet(_REMOTE, '/patients')[0] | |
1591 | |
1592 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1593 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1594 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1595 |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1596 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1597 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1598 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
1599 |
13 | 1600 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
1601 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1602 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1603 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1604 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
1605 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
1606 | |
1607 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
1608 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
1609 | |
1610 | |
1611 def test_modules(self): | |
1612 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1613 p = DoGet(_REMOTE, '/patients')[0] | |
1614 s = DoGet(_REMOTE, '/studies')[0] | |
1615 t = DoGet(_REMOTE, '/series')[0] | |
1616 | |
1617 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
1618 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
1619 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
1620 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
1621 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
1622 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
1623 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
1624 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
1625 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
1626 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
1627 | |
1628 | |
1629 def test_auto_directory(self): | |
1630 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
1631 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
1632 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
1633 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
13 | 1634 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
1635 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
1636 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1637 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1638 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1639 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1640 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1641 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1642 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
1643 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
1644 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
79 | 1645 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
13 | 1646 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
28 | 1647 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
1648 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
1649 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
1650 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
13 | 1651 |
1652 | |
1653 def test_echo(self): | |
1654 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
359
8b476a383999
test empty body in /modalities/.../echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
357
diff
changeset
|
1655 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
8b476a383999
test empty body in /modalities/.../echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
357
diff
changeset
|
1656 |
8b476a383999
test empty body in /modalities/.../echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
357
diff
changeset
|
1657 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
8b476a383999
test empty body in /modalities/.../echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
357
diff
changeset
|
1658 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
352
3d406c0261fc
test /tools/dicom-echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
351
diff
changeset
|
1659 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
3d406c0261fc
test /tools/dicom-echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
351
diff
changeset
|
1660 |
3d406c0261fc
test /tools/dicom-echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
351
diff
changeset
|
1661 # New in Orthanc 1.8.1 |
3d406c0261fc
test /tools/dicom-echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
351
diff
changeset
|
1662 DoPost(_REMOTE, '/tools/dicom-echo', [ |
355 | 1663 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
352
3d406c0261fc
test /tools/dicom-echo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
351
diff
changeset
|
1664 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
13 | 1665 |
353 | 1666 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
1667 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
1668 DoPost(_REMOTE, '/tools/dicom-echo', { | |
1669 'AET' : _REMOTE['DicomAet'], | |
1670 'Host' : _REMOTE['Server'], | |
1671 'Port' : _REMOTE['DicomPort'], | |
1672 'CheckFind' : True | |
1673 }) | |
1674 | |
13 | 1675 |
1676 def test_xml(self): | |
1677 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
1678 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
1679 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
1680 self.assertEqual(len(items), len(json)) | |
1681 | |
1682 self.assertTrue('dicom-conformance' in json) | |
1683 | |
1684 ok = False | |
1685 for i in items: | |
1686 if i.childNodes[0].data == 'dicom-conformance': | |
1687 ok = True | |
1688 self.assertTrue(ok) | |
1689 | |
1690 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
1691 def test_googlecode_issue_16(self): |
13 | 1692 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
1693 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
1694 self.assertEqual('0018,1063', t) | |
1695 | |
1696 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
1697 def test_googlecode_issue_22(self): |
13 | 1698 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
1699 a = [ | |
1700 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
1701 "c69eee9a51eea3e8611e82e578897254", | |
1702 "315666be83e2d0111c77bc0996d84901", | |
1703 "3e27aa959d911172c48a1436443c72b1", | |
1704 "958642c9e7e9d232d3869faff546058c", | |
1705 "5e7ea8e3e4230cae707d143481355c59", | |
1706 "eda37f83558d858a596175aed8b2ad47", | |
1707 "486713bd2895c4ecbe0e97715ac7f80a", | |
1708 "091ef729eb169e67da8a0faa9631f9a8", | |
1709 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
1710 "e2f39e85896fe58876654b94cd0b5013", | |
1711 "6fd2129e4950abbe1be053bc814d5da8", | |
1712 "c3331a8ba7a757f3d423735ab7fa81f9", | |
1713 "746f808582156734dd6b6fdfd3a0b72c", | |
1714 "8075ea2b227a70c60ea6b7b75a6bb190", | |
1715 "806b8b3e300c615099c11a5ec23465aa", | |
1716 "7c836aa298ba6eef96434579af631a11", | |
1717 "a0357dc9f4f72d73a885c33d7c287446", | |
1718 "f25ba3be1cc7d7fad95706adc199ea7d", | |
1719 "8b114c526b8cbed6cad8a3248b7b480c", | |
1720 "44e6670f127e612a2b4aa60a0d207698", | |
1721 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
1722 "95c796c2fa8f59018b15cf2987b1f79b", | |
1723 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
1724 ] | |
1725 | |
1726 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
1727 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
1728 | |
1729 for i in range(len(a)): | |
1730 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
1731 | |
1732 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
1733 def test_googlecode_issue_19(self): |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
1734 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
13 | 1735 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
1736 | |
1737 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
304 | 1738 if not HasGdcmPlugin(_REMOTE): |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
1739 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
13 | 1740 |
1741 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
1742 def test_googlecode_issue_37(self): |
13 | 1743 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
1744 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
1745 | |
1746 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
1747 'CaseSensitive' : True, | |
1748 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
1749 self.assertEqual(1, len(a)) | |
14 | 1750 |
1751 | |
1752 def test_rest_find(self): | |
1753 # Upload 8 instances | |
1754 for i in range(2): | |
1755 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
1756 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
1757 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
1758 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
1759 | |
1760 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1761 'CaseSensitive' : False, | |
194
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1762 'Query' : { 'PatientName' : 'BRAINIX' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1763 self.assertEqual(1, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1764 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1765 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1766 'CaseSensitive' : False, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1767 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1768 self.assertEqual(2, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1769 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1770 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1771 'CaseSensitive' : False, |
14 | 1772 'Query' : { 'PatientName' : '*n*' }}) |
1773 self.assertEqual(2, len(a)) | |
1774 | |
1775 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1776 'CaseSensitive' : True, | |
1777 'Query' : { 'PatientName' : '*n*' }}) | |
1778 self.assertEqual(0, len(a)) | |
1779 | |
1780 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
1781 'Level' : 'Patient', | |
1782 'CaseSensitive' : False, | |
1783 'Query' : { 'PatientName' : '*ne*' }}) | |
1784 self.assertEqual(1, len(a)) | |
1785 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
1786 | |
1787 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
1788 'CaseSensitive' : True, | |
1789 'Query' : { 'PatientName' : '*ne*' }}) | |
1790 self.assertEqual(0, len(a)) | |
1791 | |
1792 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
1793 'CaseSensitive' : True, | |
1794 'Query' : { 'PatientName' : '*NE*' }}) | |
1795 self.assertEqual(1, len(a)) | |
1796 | |
1797 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
1798 'CaseSensitive' : True, | |
1799 'Query' : { 'PatientName' : '*NE*' }}) | |
1800 self.assertEqual(2, len(a)) | |
1801 | |
1802 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
1803 'CaseSensitive' : True, | |
1804 'Query' : { 'PatientName' : '*NE*' }}) | |
1805 self.assertEqual(4, len(a)) | |
1806 | |
1807 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
1808 self.assertEqual(2, len(a)) | |
1809 | |
1810 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
1811 self.assertEqual(2, len(a)) | |
1812 | |
1813 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
1814 self.assertEqual(4, len(a)) | |
1815 | |
1816 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
1817 self.assertEqual(8, len(a)) | |
1818 | |
194
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1819 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1820 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1821 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1822 self.assertEqual(1, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1823 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1824 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1825 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1826 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1827 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1828 self.assertEqual(2, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1829 for i in range(2): |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1830 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1831 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1832 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1833 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1834 self.assertEqual(0, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1835 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1836 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1837 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1838 'Query' : { 'StudyDate' : '-20061201' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1839 self.assertEqual(1, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1840 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1841 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1842 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1843 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1844 'Query' : { 'StudyDate' : '-20051201' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1845 self.assertEqual(0, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1846 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1847 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1848 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1849 'Query' : { 'StudyDate' : '20061201-' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1850 self.assertEqual(2, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1851 for i in range(2): |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1852 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1853 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1854 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1855 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1856 'Query' : { 'StudyDate' : '20061202-' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1857 self.assertEqual(1, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1858 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1859 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1860 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1861 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1862 'Query' : { 'StudyDate' : '20080819-' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1863 self.assertEqual(1, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1864 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1865 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1866 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1867 'Expand' : True, |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1868 'Query' : { 'StudyDate' : '20080820-' }}) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1869 self.assertEqual(0, len(a)) |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1870 |
9f7ae64c0fda
more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
1871 |
14 | 1872 |
1873 def test_rest_query_retrieve(self): | |
1874 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1875 | |
1876 # Upload 8 instances | |
1877 for i in range(2): | |
1878 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
1879 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
1880 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
1881 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
1882 | |
1883 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
1884 for p in DoGet(_REMOTE, '/patients'): | |
1885 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
1886 DoDelete(_REMOTE, '/patients/%s' % p) | |
1887 | |
1888 for q in DoGet(_REMOTE, '/queries'): | |
1889 DoDelete(_REMOTE, '/queries/%s' % q) | |
1890 | |
1891 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1892 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
1893 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', | |
27 | 1894 'Query' : { |
1895 'PatientName' : '*NE*', | |
1896 'StudyDate' : '*', | |
1897 }})['ID'] | |
14 | 1898 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
1899 | |
1900 b = DoGet(_REMOTE, '/queries/%s' % a) | |
1901 self.assertTrue('answers' in b) | |
1902 self.assertTrue('level' in b) | |
1903 self.assertTrue('modality' in b) | |
1904 self.assertTrue('query' in b) | |
1905 self.assertTrue('retrieve' in b) | |
1906 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) | |
1907 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) | |
1908 | |
1909 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) | |
27 | 1910 self.assertEqual(2, len(q)) |
14 | 1911 self.assertTrue('PatientName' in q) |
27 | 1912 self.assertTrue('StudyDate' in q) |
14 | 1913 self.assertEqual('*NE*', q['PatientName']) |
27 | 1914 self.assertEqual('*', q['StudyDate']) |
14 | 1915 |
1916 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
1917 | |
1918 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) | |
1919 self.assertTrue('content' in s) | |
1920 self.assertTrue('retrieve' in s) | |
1921 | |
1922 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) | |
1923 self.assertEqual('887', s['PatientID']) | |
1924 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) | |
1925 | |
1926 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
1927 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') | |
1928 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
1929 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
1930 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
1931 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
1932 | |
112 | 1933 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
14 | 1934 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
1935 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
1936 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
1937 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
1938 | |
186
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1939 # New in Orthanc 1.4.3 |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1940 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1941 self.assertEqual(2, len(s)) |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1942 for i in range(2): |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1943 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1944 self.assertEqual('887', s[i]['PatientID']) |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1945 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
8feebc2bf9fc
test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
1946 |
14 | 1947 DoDelete(_REMOTE, '/queries/%s' % a) |
1948 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
1949 | |
1950 | |
1951 def test_parent(self): | |
1952 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
1953 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
1954 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
1955 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
1956 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
1957 self.assertEqual(instance, u) |
14 | 1958 |
1959 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
1960 self.assertEqual('Patient', a['Type']) | |
1961 self.assertEqual(patient, a['ID']) | |
1962 | |
1963 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
1964 self.assertEqual('Patient', a['Type']) | |
1965 self.assertEqual(patient, a['ID']) | |
1966 | |
1967 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
1968 self.assertEqual('Study', a['Type']) | |
1969 self.assertEqual(study, a['ID']) | |
1970 | |
1971 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
1972 self.assertEqual('Patient', a['Type']) | |
1973 self.assertEqual(patient, a['ID']) | |
1974 | |
1975 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
1976 self.assertEqual('Study', a['Type']) | |
1977 self.assertEqual(study, a['ID']) | |
1978 | |
1979 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
1980 self.assertEqual('Series', a['Type']) | |
1981 self.assertEqual(series, a['ID']) | |
1982 | |
1983 | |
1984 def test_shanon(self): | |
1985 def Anonymize(instance, replacements = {}): | |
119 | 1986 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
1987 'Replace' : replacements, | |
1988 'Force' : True, | |
1989 }, 'application/json') | |
14 | 1990 |
1991 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
1992 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
1993 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
1994 | |
1995 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
1996 ids = [ 'ozp00SjY2xG', | |
1997 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
1998 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
1999 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
2000 | |
2001 a = ExtractDicomTags(Anonymize(u), tags) | |
2002 for i in range(4): | |
2003 self.assertNotEqual(ids[i], a[i]) | |
2004 self.assertTrue(a[4].startswith('Orthanc')) | |
2005 | |
2006 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
2007 for i in range(4): | |
2008 self.assertNotEqual(ids[i], a[i]) | |
2009 self.assertFalse(a[4].startswith('Orthanc')) | |
2010 | |
2011 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
2012 self.assertEqual('instance', a[3]) | |
2013 self.assertFalse(a[4].startswith('Orthanc')) | |
2014 | |
2015 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
2016 self.assertEqual('series', a[2]) | |
2017 self.assertFalse(a[4].startswith('Orthanc')) | |
2018 | |
2019 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
2020 self.assertEqual('study', a[1]) | |
2021 self.assertFalse(a[4].startswith('Orthanc')) | |
2022 | |
2023 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
2024 self.assertEqual('patient', a[0]) | |
2025 self.assertFalse(a[4].startswith('Orthanc')) | |
2026 | |
2027 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
2028 'StudyInstanceUID' : 'study', | |
2029 'SeriesInstanceUID' : 'series', | |
2030 'SOPInstanceUID' : 'instance' }), tags) | |
2031 self.assertEqual('patient', a[0]) | |
2032 self.assertFalse(a[4].startswith('Orthanc')) | |
2033 | |
2034 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2035 | |
2036 | |
2037 def test_shanon_2(self): | |
2038 def Modify(instance, replacements = {}): | |
119 | 2039 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
2040 'Replace' : replacements, | |
2041 'Force': True, | |
2042 }, 'application/json') | |
14 | 2043 |
2044 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
2045 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
2046 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2047 | |
2048 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
2049 ids = [ 'ozp00SjY2xG', | |
2050 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
2051 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
2052 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
2053 | |
2054 a = ExtractDicomTags(Modify(u), tags) | |
2055 self.assertEqual(ids[0], a[0]) | |
2056 self.assertEqual(ids[1], a[1]) | |
2057 self.assertEqual(ids[2], a[2]) | |
2058 self.assertNotEqual(ids[3], a[3]) | |
2059 self.assertEqual(0, len(a[4])) | |
2060 | |
2061 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
2062 self.assertEqual(ids[0], a[0]) | |
2063 self.assertEqual(ids[1], a[1]) | |
2064 self.assertEqual(ids[2], a[2]) | |
2065 self.assertEqual('instance', a[3]) | |
2066 | |
2067 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
2068 self.assertEqual(ids[0], a[0]) | |
2069 self.assertEqual(ids[1], a[1]) | |
2070 self.assertEqual('series', a[2]) | |
2071 self.assertNotEqual(ids[3], a[3]) | |
2072 | |
2073 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
2074 self.assertEqual(ids[0], a[0]) | |
2075 self.assertEqual('study', a[1]) | |
2076 self.assertNotEqual(ids[2], a[2]) | |
2077 self.assertNotEqual(ids[3], a[3]) | |
2078 | |
2079 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
2080 self.assertEqual('patient', a[0]) | |
2081 self.assertNotEqual(ids[1], a[1]) | |
2082 self.assertNotEqual(ids[2], a[2]) | |
2083 self.assertNotEqual(ids[3], a[3]) | |
2084 | |
2085 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
2086 'StudyInstanceUID' : 'study', | |
2087 'SeriesInstanceUID' : 'series', | |
2088 'SOPInstanceUID' : 'instance' }), tags) | |
2089 self.assertEqual('patient', a[0]) | |
2090 self.assertEqual('study', a[1]) | |
2091 self.assertEqual('series', a[2]) | |
2092 self.assertEqual('instance', a[3]) | |
2093 | |
2094 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
2095 | |
2096 | |
2097 def test_instances_tags(self): | |
2098 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
2099 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
2100 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
2101 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
2102 | |
2103 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
2104 self.assertEqual(2, len(i)) | |
2105 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2106 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
2107 | |
2108 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
2109 self.assertEqual(2, len(i)) | |
2110 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2111 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
2112 | |
2113 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
2114 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
2115 self.assertEqual(1, len(i)) | |
2116 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2117 | |
2118 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
2119 self.assertEqual(1, len(i)) | |
2120 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
2121 | |
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2122 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2123 self.assertEqual(1, len(i)) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2124 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2125 |
14 | 2126 |
2127 def test_lookup(self): | |
2128 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
2129 self.assertEqual(0, len(a)) | |
2130 | |
2131 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
2132 | |
2133 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
2134 self.assertEqual(1, len(a)) | |
2135 self.assertEqual('Patient', a[0]['Type']) | |
2136 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
2137 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
2138 | |
2139 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
2140 self.assertEqual(1, len(a)) | |
2141 self.assertEqual('Study', a[0]['Type']) | |
2142 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
2143 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
2144 | |
2145 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
2146 self.assertEqual(1, len(a)) | |
2147 self.assertEqual('Series', a[0]['Type']) | |
2148 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
2149 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
2150 | |
2151 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
2152 self.assertEqual(1, len(a)) | |
2153 self.assertEqual('Instance', a[0]['Type']) | |
2154 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
2155 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
2156 | |
2157 DropOrthanc(_REMOTE) | |
2158 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
2159 self.assertEqual(0, len(a)) | |
2160 | |
15 | 2161 |
2162 def test_autorouting(self): | |
2163 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
2164 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
2165 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
2166 | |
2167 # Check that this version is >= 0.8.0 | |
2168 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
2169 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
2170 | |
2171 UploadInstance(_REMOTE, knee1) | |
2172 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
2173 | |
2174 DropOrthanc(_REMOTE) | |
2175 DropOrthanc(_LOCAL) | |
174 | 2176 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
15 | 2177 UploadInstance(_REMOTE, knee1) |
2178 UploadInstance(_REMOTE, knee2) | |
2179 UploadInstance(_REMOTE, other) | |
2180 WaitEmpty(_REMOTE) | |
174 | 2181 UninstallLuaCallbacks(_REMOTE) |
15 | 2182 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
2183 | |
2184 DropOrthanc(_REMOTE) | |
2185 DropOrthanc(_LOCAL) | |
174 | 2186 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
15 | 2187 UploadInstance(_REMOTE, knee1) |
2188 UploadInstance(_REMOTE, knee2) | |
2189 UploadInstance(_REMOTE, other) | |
2190 WaitEmpty(_REMOTE) | |
174 | 2191 UninstallLuaCallbacks(_REMOTE) |
15 | 2192 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
2193 | |
2194 DropOrthanc(_REMOTE) | |
2195 DropOrthanc(_LOCAL) | |
174 | 2196 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
15 | 2197 UploadInstance(_REMOTE, knee1) |
2198 WaitEmpty(_REMOTE) | |
174 | 2199 UninstallLuaCallbacks(_REMOTE) |
15 | 2200 i = DoGet(_LOCAL, '/instances') |
2201 self.assertEqual(1, len(i)) | |
2202 | |
2203 with tempfile.NamedTemporaryFile(delete = True) as f: | |
2204 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
2205 f.flush() | |
45 | 2206 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
15 | 2207 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
2208 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
2209 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
17 | 2210 |
2211 | |
2212 def test_storescu_rf(self): | |
2213 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
2214 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
2215 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
2216 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
18 | 2217 |
2218 | |
2219 def test_anonymize_instance(self): | |
2220 def AnonymizeAndUpload(instanceId, parameters): | |
2221 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
2222 'application/json'), 'application/dicom')['ID'] | |
2223 | |
2224 def ModifyAndUpload(instanceId, parameters): | |
2225 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
2226 'application/json'), 'application/dicom')['ID'] | |
2227 | |
2228 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
2229 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
2230 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
2231 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
2232 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
2233 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
2234 | |
2235 b = AnonymizeAndUpload(a, '{}') | |
2236 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2237 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2238 | |
2239 # Keep private tag (only OK since Orthanc 0.8.0) | |
2240 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
2241 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2242 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2243 | |
2244 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
2245 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2246 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2247 | |
2248 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
2249 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
2250 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
2251 | |
2252 # Examples from the Wiki | |
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2253 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
18 | 2254 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2255 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2256 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2257 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
2258 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
2259 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2260 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
2261 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2262 | |
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2263 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
18 | 2264 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2265 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2266 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2267 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
2268 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
2269 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2270 | |
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
2271 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
18 | 2272 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
2273 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
2274 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
2275 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
2276 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
2277 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
2278 | |
2279 | |
2280 # Test modify non-existing | |
2281 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2282 json.dumps({ | |
2283 'PatientName' : 'Jodogne', | |
2284 'Modality' : 'CT', | |
2285 }))['ID'] | |
2286 | |
2287 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
2288 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
2289 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
2290 | |
2291 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
2292 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
2293 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
2294 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
2295 | |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2296 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2297 def test_incoming_jpeg(self): |
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2298 def storescu(image, acceptUnknownSopClassUid): |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2299 if acceptUnknownSopClassUid: |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2300 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2301 else: |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2302 tmp = [ '-xs' ] |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2303 |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2304 with open(os.devnull, 'w') as FNULL: |
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2305 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2306 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2307 GetDatabasePath(image) ], |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2308 stderr = FNULL) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2309 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2310 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2311 |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2312 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2313 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2314 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2315 ]) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2316 self.assertTrue('1.2.840.10008.1.2' in a) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2317 self.assertTrue('1.2.840.10008.1.2.1' in a) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2318 self.assertTrue('1.2.840.10008.1.2.2' in a) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2319 self.assertEqual(3, len(a)) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2320 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2321 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2322 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2323 else: |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2324 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2325 |
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2326 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False)) |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2327 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True)) |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2328 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2329 |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2330 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
374 | 2331 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
373
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2332 self.assertGreaterEqual(42, len(a)) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2333 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2334 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2335 else: |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2336 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2337 |
62
f9c4ce95756f
removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
61
diff
changeset
|
2338 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2339 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2340 storescu('UnknownSopClassUid.dcm', True) |
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2341 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2342 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2343 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2344 def test_storescu_jpeg(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2345 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2346 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2347 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
64 | 2348 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
2349 | |
2350 # This is JPEG lossless | |
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2351 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
64 | 2352 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2353 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
64 | 2354 |
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2355 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2356 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2357 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2358 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2359 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2360 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2361 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2362 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2363 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2364 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2365 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2366 DropOrthanc(_REMOTE) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2367 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2368 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2369 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2370 def test_pixel_data(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2371 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2372 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2373 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2374 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2375 phenixSize = 358 * 512 * 2 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2376 colorSize = 1000 * 1000 * 3 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2377 jpegSize = 51918 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2378 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2379 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2380 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2381 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2382 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2383 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2384 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2385 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2386 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2387 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2388 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2389 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2390 def test_decode_brainix(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2391 brainix = [ |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2392 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2393 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2394 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2395 ] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2396 h = '6fb11b932d535c2be04beabd99793ff8' |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2397 maxValue = 426.0 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2398 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2399 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2400 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2401 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2402 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2403 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2404 truth2 = map(lambda x: min(255, x), truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2405 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2406 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2407 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2408 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2409 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2410 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2411 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2412 for i in brainix: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2413 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2414 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2415 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2416 def test_decode_color(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2417 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2418 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2419 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2420 for i in [ imagej, color ]: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2421 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2422 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2423 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2424 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2425 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2426 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2427 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2428 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2429 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2430 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2431 def test_decode_rf(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2432 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2433 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2434 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2435 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2436 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2437 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2438 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2439 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2440 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2441 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2442 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2443 def test_decode_multiframe(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2444 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2445 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2446 # Test the first frame |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2447 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2448 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2449 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2450 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2451 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2452 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2453 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2454 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2455 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2456 # Test the last frame |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2457 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2458 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2459 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2460 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2461 def test_decode_signed(self): |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2462 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2463 minValue = -2000 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2464 maxValue = 4042 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2465 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2466 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2467 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2468 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2469 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2470 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2471 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2472 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2473 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2474 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2475 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2476 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2477 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2478 |
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2479 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
22 | 2480 |
2481 | |
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2482 def test_googlecode_issue_32(self): |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2483 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2484 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2485 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2486 |
22 | 2487 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
2488 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
2489 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
2490 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
2491 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
2492 | |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2493 # Replay the same test using Latin1 as default encoding: This must fail |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2494 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2495 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2496 DoDelete(_REMOTE, '/instances/%s' % f) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2497 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2498 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2499 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2500 |
314 | 2501 # Back to UTF-8 |
2502 self.assertEqual('Utf8', DoPut(_REMOTE, '/tools/default-encoding', 'Utf8')) | |
2503 | |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2504 |
22 | 2505 def test_encodings(self): |
23 | 2506 # Latin-1 (ISO_IR 100) |
22 | 2507 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
2508 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
2509 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
23 | 2510 |
2511 # Latin-2 (ISO_IR 101) | |
2512 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
2513 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
2514 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
2515 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
2516 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
2517 | |
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2518 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2519 def test_storescu_custom_aet(self): |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2520 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2521 # setting of the local AET during C-Store SCU (both in Lua and |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2522 # in the REST API)." |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2523 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2524 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2525 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2526 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2527 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2528 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2529 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2530 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2531 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2532 'LocalAet' : 'YOP', |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2533 'Resources' : [ a['ID'], b['ID'] ] |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2534 }) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2535 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2536 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2537 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2538 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2539 DropOrthanc(_LOCAL) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2540 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2541 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2542 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2543 'Resources' : [ c['ID'] ] |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2544 }) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2545 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2546 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2547 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2548 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2549 DropOrthanc(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2550 DropOrthanc(_LOCAL) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2551 |
174 | 2552 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2553 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2554 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2555 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2556 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2557 WaitEmpty(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2558 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2559 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2560 |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2561 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2562 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2563 WaitEmpty(_REMOTE) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2564 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2565 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2566 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2567 def test_resources_since_limit(self): |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2568 # Upload 16 instances |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2569 for i in range(4): |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2570 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2571 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2572 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2573 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2574 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2575 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2576 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2577 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2578 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2579 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2580 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2581 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2582 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2583 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2584 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2585 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2586 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2587 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2588 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2589 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2590 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2591 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2592 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2593 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2594 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2595 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2596 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2597 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2598 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2599 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2600 s = {} |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2601 since = 0 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2602 while True: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2603 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2604 if len(t) == 0: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2605 break |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2606 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2607 since += len(t) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2608 for i in t: |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2609 s[i] = None |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2610 |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2611 self.assertEqual(16, len(s)) |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2612 for instance in DoGet(_REMOTE, '/instances'): |
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2613 self.assertTrue(instance in s) |
36 | 2614 |
2615 | |
2616 def test_create_pdf(self): | |
2617 # Upload 4 instances | |
2618 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
2619 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
2620 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
2621 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
2622 | |
2623 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
2624 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
2625 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
2626 | |
2627 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
2628 pdf = f.read() | |
2629 | |
2630 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2631 json.dumps({ | |
2632 'Tags' : { | |
2633 'PatientName' : 'Jodogne', | |
2634 'Modality' : 'CT', | |
2635 }, | |
2636 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2637 })) | |
2638 | |
2639 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
2640 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
2641 | |
2642 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
2643 self.assertEqual(len(b), len(pdf) + 1) | |
2644 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
2645 | |
2646 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
2647 json.dumps({ | |
2648 'Parent' : brainixPatient, | |
2649 'Tags' : { | |
2650 'PatientName' : 'Jodogne', | |
2651 } | |
2652 }))) | |
2653 | |
2654 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2655 json.dumps({ | |
2656 'Parent' : brainixPatient, | |
2657 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
2658 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2659 })) | |
2660 | |
2661 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
2662 | |
2663 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2664 json.dumps({ | |
2665 'Parent' : brainixStudy, | |
2666 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
2667 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
2668 })) | |
2669 | |
2670 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
2671 | |
2672 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2673 json.dumps({ | |
2674 'Parent' : brainixEpi, | |
37 | 2675 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
36 | 2676 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
2677 })) | |
2678 | |
2679 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
2680 | |
2681 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
2682 self.assertEqual(len(b), len(pdf)) | |
2683 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
2684 | |
2685 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
38 | 2686 |
2687 | |
2688 def test_create_series(self): | |
2689 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2690 json.dumps({ | |
2691 'Tags' : { | |
40 | 2692 'SpecificCharacterSet' : 'ISO_IR 100', |
2693 'PatientName' : 'Sébastien Jodogne', | |
38 | 2694 'Modality' : 'CT', |
2695 }, | |
2696 'Content' : [ | |
40 | 2697 { |
2698 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
2699 'Tags' : { 'ImageComments' : 'Tutu' } | |
2700 }, | |
38 | 2701 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
2702 ] | |
2703 })) | |
2704 | |
2705 s = DoGet(_REMOTE, i['Path']) | |
2706 self.assertEqual('Series', s['Type']) | |
2707 self.assertEqual(s['ID'], i['ID']) | |
2708 self.assertEqual(2, len(s['Instances'])) | |
39 | 2709 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
2710 self.assertEqual('Complete', s['Status']) | |
40 | 2711 |
2712 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
2713 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
2714 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
2715 if 'ImageComments' in a: | |
2716 self.assertEqual('Tutu', a['ImageComments']) | |
2717 else: | |
2718 self.assertEqual('Tutu', b['ImageComments']) | |
2719 | |
2720 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
2721 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
2722 'Sébastien Jodogne') | |
47 | 2723 |
2724 | |
2725 def test_create_binary(self): | |
2726 binary = ''.join(map(chr, range(256))) | |
2727 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
2728 tags = { | |
2729 'PatientName' : 'Jodogne', | |
2730 '8899-8899' : encoded | |
2731 } | |
2732 | |
2733 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2734 json.dumps({ | |
266 | 2735 'Tags' : tags, |
2736 'PrivateCreator' : 'TestBinary', | |
47 | 2737 })) |
2738 | |
2739 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
2740 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
2741 | |
2742 i = DoPost(_REMOTE, '/tools/create-dicom', | |
2743 json.dumps({ | |
2744 'InterpretBinaryTags' : False, | |
266 | 2745 'Tags' : tags, |
2746 'PrivateCreator' : 'TestBinary', | |
47 | 2747 })) |
2748 | |
2749 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
2750 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2751 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2752 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2753 def test_patient_ids_collision(self): |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2754 # Upload 3 instances from 3 different studies, but with the |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2755 # same PatientID |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2756 for i in range(3): |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2757 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2758 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2759 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2760 'Query' : { 'PatientName' : '*' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2761 self.assertEqual(1, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2762 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2763 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2764 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2765 'CaseSensitive' : True, |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2766 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2767 self.assertEqual(2, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2768 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2769 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2770 'CaseSensitive' : False, |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2771 'Query' : { 'PatientName' : 'Foo' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2772 self.assertEqual(1, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2773 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2774 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2775 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2776 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2777 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2778 'Query' : { 'PatientName' : '*' }}) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2779 self.assertEqual(3, len(a)) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2780 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2781 self.assertTrue('FOO^SERIES' in d) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2782 self.assertTrue('HELLO^SERIES' in d) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2783 self.assertTrue('WORLD^SERIES' in d) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2784 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2785 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2786 self.assertEqual(1, len(set(d))) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2787 self.assertEqual('COMMON', d[0]) |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2788 |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2789 for i in a: |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2790 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2791 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
2792 self.assertEqual('%s^SERIES' % p, d) |
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2793 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2794 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2795 def test_bitbucket_issue_4(self): |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2796 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2797 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2798 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2799 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2800 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2801 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2802 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2803 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2804 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2805 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2806 p = DoGet(_REMOTE, '/patients') |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2807 self.assertEqual(2, len(p)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2808 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2809 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2810 self.assertEqual(3, len(i1)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2811 self.assertEqual(3, len(i2)) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2812 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2813 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2814 |
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
2815 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2816 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2817 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2818 def test_create_sequence(self): |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2819 i = DoPost(_REMOTE, '/tools/create-dicom', |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2820 json.dumps({ |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2821 'Tags' : { |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2822 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2823 'PatientName': 'Jodogne^', |
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2824 'ReferencedStudySequence': GenerateTestSequence(), |
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2825 } |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2826 }))['ID'] |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2827 |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2828 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2829 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2830 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2831 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2832 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
2833 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2834 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2835 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2836 def test_modify_sequence(self): |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2837 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2838 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2839 |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2840 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2841 json.dumps({ |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2842 "Replace" : { |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2843 "PatientName" : "hello", |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2844 'ReferencedStudySequence': GenerateTestSequence(), |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2845 }, |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2846 }), |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2847 'application/json') |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2848 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2849 DoDelete(_REMOTE, '/instances/%s' % i) |
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
2850 |
52 | 2851 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
2852 | |
2853 | |
2854 def test_compression(self): | |
2855 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
2856 | |
2857 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % i)[1] | |
2858 | |
2859 # "StorageCompression" is enabled in the Orthanc to be tested, | |
2860 # uncompress the data before running the test | |
2861 if DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i) != 0: | |
2862 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i) | |
2863 | |
2864 cs = DoGet(_REMOTE, '/statistics')['TotalDiskSize'] | |
2865 us = DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'] | |
2866 size = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i) | |
2867 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i) | |
2868 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1]) | |
2869 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i)) | |
2870 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i)) | |
2871 | |
2872 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % i) | |
2873 self.assertTrue('compress' in ops) | |
2874 self.assertTrue('uncompress' in ops) | |
2875 self.assertTrue('is-compressed' in ops) | |
2876 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i)) | |
2877 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i) | |
2878 | |
2879 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/compress' % i) | |
2880 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i) | |
2881 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i)) | |
2882 self.assertLess(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
2883 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
2884 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])) | |
2885 self.assertGreater(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i)) | |
2886 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i)) | |
2887 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i)) | |
2888 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i)) | |
2889 | |
2890 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i) | |
2891 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i) | |
2892 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i)) | |
2893 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1]) | |
2894 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i)) | |
2895 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i)) | |
2896 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i)) | |
2897 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i)) | |
2898 self.assertEqual(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
2899 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
53 | 2900 |
2901 | |
2902 def test_ordered_slices(self): | |
2903 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
2904 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
2905 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
2906 self.assertEqual('Sequence', o['Type']) | |
2907 self.assertEqual(1, len(o['Dicom'])) | |
2908 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
2909 self.assertEqual(76, len(o['Slices'])) | |
2910 for j in range(76): | |
2911 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
2912 | |
68 | 2913 self.assertEqual(1, len(o['SlicesShort'])) |
2914 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
2915 self.assertEqual(0, o['SlicesShort'][0][1]) | |
2916 self.assertEqual(76, o['SlicesShort'][0][2]) | |
2917 | |
53 | 2918 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
2919 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
2920 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
2921 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
2922 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
2923 | |
2924 self.assertEqual('Volume', o['Type']) | |
2925 self.assertEqual(3, len(o['Dicom'])) | |
2926 self.assertEqual(3, len(o['Slices'])) | |
2927 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
2928 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
2929 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
2930 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
2931 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
2932 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
2933 | |
68 | 2934 self.assertEqual(3, len(o['SlicesShort'])) |
2935 self.assertEqual(k, o['SlicesShort'][0][0]) | |
2936 self.assertEqual(0, o['SlicesShort'][0][1]) | |
2937 self.assertEqual(1, o['SlicesShort'][0][2]) | |
2938 self.assertEqual(j, o['SlicesShort'][1][0]) | |
2939 self.assertEqual(0, o['SlicesShort'][1][1]) | |
2940 self.assertEqual(1, o['SlicesShort'][1][2]) | |
2941 self.assertEqual(i, o['SlicesShort'][2][0]) | |
2942 self.assertEqual(0, o['SlicesShort'][2][1]) | |
2943 self.assertEqual(1, o['SlicesShort'][2][2]) | |
2944 | |
53 | 2945 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
2946 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
2947 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
2948 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
2949 | |
2950 self.assertEqual('Sequence', o['Type']) | |
2951 self.assertEqual(2, len(o['Dicom'])) | |
2952 self.assertEqual(2, len(o['Slices'])) | |
2953 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
2954 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
2955 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
2956 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2957 |
68 | 2958 self.assertEqual(2, len(o['SlicesShort'])) |
2959 self.assertEqual(i, o['SlicesShort'][0][0]) | |
2960 self.assertEqual(0, o['SlicesShort'][0][1]) | |
2961 self.assertEqual(1, o['SlicesShort'][0][2]) | |
2962 self.assertEqual(j, o['SlicesShort'][1][0]) | |
2963 self.assertEqual(0, o['SlicesShort'][1][1]) | |
2964 self.assertEqual(1, o['SlicesShort'][1][2]) | |
2965 | |
2966 | |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2967 |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2968 def test_incoming_movescu_accession(self): |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2969 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2970 |
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
2971 # No matching patient, so no job is created |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2972 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2973 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2974 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2975 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2976 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
2977 |
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
2978 # 1 Matching patient, track the job |
138 | 2979 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
2980 '--study', | |
2981 '-k', '0008,0052=STUDY', | |
2982 '-k', 'AccessionNumber=A10003245599' | |
2983 ]))) | |
137
412d5f70447e
testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
136
diff
changeset
|
2984 |
54
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2985 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
2986 |
55 | 2987 |
2988 def test_dicom_to_json(self): | |
2989 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
2990 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
2991 |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
2992 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
2993 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
2994 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
123 | 2995 # Tags for compatibility with DCMTK 3.6.0 |
2996 'RETIRED_OtherPatientIDs', | |
2997 'OtherPatientIDs', | |
2998 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
2999 ])) |
55 | 3000 |
3001 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
3002 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3003 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3004 ])) |
55 | 3005 |
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3006 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3007 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3008 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3009 ])) |
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3010 |
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3011 |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3012 # NB: To get the actual value of the "tags" JSON file, use the |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3013 # following command: |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3014 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3015 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3016 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3017 a = json.loads(f.read()) |
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3018 |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3019 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3020 # attachments are truncated starting with PixelData |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3021 if not '7fe1,0010' in t: |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3022 del a['7fe1,0010'] |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3023 del a['7fe1,1001'] |
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3024 |
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3025 aa = json.dumps(a).replace('2e+022', '2e+22') |
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3026 tt = (json.dumps(t) |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3027 .replace('2e+022', '2e+22') |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3028 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3029 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3030 self.assertEqual(aa, tt) |
57 | 3031 |
3032 | |
3033 def test_batch_archive(self): | |
3034 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
3035 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
3036 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
3037 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
3038 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
3039 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
3040 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
3041 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
3042 | |
3043 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
3044 z = zipfile.ZipFile(StringIO(s), "r") | |
3045 self.assertEqual(0, len(z.namelist())) | |
3046 | |
3047 # One patient | |
3048 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
3049 z = zipfile.ZipFile(StringIO(s), "r") | |
3050 self.assertEqual(4, len(z.namelist())) | |
3051 | |
3052 # One patient + twice its study + one series from other patient | |
3053 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
3054 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
3055 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
3056 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
3057 ]) | |
3058 z = zipfile.ZipFile(StringIO(s), "r") | |
3059 self.assertEqual(6, len(z.namelist())) | |
3060 | |
3061 # One patient + one series + one instance | |
3062 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
3063 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
3064 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
3065 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
3066 ]) | |
3067 z = zipfile.ZipFile(StringIO(s), "r") | |
3068 self.assertEqual(7, len(z.namelist())) | |
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3069 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3070 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3071 def test_decode_brainix_as_jpeg(self): |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3072 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3073 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3074 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3075 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3076 self.assertEqual(j.size[0], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3077 self.assertEqual(j.size[1], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3078 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3079 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3080 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3081 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3082 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3083 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3084 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3085 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3086 self.assertEqual('PNG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3087 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3088 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3089 self.assertEqual('JPEG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3090 self.assertEqual(j.size[0], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3091 self.assertEqual(j.size[1], 256) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3092 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3093 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3094 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3095 self.assertLess(a, b) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3096 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3097 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3098 self.assertEqual('JPEG', j.format) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3099 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3100 # 16bit encoding is not supported with JPEG |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3101 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3102 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3103 |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3104 # No matching content type |
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3105 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3106 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3107 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3108 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3109 def test_media_encodings(self): |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3110 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3111 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3112 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3113 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3114 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3115 z = zipfile.ZipFile(StringIO(tmp), "r") |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3116 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3117 self.assertEqual(4, len(z.namelist())) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3118 self.assertTrue('IMAGES/IM0' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3119 self.assertTrue('IMAGES/IM1' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3120 self.assertTrue('IMAGES/IM2' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3121 self.assertTrue('DICOMDIR' in z.namelist()) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3122 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3123 try: |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3124 os.remove('/tmp/DICOMDIR') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3125 except: |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3126 # The file does not exist |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3127 pass |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3128 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3129 z.extract('DICOMDIR', '/tmp') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3130 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3131 stderr = subprocess.STDOUT).split('\n') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3132 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3133 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3134 stderr = subprocess.STDOUT).split('\n') |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3135 self.assertEqual(1, len(a)) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3136 self.assertEqual('', a[0]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3137 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3138 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3139 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3140 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3141 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3142 |
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3143 os.remove('/tmp/DICOMDIR') |
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3144 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3145 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3146 def test_findscu_counters(self): |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3147 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3148 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3149 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3150 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3151 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3152 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3153 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3154 self.assertTrue('1 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3155 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3156 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3157 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3158 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3159 self.assertTrue('2 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3160 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3161 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3162 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3163 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3164 self.assertTrue('3 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3165 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3166 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3167 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3168 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3169 self.assertTrue('2 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3170 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3171 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3172 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3173 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3174 self.assertTrue('3 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3175 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3176 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3177 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3178 self.assertEqual(2, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3179 self.assertTrue('1 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3180 self.assertTrue('2 ' in s) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3181 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3182 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3183 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3184 self.assertEqual(1, len(s)) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3185 t = map(lambda x: x.strip(), s[0].split('\\')) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3186 self.assertTrue('PT' in t) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3187 self.assertTrue('CT' in t) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3188 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3189 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3190 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3191 self.assertEqual(1, len(s)) |
176
48cc188ffb09
strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents:
175
diff
changeset
|
3192 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3193 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3194 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3195 |
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3196 |
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3197 def test_decode_transfer_syntax(self): |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3198 def Check(t, md5): |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3199 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3200 |
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3201 if t != '1.2.840.10008.1.2': # This file has no meta header |
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3202 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3203 self.assertEqual(t, transferSyntax) |
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3204 |
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3205 if md5 == None: |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3206 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3207 else: |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3208 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3209 self.assertEqual(m, md5) |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3210 |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3211 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3212 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
323 | 3213 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone |
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3214 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3215 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3216 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3217 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3218 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3219 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3220 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3221 |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3222 # JPEG2k image, not supported without GDCM plugin |
304 | 3223 if not HasGdcmPlugin(_REMOTE): |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3224 Check('1.2.840.10008.1.2.4.90', None) |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
3225 Check('1.2.840.10008.1.2.4.91', None) |
79 | 3226 |
3227 | |
3228 def test_raw_frame(self): | |
3229 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
3230 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3231 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3232 self.assertEqual(512 * 512 * 2, len(a)) | |
3233 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
3234 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
3235 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
3236 | |
3237 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
3238 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3239 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
3240 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
3241 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
3242 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3243 self.assertEqual("L", im.mode) | |
3244 self.assertEqual(512, im.size[0]) | |
3245 self.assertEqual(512, im.size[1]) | |
3246 | |
3247 # Test an image with 2 JPEG frames spread over multiple fragments | |
3248 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
3249 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
3250 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3251 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
3252 self.assertEqual(69214, len(a)) | |
3253 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
3254 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
3255 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
3256 self.assertEqual("RGB", im.mode) | |
3257 self.assertEqual(512, im.size[0]) | |
3258 self.assertEqual(512, im.size[1]) | |
323 | 3259 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
79 | 3260 self.assertEqual("RGB", im.mode) |
3261 self.assertEqual(512, im.size[0]) | |
3262 self.assertEqual(512, im.size[1]) | |
81 | 3263 |
3264 | |
3265 | |
3266 def test_rest_movescu(self): | |
3267 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3268 | |
3269 # Upload 4 instances | |
3270 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
3271 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
3272 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
3273 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
3274 | |
3275 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
3276 for p in DoGet(_REMOTE, '/patients'): | |
3277 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
3278 DoDelete(_REMOTE, '/patients/%s' % p) | |
3279 | |
3280 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3281 | |
3282 # Upload instance Brainix/Flair/IM-0001-0001.dcm | |
3283 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance', | |
3284 'Resources' : [ | |
3285 { | |
3286 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3287 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
3288 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', | |
3289 } | |
3290 ]}) | |
3291 | |
3292 # Upload series Brainix/Flair/* | |
3293 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
3294 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3295 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
3296 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
3297 | |
3298 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
3299 'Resources' : [ | |
3300 { | |
3301 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3302 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
3303 } | |
3304 ]}) | |
3305 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
3306 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3307 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
3308 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
3309 | |
3310 # Upload series Brainix/Epi/* | |
3311 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', | |
3312 'Resources' : [ | |
3313 { | |
3314 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3315 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
3316 } | |
3317 ]}) | |
3318 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
3319 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
3320 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
3321 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
3322 | |
3323 # Upload study Knee/* | |
3324 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
3325 'Resources' : [ | |
3326 { | |
3327 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
3328 } | |
3329 ]}) | |
3330 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
3331 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
3332 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
3333 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
3334 | |
3335 # Reset | |
3336 for p in DoGet(_REMOTE, '/patients'): | |
3337 DoDelete(_REMOTE, '/patients/%s' % p) | |
3338 | |
3339 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
3340 | |
3341 | |
3342 # Upload all at once | |
3343 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study', | |
3344 'Resources' : [ | |
3345 { | |
3346 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
3347 }, | |
3348 { | |
3349 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
3350 } | |
3351 ]}) | |
3352 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
3353 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
3354 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) | |
3355 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
3356 | |
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3357 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3358 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3359 def test_reconstruct_json(self): |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3360 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3361 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3362 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3363 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3364 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3365 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3366 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3367 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3368 # Cannot delete the "DICOM" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3369 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3370 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3371 # Can delete the "DICOM as JSON" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3372 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3373 self.assertTrue(type(r) is dict and len(r) == 0) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3374 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3375 # Only the "DICOM" attachment subsists |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3376 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3377 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3378 # Cannot manually reconstruct the "DICOM as JSON" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3379 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3380 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3381 # Transparently reconstruct the "DICOM as JSON" attachment |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3382 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3383 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3384 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3385 |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3386 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3387 self.assertEqual(str(first), str(second)) |
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3388 self.assertEqual(str(first), str(third)) |
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3389 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3390 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3391 def test_reconstruct_json2(self): |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3392 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3393 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3394 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3395 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3396 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3397 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3398 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3399 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3400 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3401 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3402 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3403 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3404 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3405 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3406 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3407 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3408 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3409 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3410 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3411 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3412 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3413 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3414 |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3415 def test_private_tags(self): |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3416 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3417 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3418 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3419 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3420 |
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3421 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3422 def test_findscu_encoding(self): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3423 # Check out ../Database/Encodings/Generate.sh |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3424 TEST = u'Test-éüäöòДΘĝדصķћ๛ネİ' |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3425 ENCODINGS = { |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3426 'Arabic' : [ 'ISO_IR 127' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3427 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3428 'Cyrillic' : [ 'ISO_IR 144' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3429 'Greek' : [ 'ISO_IR 126' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3430 'Hebrew' : [ 'ISO_IR 138' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3431 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3432 'Latin1' : [ 'ISO_IR 100' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3433 'Latin2' : [ 'ISO_IR 101' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3434 'Latin3' : [ 'ISO_IR 109' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3435 'Latin4' : [ 'ISO_IR 110' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3436 'Latin5' : [ 'ISO_IR 148' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3437 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3438 'Utf8' : [ 'ISO_IR 192' ], |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3439 } |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3440 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3441 for name in ENCODINGS.iterkeys(): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3442 if len(ENCODINGS[name]) == 1: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3443 ENCODINGS[name].append(name.lower()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3444 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3445 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3446 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3447 for name in ENCODINGS.iterkeys(): |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3448 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3449 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3450 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3451 i = CallFindScu([ '-k', '0008,0052=STUDY', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3452 '-k', 'SpecificCharacterSet', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3453 '-k', 'PatientName' ]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3454 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3455 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3456 self.assertEqual(1, len(characterSet)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3457 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3458 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3459 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3460 self.assertEqual(1, len(patientName)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3461 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3462 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3463 self.assertEqual(expected, patientName[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3464 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3465 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3466 #for master in ENCODINGS: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3467 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3468 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3469 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3470 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3471 for name in ENCODINGS: |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3472 DropOrthanc(_REMOTE) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3473 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3474 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3475 i = CallFindScu([ '-k', '0008,0052=STUDY', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3476 '-k', 'PatientID', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3477 '-k', 'SpecificCharacterSet', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3478 '-k', 'PatientName' ]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3479 i = i.decode(ENCODINGS[master][1]) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3480 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3481 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3482 self.assertEqual(1, len(characterSet)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3483 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3484 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3485 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3486 self.assertEqual(1, len(patientId)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3487 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3488 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3489 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3490 self.assertEqual(1, len(patientName)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3491 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3492 tmp = ENCODINGS[name][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3493 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3494 tmp = ENCODINGS[master][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3495 expected = expected.encode(tmp, 'ignore').decode(tmp) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3496 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3497 self.assertEqual(expected, patientName[0].strip()) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3498 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3499 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3500 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3501 'Level' : 'Study', |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3502 'Query' : { }}) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3503 self.assertEqual(1, len(a)) |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3504 |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3505 tmp = ENCODINGS[name][1] |
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
3506 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3507 |
314 | 3508 # Back to UTF-8 |
3509 self.assertEqual('Utf8', DoPut(_REMOTE, '/tools/default-encoding', 'Utf8')) | |
3510 | |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3511 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3512 def test_reconstruct(self): |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3513 def CompareMainDicomTag(expected, instance, level, tag): |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3514 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3515 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3516 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3517 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3518 studies = DoGet(_REMOTE, '/studies/') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3519 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3520 self.assertEqual(1, len(studies)) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3521 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3522 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3523 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3524 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3525 "Replace" : { |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3526 "StudyDescription" : "hello", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3527 "SeriesDescription" : "world", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3528 "SOPClassUID" : "test", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3529 "SOPInstanceUID" : "myid", |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3530 }, |
119 | 3531 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
3532 "Force" : True | |
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3533 }) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3534 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3535 instances = DoGet(_REMOTE, '/instances/') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3536 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3537 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3538 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3539 self.assertEqual(2, len(instances)) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3540 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3541 b = instances[0] if instances[1] == a else instances[1] |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3542 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3543 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3544 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3545 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3546 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3547 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip()) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3548 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip()) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3549 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3550 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {}) |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3551 |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3552 CompareMainDicomTag('hello', a, 'study', 'StudyDescription') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3553 CompareMainDicomTag('world', a, 'series', 'SeriesDescription') |
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
3554 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID') |
102 | 3555 |
104 | 3556 def test_httpClient_lua(self): |
3557 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: | |
102 | 3558 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua') |
3559 | |
3560 self.assertIn('OK', result) | |
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3561 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3562 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3563 def test_bitbucket_issue_44(self): |
319 | 3564 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
107
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3565 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3566 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3567 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3568 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3569 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3570 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3571 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3572 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3573 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3574 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3575 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3576 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3577 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3578 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3579 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3580 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3581 self.assertEqual("L", im.mode) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3582 self.assertEqual(2010, im.size[0]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3583 self.assertEqual(2446, im.size[1]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3584 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3585 # This is the chest image, with MONOCHROME1. Raw background is |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3586 # white (255), should be rendered as black (0) => invert |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3587 if i == monochrome1_jpeg: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3588 # Add some tolerance because of JPEG destructive compression |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3589 self.assertGreater(10, im.getpixel((0,0))) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3590 else: |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3591 self.assertEqual(0, im.getpixel((0,0))) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3592 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3593 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3594 self.assertEqual("L", im.mode) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3595 self.assertEqual(1572, im.size[0]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3596 self.assertEqual(2010, im.size[1]) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3597 |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3598 # This is the key image, with MONOCHROME2. Raw background is |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3599 # white (255), should be rendered as white (255) |
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
3600 self.assertEqual(255, im.getpixel((0,0))) |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3601 |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3602 |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3603 def test_bitbucket_issue_42(self): |
319 | 3604 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
123 | 3605 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3606 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3607 modified = DoPost(_REMOTE, |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3608 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
119 | 3609 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3610 'application/json') |
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3611 self.assertTrue('PatientID' in modified) |
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3612 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3613 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3614 def test_rest_find_limit(self): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3615 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
319 | 3616 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
3617 |
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3618 # Upload 6 instances |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3619 brainix = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3620 knee = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3621 for i in range(2): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3622 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3623 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3624 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3625 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3626 # Check using BRAINIX |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3627 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3628 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3629 'Limit' : 10 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3630 self.assertEqual(4, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3631 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3632 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3633 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3634 'Limit' : 4 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3635 self.assertEqual(4, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3636 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3637 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3638 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3639 'Since' : 2, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3640 'Limit' : 4 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3641 self.assertEqual(2, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3642 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3643 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3644 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3645 'Limit' : 3 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3646 self.assertEqual(3, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3647 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3648 b = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3649 for i in range(4): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3650 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3651 'Query' : { 'PatientName' : 'B*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3652 'Limit' : 1, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3653 'Since' : i }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3654 self.assertEqual(1, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3655 b.append(a[0]) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3656 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3657 # Check whether the two sets are equal through symmetric difference |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3658 self.assertEqual(0, len(set(b) ^ set(brainix))) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3659 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3660 # Check using KNEE |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3661 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3662 'Query' : { 'PatientName' : 'K*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3663 'Limit' : 10 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3664 self.assertEqual(2, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3665 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3666 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3667 'Query' : { 'PatientName' : 'K*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3668 'Limit' : 2 }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3669 self.assertEqual(2, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3670 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3671 b = [] |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3672 for i in range(2): |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3673 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3674 'Query' : { 'PatientName' : 'K*' }, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3675 'Limit' : 1, |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3676 'Since' : i }) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3677 self.assertEqual(1, len(a)) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3678 b.append(a[0]) |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3679 |
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
3680 self.assertEqual(0, len(set(b) ^ set(knee))) |
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3681 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3682 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3683 def test_bitbucket_issue_46(self): |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3684 # "PHI remaining after anonymization" |
319 | 3685 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3686 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3687 def GetAnonymizedTags(study, version): |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3688 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3689 { 'DicomVersion' : version }, |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3690 'application/json') ['ID'] |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3691 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3692 self.assertEqual(1, len(a)) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3693 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3694 instance = a[0]['ID'] |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3695 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3696 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3697 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3698 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3699 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3700 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3701 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3702 # (Patient's Mother's Birth Name) tags |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3703 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3704 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3705 'application/json')['ID'] |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3706 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3707 # Use Table E.1-1 from PS 3.15-2008 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3708 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3709 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3710 self.assertTrue('0032,1033' in tags) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3711 self.assertTrue('0010,1060' in tags) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3712 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3713 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3714 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3715 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3716 self.assertFalse('0032,1033' in tags) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3717 self.assertFalse('0010,1060' in tags) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3718 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3719 t = {} |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3720 for (key, value) in tags.iteritems(): |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3721 t[value['Name']] = value['Value'] |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3722 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3723 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3724 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3725 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3726 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3727 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3728 |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3729 with tempfile.NamedTemporaryFile(delete = True) as f: |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3730 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3731 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3732 f.flush() |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3733 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
3734 stderr = subprocess.STDOUT).split('\n') |
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3735 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3736 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3737 def test_bitbucket_issue_55(self): |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3738 def Run(modify, query): |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3739 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3740 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3741 operation = 'modify' if modify else 'anonymize' |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3742 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3743 self.assertRaises(Exception, lambda: DoPost( |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3744 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3745 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3746 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3747 query["Force"] = True |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3748 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3749 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3750 DoDelete(_REMOTE, a) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3751 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3752 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3753 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3754 UploadInstance(_REMOTE, 'DummyCT.dcm') |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3755 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3756 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3757 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3758 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3759 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3760 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3761 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3762 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3763 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3764 |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3765 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3766 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3767 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
3768 |
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3769 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3770 def test_bitbucket_issue_56(self): |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3771 # Case-insensitive matching over accents. This test assumes |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3772 # that the "CaseSensitivePN" configuration option of Orthanc |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3773 # is set to "false" (default value). |
319 | 3774 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3775 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3776 def Check(name, expected, expectedSensitive): |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3777 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3778 '-k', '0008,0052=PATIENT', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3779 '-k', 'PatientName=%s' % name ]) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3780 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3781 self.assertEqual(expected, len(patientNames)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3782 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3783 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3784 'CaseSensitive' : False, |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3785 'Query' : { 'PatientName' : name }}) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3786 self.assertEqual(expected, len(a)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3787 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3788 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3789 'CaseSensitive' : True, |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3790 'Query' : { 'PatientName' : name }}) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3791 self.assertEqual(expectedSensitive, len(a)) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3792 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3793 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3794 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3795 # WildcardConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3796 Check('TeSt*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3797 Check('TeSt-a*', 0, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3798 Check('TeSt-É*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3799 Check('TeSt-é*', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3800 Check('Test-é*', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3801 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3802 # ListConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3803 Check('Test-éüäöò\\nope', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3804 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3805 |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3806 # ValueConstraint |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3807 Check('Test-éüäöò', 1, 1) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3808 Check('Test-ÉÜÄÖÒ', 1, 0) |
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
3809 |
125 | 3810 |
3811 def test_gbk_alias(self): | |
3812 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
3813 # This test fails on Orthanc <= 1.3.0 | |
3814 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
3815 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
3816 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
3817 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
126 | 3818 |
3819 | |
3820 def test_long_tag(self): | |
3821 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
3822 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
3823 | |
3824 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
3825 self.assertTrue('0018,1020' in tags) | |
3826 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
3827 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
3828 self.assertEqual(None, tags['0018,1020']['Value']) | |
3829 | |
3830 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
3831 self.assertTrue('0018,1020' in tags) | |
3832 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
3833 self.assertEqual('String', tags['0018,1020']['Type']) | |
3834 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
3835 | |
3836 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
3837 self.assertTrue('SoftwareVersions' in tags) | |
3838 self.assertEqual(None, tags['SoftwareVersions']) | |
3839 self.assertTrue('HeartRate' in tags) | |
3840 self.assertEqual(474, int(tags['HeartRate'])) | |
3841 | |
3842 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
3843 self.assertTrue('SoftwareVersions' in tags) | |
3844 self.assertEqual(None, tags['SoftwareVersions']) | |
3845 | |
3846 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
3847 self.assertTrue('SoftwareVersions' in tags) | |
3848 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
3849 | |
3850 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
3851 self.assertTrue('SoftwareVersions' in tags) | |
3852 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
3853 | |
3854 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
3855 self.assertEqual(1, len(tags)) | |
3856 self.assertTrue(i in tags.keys()) | |
3857 self.assertTrue('0018,1020' in tags[i]) | |
3858 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
3859 | |
3860 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
3861 self.assertEqual(1, len(tags)) | |
3862 self.assertTrue(i in tags.keys()) | |
3863 self.assertTrue('0018,1020' in tags[i]) | |
3864 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
3865 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
3866 | |
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3867 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3868 def test_extended_media(self): |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3869 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3870 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3871 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3872 self.assertEqual(2, len(z.namelist())) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3873 self.assertTrue('IMAGES/IM0' in z.namelist()) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3874 self.assertTrue('DICOMDIR' in z.namelist()) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3875 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3876 try: |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3877 os.remove('/tmp/DICOMDIR') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3878 except: |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3879 # The file does not exist |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3880 pass |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3881 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3882 z.extract('DICOMDIR', '/tmp') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3883 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3884 stderr = subprocess.STDOUT).split('\n') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3885 self.assertEqual(5, len(a)) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3886 self.assertTrue(a[0].startswith('Warning')) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3887 self.assertEqual('BasicDirectory', a[1]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3888 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3889 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3890 self.assertEqual('', a[4]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3891 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3892 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3893 stderr = subprocess.STDOUT).split('\n') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3894 self.assertEqual(1, len(a)) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3895 self.assertEqual('', a[0]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3896 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3897 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3898 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3899 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3900 # Check the presence of the series description (extended tag) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3901 self.assertTrue(re.search('T1W_aTSE', a) != None) |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3902 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3903 os.remove('/tmp/DICOMDIR') |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3904 |
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
3905 |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3906 def test_anonymize_relationships_1(self): |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3907 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3908 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3909 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3910 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3911 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3912 '{}', |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3913 'application/json')['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3914 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3915 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3916 self.assertEqual(2, len(a)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3917 a1 = a[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3918 a2 = a[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3919 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3920 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3921 self.assertEqual(2, len(b)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3922 b1 = b[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3923 b2 = b[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3924 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3925 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3926 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3927 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3928 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3929 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3930 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3931 DoGet(_REMOTE, FRAME % a2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3932 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3933 DoGet(_REMOTE, FRAME % b2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3934 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3935 DoGet(_REMOTE, FRAME % b1)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3936 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3937 DoGet(_REMOTE, FRAME % b2)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3938 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3939 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3940 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3941 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3942 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3943 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3944 for i in range(3): |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3945 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3946 DoGet(_REMOTE, SOP % (a2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3947 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3948 DoGet(_REMOTE, SOP % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3949 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3950 DoGet(_REMOTE, SOP % (b1, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3951 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3952 DoGet(_REMOTE, SOP % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3953 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3954 DoGet(_REMOTE, CLASS % (b1, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3955 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3956 DoGet(_REMOTE, CLASS % (b2, i))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3957 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3958 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3959 def test_anonymize_relationships_2(self): |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3960 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3961 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3962 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3963 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3964 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3965 '{}', |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3966 'application/json')['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3967 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3968 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3969 self.assertEqual(2, len(a)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3970 a1 = a[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3971 a2 = a[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3972 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3973 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3974 self.assertEqual(2, len(b)) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3975 b1 = b[0]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3976 b2 = b[1]['ID'] |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3977 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3978 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3979 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3980 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3981 |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3982 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3983 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3984 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3985 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3986 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3987 DoGet(_REMOTE, SOP % (a2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3988 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3989 DoGet(_REMOTE, SOP % (b2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3990 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3991 DoGet(_REMOTE, SOP % (b1, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3992 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3993 DoGet(_REMOTE, SOP % (b2, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3994 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3995 DoGet(_REMOTE, CLASS % (b1, 0))) |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3996 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
3997 DoGet(_REMOTE, CLASS % (b2, 0))) |
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3998 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
3999 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4000 def test_anonymize_relationships_3(self): |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4001 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4002 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4003 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4004 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4005 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4006 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4007 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4008 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4009 self.assertEqual(2, len(a)) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4010 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4011 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4012 sr2 = a[0]['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4013 mr2 = a[1]['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4014 else: |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4015 sr2 = a[1]['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4016 mr2 = a[0]['ID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4017 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4018 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4019 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4020 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4021 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4022 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4023 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4024 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4025 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4026 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4027 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4028 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4029 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4030 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4031 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4032 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4033 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4034 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4035 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4036 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4037 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4038 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4039 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4040 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4041 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4042 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4043 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4044 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4045 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4046 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4047 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4048 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4049 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4050 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4051 |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4052 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4053 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4054 self.assertEqual(str(content1), str(content2)) |
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4055 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4056 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4057 def test_bitbucket_issue_94(self): |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4058 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
319 | 4059 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4060 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4061 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4062 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4063 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4064 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4065 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4066 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4067 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4068 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4069 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4070 self.assertEqual(1, len(a)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4071 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4072 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4073 self.assertEqual(1, len(b)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4074 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4075 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4076 self.assertEqual(1, len(c)) |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4077 |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4078 self.assertEqual(a, b) # Modified DICOM |
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4079 self.assertNotEqual(a, c) # Anonymized DICOM |
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4080 |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4081 |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4082 def test_metadata_origin(self): |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4083 # Upload using the REST API |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4084 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4085 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4086 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4087 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4088 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
315 | 4089 |
4090 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
4091 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
4092 | |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4093 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4094 self.assertEqual('RestApi', m['Origin']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4095 self.assertEqual('', m['RemoteAET']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4096 self.assertNotEqual('', m['RemoteIP']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4097 self.assertFalse('CalledAET' in m) |
315 | 4098 self.assertTrue('HttpUsername' in m) |
4099 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4100 |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4101 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4102 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4103 self.assertEqual('1', m['IndexInSeries']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4104 self.assertTrue('ReceptionDate' in m) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4105 |
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4106 DoDelete(_REMOTE, '/instances/%s' % i) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4107 |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4108 # Upload using the DICOM protocol |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4109 subprocess.check_call([ FindExecutable('storescu'), |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4110 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4111 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4112 '-xw' ]) # Propose JPEG2000 |
143
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4113 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4114 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4115 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4116 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
28d50ffac07d
test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
142
diff
changeset
|
4117 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
144
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4118 |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4119 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4120 self.assertEqual('DicomProtocol', m['Origin']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4121 self.assertEqual('STORESCU', m['RemoteAET']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4122 self.assertNotEqual('', m['RemoteIP']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4123 self.assertEqual('ANY-SCP', m['CalledAET']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4124 self.assertFalse('HttpUsername' in m) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4125 |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4126 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4127 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4128 self.assertEqual('1', m['IndexInSeries']) |
7809fdf8056f
testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
143
diff
changeset
|
4129 self.assertTrue('ReceptionDate' in m) |
147 | 4130 |
4131 | |
4132 def test_lua_deadlock(self): | |
4133 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
4134 # is with the lua script I'm using for conversion of images to | |
4135 # JPEG2000. When the script is used with 1.4.0 the first | |
4136 # instance appears to be stored and then everything just | |
4137 # halts, ie Orthanc wont respond to anything after that." | |
4138 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
174 | 4139 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
147 | 4140 |
4141 subprocess.check_call([ FindExecutable('storescu'), | |
4142 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
4143 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
4144 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
4145 ]) | |
4146 | |
4147 instances = DoGet(_REMOTE, '/instances') | |
4148 self.assertEqual(2, len(instances)) | |
4149 | |
4150 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
4151 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
175 | 4152 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
147 | 4153 self.assertEqual(t1, t2); |
154
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4154 |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4155 |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4156 def test_find_group_length(self): |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4157 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4158 # one of the Generic Group Length tags (*, 0x0000) |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4159 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4160 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4161 self.assertFalse('UnableToProcess' in result) |
4a533d003080
test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
147
diff
changeset
|
4162 self.assertFalse('E:' in result) |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4163 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4164 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4165 def test_split(self): |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4166 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4167 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
254
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4168 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4169 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4170 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4171 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4172 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4173 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4174 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4175 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4176 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4177 info = DoGet(_REMOTE, '/studies/%s' % study) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4178 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4179 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4180 job = MonitorJob2(_REMOTE, lambda: DoPost |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4181 (_REMOTE, '/studies/%s/split' % study, { |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4182 'Series' : [ t2 ], |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4183 'Replace' : { 'PatientName' : 'Hello' }, |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4184 'Remove' : [ 'ReferringPhysicianName' ], |
181 | 4185 'KeepSource' : False, |
4186 'Asynchronous' : True | |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4187 })) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4188 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4189 self.assertNotEqual(None, job) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4190 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4191 studies = set(DoGet(_REMOTE, '/studies')) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4192 self.assertEqual(2, len(studies)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4193 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4194 series = set(DoGet(_REMOTE, '/series')) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4195 self.assertEqual(2, len(series)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4196 self.assertTrue(t1 in series) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4197 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4198 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4199 self.assertTrue(study in studies) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4200 self.assertTrue(study2 in studies) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4201 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4202 info = DoGet(_REMOTE, '/studies/%s' % study2) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4203 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4204 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4205 |
254
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4206 sopInstanceUids = set() |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4207 for i in DoGet(_REMOTE, '/instances?expand'): |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4208 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4209 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4210 self.assertTrue(knee1Sop in sopInstanceUids) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4211 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4212 # Fails if Orthanc <= 1.5.7 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4213 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4214 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4215 # One original instance is kept, another one is added because of the split |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4216 self.assertEqual(2, len(sopInstanceUids)) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4217 |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4218 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4219 def test_merge(self): |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4220 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
254
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4221 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4222 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4223 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4224 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4225 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4226 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4227 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4228 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4229 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4230 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4231 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4232 job = MonitorJob2(_REMOTE, lambda: DoPost |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4233 (_REMOTE, '/studies/%s/merge' % knee, { |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4234 'Resources' : [ brainix ], |
181 | 4235 'KeepSource' : True, |
4236 'Synchronous' : False | |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4237 })) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4238 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4239 self.assertNotEqual(None, job) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4240 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4241 studies = set(DoGet(_REMOTE, '/studies')) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4242 self.assertEqual(2, len(studies)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4243 self.assertTrue(knee in studies) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4244 self.assertTrue(brainix in studies) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4245 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4246 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4247 self.assertTrue(t1 in series) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4248 series.remove(t1) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4249 self.assertEqual(1, len(series)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4250 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4251 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4252 self.assertEqual(1, len(instances)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4253 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4254 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4255 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4256 self.assertEqual(1, len(instances)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4257 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4258 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4259 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4260 self.assertEqual(1, len(instances)) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4261 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4262 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4263 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4264 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4265 for key in tags['PatientMainDicomTags']: |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4266 self.assertEqual(a[key], merged[key]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4267 if (key in b and key != 'PatientSex'): |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4268 self.assertNotEqual(a[key], b[key]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4269 |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4270 for key in tags['MainDicomTags']: |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4271 # Not in the patient/study module |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4272 if (not key in [ 'InstitutionName', |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4273 'RequestingPhysician', |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4274 'RequestedProcedureDescription', ]): |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4275 self.assertEqual(a[key], merged[key]) |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4276 if (key in b): |
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4277 self.assertNotEqual(a[key], b[key]) |
254
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4278 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4279 sopInstanceUids = set() |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4280 for i in DoGet(_REMOTE, '/instances?expand'): |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4281 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4282 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4283 self.assertTrue(kneeSop in sopInstanceUids) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4284 self.assertTrue(brainixSop in sopInstanceUids) |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4285 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4286 # Fails if Orthanc <= 1.5.7 |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4287 # The 2 original instances are kept, another one is added because of the merge |
05b77ade5e1d
test generation of sopinstanceuid in split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
247
diff
changeset
|
4288 self.assertEqual(3, len(sopInstanceUids)) |
179
8a2dd77d4035
testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
177
diff
changeset
|
4289 |
187 | 4290 |
4291 def test_async_archive(self): | |
4292 # Testing the asynchronous generation of archives/medias (new | |
4293 # in Orthanc 1.4.3) | |
4294 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
4295 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
4296 | |
4297 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
4298 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
4299 | |
4300 job = MonitorJob2(_REMOTE, lambda: DoPost | |
4301 (_REMOTE, '/studies/%s/archive' % kneeT1, { | |
4302 'Synchronous' : False | |
4303 })) | |
4304 | |
4305 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4306 self.assertEqual(1, len(z.namelist())) | |
4307 self.assertFalse('DICOMDIR' in z.namelist()) | |
4308 | |
354
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4309 info = DoGet(_REMOTE, '/jobs/%s' % job) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4310 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4311 self.assertEqual(1, info['Content']['InstancesCount']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4312 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4313 |
187 | 4314 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
4315 (_REMOTE, '/studies/%s/media' % kneeT1, { | |
4316 'Synchronous' : False | |
4317 })) | |
4318 | |
4319 # The archive from the first job has been replaced by the | |
4320 # archive from second job (as MediaArchiveSize == 1) | |
4321 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
4322 | |
4323 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
4324 self.assertEqual(2, len(z.namelist())) | |
4325 self.assertTrue('DICOMDIR' in z.namelist()) | |
4326 | |
354
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4327 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4328 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4329 self.assertEqual(1, info['Content']['InstancesCount']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4330 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4331 |
187 | 4332 job = MonitorJob2(_REMOTE, lambda: DoPost |
4333 (_REMOTE, '/tools/create-archive', { | |
4334 'Synchronous' : False, | |
4335 'Resources' : [ kneeT1, kneeT2 ], | |
4336 })) | |
4337 | |
4338 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4339 self.assertEqual(2, len(z.namelist())) | |
4340 self.assertFalse('DICOMDIR' in z.namelist()) | |
4341 | |
354
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4342 info = DoGet(_REMOTE, '/jobs/%s' % job) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4343 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4344 self.assertEqual(2, info['Content']['InstancesCount']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4345 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4346 |
187 | 4347 job = MonitorJob2(_REMOTE, lambda: DoPost |
4348 (_REMOTE, '/tools/create-media', { | |
4349 'Synchronous' : False, | |
4350 'Resources' : [ kneeT1, kneeT2 ], | |
4351 })) | |
4352 | |
4353 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
4354 self.assertEqual(3, len(z.namelist())) | |
4355 self.assertTrue('DICOMDIR' in z.namelist()) | |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4356 |
354
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4357 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4358 self.assertEqual(2, info['Content']['InstancesCount']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4359 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
88f076b906ca
test ArchiveSizeMB in archive jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
353
diff
changeset
|
4360 |
187 | 4361 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4362 def test_queries_hierarchy(self): |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4363 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4364 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4365 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4366 tags = { |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4367 'NumberOfPatientRelatedInstances' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4368 'NumberOfPatientRelatedSeries' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4369 'NumberOfPatientRelatedStudies' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4370 'NumberOfStudyRelatedInstances' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4371 'NumberOfStudyRelatedSeries' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4372 'NumberOfSeriesRelatedInstances' : '', |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4373 } |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4374 |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4375 tags2 = copy.copy(tags) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4376 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4377 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4378 patient = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4379 'Level' : 'Patient', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4380 'Query' : tags2 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4381 }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4382 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4383 study = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4384 'Level' : 'Study', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4385 'Query' : tags2 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4386 }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4387 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4388 series = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4389 'Level' : 'Series', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4390 'Query' : tags2 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4391 }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4392 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4393 instance = DoPost(_REMOTE, '/modalities/self/query', { |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4394 'Level' : 'Instance', |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4395 'Query' : tags2 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4396 }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4397 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4398 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4399 self.assertEqual(1, len(p)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4400 self.assertEqual('887', p[0]['PatientID']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4401 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4402 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4403 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4404 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4405 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4406 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4407 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4408 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4409 self.assertEqual(1, len(p)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4410 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4411 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4412 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4413 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4414 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4415 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4416 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4417 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4418 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4419 self.assertEqual(1, len(p)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4420 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4421 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4422 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4423 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4424 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4425 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4426 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4427 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4428 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4429 self.assertEqual(1, len(p)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4430 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4431 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4432 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4433 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4434 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4435 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4436 |
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4437 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4438 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4439 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4440 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4441 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4442 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4443 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4444 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4445 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4446 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4447 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4448 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4449 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4450 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4451 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4452 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4453 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4454 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4455 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4456 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4457 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4458 { 'Query' : tags }) ['ID'] |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4459 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4460 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4461 |
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
4462 |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4463 def test_dicom_disk_size(self): |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4464 dicomSize = 0 |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4465 |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4466 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4467 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4468 |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4469 for i in range(2): |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4470 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4471 UploadInstance(_REMOTE, p) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4472 dicomSize += os.path.getsize(GetDatabasePath(p)) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4473 |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4474 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4475 self.assertEqual(2, s['CountInstances']) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4476 self.assertEqual(2, s['CountSeries']) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4477 self.assertEqual(1, s['CountStudies']) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4478 |
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4479 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
4480 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4481 |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4482 if isCompressed: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4483 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4484 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4485 else: |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4486 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4487 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
4488 |
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4489 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4490 def test_changes_2(self): |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4491 # More consistent behavior since Orthanc 1.5.2 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4492 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4493 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4494 # Make sure that this is not the first change |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4495 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4496 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4497 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4498 DoDelete(_REMOTE, '/instances/%s' % a) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4499 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4500 # No more instance, but there were previous changes |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4501 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4502 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4503 c = DoGet(_REMOTE, '/changes') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4504 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4505 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4506 seq = c['Last'] |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4507 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4508 c = DoGet(_REMOTE, '/changes?last') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4509 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4510 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4511 self.assertEqual(seq, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4512 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4513 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4514 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4515 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4516 self.assertEqual(seq, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4517 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4518 # Add one instance |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4519 UploadInstance(_REMOTE, 'DummyCT.dcm') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4520 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4521 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4522 c = DoGet(_REMOTE, '/changes') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4523 self.assertEqual(4, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4524 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4525 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4526 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4527 c = DoGet(_REMOTE, '/changes?last') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4528 self.assertEqual(1, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4529 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4530 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4531 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4532 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4533 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4534 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4535 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4536 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4537 # Remove the uploaded instance |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4538 DoDelete(_REMOTE, '/instances/%s' % a) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4539 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4540 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4541 c = DoGet(_REMOTE, '/changes') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4542 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4543 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4544 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4545 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4546 c = DoGet(_REMOTE, '/changes?last') |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4547 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4548 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4549 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4550 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4551 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4552 self.assertEqual(0, len(c['Changes'])) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4553 self.assertTrue(c['Done']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4554 self.assertEqual(seq + 4, c['Last']) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4555 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4556 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4557 def test_bitbucket_issue_124(self): |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4558 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4559 |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4560 z = GetArchive(_REMOTE, '/patients/%s/media' % a) |
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
4561 self.assertEqual(2, len(z.namelist())) |
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4562 |
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4563 |
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4564 def test_invalid_findscp(self): |
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4565 UploadInstance(_REMOTE, 'DummyCT.dcm') |
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4566 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
4567 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4568 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4569 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4570 def test_bitbucket_issue_90(self): |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4571 def CountDicomResults(sex): |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4572 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4573 return len(re.findall('\(0010,0040\)', a)) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4574 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4575 def CountRestResults(sex): |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4576 a = DoPost(_REMOTE, '/tools/find', |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4577 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4578 return len(a) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4579 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4580 # Just like the "CR000000.dcm" of the issue, the test image |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4581 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4582 UploadInstance(_REMOTE, 'DummyCT.dcm') |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4583 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4584 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4585 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4586 # In wildcard constraints, the patient sex must be set for a match to occur |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4587 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4588 self.assertEqual(0, CountRestResults('*')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4589 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4590 # In single-valued constraints, the patient sex must be set |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4591 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4592 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4593 self.assertEqual(0, CountRestResults('F')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4594 self.assertEqual(0, CountRestResults('M')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4595 |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4596 # Empty constraints are only used to ask the actual value of |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4597 # the tag to be added to the *answer*. The tag should not used |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4598 # as a filter in such a situation. |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4599 self.assertEqual(1, CountDicomResults('PatientSex')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4600 self.assertEqual(1, CountDicomResults('PatientSex=')) |
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
4601 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
210
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4602 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4603 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4604 def test_rest_modalities_in_study(self): |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4605 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4606 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4607 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4608 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4609 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4610 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4611 self.assertEqual(0, len(a)) |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4612 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4613 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4614 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4615 self.assertEqual(1, len(a)) |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4616 |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4617 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4618 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
2c50c8f340c2
test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
208
diff
changeset
|
4619 self.assertEqual(1, len(a)) |
211 | 4620 |
4621 | |
4622 def test_series_status(self): | |
4623 def HasCompletedInChanges(): | |
4624 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
4625 if c['ChangeType'] == 'CompletedSeries': | |
4626 return True; | |
4627 | |
4628 return False | |
4629 | |
4630 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
4631 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
4632 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
4633 self.assertFalse(HasCompletedInChanges()) | |
4634 | |
4635 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
4636 | |
4637 for i in range(3): | |
4638 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
4639 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
4640 self.assertFalse(HasCompletedInChanges()) | |
4641 | |
4642 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
4643 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
4644 self.assertTrue(HasCompletedInChanges()) | |
4645 | |
4646 DoDelete(_REMOTE, '/changes') | |
4647 self.assertFalse(HasCompletedInChanges()) | |
4648 | |
4649 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
4650 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
4651 self.assertFalse(HasCompletedInChanges()) | |
4652 | |
215 | 4653 |
4654 def test_dicomweb(self): | |
4655 def Compare(dicom, reference): | |
4656 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
4657 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
4658 headers = { 'Accept' : 'application/dicom+json' }) | |
4659 with open(GetDatabasePath(reference), 'rb') as c: | |
4660 d = json.load(c) | |
220 | 4661 AssertAlmostEqualRecursive(self, d, b) |
215 | 4662 |
4663 Compare('DummyCT.dcm', 'DummyCT.json') | |
4664 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
4665 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
4666 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
217 | 4667 |
4668 | |
4669 def test_issue_95_encodings(self): | |
319 | 4670 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
217 | 4671 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
4672 | |
4673 # Very useful tool: "file2" from package "file-kanji" | |
4674 | |
4675 def GetPatientName(dicom): | |
4676 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
4677 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
4678 return j['PatientName'] | |
4679 | |
4680 def ComparePatientName(name, dicom): | |
4681 self.assertEqual(name, GetPatientName(dicom)) | |
4682 | |
4683 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
4684 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
4685 | |
4686 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
4687 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
4688 | |
4689 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
4690 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
4691 | |
4692 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
4693 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
4694 | |
4695 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
4696 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
4697 | |
4698 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
4699 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
4700 | |
4701 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
4702 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
4703 | |
4704 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
4705 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
4706 | |
4707 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
4708 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
4709 # Linux console into Emacs automatically reverse the string | |
4710 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
4711 | |
4712 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
4713 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
4714 # characters by default, but copy/paste works with Emacs | |
4715 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
4716 | |
4717 # SCSH32: This SpecificCharacterSet is composed of 2 | |
4718 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
4719 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
4720 # remainer. Orthanc only takes into consideration the first | |
4721 # codepage: This is a limitation. | |
4722 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
4723 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ヤマダ^タロウ=')) | |
218
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4724 |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4725 |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4726 def test_findscu_missing_tags(self): |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4727 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4728 UploadInstance(_REMOTE, 'DummyCT.dcm') |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4729 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4730 |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4731 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ]) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4732 |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4733 # We have 2 instances... |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4734 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4735 self.assertEqual(2, len(patientNames)) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4736 self.assertEqual('KNIX', patientNames[0]) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4737 self.assertEqual('KNIX', patientNames[1]) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4738 |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4739 # ...but only 1 value for the "Rows" tag |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4740 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4741 self.assertEqual(1, len(rows)) |
70fba41776be
test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
217
diff
changeset
|
4742 self.assertEqual('512', rows[0]) |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4743 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4744 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4745 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4746 def test_bitbucket_issue_131(self): |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4747 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4748 # StudyInstanceUID in it's database." |
319 | 4749 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4750 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4751 # Insert 2 instances, with the same StudyInstanceUID, but with |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4752 # different patient IDs. Orthanc will create 2 distincts |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4753 # patients, and the hierarchy of resources above the two |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4754 # instances will be fully disjoint. |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4755 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4756 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4757 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4758 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4759 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4760 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4761 a = DoPost(_REMOTE, '/modalities/self/query', { |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4762 'Level' : 'Study', |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4763 'Query' : {"PatientID": "A" }})['ID'] |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4764 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4765 # 1 study is matched |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4766 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4767 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4768 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 4769 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
4770 (_REMOTE, '/queries/%s/retrieve' % a, | |
4771 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4772 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4773 # The two studies are matched, as we made the request at the |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4774 # Study level, thus the shared StudyInstanceUID is used as the key |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4775 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4776 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4777 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4778 # Match the 2 studies |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4779 a = DoPost(_REMOTE, '/modalities/self/query', { |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4780 'Level' : 'Study', |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4781 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4782 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4783 DropOrthanc(_LOCAL) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4784 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 4785 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
4786 (_REMOTE, '/queries/%s/retrieve' % a, | |
4787 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4788 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4789 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4790 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4791 # Same test, at the patient level => only 1 instance is transfered |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4792 a = DoPost(_REMOTE, '/modalities/self/query', { |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4793 'Level' : 'Patient', |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4794 'Query' : {"PatientID": "A" }})['ID'] |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4795 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4796 DropOrthanc(_LOCAL) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4797 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 4798 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
4799 (_REMOTE, '/queries/%s/retrieve' % a, | |
4800 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4801 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4802 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4803 |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4804 # Same test, at the series level => only 1 instance is transfered |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4805 a = DoPost(_REMOTE, '/modalities/self/query', { |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4806 'Level' : 'Series', |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4807 'Query' : {"PatientID": "A" }})['ID'] |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4808 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4809 DropOrthanc(_LOCAL) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4810 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
220 | 4811 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
4812 (_REMOTE, '/queries/%s/retrieve' % a, | |
4813 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4814 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
4815 |
233
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4816 |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4817 def test_bitbucket_issue_136(self): |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4818 UploadInstance(_REMOTE, 'Issue137.dcm') |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4819 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4820 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4821 self.assertEqual(1, len(patientNames)) |
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
4822 self.assertEqual('John Doe', patientNames[0]) |
234
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4823 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4824 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4825 def test_anonymize_relationships_4(self): |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4826 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4827 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4828 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4829 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4830 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4831 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4832 'application/json')['ID'] |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4833 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4834 self.assertEqual(2, len(series)) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4835 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4836 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4837 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4838 self.assertEqual(1, len(cr)) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4839 self.assertEqual(1, len(pr)) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4840 self.assertEqual(1, len(cr[0]['Instances'])) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4841 self.assertEqual(1, len(pr[0]['Instances'])) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4842 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4843 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4844 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4845 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4846 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4847 crinstance['MainDicomTags']['SOPInstanceUID']) |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4848 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4849 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4850 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4851 # This fails on Orthanc <= 1.5.6 |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4852 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
4853 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4854 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4855 |
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4856 def test_anonymize_relationships_5(self): |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4857 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4858 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4859 oStudyId = ct1['ParentStudy'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4860 oCtInstanceId = ct1['ID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4861 oRtInstanceId = rt1['ID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4862 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4863 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4864 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4865 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4866 # first validate the relationships in the source data |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4867 oStudyUID = oCtTags['StudyInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4868 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4869 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4870 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4871 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4872 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4873 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4874 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4875 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4876 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4877 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4878 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4879 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4880 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4881 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4882 ### anonymize |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4883 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4884 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4885 'application/json')['ID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4886 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4887 ### validate |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4888 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4889 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4890 self.assertEqual(2, len(aSeries)) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4891 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4892 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4893 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4894 aCtInstanceId = aCt[0]['Instances'][0] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4895 aRtInstanceId = aRt[0]['Instances'][0] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4896 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4897 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4898 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4899 # now validate the relationships in the anonymized data |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4900 aStudyUID = aCtTags['StudyInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4901 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4902 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4903 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4904 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4905 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4906 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4907 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4908 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4909 # make sure all UIDs have been updated |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4910 self.assertNotEqual(oStudyUID, aStudyUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4911 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4912 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4913 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4914 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4915 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4916 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4917 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4918 # validate the relationships |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4919 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4920 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
256 | 4921 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
4922 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4923 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4924 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4925 |
256 | 4926 def test_anonymize_relationships_5b(self): |
4927 # same test as previous one but, this time, we force the StudyInstanceUID | |
4928 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
4929 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
4930 oStudyId = ct1['ParentStudy'] | |
4931 oCtInstanceId = ct1['ID'] | |
4932 oRtInstanceId = rt1['ID'] | |
4933 | |
4934 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
4935 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
4936 | |
4937 ### anonymize while forcing the StudyInstanceUID | |
4938 | |
4939 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
4940 'application/json')['ID'] | |
4941 | |
4942 ### validate | |
4943 | |
4944 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
4945 self.assertEqual(2, len(aSeries)) | |
4946 | |
4947 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
4948 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
4949 aCtInstanceId = aCt[0]['Instances'][0] | |
4950 aRtInstanceId = aRt[0]['Instances'][0] | |
4951 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
4952 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
4953 | |
4954 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
4955 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
4956 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4957 |
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
4958 |
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4959 def test_bitbucket_issue_140(self): |
266 | 4960 # "Modifying private tags with REST API changes VR from LO to |
267 | 4961 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
319 | 4962 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4963 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4964 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4965 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4966 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
266 | 4967 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
4968 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4969 }, 'application/json') ['ID'] |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4970 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4971 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4972 self.assertEqual(1, len(instances)) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4973 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4974 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4975 t = tags['4321,1012'] |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4976 self.assertEqual('String', t['Type']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4977 self.assertEqual('RadioButton3', t['Name']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4978 self.assertEqual('RadioLogic', t['PrivateCreator']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4979 self.assertEqual('jklmopq', t['Value']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4980 |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4981 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4982 t = tags['4321,1012'] |
327 | 4983 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4984 self.assertEqual('RadioButton3', t['Name']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4985 self.assertEqual('RadioLogic', t['PrivateCreator']) |
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
4986 self.assertEqual('aaabbbccc', t['Value']) |
236
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4987 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4988 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4989 def test_find_normalize(self): |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4990 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4991 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4992 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4993 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4994 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4995 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4996 'Query' : { 'Rows' : '42' } |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4997 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4998 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
4999 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5000 self.assertEqual(1, len(b)) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5001 self.assertFalse('Rows' in b[0]) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5002 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5003 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5004 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5005 'Query' : { 'Rows' : '42' }, |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5006 'Normalize' : False |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5007 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5008 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5009 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5010 self.assertEqual(0, len(b)) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5011 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5012 a = DoPost(_REMOTE, '/modalities/self/query', { |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5013 'Level' : 'Instance', |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5014 'Query' : { 'Rows' : '512' }, |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5015 'Normalize' : False |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5016 }) ['ID'] |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5017 |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5018 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5019 self.assertEqual(1, len(b)) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5020 self.assertTrue('Rows' in b[0]) |
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5021 self.assertEqual('512', b[0]['Rows']) |
237 | 5022 |
5023 a = DoPost(_REMOTE, '/modalities/self/query', { | |
5024 'Level' : 'Instance', | |
5025 'Query' : { 'Rows' : '' }, | |
5026 'Normalize' : False | |
5027 }) ['ID'] | |
5028 | |
5029 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
5030 self.assertEqual(1, len(b)) | |
5031 self.assertTrue('Rows' in b[0]) | |
5032 self.assertEqual('512', b[0]['Rows']) | |
5033 | |
5034 self.assertRaises(Exception, lambda: DoPost( | |
5035 _REMOTE, '/modalities/self/query', { | |
5036 'Level' : 'Instance', | |
5037 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
5038 'Normalize' : False | |
5039 })) | |
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5040 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5041 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5042 def test_bitbucket_issue_141(self): |
319 | 5043 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5044 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5045 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5046 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5047 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5048 pdf = f.read() |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5049 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5050 b = DoPost(_REMOTE, '/tools/create-dicom', { |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5051 'Parent' : study, |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5052 'Tags' : {}, |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5053 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5054 }) ['ID'] |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5055 |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5056 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5057 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5058 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5059 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5060 |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5061 |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5062 def test_modifying_missing_patientid(self): |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5063 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5064 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5065 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
262 | 5066 |
5067 | |
5068 def test_log_level(self): | |
319 | 5069 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
262 | 5070 original = DoGet(_REMOTE, '/tools/log-level') |
5071 | |
5072 DoPut(_REMOTE, '/tools/log-level', 'default') | |
5073 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
5074 DoGet(_REMOTE, '/system') | |
5075 | |
5076 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
5077 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
5078 DoGet(_REMOTE, '/system') | |
5079 | |
5080 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
5081 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
5082 DoGet(_REMOTE, '/system') | |
5083 | |
5084 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
5085 | |
5086 # Switch back to the original log level | |
5087 DoPut(_REMOTE, '/tools/log-level', original) | |
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5088 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5089 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5090 def test_upload_compressed(self): |
265 | 5091 # New in Orthanc 1.6.0 |
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5092 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5093 d = f.read() |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5094 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5095 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5096 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5097 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5098 headers = { 'Content-Encoding' : 'nope' })) |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5099 |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5100 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5101 headers = { 'Content-Encoding' : 'gzip' }) |
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5102 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
262 | 5103 |
5104 | |
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5105 def test_study_series_find_inconsistency(self): |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5106 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5107 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5108 def CountAnswers(query): |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5109 a = DoPost(_REMOTE, 'modalities/self/query', query) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5110 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5111 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5112 # This instance has "SeriesDescription" (0008,103e) tag, but no |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5113 # "ProtocolName" (0018,1030). Both of those tags are part of |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5114 # the "main DICOM tags" of Orthanc. |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5115 UploadInstance(_REMOTE, 'Issue137.dcm') |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5116 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5117 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5118 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5119 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5120 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5121 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5122 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5123 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5124 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5125 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5126 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5127 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5128 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5129 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5130 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5131 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5132 # At the study level, the "SeriesDescription" tag is not allowed, but |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5133 # is wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5134 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5135 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5136 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5137 'SeriesDescription' : 'NOPE' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5138 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5139 'Normalize' : False |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5140 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5141 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5142 # This test fails on Orthanc <= 1.5.8 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5143 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5144 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5145 'SeriesDescription' : '*' # Wildcard matching => no match, as the tag is absent |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5146 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5147 'Normalize' : False |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5148 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5149 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5150 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5151 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5152 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5153 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5154 'Normalize' : True |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5155 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5156 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5157 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5158 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5159 'SeriesDescription' : '*' # Matches, as wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5160 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5161 'Normalize' : True |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5162 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5163 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5164 for normalize in [ True, False ]: |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5165 # At the series level, the "SeriesDescription" tag is allowed, and |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5166 # normalization has no effect |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5167 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5168 # "Universal matching" will match all entities, including |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5169 # those with the missing tag |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5170 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5171 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5172 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5173 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5174 'SeriesDescription' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5175 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5176 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5177 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5178 # "Universal matching" will match all entities, including |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5179 # those with the missing tag |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5180 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5181 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5182 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5183 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5184 'SeriesDescription' : '*' # Wildcard matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5185 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5186 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5187 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5188 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5189 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5190 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5191 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5192 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5193 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5194 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5195 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5196 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5197 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5198 'SeriesDescription' : '*MISMATCHED^VALUE*' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5199 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5200 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5201 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5202 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5203 # Universal matching matches any instance, even if the |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5204 # query is at the study-level, and thus if "SeriesDescription" |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5205 # makes no sense |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5206 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5207 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5208 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5209 'SeriesDescription' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5210 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5211 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5212 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5213 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5214 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5215 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5216 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5217 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5218 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5219 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5220 # At the study level, the "ProtocolName" tag is not allowed, but |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5221 # is wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5222 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5223 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5224 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5225 'ProtocolName' : 'NOPE' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5226 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5227 'Normalize' : False |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5228 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5229 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5230 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5231 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5232 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5233 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5234 'Normalize' : False |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5235 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5236 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5237 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5238 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5239 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5240 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5241 'Normalize' : True |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5242 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5243 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5244 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5245 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5246 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5247 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5248 'Normalize' : True |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5249 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5250 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5251 for normalize in [ True, False ]: |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5252 # At the series level, the "ProtocolName" tag is allowed, and |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5253 # normalization has no effect |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5254 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5255 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5256 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5257 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5258 'ProtocolName' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5259 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5260 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5261 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5262 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5263 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5264 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5265 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5266 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5267 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5268 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5269 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5270 'Level' : 'Series', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5271 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5272 'ProtocolName' : '*MISMATCHED^VALUE*' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5273 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5274 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5275 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5276 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5277 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5278 'Level' : 'Study', |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5279 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5280 'ProtocolName' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5281 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5282 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5283 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5284 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5285 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5286 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5287 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5288 ## |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5289 |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5290 for level in [ 'Study', 'Series' ] : |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5291 for normalize in [ True, False ]: |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5292 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5293 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5294 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5295 'StudyInstanceUID' : '' # Universal matching |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5296 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5297 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5298 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5299 self.assertEqual(0, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5300 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5301 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5302 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5303 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5304 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5305 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5306 self.assertEqual(1, CountAnswers({ |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5307 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5308 'Query' : { |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5309 'StudyInstanceUID' : '4.5.6' # This is the actual value |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5310 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5311 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5312 })) |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5313 |
269 | 5314 # Wildcard matching is not allowed for this VR |
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5315 # This test fails on Orthanc <= 1.5.8 |
269 | 5316 self.assertRaises(Exception, lambda: CountAnswers({ |
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5317 'Level' : level, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5318 'Query' : { |
269 | 5319 'StudyInstanceUID' : '*' |
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5320 }, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5321 'Normalize' : normalize, |
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5322 })) |
265 | 5323 |
5324 | |
5325 def test_rendered(self): | |
5326 # New in Orthanc 1.6.0 | |
5327 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
5328 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5329 self.assertEqual("RGB", im.mode) | |
5330 self.assertEqual(41, im.size[0]) | |
5331 self.assertEqual(41, im.size[1]) | |
5332 | |
5333 # http://effbot.org/zone/pil-comparing-images.htm | |
5334 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
5335 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
5336 | |
5337 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
5338 self.assertEqual("RGB", im.mode) | |
5339 self.assertEqual(10, im.size[0]) | |
5340 self.assertEqual(10, im.size[1]) | |
5341 | |
5342 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
5343 self.assertEqual("RGB", im.mode) | |
5344 self.assertEqual(10, im.size[0]) | |
5345 self.assertEqual(10, im.size[1]) | |
5346 | |
5347 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
5348 self.assertEqual("RGB", im.mode) | |
5349 self.assertEqual(128, im.size[0]) | |
5350 self.assertEqual(128, im.size[1]) | |
5351 | |
5352 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
5353 self.assertEqual("RGB", im.mode) | |
5354 self.assertEqual(10, im.size[0]) | |
5355 self.assertEqual(10, im.size[1]) | |
5356 | |
5357 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
5358 self.assertEqual("RGB", im.mode) | |
5359 self.assertEqual(10, im.size[0]) | |
5360 self.assertEqual(10, im.size[1]) | |
5361 | |
5362 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
5363 self.assertEqual("RGB", im.mode) | |
5364 self.assertEqual(5, im.size[0]) | |
5365 self.assertEqual(5, im.size[1]) | |
5366 | |
5367 | |
5368 # Grayscale image | |
5369 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
5370 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5371 self.assertEqual("L", im.mode) | |
5372 self.assertEqual(288, im.size[0]) | |
5373 self.assertEqual(288, im.size[1]) | |
5374 self.assertEqual(0, im.getpixel((0, 0))) | |
5375 | |
5376 # Those are the original windowing parameters that are written | |
5377 # inside the DICOM file | |
5378 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
5379 self.assertEqual("L", im2.mode) | |
5380 self.assertEqual(288, im2.size[0]) | |
5381 self.assertEqual(288, im2.size[1]) | |
5382 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
5383 | |
5384 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
5385 self.assertEqual("L", im.mode) | |
5386 self.assertEqual(512, im.size[0]) | |
5387 self.assertEqual(512, im.size[1]) | |
5388 | |
5389 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
5390 self.assertEqual("L", im.mode) | |
5391 self.assertEqual(10, im.size[0]) | |
5392 self.assertEqual(10, im.size[1]) | |
5393 | |
5394 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
5395 self.assertEqual("L", im.mode) | |
5396 self.assertEqual(10, im.size[0]) | |
5397 self.assertEqual(10, im.size[1]) | |
5398 | |
5399 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
5400 self.assertEqual("L", im.mode) | |
5401 self.assertEqual(1, im.size[0]) | |
5402 self.assertEqual(1, im.size[1]) | |
5403 self.assertEqual(255, im.getpixel((0, 0))) | |
5404 | |
5405 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
5406 self.assertEqual("L", im.mode) | |
5407 self.assertEqual(1, im.size[0]) | |
5408 self.assertEqual(1, im.size[1]) | |
5409 self.assertEqual(0, im.getpixel((0, 0))) | |
5410 | |
5411 | |
5412 # Test monochrome 1 | |
5413 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
5414 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
5415 self.assertEqual("L", im.mode) | |
5416 self.assertEqual(2010, im.size[0]) | |
5417 self.assertEqual(2446, im.size[1]) | |
5418 self.assertEqual(0, im.getpixel((0, 0))) | |
5419 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
5420 self.assertEqual("L", im.mode) | |
5421 self.assertEqual(20, im.size[0]) | |
5422 self.assertEqual(24, im.size[1]) | |
5423 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
5424 self.assertEqual("L", im.mode) | |
5425 self.assertEqual(20, im.size[0]) | |
5426 self.assertEqual(24, im.size[1]) | |
5427 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
5428 self.assertEqual("L", im.mode) | |
5429 self.assertEqual(10, im.size[0]) | |
5430 self.assertEqual(12, im.size[1]) | |
5431 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
5432 self.assertEqual("L", im.mode) | |
5433 self.assertEqual(20, im.size[0]) | |
5434 self.assertEqual(24, im.size[1]) | |
268
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5435 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5436 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5437 def test_bitbucket_issue_154(self): |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5438 # "Matching against list of UID-s by C-MOVE" |
319 | 5439 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
268
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5440 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5441 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5442 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5443 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5444 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5445 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5446 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5447 # C-FIND is working on list of UIDs |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5448 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5449 '-k', 'StudyInstanceUID=%s' % study, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5450 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5451 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5452 self.assertEqual(2, len(series)) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5453 self.assertTrue(series1 in series) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5454 self.assertTrue(series2 in series) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5455 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5456 # Individual retrieval is working in Orthanc < 1.6.0 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5457 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5458 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5459 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5460 '-k', 'StudyInstanceUID=%s' % study, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5461 '-k', 'SeriesInstanceUID=%s' % series1, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5462 ]))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5463 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5464 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5465 '-k', 'StudyInstanceUID=%s' % study, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5466 '-k', 'SeriesInstanceUID=%s' % series2, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5467 ]))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5468 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5469 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5470 DropOrthanc(_LOCAL) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5471 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5472 # But list matching is working only in Orthanc >= 1.6.0 |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5473 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5474 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5475 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5476 '-k', 'StudyInstanceUID=%s' % study, |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5477 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5478 ]))) |
c8d79d8258cd
test_bitbucket_issue_154
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
267
diff
changeset
|
5479 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5480 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5481 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5482 def test_storage_commitment_api(self): |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5483 # Storage commitment is available since Orthanc 1.6.0 |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5484 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5485 def WaitTransaction(uid): |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5486 while True: |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5487 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5488 if s['Status'] != 'Pending': |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5489 return s |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5490 else: |
342
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
5491 time.sleep(0.01) |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5492 |
281 | 5493 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5494 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5495 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5496 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5497 # Against self |
281 | 5498 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5499 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
5500 }) ['ID'] | |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5501 self.assertTrue(transaction.startswith('2.25.')) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5502 |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5503 result = WaitTransaction(transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5504 self.assertEqual('ORTHANC', result['RemoteAET']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5505 self.assertEqual('Success', result['Status']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5506 self.assertEqual(1, len(result['Success'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5507 self.assertEqual(0, len(result['Failures'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5508 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5509 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5510 |
281 | 5511 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5512 "DicomInstances" : [ | |
5513 { 'SOPClassUID' : sopClassUid, | |
5514 'SOPInstanceUID' : sopInstanceUid }, | |
5515 ], | |
5516 }) | |
5517 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
5518 self.assertEqual(result, WaitTransaction(transaction)) | |
5519 | |
5520 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
5521 "Resources" : [ | |
5522 instance['ID'], | |
5523 instance['ParentSeries'], | |
5524 instance['ParentStudy'], | |
5525 instance['ParentPatient'], | |
5526 ] | |
5527 }) | |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5528 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5529 self.assertEqual(result, WaitTransaction(transaction)) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5530 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5531 |
281 | 5532 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
5533 "DicomInstances" : [ | |
5534 [ 'nope', 'nope2' ], | |
5535 [ sopClassUid, sopInstanceUid ], | |
5536 ], | |
5537 }) ['ID'] | |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5538 self.assertTrue(transaction.startswith('2.25.')) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5539 |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5540 result = WaitTransaction(transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5541 self.assertEqual('ORTHANC', result['RemoteAET']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5542 self.assertEqual('Failure', result['Status']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5543 self.assertEqual(1, len(result['Success'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5544 self.assertEqual(1, len(result['Failures'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5545 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5546 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5547 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5548 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5549 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5550 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5551 # Cannot remove items from a failed storage commitment transaction |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5552 self.assertRaises(Exception, lambda: |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5553 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5554 |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5555 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5556 # Against Orthanc 0.8.6, that does not support storage commitment |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5557 self.assertRaises(Exception, lambda: |
281 | 5558 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
5559 "DicomInstances" : [ | |
5560 [ sopClassUid, sopInstanceUid ], | |
5561 ] | |
5562 })) | |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5563 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5564 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5565 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5566 def test_storage_commitment_store(self): |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5567 # Storage commitment is available since Orthanc 1.6.0 |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5568 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5569 def WaitTransaction(uid): |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5570 while True: |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5571 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5572 if s['Status'] != 'Pending': |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5573 return s |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5574 else: |
342
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
5575 time.sleep(0.01) |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5576 |
279
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5577 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5578 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5579 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5580 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5581 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5582 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5583 'Resources' : [ i ], |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5584 'StorageCommitment' : True, |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5585 })) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5586 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5587 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5588 'Resources' : [ i ], |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5589 'StorageCommitment' : False, |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5590 }) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5591 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5592 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5593 j = DoPost(_REMOTE, '/modalities/self/store', { |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5594 'Resources' : [ i ], |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5595 'StorageCommitment' : True, |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5596 }) |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5597 |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5598 transaction = j['StorageCommitmentTransactionUID'] |
31e1e49df380
starting tests for storage commitment
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
5599 self.assertTrue(transaction.startswith('2.25.')) |
280
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5600 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5601 result = WaitTransaction(transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5602 self.assertEqual('ORTHANC', result['RemoteAET']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5603 self.assertEqual('Success', result['Status']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5604 self.assertEqual(1, len(result['Success'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5605 self.assertEqual(0, len(result['Failures'])) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5606 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5607 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5608 result['Success'][0]['SOPInstanceUID']) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5609 |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5610 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5611 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
5daa3896981c
testing storage commitment reports
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
279
diff
changeset
|
5612 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
285
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5613 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5614 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5615 def test_store_straight(self): # New in Orthanc 1.6.1 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5616 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5617 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5618 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5619 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5620 dicom = f.read() |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5621 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5622 self.assertRaises(Exception, lambda: DoPost( |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5623 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5624 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5625 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5626 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5627 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5628 answer['SOPClassUID']) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5629 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5630 answer['SOPInstanceUID']) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5631 |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5632 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
5633 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5634 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5635 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5636 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5637 # Add a RLE-encoded DICOM file |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5638 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5639 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5640 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5641 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5642 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5643 # Export the instance, with transcoding: "_REMOTE" is the |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5644 # Orthanc server being tested |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5645 try: |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5646 DoDelete(_REMOTE, '/modalities/toto') |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5647 except: |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5648 pass |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5649 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5650 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5651 DoPut(_REMOTE, '/modalities/toto', params) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5652 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5653 j = DoGet(_LOCAL, '/instances') |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5654 self.assertEqual(1, len(j)) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5655 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5656 self.assertTrue(uncompressedSize > rleSize / 2) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5657 |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5658 # Export, with transcoding disabled => this fails |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5659 params['AllowTranscoding'] = False |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5660 DoPut(_REMOTE, '/modalities/toto', params) |
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
5661 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
5662 DoDelete(_REMOTE, '/modalities/toto') |
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5663 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5664 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5665 def test_bitbucket_issue_169(self): |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5666 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5667 dicom = bz2.decompress(f.read()) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5668 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5669 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5670 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5671 self.assertEqual(44350560, len(dicom)) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5672 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5673 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5674 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5675 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5676 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5677 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5678 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5679 j = DoGet(_LOCAL, '/instances') |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5680 self.assertEqual(1, len(j)) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5681 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5682 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5683 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5684 # Little Endian" (1.2.840.10008.1.2) |
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5685 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5686 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5687 |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5688 # In Orthanc <= 1.6.1, the value of the private tags was lost |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5689 # because of this transcoding |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5690 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
289
diff
changeset
|
5691 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5692 |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5693 |
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5694 def test_modify_transcode_instance(self): |
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5695 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5696 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5697 DoGet(_REMOTE, '/instances/%s/file' % i))) |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5698 |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5699 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5700 self.assertTrue(len(a) > 20) |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5701 |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5702 SYNTAXES = [ |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5703 '1.2.840.10008.1.2', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5704 '1.2.840.10008.1.2.1', |
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
299
diff
changeset
|
5705 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5706 '1.2.840.10008.1.2.2', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5707 '1.2.840.10008.1.2.4.50', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5708 '1.2.840.10008.1.2.4.51', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5709 '1.2.840.10008.1.2.4.57', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5710 '1.2.840.10008.1.2.4.70', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5711 ] |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5712 |
304 | 5713 if HasGdcmPlugin(_REMOTE): |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5714 SYNTAXES = SYNTAXES + [ |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5715 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5716 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5717 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5718 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5719 ] |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5720 |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5721 for syntax in SYNTAXES: |
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5722 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5723 'Transcode' : syntax, |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5724 'Keep' : [ 'SOPInstanceUID' ], |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5725 'Force' : True, |
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5726 }) |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5727 |
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
5728 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5729 |
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5730 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5731 self.assertTrue(len(b) > 20) |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5732 if syntax in [ '1.2.840.10008.1.2.4.50', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5733 '1.2.840.10008.1.2.4.51', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5734 '1.2.840.10008.1.2.4.81', |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5735 '1.2.840.10008.1.2.4.91' ]: |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5736 # Lossy transcoding: The SOP instance UID must have changed |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5737 self.assertNotEqual(a, b) |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5738 else: |
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
5739 self.assertEqual(a, b) |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5740 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5741 def test_archive_transcode(self): |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5742 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5743 |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5744 # GET on "/media" |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5745 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5746 self.assertEqual(2, len(z.namelist())) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5747 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5748 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5749 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5750 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5751 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5752 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5753 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5754 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5755 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5756 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5757 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5758 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5759 |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5760 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5761 # POST on "/media" |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5762 self.assertRaises(Exception, lambda: PostArchive( |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5763 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5764 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5765 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5766 'Transcode' : '1.2.840.10008.1.2.4.50', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5767 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5768 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5769 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5770 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5771 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5772 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5773 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5774 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5775 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5776 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5777 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5778 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5779 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5780 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5781 # GET on "/archive" |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5782 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5783 self.assertEqual(1, len(z.namelist())) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5784 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5785 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5786 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5787 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5788 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5789 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5790 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5791 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5792 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5793 |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5794 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5795 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5796 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5797 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5798 # POST on "/archive" |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5799 self.assertRaises(Exception, lambda: PostArchive( |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5800 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5801 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5802 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5803 'Transcode' : '1.2.840.10008.1.2.4.50', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5804 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5805 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5806 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5807 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5808 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5809 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5810 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5811 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5812 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5813 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5814 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5815 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
5816 |
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5817 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5818 # "/tools/create-*" |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5819 z = PostArchive(_REMOTE, '/tools/create-archive', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5820 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5821 'Transcode' : '1.2.840.10008.1.2.4.50', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5822 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5823 self.assertEqual(1, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5824 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5825 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5826 z = PostArchive(_REMOTE, '/tools/create-media', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5827 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5828 'Transcode' : '1.2.840.10008.1.2.4.51', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5829 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5830 self.assertEqual(2, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5831 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5832 |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5833 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5834 'Resources' : [ info['ParentStudy'] ], |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5835 'Transcode' : '1.2.840.10008.1.2.4.57', |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5836 }) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5837 self.assertEqual(2, len(z.namelist())) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5838 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
5839 |
308 | 5840 |
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5841 def test_modify_keep_source(self): |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5842 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5843 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5844 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5845 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5846 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5847 'Replace' : { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5848 'StationName' : 'TEST', |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5849 }, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5850 'KeepSource' : True, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5851 }) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5852 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5853 s = DoGet(_REMOTE, '/studies') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5854 self.assertEqual(2, len(s)) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5855 self.assertTrue(i['ParentStudy'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5856 self.assertTrue(j['ID'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5857 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5858 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5859 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5860 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5861 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5862 'Replace' : { |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5863 'StationName' : 'TEST', |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5864 }, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5865 'KeepSource' : False, |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5866 }) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5867 |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5868 s = DoGet(_REMOTE, '/studies') |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5869 self.assertEqual(1, len(s)) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5870 self.assertFalse(i['ParentStudy'] in s) |
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
5871 self.assertTrue(j['ID'] in s) |
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5872 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5873 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5874 def test_modify_transcode_study(self): |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5875 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5876 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5877 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5878 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5879 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5880 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5881 'Transcode' : '1.2.840.10008.1.2.4.50', |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5882 'KeepSource' : False |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5883 }) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5884 |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5885 k = DoGet(_REMOTE, '/instances') |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5886 self.assertEqual(1, len(k)) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5887 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5888 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5889 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
5890 |
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5891 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5892 def test_store_peer_transcoding(self): |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5893 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5894 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5895 SYNTAXES = [ |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5896 '1.2.840.10008.1.2', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5897 '1.2.840.10008.1.2.1', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5898 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5899 '1.2.840.10008.1.2.2', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5900 '1.2.840.10008.1.2.4.50', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5901 '1.2.840.10008.1.2.4.51', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5902 '1.2.840.10008.1.2.4.57', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5903 '1.2.840.10008.1.2.4.70', |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5904 ] |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5905 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5906 if HasGdcmPlugin(_REMOTE): |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5907 SYNTAXES = SYNTAXES + [ |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5908 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5909 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5910 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5911 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5912 ] |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5913 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5914 for syntax in SYNTAXES: |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5915 body = { |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5916 'Resources' : [ i ], |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5917 } |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5918 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5919 if syntax != '1.2.840.10008.1.2.1': |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5920 body['Transcode'] = syntax |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5921 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5922 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5923 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5924 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5925 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5926 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5927 self.assertEqual(syntax, GetTransferSyntax( |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5928 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5929 |
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
5930 DropOrthanc(_LOCAL) |
308 | 5931 |
5932 | |
295 | 5933 def test_getscu(self): |
307 | 5934 def CleanTarget(): |
5935 if os.path.isdir('/tmp/GETSCU'): | |
5936 shutil.rmtree('/tmp/GETSCU') | |
5937 os.makedirs('/tmp/GETSCU') | |
5938 | |
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5939 env = {} |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5940 if _DOCKER: |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5941 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5942 # and running in a GNU/Linux distribution running DCMTK |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5943 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5944 env['DCMDICTPATH'] = '/usr/share/libdcmtk2/dicom.dic' |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5945 |
295 | 5946 # no transcoding required |
307 | 5947 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
5948 | |
5949 CleanTarget() | |
295 | 5950 |
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5951 subprocess.check_call([ |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5952 FindExecutable('getscu'), |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5953 _REMOTE['Server'], |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5954 str(_REMOTE['DicomPort']), |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5955 '-aec', 'ORTHANC', |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5956 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
307 | 5957 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5958 '-k', '0008,0052=STUDY', |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5959 '--output-directory', '/tmp/GETSCU/' |
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
296
diff
changeset
|
5960 ], env = env) |
295 | 5961 |
311 | 5962 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
5963 self.assertTrue(os.path.isfile(f1)) | |
5964 with open(f1, 'rb') as f: | |
5965 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
5966 | |
307 | 5967 CleanTarget() |
295 | 5968 |
5969 # transcoding required | |
311 | 5970 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
307 | 5971 |
5972 subprocess.check_call([ | |
5973 FindExecutable('getscu'), | |
5974 _REMOTE['Server'], | |
5975 str(_REMOTE['DicomPort']), | |
5976 '-aec', 'ORTHANC', | |
5977 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
311 | 5978 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
307 | 5979 '-k', '0008,0052=STUDY', |
5980 '--output-directory', '/tmp/GETSCU/' | |
5981 ], env = env) | |
5982 | |
311 | 5983 self.assertTrue(os.path.isfile(f1)) |
5984 with open(f1, 'rb') as f: | |
5985 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
5986 | |
5987 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
5988 # (LittleEndianExplicit is proposed by default by "getscu") | |
5989 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
5990 self.assertTrue(os.path.isfile(f2)) | |
5991 with open(f2, 'rb') as f: | |
5992 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
324
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5993 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5994 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5995 def test_findscu_truncation(self): |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5996 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5997 # Fixed by: https://hg.orthanc-server.com/orthanc/rev/2724977419fb |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5998 UploadInstance(_REMOTE, 'Multiframe.dcm') |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
5999 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6000 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6001 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6002 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6003 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6004 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6005 self.assertEqual(2, len(result)) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6006 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6007 # The "StudyInstanceUID" is set as a list of 5 times the same |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6008 # study, leading to a string of 249 characters |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6009 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6010 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6011 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6012 self.assertEqual(1, len(result)) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6013 |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6014 # The "StudyInstanceUID" is set as a list of 6 times the same |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6015 # study, leading to a string of 299 characters. In Orthanc <= |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6016 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6017 # == 256, and is thus wiped out by C-FIND SCP. As a |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6018 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6019 # "StudyInstanceUID" and returns all the available |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6020 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6021 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6022 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6023 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6024 self.assertEqual(1, len(result)) |
328
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6025 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6026 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6027 def test_store_compressed(self): |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6028 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6029 dicom = f.read() |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6030 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6031 sourceSize = len(dicom) |
324
6164d39399ad
test_findscu_truncation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
323
diff
changeset
|
6032 |
328
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6033 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6034 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6035 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6036 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6037 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6038 _REMOTE, '/peers/peer/store', { |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6039 'Resources' : [ i ], |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6040 'Synchronous' : False, |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6041 })) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6042 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6043 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6044 self.assertFalse(job['Content']['Compress']) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6045 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6046 self.assertEqual(str(sourceSize), job['Content']['Size']) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6047 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6048 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6049 DropOrthanc(_LOCAL) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6050 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6051 # Sending to the local Orthanc 0.8.6 server, with compression: |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6052 # Not supported by Orthanc 0.8.6 => failure |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6053 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6054 'Resources' : [ i ], |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6055 'Compress' : True, |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6056 })) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6057 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6058 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6059 # Sending to the tested remote server, with compression: OK |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6060 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6061 _REMOTE, '/peers/self/store', { |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6062 'Resources' : [ i ], |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6063 'Compress' : True, |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6064 'Synchronous' : False, |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6065 })) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6066 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6067 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6068 self.assertTrue(job['Content']['Compress']) |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6069 |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6070 # Compression must have divided the size of the sent data at least twice |
8a462f9c5a97
test_store_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
327
diff
changeset
|
6071 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
332 | 6072 |
6073 | |
6074 def test_move_ambra(self): | |
6075 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
6076 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
6077 | |
6078 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
6079 | |
6080 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6081 '--study', | |
6082 '-k', 'StudyInstanceUID=' | |
6083 ]))) | |
6084 | |
6085 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6086 '--study', | |
6087 '-k', 'AccessionNumber=', | |
6088 ]))) | |
6089 | |
6090 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6091 '--study', | |
6092 '-k', 'AccessionNumber=', | |
6093 '-k', 'StudyInstanceUID=' | |
6094 ]))) | |
6095 | |
6096 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6097 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6098 '--study', | |
6099 '-k', 'AccessionNumber=CT16000988', | |
6100 '-k', 'StudyInstanceUID=', | |
6101 ]))) | |
6102 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6103 DropOrthanc(_LOCAL) | |
6104 | |
6105 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6106 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6107 '--study', | |
6108 '-k', 'AccessionNumber=CT16000988', | |
6109 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
6110 ]))) | |
6111 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6112 DropOrthanc(_LOCAL) | |
6113 | |
6114 # This fails on Orthanc <= 1.7.3 | |
6115 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
6116 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
6117 '--study', | |
6118 '-k', 'AccessionNumber=', | |
6119 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
6120 ]))) | |
6121 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
6122 DropOrthanc(_LOCAL) | |
333
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6123 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6124 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6125 def test_decode_elscint(self): |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6126 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6127 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6128 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6129 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6130 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6131 self.assertEqual("L", im.mode) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6132 self.assertEqual(512, im.size[0]) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6133 self.assertEqual(512, im.size[1]) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6134 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6135 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6136 self.assertEqual("L", im.mode) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6137 self.assertEqual(512, im.size[0]) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6138 self.assertEqual(512, im.size[1]) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6139 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6140 # The two tests below fail on Orthanc <= 1.7.3 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6141 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6142 self.assertEqual(512 * 512 * 2, len(raw)) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6143 |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6144 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6145 self.assertEqual(512 * 512 * 2, len(raw)) |
695be643b0f4
test_decode_elscint
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
332
diff
changeset
|
6146 |
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6147 |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6148 def test_rest_modalities_in_study_2(self): |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6149 # Problem reported by Alain Mazy on 2020-09-15 |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6150 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6151 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6152 |
335
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6153 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6154 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6155 self.assertEqual(1, len(modalitiesInStudy)) |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6156 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6157 |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6158 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6159 # The empty string '' corresponds to universal matching. |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6160 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6161 |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6162 if i in [ 'UX', 'UX\\MR' ]: |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6163 expected = 0 |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6164 else: |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6165 expected = 1 |
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6166 |
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6167 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6168 'Query' : { 'ModalitiesInStudy' : i }}) |
335
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6169 self.assertEqual(expected, len(a)) |
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6170 |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6171 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
6172 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
335
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
6173 self.assertEqual(expected, len(studyInstanceUid)) |
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6174 |
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6175 |
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6176 def test_webdav(self): |
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6177 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6178 |
342
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6179 for suffix in [ '', '/' ]: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6180 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6181 self.assertEqual(1, len(f)) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6182 self.assertTrue('/webdav/' in f.keys()) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6183 self.assertTrue(f['/webdav/']['folder']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6184 self.assertEqual('webdav', f['/webdav/']['displayname']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6185 |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6186 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6187 self.assertEqual(6, len(f)) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6188 self.assertTrue(f['/webdav/']['folder']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6189 self.assertEqual('webdav', f['/webdav/']['displayname']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6190 |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6191 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6192 self.assertTrue(f['/webdav/%s' % i]['folder']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6193 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6194 |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6195 for depth in [ 0, 1 ]: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6196 for suffix2 in [ '', '/' ]: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6197 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6198 |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6199 if i == 'uploads': |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6200 # Empty folders might still exist in "/uploads/" |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6201 self.assertTrue('/webdav/uploads/' in g) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6202 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6203 for j in g.items(): |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6204 self.assertTrue(g.items()[0][1]['folder']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6205 else: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6206 self.assertEqual(1, len(g)) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6207 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6208 self.assertTrue(g.items()[0][1]['folder']) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6209 self.assertEqual(i, g.items()[0][1]['displayname']) |
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
337
diff
changeset
|
6210 |
342
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6211 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6212 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6213 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6214 |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6215 while len(DoGet(_REMOTE, '/patients')) == 0: |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6216 time.sleep(0.01) |
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
6217 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
6218 |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6219 |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6220 def test_log_categories(self): |
350 | 6221 original = DoGet(_REMOTE, '/tools/log-level-http') |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6222 |
350 | 6223 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
6224 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6225 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6226 |
350 | 6227 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
6228 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6229 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6230 |
350 | 6231 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
6232 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6233 DoGet(_REMOTE, '/system') |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6234 |
350 | 6235 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6236 |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6237 # Switch back to the original log level |
350 | 6238 DoPut(_REMOTE, '/tools/log-level-http', original) |
6239 | |
6240 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6241 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6242 |
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
6243 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
357 | 6244 |
6245 | |
6246 def test_upload_zip(self): | |
6247 f = StringIO() | |
6248 with zipfile.ZipFile(f, 'w') as z: | |
6249 z.writestr('hello/world/invalid.txt', 'Hello world') | |
6250 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
6251 c = g.read() | |
6252 z.writestr('hello/world/dicom1.dcm', c) | |
6253 z.writestr('hello/world/dicom2.dcm', c) | |
6254 | |
6255 f.seek(0) | |
6256 i = DoPost(_REMOTE, '/instances', f.read()) | |
6257 | |
6258 self.assertEqual(2, len(i)) | |
6259 self.assertEqual(i[0], i[1]) | |
6260 self.assertEqual(6, len(i[0])) | |
6261 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
6262 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
6263 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
6264 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
6265 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
6266 | |
6267 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
6268 self.assertEqual('Success', i[0]['Status']) | |
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6269 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6270 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6271 def test_transfer_syntax_no_metaheader(self): |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6272 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6273 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6274 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6275 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6276 # This fails on Orthanc <= 1.8.1 |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6277 self.assertTrue('TransferSyntax' in m) |
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
6278 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6279 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6280 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6281 def test_upload_multipart_1(self): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6282 # This tests the "Upload" button in Orthanc Explorer |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6283 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6284 def EncodeChunk(data, boundary, filename): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6285 return (('--%s\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6286 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6287 '\r\n%s\r\n') % (boundary, filename, data)) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6288 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6289 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6290 dcm1 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6291 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6292 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6293 dcm2 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6294 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6295 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6296 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6297 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6298 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6299 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6300 '--' + boundary + '--'), headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6301 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6302 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6303 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6304 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6305 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6306 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6307 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6308 def test_upload_multipart_2(self): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6309 # This tests the "maxChunkSize" option of "jQuery File Upload |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6310 # 5.12", whose source code can be found in: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6311 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6312 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6313 def EncodeBody(data, boundary, filename): |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6314 return (('--%s\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6315 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6316 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6317 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6318 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6319 dcm = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6320 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6321 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6322 dcm2 = f.read() |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6323 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6324 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6325 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6326 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6327 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6328 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6329 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6330 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6331 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6332 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6333 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6334 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6335 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6336 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6337 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6338 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6339 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6340 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6341 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6342 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6343 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6344 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6345 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6346 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6347 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6348 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6349 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6350 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6351 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6352 'X-File-Name' : 'ColorTestMalaterre.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6353 'X-File-Size' : str(len(dcm2)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6354 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6355 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6356 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6357 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6358 # Upload the last chunk => the file is now entirely available |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6359 m = DoPost(_REMOTE, '/instances', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6360 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6361 headers = { |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6362 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6363 'X-Requested-With' : 'XMLHttpRequest', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6364 'X-File-Name' : 'DummyCT.dcm', |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6365 'X-File-Size' : str(len(dcm)), |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6366 }) |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6367 |
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
6368 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6369 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6370 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6371 def test_pixel_data_offset(self): |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6372 # New in Orthanc 1.9.1 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6373 def Check(path, offset): |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6374 i = UploadInstance(_REMOTE, path) ['ID'] |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6375 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6376 self.assertEqual(offset, metadata) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6377 |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6378 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6379 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6380 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6381 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6382 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6383 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6384 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6385 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6386 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6387 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6388 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6389 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
6390 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |